Ec-28_000450.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-28_000450.1
Unique NameEc-28_000450.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length186
Homology
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BLAST of Ec-28_000450.1 vs. uniprot
Match: D7FIJ0_ECTSI (Dynactin 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIJ0_ECTSI)

HSP 1 Score: 384 bits (986), Expect = 3.890e-132
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 2 
Query:   98 MAGSAQEEYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRYCVVGEGTVIRPAYRIEQEESNLKCRFTPLSVGSHTYIGKSCVVESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVSVLHESTPSVWTEDAVNFYETFEPSAVVTPK 652
            MAGSAQEEYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRYCVVGEGTVIRPAYRIEQEESNLKCRFTPLSVGSHTYIGKSCVVESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVSVLHESTPSVWTEDAVNFYETFEPSAVVTPK
Sbjct:    1 MAGSAQEEYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRYCVVGEGTVIRPAYRIEQEESNLKCRFTPLSVGSHTYIGKSCVVESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVSVLHESTPSVWTEDAVNFYETFEPSAVVTPK 185
[Close]
BLAST of Ec-28_000450.1 vs. uniprot
Match: A0A7S2V2Q0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2Q0_9STRA)

HSP 1 Score: 154 bits (389), Expect = 4.340e-42
Identity = 74/175 (42.29%), Postives = 115/175 (65.71%), Query Frame = 2 
Query:  113 QEEYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRYCVVGEGTVIRPAYRIEQEESNLKCRFTPLSVGSHTYIGKSCVVESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVSVLHESTPSVWTEDAVNFYETFEPSA 637
            +EE+++T   ++V KK  +   + + + G++I+M GVIIRG+L ++ +GRYC VG  T+IRPA +I +E +     F  + +G +T IG+ C++E+A IG NV+     VLG+ S VRD C L  GTVL  GAVVPPF+V+ GCP R+ S L E++P  ++  A + Y+ F+ +A
Sbjct:    9 KEEFIRTTTNNLVSKKVRISSPNFVKITGKTILMHGVIIRGDLAKVEMGRYCEVGANTIIRPALKISEEPT-----FADVKIGDNTRIGEDCIIEAAWIGTNVQXXXXXVLGKGSLVRDCCRLEDGTVLAPGAVVPPFSVVAGCPGRVTSELPENSPEEFSHAAQDSYKKFKETA 178
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BLAST of Ec-28_000450.1 vs. uniprot
Match: A0A7S3QBQ9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QBQ9_9STRA)

HSP 1 Score: 150 bits (378), Expect = 9.960e-40
Identity = 74/187 (39.57%), Postives = 112/187 (59.89%), Query Frame = 2 
Query:  113 QEEYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRYCVVGEGTVIRP-AYRI-------------EQEESNLKCRFTPLSVGSHTYIGKSCVVESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVS--VLHESTPSVWTEDAVNFYETF 625
            +E YVKT   + V +KA +HG  N+ + G+SI+ P V IRG+ Q +RIGRYC +GEG+++RP +Y+              E EE     +F PL VGSHT IGK CV+E+A +G +V I D CV+ +   ++D C++  GTV+ +  V+PPF+ + GCP  M+   ++ ES  +   +D V  +  F
Sbjct:   44 EEGYVKTAAYNYVSRKAFIHGAKNVEMKGKSIVHPKVHIRGDFQTVRIGRYCHIGEGSILRPPSYQASLDTSHEGASENGENEEEKQLIKFLPLIVGSHTQIGKGCVIEAAAVGSSVYIGDNCVISKRVIIKDCCYIASGTVIAQDTVIPPFSRVAGCPGGMIENGLMAESITTTSVDDCVEQFNEF 230
[Close]
BLAST of Ec-28_000450.1 vs. uniprot
Match: A0A7S1ZJQ9_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZJQ9_TRICV)

HSP 1 Score: 146 bits (369), Expect = 7.180e-39
Identity = 69/173 (39.88%), Postives = 110/173 (63.58%), Query Frame = 2 
Query:  110 AQEEYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGEL-QEIRIGRYCVVGEGTVIRPAYRIEQEESNLKCRFTPLSVGSHTYIGKSCVVESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVSVLHESTPSVWTEDAVNFYETF 625
            A+E Y+KT   + V + A +HG  ++ + G+S++ PG ++RG+L   +R+GRYC VG+ +V+RP      + +    R  P S+G+HT IG+ CVVE+A +G +V + DGCVLG+ S ++D C + PGTVL   AVVPPF+++ G P R+V  + ES  +   + ++  Y  F
Sbjct:   17 AEEGYIKTAANNYVSRSASIHGSRHVEIRGKSVVRPGAVVRGDLGAPVRVGRYCRVGDRSVLRPPSASLPDGTE---RRLPQSIGNHTSIGRDCVVEAAAVGFSVLVGDGCVLGKRSVIKDCCRIEPGTVLAPDAVVPPFSIVSGSPGRVVGEMPESAAAEIPDRSLGEYAAF 186
[Close]
BLAST of Ec-28_000450.1 vs. uniprot
Match: A0A0L0DIQ2_THETB (Dynactin subunit 5 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DIQ2_THETB)

HSP 1 Score: 144 bits (363), Expect = 3.460e-38
Identity = 69/173 (39.88%), Postives = 110/173 (63.58%), Query Frame = 2 
Query:  116 EEYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRYCVVGEGTVIRPAYRIEQEESNLKCRFTPLSVGSHTYIGKSCVVESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVSVLHESTPSVWTEDAVNFYETFEPS 634
            EE+++T  G+ V + + + G  N+ L G+S+++PG IIRG+L  +RIGRYCV+ +  V+RPAY+   +  N    +  LS+G   Y+GK  VVE+A IG +V I +G ++ + + + D C +LPG V+PE AV+PPF++  G PA ++  L E+   V  E A   YE++ P+
Sbjct:    9 EEWIETASGNKVSRASVLCGSQNIILNGKSLVLPGSIIRGDLAAVRIGRYCVISDRVVLRPAYKALPKGLN----YFQLSLGDCVYVGKDAVVEAASIGSHVIIGEGAIVSKRAVILDCCEILPGAVVPEDAVIPPFSIYGGNPAVLIGELTEAAQRVHEEKAFACYESYVPA 177
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BLAST of Ec-28_000450.1 vs. uniprot
Match: A0A0N4UAM7_DRAME (Uncharacterized protein n=1 Tax=Dracunculus medinensis TaxID=318479 RepID=A0A0N4UAM7_DRAME)

HSP 1 Score: 141 bits (355), Expect = 6.060e-37
Identity = 65/171 (38.01%), Postives = 106/171 (61.99%), Query Frame = 2 
Query:  113 QEEYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRYCVVGEGTVIRPAYRIEQEESNLKCRFTPLSVGSHTYIGKSCVVESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVSVLHESTPSVWTEDAVNFYETF 625
            ++E+V+T  G+ V KK+ + G  N+ L G+SI+M   I+RG++  IR G+YCVVGE TVIRP+Y+      +    F P+ +G H +I   C++ +A IG  V I  G ++GR+  ++D   +LP   +P  AV+PPF+++ G P  ++  L EST ++ T+   +FY+ F
Sbjct:   10 KQEFVETATGNKVNKKSRLFGSQNIVLNGKSILMKDCILRGDMNSIRAGKYCVVGERTVIRPSYK----RFSKGLTFFPVHIGDHVFIENDCIIMAAQIGAFVHIGSGAIVGRSVIIKDCVQVLPNAFVPHDAVIPPFSIVSGNPGTIIGELPESTQNLMTQATRSFYDNF 176
[Close]
BLAST of Ec-28_000450.1 vs. uniprot
Match: A0A3S1H5M8_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S1H5M8_ELYCH)

HSP 1 Score: 136 bits (343), Expect = 3.160e-35
Identity = 63/171 (36.84%), Postives = 103/171 (60.23%), Query Frame = 2 
Query:  119 EYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRYCVVGEGTVIRPAYRIEQEESNLKCRFTPLSVGSHTYIGKSCVVESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVSVLHESTPSVWTEDAVNFYETFEP 631
            +Y++T  G+ V +++ + G  N+ + G++I+M G +IRG+L  +RIGR+C++    VIRPA++      +    F PL +G H  I ++ VV +A +G  V I   CV+GR + ++D C +   T+LP  AVVPPFT+  G P ++ S L + T  + T+  VN+Y  F P
Sbjct:   12 QYIETASGNKVSRQSVLCGSQNIVINGKTIVMTGCVIRGDLANVRIGRHCIISNNAVIRPAFK----RFSKGVAFFPLHIGDHVLIEENSVVNAAQVGSFVHIGKNCVIGRRAVLKDCCAIADNTILPPEAVVPPFTLCSGSPGKLTSELPDCTQDLMTDITVNYYHHFRP 178
[Close]
BLAST of Ec-28_000450.1 vs. uniprot
Match: A0A0K0JQM9_BRUMA (BMA-DNC-5 n=14 Tax=Spiruromorpha TaxID=2072716 RepID=A0A0K0JQM9_BRUMA)

HSP 1 Score: 134 bits (338), Expect = 1.710e-34
Identity = 65/175 (37.14%), Postives = 101/175 (57.71%), Query Frame = 2 
Query:  113 QEEYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRYCVVGEGTVIRPAYRIEQEESNLKCRFTPLSVGSHTYIGKSCVVESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVSVLHESTPSVWTEDAVNFYETFEPSA 637
            + EYV+T  G+ V +K+ + G  N+ L G+S +M   I+RG++  IR GRYCVVGE T+IRP+Y+      +    F P+ +G H +IG  C+V +A IG  V          +  ++    +LP TV+P  AV+PPF+++ G P  ++  L EST  + T+   NFY+ F P +
Sbjct:    6 KSEYVETATGNKVNRKSRLFGSQNIVLNGKSTLMKDCILRGDMHNIRTGRYCVVGERTIIRPSYK----RFSKGLTFFPVHIGDHVFIGNDCIVMAAEIGAFVHXXXXXXXXXSVIIKSCVQVLPNTVVPHDAVIPPFSIVGGNPGTVIGHLPESTQELMTQATRNFYDNFVPDS 176
[Close]
BLAST of Ec-28_000450.1 vs. uniprot
Match: A0A0N4UWP5_ENTVE (Uncharacterized protein n=1 Tax=Enterobius vermicularis TaxID=51028 RepID=A0A0N4UWP5_ENTVE)

HSP 1 Score: 132 bits (331), Expect = 1.880e-33
Identity = 65/171 (38.01%), Postives = 106/171 (61.99%), Query Frame = 2 
Query:  125 VKTRDGDIVFKKA-HVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRYCVVGEGTVIRPAYRIEQEESNLKCRFTPLSVGSHTYIGKSCVVESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVSVLHESTPSVWTEDAVNFYETFEPS 634
            V+T  G+ V ++  H+ G  N+ L G+SIIM G I+RG+L  +RIG+YCV+GE ++IRP+++   +       + P+ +G + +I   CVV +A IG  V I    ++GR++ ++D   +LP  V+P+ AV+PPF+++ G PA +V  L  ST  +  +   +FYE F PS
Sbjct:   14 VETATGNKVSRRGTHLFGSTNIVLSGKSIIMDGCILRGDLNSVRIGKYCVIGERSIIRPSFKAFSKGLT----YFPVHIGDYVFIENDCVVMAAQIGSFVHIGSNAIIGRSTVLKDCVQILPDAVIPQDAVIPPFSIVGGNPAVIVGELPPSTQDLMMQANKSFYENFVPS 180
[Close]
BLAST of Ec-28_000450.1 vs. uniprot
Match: A0A835Z209_9STRA (Dynactin 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z209_9STRA)

HSP 1 Score: 132 bits (331), Expect = 2.570e-33
Identity = 71/184 (38.59%), Postives = 98/184 (53.26%), Query Frame = 2 
Query:  110 AQEEYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRYCVVGEGTVIRPAYRIEQ-------EESNLKC----RFTPLSVGSHTYIGKSCVVESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVSVLHESTPSVWTEDAVNFYETFE 628
            A E+YV+T   ++V +KA VHG  N+ + G+ I+MPGV + G+L  IR GRYC+V EG+ IRP  R+EQ        ++N K       TP+ VG+HT+IG+ CVVE+A IGCNV + DGCV                           FT + G P   V  + ES   V  E A+ F+  F+
Sbjct:    9 AAEDYVRTTTNNLVSRKATVHGPQNVSIKGKGIVMPGVTLHGDLATIRFGRYCLVDEGSTIRPGVRLEQGSGAAAAADANAKAAVTRHHTPMLVGNHTHIGRGCVVEAAAIGCNVTVGDGCVXXXXXXXXXXXXXXXXXXXXXXXXXXXFTRVHGKPGLAVGEVPESFAVVQPERAIAFFNNFK 192
The following BLAST results are available for this feature:
BLAST of Ec-28_000450.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIJ0_ECTSI3.890e-132100.00Dynactin 4 n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A7S2V2Q0_9STRA4.340e-4242.29Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3QBQ9_9STRA9.960e-4039.57Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S1ZJQ9_TRICV7.180e-3939.88Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A0L0DIQ2_THETB3.460e-3839.88Dynactin subunit 5 n=1 Tax=Thecamonas trahens ATCC... [more]
A0A0N4UAM7_DRAME6.060e-3738.01Uncharacterized protein n=1 Tax=Dracunculus medine... [more]
A0A3S1H5M8_ELYCH3.160e-3536.84Uncharacterized protein n=1 Tax=Elysia chlorotica ... [more]
A0A0K0JQM9_BRUMA1.710e-3437.14BMA-DNC-5 n=14 Tax=Spiruromorpha TaxID=2072716 Rep... [more]
A0A0N4UWP5_ENTVE1.880e-3338.01Uncharacterized protein n=1 Tax=Enterobius vermicu... [more]
A0A835Z209_9STRA2.570e-3338.59Dynactin 4 n=1 Tax=Tribonema minus TaxID=303371 Re... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:474237..477586 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score383.6
Seed ortholog evalue5.1e-104
Seed eggNOG ortholog2880.D7FIJ0
Preferred nameDCTN5
Length1102
KEGG koko:K10427
KEGG Pathwayko04962,map04962
Hectar predicted targeting categoryother localisation
Gene idEc-28_000450.1
GOsGO:0000003,GO:0001568,GO:0001944,GO:0002376,GO:0002478,GO:0002495,GO:0002504,GO:0003205,GO:0003231,GO:0003279,GO:0003281,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005869,GO:0005875,GO:0005886,GO:0006810,GO:0006888,GO:0006928,GO:0007017,GO:0007018,GO:0007275,GO:0007276,GO:0007283,GO:0007507,GO:0008088,GO:0008090,GO:0008150,GO:0009987,GO:0010970,GO:0012505,GO:0015629,GO:0015630,GO:0016020,GO:0016192,GO:0019882,GO:0019884,GO:0019886,GO:0019953,GO:0022414,GO:0030705,GO:0031090,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0035904,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0046907,GO:0048002,GO:0048193,GO:0048232,GO:0048513,GO:0048609,GO:0048731,GO:0048856,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051704,GO:0060840,GO:0060976,GO:0070013,GO:0071944,GO:0072358,GO:0072359,GO:0098930,GO:0099111
EggNOG free text desc.aorta development
EggNOG OGsKOG3121@1,KOG3121@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036,ko04812
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_000450Ec-28_000450Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_28 474237..477586 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000450.1Ec-28_000450.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_28 474683..477488 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000450.1.5Ec-28_000450.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 474237..474805 -
Ec-28_000450.1.4Ec-28_000450.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 475040..475126 -
Ec-28_000450.1.3Ec-28_000450.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 475649..475787 -
Ec-28_000450.1.2Ec-28_000450.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 476276..476379 -
Ec-28_000450.1.1Ec-28_000450.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 477384..477586 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0004503UTR:Ec-28_000450.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_28 474237..474682 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000450.1CDS:Ec-28_000450.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_28 474683..474805 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0004505UTR:Ec-28_000450.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_28 477489..477586 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-28_000450.1 ID=Ec-28_000450.1|Name=Ec-28_000450.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=186bp
MAGSAQEEYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQE
IRIGRYCVVGEGTVIRPAYRIEQEESNLKCRFTPLSVGSHTYIGKSCVVE
SAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCP
ARMVSVLHESTPSVWTEDAVNFYETFEPSAVVTPK*
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spliced messenger RNA

>Ec-28_000450.1 ID=Ec-28_000450.1|Name=Ec-28_000450.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1102bp|location=Sequence derived from alignment at chr_28:474237..477586- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
TCCTCTCTCTCACCTGCTGTATTGGGTATTGGGTGTGTGTACGTGCTTAC
ACACATGTATCTGAGCTGTGCGTTGCTGATATAGGAAGGATAACGGCTAT
GGCAGGATCTGCGCAAGAAGAGTACGTGAAGACCCGCGATGGCGACATTG
TCTTCAAGAAAGCTCACGTCCACGGCTTGCACAACCTATTTCTCATGGGA
AGGAGCATCATCATGCCAGGGGTAATCATCCGCGGAGAACTACAGGAGAT
CCGAATAGGTCGGTACTGCGTCGTTGGCGAAGGCACCGTCATCCGACCAG
CTTACAGGATTGAACAAGAGGAGTCTAACCTCAAGTGTCGCTTCACCCCG
CTATCTGTGGGTAGCCACACCTATATCGGCAAGTCCTGCGTCGTAGAATC
GGCTGGCATTGGGTGCAACGTGCGGATCGAGGATGGATGCGTTTTGGGAC
GGAATAGTTTTGTTAGGGACAACTGCCATCTGTTGCCGGGGACGGTTCTT
CCTGAAGGGGCCGTGGTCCCCCCCTTTACTGTGCTCCAGGGCTGCCCGGC
GAGGATGGTGTCAGTGCTACATGAGAGCACGCCGTCGGTGTGGACGGAGG
ACGCCGTGAACTTCTACGAAACTTTCGAGCCGAGCGCTGTTGTGACACCC
AAATGACCCTTGCCTGTGGCCCGTATCTCCCCCAAACTTTTTTGAACGCA
CGCCCACAATGCCAATTCCAGCTCTTTCTCGTGGCTATGTATGTGTGTGA
CGTTGCAGTGCGAGCTCTGTCTACGACGCTGTTGTTTGATCTGCAGCCTC
CATGCCGATGTCTGTTCGCGAAACATGCCGAACAATTGTTTATGTTCACC
TTTAGTATCACAATCTCTGCCTAGAAACTTGCCCGGTCTGTTCAGTGTCC
ACCGCAGTTCATGTGGCCATGGATTTTGTTTGACGGGAAGCGAGTTCACT
CTGTGTGTAGATCTTTCTTCTGGTGATTTCCTGCCCGATTCGGTCTCACG
TTCTTTTACTTTCCCGTAGAGAGTGATTTACTCGGCTGTCGGTGTTTTAG
CTGTAGCTGTACTGGTGATCAAGTCCAAAATGTCAAACACCTACTGAATC
TG
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protein sequence of Ec-28_000450.1

>Ec-28_000450.1 ID=Ec-28_000450.1|Name=Ec-28_000450.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=186bp
MAGSAQEEYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQE
IRIGRYCVVGEGTVIRPAYRIEQEESNLKCRFTPLSVGSHTYIGKSCVVE
SAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCP
ARMVSVLHESTPSVWTEDAVNFYETFEPSAVVTPK*
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mRNA from alignment at chr_28:474237..477586-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-28_000450.1 ID=Ec-28_000450.1|Name=Ec-28_000450.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3350bp|location=Sequence derived from alignment at chr_28:474237..477586- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
TCCTCTCTCTCACCTGCTGTATTGGGTATTGGGTGTGTGTACGTGCTTAC
ACACATGTATCTGAGCTGTGCGTTGCTGATATAGGAAGGATAACGGCTAT
GGCAGGATCTGCGCAAGAAGAGTACGTGAAGACCCGCGATGGCGACATTG
TCTTCAAGAAAGCTCACGTCCACGGCTTGCACAACCTATTTCTCATGGGA
AGGGTAAGACATCAACTTGATTTGATGCGACGTTTGCATGTACACACCTC
GTCCCCGCACAGGCGTTCGTTATATATGTACCATGAGCTGCAAATGACAG
CAGTGAACTGTAGATATTGGTGTACCACCCTCCACCGCTACCAAATTTAG
CAGCAGTTTGGGGCCGCAATGTTGCCCCCCAACAGTCTGGATCTCGGTCT
ACTGCTGTACATGTACGGCAGTAGTCTAGCCATCGGACCATCGGACAGCG
TGAATGTAGCGTGTTTCAGGGCTACCATGAGACCTATGCATATCATGAGA
CCGAAGCGGTGGGGGTACATATCGTGTGCACGCCACCGGTGGGGCATCAA
GCCTTATTCACCCTCACCACCACCGAGAAGAAACACGGACAACGAAGGTA
AAAGAAGTACCATGTAGTCTTGTACAGAACGGCGGATGCAATCATAATCA
TCGCACACACAGCACAGCGGTGGAAGCGAGGACAAACAGCGTAGGGAGGG
GACAACCCACAAAGAGCAAAGATCCCTCCGCCCCAAACCCGTGAAACATA
AACTGGTACGTCTTGTTGCTCATGGTTTCTGTGCGCTACCTTGTAGCAGC
GCACCCCATCGCACCCGCGCGCCCGCTCATTTGAGACAAAGCTGGAGTAT
GTGTGTACCAGAACGACTATTCTGCGGCATGGATCTGATGCGGTATTGCG
GAGGCGTGTTTCCAAGCTGTAGCTGGTGATAAGTGCAGCTTGACCATCTC
TGTGTGGCACATTGCAATCAATCAATCTGTCTTGTTCATCTGCATATCTA
ACCTACACAGCACTTCTCGAATTGCTTGCTCGCGGTACTTCATGTACACA
AACCGACATCGCGGTTGAGTGCATTGGTCGTTCAAACACCCACGAAGGCT
GCCGCTCATAGCCCCCCTGTTGGGGGTTGGGGGTATTTTAATCACGGATG
GTTTCGTTCCCAATCCGATTTGTCTGCGTTGACGAAATTCCATCTGCTCT
TCATCAGAGCATCATCATGCCAGGGGTAATCATCCGCGGAGAACTACAGG
AGATCCGAATAGGTCGGTACTGCGTCGTTGGCGAAGGCACCGTCATCCGA
CCAGCTTACAGGTAAGCAGGAATACGTGTACCCTGGCTCGTTATTAAGTA
GGTCTTTTCGATGGAGAAACTCTTCCAACAGCGTGGCGACTTGATCAAAT
ACCTCCGGTTTTCACAGCACAATGCGCCGCCAGCAAGTCAGCTACTCGCC
GCGAGGGTAGCTTGATCTACTACTGTCTAGGGTGGGCCCCTCACGGTCCT
CTGATCAGCACGATGCGCTTGCCAATTTATGACCCTGAACCATTTACAAT
GGGTTGCTGGATTATTTTCCAGCAGCACGAGCTGGGTTGGGAGGGCCGCA
TGCCTTACTGATCGTGTAGGGTGTTGGCGCTGGCCTCCACCAACGGTGCT
TTCCGAGCTACGCGATCCCTTGCACGTTTGCGTCGTTTGTTTACTGTTGG
CGCCCGGTGTGTGTTCCTCCCTCCGGTCGAGAACCCGCTCATACCTTCGT
TTTCCGAAGACTGTCAACCAAATAACGTGTTGGTTCTTCTTGCTGACAGG
ATTGAACAAGAGGAGTCTAACCTCAAGTGTCGCTTCACCCCGCTATCTGT
GGGTAGCCACACCTATATCGGCAAGTCCTGCGTCGTAGAATCGGCTGGCA
TTGGGTGCAACGTGCGGATCGAGGATGGATGCGTTTTGGTGAGGGTAGAA
GGTTGATGTTGCCTCTTTTCCTGTAGGAGCTGCAACCCTACTGTTGTAGT
CCAAAGCTTGAAACATGATGCTTGCTGCAATGCTTGTTTTGATGGATAGA
AAGCCACGACACTTCTGCTGACCAGAGTCAGAACCGGCATGAATCTGGCC
GGTTTTTGCGCAACACGTGCTTGCTGAAAAGGTCTTCTGGGCATAATGTG
TTGCTGGTCGTGTATTAGGGCAGGCGGTGCTATTCTTATGGAAGGTCGAG
GTGGTATTATGCACGATTACTTACACACGGTTCTTTGATGCCCCCAACGC
TCGAGCGCTTTCAGGAAAACTCGGTCCGAGATATTTGTGGTCCCTGTTCG
CCCATTCTCGGACTATGCAACAGCAGACAGGTCGCAATTATTTTCTTGGC
TACAGTACACAGCAGTGCTGCAGTACGGGTGCATGACCAAGGCGGTGCCC
TCCTAACGTCATGTGGCCGCGCCGCTCTGCCTTTGTCCGTGCCATTTCGG
TCCCCGGCAGGGACGGAATAGTTTTGTTAGGGACAACTGCCATCTGTTGC
CGGGGACGGTTCTTCCTGAAGGGGCCGTGGTCCCCCCCTTTACTGTGGTG
AGAGAAGTTGCAGCATTCCCCGGCTATCTTCATCTTGTGGAAGTGATCCC
GTGTCCCATACCGCAACCACGGTCCCACACATTCCGTGCTTTCCTCCGCG
CCTTACCTTCCATGGCACGCCCCCACACGCGTATGCATGCACGTTCTTGC
TGTTCAGGCTCAAACCGTTCCTCCTCGTTGCCTATCTCTCCCCCTCTTCC
TTTGTGCGTCGGTCGACCCCAATTGCCCCAGCTCCAGGGCTGCCCGGCGA
GGATGGTGTCAGTGCTACATGAGAGCACGCCGTCGGTGTGGACGGAGGAC
GCCGTGAACTTCTACGAAACTTTCGAGCCGAGCGCTGTTGTGACACCCAA
ATGACCCTTGCCTGTGGCCCGTATCTCCCCCAAACTTTTTTGAACGCACG
CCCACAATGCCAATTCCAGCTCTTTCTCGTGGCTATGTATGTGTGTGACG
TTGCAGTGCGAGCTCTGTCTACGACGCTGTTGTTTGATCTGCAGCCTCCA
TGCCGATGTCTGTTCGCGAAACATGCCGAACAATTGTTTATGTTCACCTT
TAGTATCACAATCTCTGCCTAGAAACTTGCCCGGTCTGTTCAGTGTCCAC
CGCAGTTCATGTGGCCATGGATTTTGTTTGACGGGAAGCGAGTTCACTCT
GTGTGTAGATCTTTCTTCTGGTGATTTCCTGCCCGATTCGGTCTCACGTT
CTTTTACTTTCCCGTAGAGAGTGATTTACTCGGCTGTCGGTGTTTTAGCT
GTAGCTGTACTGGTGATCAAGTCCAAAATGTCAAACACCTACTGAATCTG
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Coding sequence (CDS) from alignment at chr_28:474237..477586-

>Ec-28_000450.1 ID=Ec-28_000450.1|Name=Ec-28_000450.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=558bp|location=Sequence derived from alignment at chr_28:474237..477586- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGCAGGATCTGCGCAAGAAGAGTACGTGAAGACCCGCGATGGCGACAT
TGTCTTCAAGAAAGCTCACGTCCACGGCTTGCACAACCTATTTCTCATGG
GAAGGAGCATCATCATGCCAGGGGTAATCATCCGCGGAGAACTACAGGAG
ATCCGAATAGGTCGGTACTGCGTCGTTGGCGAAGGCACCGTCATCCGACC
AGCTTACAGGATTGAACAAGAGGAGTCTAACCTCAAGTGTCGCTTCACCC
CGCTATCTGTGGGTAGCCACACCTATATCGGCAAGTCCTGCGTCGTAGAA
TCGGCTGGCATTGGGTGCAACGTGCGGATCGAGGATGGATGCGTTTTGGG
ACGGAATAGTTTTGTTAGGGACAACTGCCATCTGTTGCCGGGGACGGTTC
TTCCTGAAGGGGCCGTGGTCCCCCCCTTTACTGTGCTCCAGGGCTGCCCG
GCGAGGATGGTGTCAGTGCTACATGAGAGCACGCCGTCGGTGTGGACGGA
GGACGCCGTGAACTTCTACGAAACTTTCGAGCCGAGCGCTGTTGTGACAC
CCAAATGA
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Synonyms
The feature 'Ec-28_000450.1' has the following synonyms
Synonym
Esi0120_0077
Esi_0120_0077