Ec-28_000420.6 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-28_000420.6
Unique NameEc-28_000420.6
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length528
Homology
BLAST of Ec-28_000420.6 vs. uniprot
Match: A0A6H5L2P2_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2P2_9PHAE)

HSP 1 Score: 813 bits (2100), Expect = 6.080e-279
Identity = 491/833 (58.94%), Postives = 533/833 (63.99%), Query Frame = 1
Query:    1 MGSMVVVHLSGRQLGSEHGSISLIK--VVGKISRPPVLFDVVELSKTKTRQNLLLNKLSPLFADQRSTKVVYDFSNSAIALRRQFGAGFTIGRILDLQLAFEALHGRFGADVVTVLRAFGQQVSYSDAAFRALSCEEASTMRRPIDTTTLGLAAQPVLSLAKVTESAVLSLSKKRQKDIVLEASQRTTEFAMSSWSQDTRRMAFRNHGSCWGGGVGRILTSFELKHVSAFPENIVYGFFRLKAREKVGLSAPSGQALSSNATPAVIGDNDPTVRSALDSLEQNDGVERDPNSPHEILELIPEDFLEEHLTERHVQNVQDLNELVLDEGRRPYATLQGRGKLFLCSDKSVVVTKEHIDMVVGRLDLEGKFAGDNRAGVPGQLHRISVMRGREGRRIFGVTLRIGRYFPGSAGLVDDLLFHVQGSPDKPERAASVLVLGKPGCGKTTVLRDICRKISQEQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPDKTDQHKYALLPLPHTRDSRVALLVAAGQSRCRRSFLLV*CPCFEGRDRQVPTASLSTHSHTSLTVSKY*PT*LQRHFSASLLLASCHTLGWMRRCA*MSGSLLTRLHRKGRRFGVQGSE*RCDHSVGGCSCATAFMRNIFPLLKRRKFGSHVVVRSYSPPLLLERTCVRTGLYSAVFRSRARSAFPLCALVSFYYPGVYKSA**KRRFRTTRPRRLWWMRYPTRTRLGHAWTSRLGRPCGGECPRRLAIAAREPGTQHSGRRHDKRNPR*CDGHRYQRGKQVQRQRAGAPIFDTIVELERGQVNKWTIVWNVDLAVDAILSGKPYKVSQRTRIPNDSGLQQA 2493
            MGS VVVHLSGRQLG+ +GSISLIK  VVG +S PPVLFDVVELSKT+  QN+L  KLSPLFADQRSTKVVYDFSNSAIALRRQFGAGFTIGRILDLQLA EALHG FGAD+VTVL AFGQ  SY+DAAFRALSCEEASTMRRPID TTLGLAAQPV+SLAKVTESA+LSLSK+ QKDIVLEASQR TEFAMSS  QDTRR+AFRNHGSC GGGVGRILTSF+LK                +ARE+ GLSAPS QALSSNATPA+  D +PT  SALDS +Q+DGV +DPNSPHEIL+ IPE+FLEE+LTE H+QN+QDLNELVLDEGRRPYATLQGRGKLFLCSDKSVVVTKEHIDMVVGRLDLE KFAGDNRAGVPGQLHRISVMR RE RRIFGVTLRIGRYF GSA LVDD+LFHVQGSPDKPERAASVLVLGKPG GKTTVLRDICRKISQEQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVP+K  QH      L +     + +   + ++  R         C + + R V                               ++AS H            G L + L                +  VGG +  T                                                                                             LG A  S                                             G ++QRQRAGAPIFDTIVELERGQVNKWTIV NVDLAVDAILSGKPYKV QRTRIP+DSGLQQA
Sbjct:  241 MGSTVVVHLSGRQLGAANGSISLIKLQVVGTMSHPPVLFDVVELSKTEDHQNMLRKKLSPLFADQRSTKVVYDFSNSAIALRRQFGAGFTIGRILDLQLASEALHGHFGADIVTVLTAFGQPASYNDAAFRALSCEEASTMRRPIDATTLGLAAQPVISLAKVTESAILSLSKEGQKDIVLEASQRMTEFAMSSGRQDTRRVAFRNHGSCCGGGVGRILTSFDLK----------------QARERGGLSAPSRQALSSNATPAIFDDTNPT--SALDSSKQSDGVAQDPNSPHEILKRIPEEFLEEYLTESHLQNLQDLNELVLDEGRRPYATLQGRGKLFLCSDKSVVVTKEHIDMVVGRLDLEDKFAGDNRAGVPGQLHRISVMRSREARRIFGVTLRIGRYFSGSASLVDDVLFHVQGSPDKPERAASVLVLGKPGSGKTTVLRDICRKISQEQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPNKAGQHNVMKEALQNHTPQTIVVDEVSDKNEARA--------CLDIKARGVR------------------------------VVASAH------------GDLQSLLENP-----------ELNTLVGGTTSVT---------------------------------------------------------------------------------------------LGDAMASATNA-----------------------------------------GNKIQRQRAGAPIFDTIVELERGQVNKWTIVRNVDLAVDAILSGKPYKVEQRTRIPHDSGLQQA 860          
BLAST of Ec-28_000420.6 vs. uniprot
Match: D7FII6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FII6_ECTSI)

HSP 1 Score: 370 bits (949), Expect = 5.000e-112
Identity = 213/270 (78.89%), Postives = 213/270 (78.89%), Query Frame = 1
Query:    1 MGSMVVVHLSGRQLGSEHGSISLIKVVGKISRPPVLFDVVELSKTKTRQNLLLNKLSPLFADQRSTKVVYDFSNSAIALRRQFGAGFTIGRILDLQLAFEALHGRFGADVVTVLRAFGQQVSYSDAAFRALSCEEASTMRRPIDTTTLGLAAQPVLSLAKVTESAVLSLSKKRQKDIVLEASQRTTEFAMSSWSQDTRRMAFRNHGSCWGGGVGRILTSFELKHVSAFPENIVYGFFRLKAREKVGLSAPSGQALSSNATPAVIGDNDPT 810
            MGSMVVVHLSGRQLGSEHGSISLIKVVGKISRPPVLFDVVELSKTKTRQNLLLNKLSPLFADQRSTKVVYDFSNSAIALRRQFGAGFTIGRILDLQLAFEALHGRFGADVVTVLRAFGQQVSYSDAAFRALSCEEASTMRRPIDTTTLGLAAQPVLSLAKVTESAVLSLSKKRQKDIVLEASQ                                                         AREKVGLSAPSGQALSSNATPAVIGDNDPT
Sbjct:  351 MGSMVVVHLSGRQLGSEHGSISLIKVVGKISRPPVLFDVVELSKTKTRQNLLLNKLSPLFADQRSTKVVYDFSNSAIALRRQFGAGFTIGRILDLQLAFEALHGRFGADVVTVLRAFGQQVSYSDAAFRALSCEEASTMRRPIDTTTLGLAAQPVLSLAKVTESAVLSLSKKRQKDIVLEASQ---------------------------------------------------------AREKVGLSAPSGQALSSNATPAVIGDNDPT 563          
BLAST of Ec-28_000420.6 vs. uniprot
Match: D7FII7_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FII7_ECTSI)

HSP 1 Score: 330 bits (847), Expect = 4.330e-101
Identity = 222/476 (46.64%), Postives = 237/476 (49.79%), Query Frame = 1
Query: 1066 MVVGRLDLEGKFAGDNRAGVPGQLHRISVMRGREGRRIFGVTLRIGRYFPGSAGLVDDLLFHVQGSPDKPERAASVLVLGKPGCGKTTVLRDICRKISQEQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPDKTDQHKYALLPLPHTRDSRVALLVAAGQSRCRRSFLLV*CPCFEGRDRQVPTASLSTHSHTSLTVSKY*PT*LQRHFSASLLLASCHTLGWMRRCA*MSGSLLTRLHRKGRRFGVQGSE*RCDHSVGGCSCATAFMRNIFPLLKRRKFGSHVVVRSYSPPLLLERTCVRTGLYSAVFRSRARSAFPLCALVSFYYPGVYKSA**KRRFRTTRPRRLWWMRYPTRTRLGHAWTSRLGRPCGGECPRRLAIAAREPGTQHSGRRHDKRNPR*CDGHRYQRGKQVQRQRAGAPIFDTIVELERGQVNKWTIVWNVDLAVDAILSGKPYKVSQRTRIPNDSGLQQA 2493
            MVVGRLDLEGKFAGDNRAGVPGQLHRISVMRGREGRRIFGVTLRIGRYFPGSAGLVDDLLFHVQGSPDKPERAASVLVLGKPGCGKTTVLRDICRKISQEQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPDKTDQH      L +     + +   + ++  R         C + + R V                               ++AS H            G L + L                +  VGG +  T                                                                                             LG A                +AIA                            G +VQRQRAGAPIFDTIVELERGQVNKWTIVWNVDLAVDAILSGKPYKVSQRTRIPNDSGLQQA
Sbjct:    1 MVVGRLDLEGKFAGDNRAGVPGQLHRISVMRGREGRRIFGVTLRIGRYFPGSAGLVDDLLFHVQGSPDKPERAASVLVLGKPGCGKTTVLRDICRKISQEQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPDKTDQHNVMKEALQNHTPQTIVVDEVSNKNEARA--------CLDIKARGVR------------------------------VVASAH------------GDLQSLLENP-----------ELNTLVGGTTSVT---------------------------------------------------------------------------------------------LGDA----------------MAIATNA-------------------------GNKVQRQRAGAPIFDTIVELERGQVNKWTIVWNVDLAVDAILSGKPYKVSQRTRIPNDSGLQQA 281          
BLAST of Ec-28_000420.6 vs. uniprot
Match: D7G6R4_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6R4_ECTSI)

HSP 1 Score: 169 bits (427), Expect = 2.770e-42
Identity = 88/171 (51.46%), Postives = 122/171 (71.35%), Query Frame = 1
Query:  997 LQGRGKLFLCSDKSVVVTKEHIDMVVGRLDLEGKFAGDNRAGVPGQLHRISVMRGREGRRIFGVTLRIGRYFPGSAGLVDDLLFHVQGSPDKPERA----ASVLVLGKPGCGKTTVLRDICRKISQEQTVVIVDTSNEIAGDGHIPHLAAIGQ-SRRMMVPDKTDQHKYAL 1494
            ++GRGK++LC D+ V+VT+ H++ VVG+L+  G F  DN AG  G LHR+ VMR + G+ I+GVT+R+GRY  G A +VDDLLF+   +    +RA    AS+LVLG+ G GKTT++RD+CRK+S  +TVVIVDT ++I G G +PH  AIG+ SRR+MVP    QH+  L
Sbjct:   13 VKGRGKVYLCKDRGVLVTRYHLNCVVGKLEHLGLFGRDNMAGFDGLLHRVGVMRDKGGK-IYGVTIRVGRYAKGMADMVDDLLFNHHTATGSGKRASQAPASILVLGRHGAGKTTLVRDMCRKLSSHETVVIVDTRSDIGGAGVVPHRRAIGEESRRVMVPQGMQQHEVIL 182          
BLAST of Ec-28_000420.6 vs. uniprot
Match: A0A6H5JW61_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW61_9PHAE)

HSP 1 Score: 176 bits (446), Expect = 7.130e-41
Identity = 92/184 (50.00%), Postives = 131/184 (71.20%), Query Frame = 1
Query:  952 LNELVLDEGRRP-YATLQGRGKLFLCSDKSVVVTKEHIDMVVGRLDLEGKFAGDNRAGVPGQLHRISVMRGREGRRIFGVTLRIGRYFPGSAGLVDDLLFHVQGSPDKPERA-ASVLVLGKPGCGKTTVLRDICRKISQEQTVVIVDTSNEIAGDGHIPHLAAIGQ-SRRMMVPDKTDQHKYAL 1494
            +N+++    + P Y T +GRGK++LC D+ V+VT+ H++ VVG+L+  G F  DN AG  G LHR+ VMR + G+ I+GVT+R+GRY  G A +VDDLLF+   +  +  +A AS+LVLG+ G GKTT++RD+CRK+S  +TVVIVDT ++I G G +PH  AIG+ SRR+MVP  T QH+  L
Sbjct: 1604 VNDIMAHRRKPPKYCTCRGRGKVYLCKDRGVLVTRYHLNCVVGKLEHLGLFGRDNMAGFDGLLHRVGVMRDKGGK-IYGVTIRVGRYAKGMADMVDDLLFNHHVAKKRASQAPASILVLGRHGAGKTTLVRDMCRKLSSHETVVIVDTRSDIGGAGVVPHRGAIGEESRRVMVPQGTQQHEVIL 1786          
BLAST of Ec-28_000420.6 vs. uniprot
Match: A0A6J4KKB6_9CYAN (SpoIIIAA (Fragment) n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A6J4KKB6_9CYAN)

HSP 1 Score: 142 bits (357), Expect = 9.530e-35
Identity = 90/204 (44.12%), Postives = 125/204 (61.27%), Query Frame = 1
Query:  880 ILELIPEDFLEEHLTERHVQNVQDLNELVLDEGRRPYATLQGRGKLFLCSDKSVVVTKEHIDMVVGRLDLEGKFAGDNRAGVPGQLHRISVMRGREGRRIFGVTLRIGRYFPGSAGLVDDLLFHVQGSPDKPERAASVLVLGKPGCGKTTVLRDICRKISQE--QTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPDKTDQHK 1485
            +L ++P D + +HL E H Q   +L E+V+D GRRP A   GR +          +T+EH+D    R+   G F+GDNRAG+   LHRIS +R R+G  + G+T R+GR   G+ G++ DL+          E   S+L+LG+PG GKTT LR+I R ++ E  + VVI+DTSNEIAGDG IPH  AIG++RRM V     QH+
Sbjct:   19 LLGVLP-DIIRQHL-ELHSQT-SNLIEVVMDLGRRPEARFPGRAEYL----SETPITREHLDYCTARV---GSFSGDNRAGIEQTLHRISAIRNRQGE-VIGLTCRVGRAVFGTIGMIRDLV----------ETGRSILMLGRPGVGKTTALREIARVLADELEKRVVIIDTSNEIAGDGDIPH-PAIGRARRMQVARPELQHQ 200          
BLAST of Ec-28_000420.6 vs. uniprot
Match: A0A1W0A2D8_9STRA (AAA domain-containing protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2D8_9STRA)

HSP 1 Score: 147 bits (371), Expect = 3.400e-34
Identity = 86/201 (42.79%), Postives = 121/201 (60.20%), Query Frame = 1
Query:  877 EILELIPEDFLEEHLTERHVQNVQDLNELVLDEGRRPYATLQGRGKLFLCSDKSVVVTKEHIDMVVGRLDLEGKFAGDNRAGVPGQLHRISVMRGREGRRIFGVTLRIGRYFPGSAGLVDDLLFHVQGSPDKPERAASVLVLGKPGCGKTTVLRDICRKISQEQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPDKTDQ 1479
            EIL L+PED +   L          L ++VLD GRRP+A     G   L  D   + ++E +D ++ ++   G F  DNRAG+  QLHRIS +R R G  I G+T+R+GRY  G+A L+ D+L          ++  ++L LG+PGCGKTT++R++ R+++    V IVDTSNEIAGDG IPH   +G SRR+MVP    Q
Sbjct:  204 EILALLPEDLV---LQLSDTSTASGLLDIVLDRGRRPWAW--AHGARILLGDDDRITSQEDLDGIIEKV---GGFGTDNRAGLERQLHRISAIRNRTGG-IMGLTIRVGRYIEGNASLIADIL---------ADQDKNILFLGEPGCGKTTIVREVARQLANSHNVCIVDTSNEIAGDGDIPH-PCVGLSRRLMVPSLDQQ 385          
BLAST of Ec-28_000420.6 vs. uniprot
Match: A0A7S0RIK1_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RIK1_9CHLO)

HSP 1 Score: 142 bits (359), Expect = 9.710e-34
Identity = 91/206 (44.17%), Postives = 124/206 (60.19%), Query Frame = 1
Query:  877 EILELIPEDFLE----EHLTERHVQNVQDLNELVLDEGRRPYATLQGRGKLFLCSDKSVVVTKEHIDMVVGRLDLEGKFAGDNRAGVPGQLHRISVMRGREGRRIFGVTLRIGRYFPGSAGLVDDLLFHVQGSPDKPERAASVLVLGKPGCGKTTVLRDICRKISQEQ-TVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPDKTDQ 1479
            E+LEL+PE F E     +L   H   V  L ++VLD G RP A    +  ++L     VVV +  +D  + +LD  GKF  DNRAG+ G LHRIS MR + G+ I+G+TLR+GR   G+  ++ D+L              SVLVLG PGCGKTT++R+  R +S+ +  VV+VDTSNEI GDG +PH  ++G +RRMMVP    Q
Sbjct:   60 ELLELVPERFREFLGPGNLLRGHPP-VCTLQDVVLDLGARPRAFFGKQQLVYLAERHDVVVEQADLDPALAKLD--GKFGADNRAGMDGSLHRISAMRAKSGQ-IYGLTLRVGRAVYGNTKMLTDILL---------AGTESVLVLGSPGCGKTTIVREAARVLSEARLNVVVVDTSNEICGDGLVPH-RSVGLARRMMVPSLPHQ 251          
BLAST of Ec-28_000420.6 vs. uniprot
Match: A0A1W0A235_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A235_9STRA)

HSP 1 Score: 150 bits (380), Expect = 3.320e-33
Identity = 96/201 (47.76%), Postives = 130/201 (64.68%), Query Frame = 1
Query:  877 EILELIPEDFLEEHLTERHVQNVQDLNELVLDEGRRPYATLQGRGKLFLCSDKSVVVTKEHIDMVVGRLDLEGKFAGDNRAGVPGQLHRISVMRGREGRRIFGVTLRIGRYFPGSAGLVDDLLFHVQGSPDKPERAASVLVLGKPGCGKTTVLRDICRKISQEQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPDKTDQ 1479
            EIL L+PED L   LTE  V +   L ++VLD GRRP+A + G  +LFL  D   +VT+E +D +V ++   G F  DNRAG+  QLHRIS +R R    I G+T+R+GRY  G+A ++ D+L +     DK     ++L LG+PGCGKTT++R++ R+++    V IVDTSNEIAGDG IPH   +G SRRMMVP    Q
Sbjct:   82 EILSLLPED-LATPLTEPTVAS--GLLDIVLDRGRRPWAWVNG-SRLFLV-DNDRLVTQEDLDGIVEKV---GGFGSDNRAGLERQLHRISAIRNRTSD-IMGLTIRVGRYIEGNASMIADILEN----QDK-----NILFLGEPGCGKTTIVREVARQLASGHNVCIVDTSNEIAGDGDIPH-PCVGLSRRMMVPSLDQQ 263          
BLAST of Ec-28_000420.6 vs. uniprot
Match: A0A1Y5IJP6_OSTTA (AAA domain-containing protein n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5IJP6_OSTTA)

HSP 1 Score: 144 bits (362), Expect = 5.230e-33
Identity = 91/205 (44.39%), Postives = 125/205 (60.98%), Query Frame = 1
Query:  880 ILELIPEDFLEEHLTERHVQNVQDLNELVLDEGRRPYATLQGR-GKLFLCSDKSVVVTKEHIDMVVGRLDLEGKFAGDNRAGVPGQLHRISVMRGREGRRIFGVTLRIGRYFPGSAGLVDDLLFHVQGSPDKPERAASVLVLGKPGCGKTTVLRDICRKISQ--EQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPDKTDQHK 1485
            IL+++PED  +  + E+H ++   L E+VLD GR P A   G  G +FL   +   VT+E +   +   D  G F GDNRAG+ G LHR+S +R R GR I G+T R+GR   G   ++DD+L              SVL LG+PG GKTTV+R++ R +S   ++ VVI+DTSNEI GDG +PH  AIG +RRM VPD + QH+
Sbjct:   21 ILDVLPEDVRD--VVEKHPESG-SLLEIVLDLGRAPEARFLGELGSVFL---REAPVTEEEL---IAASDAVGDFGGDNRAGIEGTLHRVSCIRNRRGR-IVGMTCRVGRAVTGHIDMIDDIL----------PSGESVLFLGRPGVGKTTVIREMARVLSDRLKKRVVIIDTSNEIGGDGDVPH-RAIGGARRMQVPDPSQQHR 204          
The following BLAST results are available for this feature:
BLAST of Ec-28_000420.6 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2P2_9PHAE6.080e-27958.94AAA domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FII6_ECTSI5.000e-11278.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FII7_ECTSI4.330e-10146.64AAA domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G6R4_ECTSI2.770e-4251.46AAA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JW61_9PHAE7.130e-4150.00AAA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6J4KKB6_9CYAN9.530e-3544.12SpoIIIAA (Fragment) n=2 Tax=Cyanobacteria TaxID=11... [more]
A0A1W0A2D8_9STRA3.400e-3442.79AAA domain-containing protein (Fragment) n=1 Tax=T... [more]
A0A7S0RIK1_9CHLO9.710e-3444.17Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
A0A1W0A235_9STRA3.320e-3347.76Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A1Y5IJP6_OSTTA5.230e-3344.39AAA domain-containing protein n=2 Tax=Ostreococcus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:439635..453364 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score281.2
Seed ortholog evalue1e-72
Seed eggNOG ortholog2880.D7FII7
Length3328
Hectar predicted targeting categoryother localisation
Gene idEc-28_000420.6
EggNOG free text desc.ATPases associated with a variety of cellular activities
EggNOG OGs2QQ4X@2759,COG3854@1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_000420Ec-28_000420Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_28 436391..453364 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000420.6.1Ec-28_000420.6.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 439635..439709 +
Ec-28_000420.6.2Ec-28_000420.6.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 440131..440256 +
Ec-28_000420.6.3Ec-28_000420.6.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 445655..445839 +
Ec-28_000420.6.4Ec-28_000420.6.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 446335..446428 +
Ec-28_000420.6.5Ec-28_000420.6.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 446608..446676 +
Ec-28_000420.6.6Ec-28_000420.6.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 446927..447097 +
Ec-28_000420.6.7Ec-28_000420.6.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 447236..447324 +
Ec-28_000420.6.8Ec-28_000420.6.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 447640..447759 +
Ec-28_000420.6.9Ec-28_000420.6.9Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 448230..448303 +
Ec-28_000420.6.10Ec-28_000420.6.10Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 448632..448795 +
Ec-28_000420.6.11Ec-28_000420.6.11Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 449168..449267 +
Ec-28_000420.6.12Ec-28_000420.6.12Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 449663..449763 +
Ec-28_000420.6.13Ec-28_000420.6.13Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 450062..450867 +
Ec-28_000420.6.14Ec-28_000420.6.14Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 451169..451307 +
Ec-28_000420.6.15Ec-28_000420.6.15Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 451807..451989 +
Ec-28_000420.6.16Ec-28_000420.6.16Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 452533..453364 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000420.6CDS:Ec-28_000420.6Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_28 439635..439709 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0004203UTR:Ec-28_000420.6Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_28 450278..450867 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000420.6Ec-28_000420.6Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_28 439635..450277 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-28_000420.6 ID=Ec-28_000420.6|Name=Ec-28_000420.6|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=528bp
MGSMVVVHLSGRQLGSEHGSISLIKVVGKISRPPVLFDVVELSKTKTRQN
LLLNKLSPLFADQRSTKVVYDFSNSAIALRRQFGAGFTIGRILDLQLAFE
ALHGRFGADVVTVLRAFGQQVSYSDAAFRALSCEEASTMRRPIDTTTLGL
AAQPVLSLAKVTESAVLSLSKKRQKDIVLEASQRTTEFAMSSWSQDTRRM
AFRNHGSCWGGGVGRILTSFELKHVSAFPENIVYGFFRLKAREKVGLSAP
SGQALSSNATPAVIGDNDPTVRSALDSLEQNDGVERDPNSPHEILELIPE
DFLEEHLTERHVQNVQDLNELVLDEGRRPYATLQGRGKLFLCSDKSVVVT
KEHIDMVVGRLDLEGKFAGDNRAGVPGQLHRISVMRGREGRRIFGVTLRI
GRYFPGSAGLVDDLLFHVQGSPDKPERAASVLVLGKPGCGKTTVLRDICR
KISQEQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPDKTDQHKYALLP
LPHTRDSRVALLVAAGQSRCRRSFLLV*
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spliced messenger RNA

>Ec-28_000420.6 ID=Ec-28_000420.6|Name=Ec-28_000420.6|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3328bp|location=Sequence derived from alignment at chr_28:439635..453364+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGGAGCATGGTAGTAGTGCACCTCAGCGGGCGCCAGCTTGGGTCTGA
ACACGGATCTATTTCGCTCATCAAGGTCGTGGGAAAAATATCGCGTCCGC
CGGTCCTCTTTGACGTTGTGGAGCTCAGCAAGACTAAGACTCGCCAGAAC
TTGTTGCTCAATAAGCTGTCCCCGCTGTTCGCAGACCAGCGGTCGACAAA
GGTGGTGTACGACTTCAGCAACAGCGCGATTGCCTTGCGGCGTCAGTTTG
GCGCGGGGTTCACGATTGGTAGAATCCTGGACCTCCAGCTGGCCTTTGAA
GCTCTCCACGGGCGCTTCGGTGCGGATGTCGTGACAGTCTTGAGAGCTTT
CGGGCAGCAGGTTTCCTACAGCGACGCCGCCTTCAGGGCACTCAGCTGTG
AAGAAGCGTCAACCATGAGGCGACCTATTGACACGACAACATTGGGCTTG
GCGGCACAGCCAGTCTTATCGCTTGCCAAGGTCACGGAAAGCGCCGTCTT
GAGTCTGTCCAAGAAAAGGCAAAAGGACATCGTGCTGGAAGCTTCTCAGC
GGACGACAGAGTTCGCCATGTCCTCCTGGAGCCAAGACACGCGGAGGATG
GCGTTTCGCAACCACGGTTCTTGCTGGGGAGGCGGGGTCGGGAGAATTCT
GACCAGCTTCGAGCTCAAGCACGTATCTGCTTTCCCGGAAAACATCGTGT
ATGGTTTCTTCAGGCTTAAGGCCAGAGAGAAGGTCGGGCTATCGGCTCCT
TCGGGACAGGCGCTGTCCTCGAACGCGACACCGGCTGTCATCGGCGACAA
CGACCCCACTGTTAGGTCGGCCCTTGACAGCTTGGAGCAGAATGATGGCG
TGGAGCGAGATCCCAACTCTCCCCACGAGATTCTGGAACTTATTCCTGAA
GACTTTCTCGAAGAACACCTGACAGAAAGGCACGTGCAGAACGTACAGGA
TCTGAACGAGCTCGTTCTCGACGAAGGAAGGAGGCCCTACGCCACTCTGC
AAGGGCGCGGAAAGCTGTTCCTCTGCAGCGACAAGAGTGTGGTCGTGACC
AAAGAACACATCGACATGGTCGTTGGGCGGCTCGACCTCGAGGGCAAGTT
CGCGGGCGACAACCGAGCGGGCGTCCCGGGACAGCTGCACCGCATCAGCG
TCATGAGGGGCAGGGAGGGCAGGCGGATCTTCGGCGTGACTCTGCGGATT
GGCCGTTACTTCCCGGGTAGTGCAGGCTTGGTCGACGACCTGCTCTTCCA
CGTGCAGGGCAGCCCCGACAAGCCCGAGCGTGCCGCTTCTGTCCTTGTGC
TGGGCAAGCCAGGGTGTGGCAAGACCACCGTCCTTCGCGACATCTGCCGA
AAGATCTCCCAGGAGCAGACCGTGGTGATTGTGGACACGAGCAACGAGAT
TGCCGGCGACGGCCACATCCCTCACCTCGCGGCCATCGGACAGAGCCGGA
GGATGATGGTTCCGGACAAGACAGACCAGCACAAGTACGCCTTGCTTCCT
CTTCCTCACACGCGGGACTCGCGCGTCGCGCTGCTGGTCGCCGCGGGTCA
ATCACGATGTCGTCGGTCCTTCTTGTTGGTGTAGCTGCCCTTGTTTCGAG
GGGCGAGACAGACAGGTTCCAACAGCCAGCCTATCTACACACAGTCACAC
ATCACTTACTGTTTCTAAGTATTGACCGACGTGACTCCAGAGACATTTCT
CCGCATCCCTGTTATTGGCGTCCTGCCATACGTTGGGTTGGATGCGCCGA
TGTGCGTAAATGTCCGGGTCTTTACTGACTCGCTTGCATCGAAAGGGACG
ACGATTCGGGGTGCAAGGTAGTGAGTGAAGGTGCGATCATTCTGTGGGTG
GGTGTAGCTGTGCCACCGCGTTCATGAGGAATATCTTTCCGTTGTTGAAA
AGGAGGAAATTCGGGTCTCATGTTGTTGTTCGCTCGTACTCACCGCCACT
TCTTCTTGAACGTACGTGTGTGCGAACAGGGTTGTACAGCGCGGTATTCC
GCTCACGTGCTCGTTCTGCCTTTCCCTTGTGTGCGTTGGTTTCTTTCTAT
TACCCTGGTGTGTACAAATCAGCGTGATGAAAGAGGCGCTTCAGAACCAC
ACGCCCCAGACGATTGTGGTGGATGAGGTATCCAACAAGAACGAGGCTAG
GGCATGCTTGGACATCAAGGCTCGAGGCGTCCGTGTGGTGGCGAGTGCCC
ACGGAGACTTGCAATCGCTGCTCGAGAACCCGGAACTCAACACTCTGGTC
GGAGGCACGACAAGCGTAACCCTAGGTGATGCGATGGCCATCGCTACCAA
CGCGGGAAACAAGGTCCAGAGGCAGCGAGCCGGTGCACCGATCTTTGACA
CGATCGTAGAGCTAGAGCGGGGGCAAGTGAACAAGTGGACCATCGTGTGG
AATGTCGACCTCGCTGTGGACGCTATCCTGAGCGGGAAGCCGTACAAGGT
GTCGCAGAGAACCCGCATCCCGAATGACTCGGGCCTCCAACAAGCGGGTG
CTGACCACGAAGATGCGGCTTTCCTTCTCAAGCACGCCTACGCGATGGAA
CAGACCAAGCAGTACTACTGATTGGAAGTCGTTCGCGGGGCGGTGAAAAG
GGTATAATGGTCCTTGAACTTGAGTCTTTGATGCCAAGGTACTGTAGACC
ATGGATACGTACACCAGCCTTGGCAGAGATGAGACAGGTTTTTGGAGTAC
GCTGGCGTGTGTCCGATTTTGTGTGTCTGAATTGCGAGCCCCCGTTGATT
TGCAAACTGCCAGAGGCAGAGCTTAGTGTGAGCTGATGATGCATGGCTGT
CCAGTATAGAACGGAGGGATTCGGTCGGGACTTTCGATCGATGAAGCGTA
GCTTGAAGGTGTGTATTCGTTGTAGAGATAACGTTTAAGGTCTCACACGA
ATGATGCCATCGGAGTGGGTACCACAATGTTACAAATATTGATCCTGAAA
TGTGTTGAGACTGAATGTGTTGAACTGACGAAATAAAAAGAATTTGATAA
CGCGATCTCTCACAGGGATGGGGGGGGAGGTGAATCGAAAGCAGTTTGTC
CGACGACGACGAGAGTAGTGCGAATGTTTGTTTTATTCCCCGTTCGACAA
CGAGAGGCGTTCTCAGACGTGTGCCTTCGACCTACTCTAGTTTTATTGAC
AGTTGCCATCTTGCAGGGCTCGCTGTTTTATGTACGTCCCACGAAAATCA
CCTAGAGGTGTAGACCAAACCCAGGGGTCCAGCGTGGAGGAGATTATCAA
ACACAGAACAACGATAAGGATCATTCGAGTTTCGAGAGCTGAACATTCGA
ACAAGTGGGACTCCGAGAATTCCCGCAG
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protein sequence of Ec-28_000420.6

>Ec-28_000420.6 ID=Ec-28_000420.6|Name=Ec-28_000420.6|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=528bp
MGSMVVVHLSGRQLGSEHGSISLIKVVGKISRPPVLFDVVELSKTKTRQN
LLLNKLSPLFADQRSTKVVYDFSNSAIALRRQFGAGFTIGRILDLQLAFE
ALHGRFGADVVTVLRAFGQQVSYSDAAFRALSCEEASTMRRPIDTTTLGL
AAQPVLSLAKVTESAVLSLSKKRQKDIVLEASQRTTEFAMSSWSQDTRRM
AFRNHGSCWGGGVGRILTSFELKHVSAFPENIVYGFFRLKAREKVGLSAP
SGQALSSNATPAVIGDNDPTVRSALDSLEQNDGVERDPNSPHEILELIPE
DFLEEHLTERHVQNVQDLNELVLDEGRRPYATLQGRGKLFLCSDKSVVVT
KEHIDMVVGRLDLEGKFAGDNRAGVPGQLHRISVMRGREGRRIFGVTLRI
GRYFPGSAGLVDDLLFHVQGSPDKPERAASVLVLGKPGCGKTTVLRDICR
KISQEQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPDKTDQHKYALLP
LPHTRDSRVALLVAAGQSRCRRSFLLV*
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mRNA from alignment at chr_28:439635..453364+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-28_000420.6 ID=Ec-28_000420.6|Name=Ec-28_000420.6|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=13730bp|location=Sequence derived from alignment at chr_28:439635..453364+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGGGAGCATGGTAGTAGTGCACCTCAGCGGGCGCCAGCTTGGGTCTGA ACACGGATCTATTTCGCTCATCAAGGTATGCTCTCAAGATATGCATGCTC TTTGGAGTTGTTTGTTGAGGAGGTCGTGAACCGGGTTTGCAGCATGAAGG ACAGTAGTGTTCTCCCCTGTCACATGGTCCCATGGCTCCACACGCTTGAA TCCTGCAGGTTCCGTACATCTGTTTGCCACGTCAACACGGAAGGCGTGGC AGGCTGAAGTGGTGAAAAGGTGTCAAGACTAGCTTTGAAGGCATCCCCCG GTTGTTACGACCACGTCATTTTTCGTGTTTTTCTCTCCGGCCCTTTGTTT TTCGAGAACGATTTGAAAGCACCTGCCAACTAGCTGTTCGCCTTCCCAAC ACCCACGGATATCTTGAGACAGAAGACTGCAAACAGCCGTATGCTTACCT ACCCTGCTACGCCTGTGCCCAAACGTCCTGTTTTCTGAAACTCCAGGTCG TGGGAAAAATATCGCGTCCGCCGGTCCTCTTTGACGTTGTGGAGCTCAGC AAGACTAAGACTCGCCAGAACTTGTTGCTCAATAAGCTGTCCCCGCTGTT CGCAGACCAGCGGTCGACAAAGGTGAGTGTATGTTGCTGGCAGTCTACGT CAGTAAGGCTTGCGTCGAAGGAAGACACCACCAATGAGAGAACCATCGAT TGCCACTTGTGCGCATGGTGCCGTCCCTCGGGGAGGGGGGCGTATTCATG TTTTGCTTGCCACGCTTCCTCGAGAGGACGGGGCATTGTCCCCACAGGAC CGACCACCGATGGCCAATCGTTTTGCCAAAGGTGGCTCAAAAATGTCAGC TTCCCTAGTCTGTCGTTCCTAACGATATCCCTTCCCGCCTTTTCAAACCA CTTCCTACTCCCCAGTACAGCTACCGTCCTCTCCTCTCCATTCCATGCCT CAAACATCTCCCTGTACCTCCCCTTGTATTTCTCCCAGCTTAGTCATGTA CACTTCCCTCTCCTTATTGTACAGCCGACATTCCGCGACTACATGAACAC GGTCTTCGCATTCAAAGCCGCAATCACATTTGAACTTGTCGTCTTCGTCG TCTCCCGTCCTATATATTCGTCGACGTTCTCGAAGGCCTATGTCCCCGGT CCTGAATTTGACCCTAAGCTTTGTCCCTGCATCCATTGGTCCATGTAGGT AATCCTTGAACCCTATTCCTTCTTTCAACATTCCGTACACTTCTAGACCC TCCTTATCCTGGGTTTTTTTCCTTAGATTCTGTTCTTATCTCTCGGCAGA AGCAACAGATATCTTCTCCTTGAACCCCTGTAGACCCTCCGTTTCCAGTG TTTCATCTTCATCGATGTCGAACCCCTTCCATACGTCCTCTACAACCTTG ACCCATTCCGTGGGTTGTCTACCCCCTCTTTTTGTTTGCCCACTTCGCCT CCCATACTATTCTCGGCAACCTCTCCTCTCCCATCCCGCACATGCGATAC TGCCATGTCAGCTTCCTTACGTCTCTTCCCGACCGTAGGGATGGGATCCC CAATTCTGCCCTGACGGCTGCATTACTTGTGCGCTTGGAGCATCCTAGGA TGATTTTCGCTGCTTTCATCTGCGCCGCCTCGAGTTATTTCACTACCTTC TTATTTCCTTCCCATAGTTCTCCGGCGTACTCTAGCGGCGGTACGATTAC ACTCTTCAACACCGTCAATGTGATGCGTGTATCGAGGTGCCGGTTTGCGA GTATTGGGTGCAGCTTCCCTGCTCGTGCTTTGCCCTTTCCGCTACCTTGG ACATGTGTGCATTCCACGAGCAGACTTTTGCGATCTCTACTCCGAGGTAT GTGTACTGGTCCACTACTGCAATCTCCTCGATCCCCCACTTCCATCTATG TTCTACTGGTTCCTCCCTGTCCTCGTTGCATACCATGACGGCACTCTTCT TAACGTTGGCAGACAACCTCCAACAAGTATCAGTAAACTTCTTCGCCGCG TCAATTTGCAGTTGCAGTCCCTCAGGAGTGTCCGACATACCAACAAAATC ATCCGCAAACAGCATTCCTGACACCGAAGTTTCCGTGTCCCCTACTTGTA CTCCCTTCCGGACTGCCTCTACGACTTCCAACAGATCTTTGATGAACACC TGGAACAATGTTGGGGACAGCGTGCAATCTTGTGGGACCCCCTGCTCAGT GTCGAAGAATTTAGACAGTTCTCCGTCTAGCATGACCGCGCTTTTCGTAC ACTAGGTCATCTTCTTCAGCACTCTCTACATTTTCCCTTTGATCCCGTAC TTGGACAATTGTTTCCACAGCCCATTTCTCCATACGGTATCGTATGCCTT TTTCACGTCCAGGAAGAAGCAGAACGTCGGCTTTCCCGCCCTCTTTCTAC CTTGGATGATGTTCCCTACTGTGAATGCGTGGTCTACACCCCCCCTCTTC TGTCGGAAACCTGCCTGGCCCTCACTAATGCTACGTTCCTTCTCCAATAC TCCCACTAACCTATCGTTCAGCGGCTTACAGAACACGTTTCCTACTGTGT TCAACAGTGTGAGACCCCTGTAGTTTCCTGGGCCAGTCTTTTCTCCTTTC TTAAACAAGTTCACAACCACTCCTTCCCTCCATCTACTTGGCGCATACTC GTTTTTTCACACCCAGTTGTACAGCAGTACCATTAGCTGGATCATCCCCT TCCCCCCAAACTTCATGAACTCGTTGACTATCCCATCCGCCCCTGCTGCT TTGTGGCACTGCAGCTTGGTCACACAGGCGTCAACCTCGTCCTCAGTGAA CTCCTTTTCTAGTTCTACGTTCCCAACGTCTGCCTTCGATGCCTCTTCTT CTTTCTGGGCCCATGCGTCCACCTCCTTCTTAAACACTTGGTCAAAAGCT TCATTCTCCGAAGGTACTCCAAGTGTCTTGTAGTGTCCTGCTAGAACTTC CCTTTTTCCCTTCCCCACTGCTGACTAGTCCACCGTTCACACCTCGCAAA GTTGCTACCCCTGTATCCCCCCCTTGCGCGGTCTTTTTTACCATCCCACT AATCCCTTCCCACATCTGCTTGACGTTCCCCTCCAGGCCTCCGTTGGCCT TCTGCACTACTTCGTCCCAATGCACTTTTTCTTCTTTTTCACTAGTCCCT TCACCTGTTTCCTCTTGGCCCTGTACTTTTCCCAACTCTCCTCAGACCCC TCACTCAGGTACTGCTTGAAGACTTTTCTACGTTCCCTATTTTCTTCTTT CAGCTCGTCATCCCACCACTTAACCGATACCCCACATCGTACCACCTTCT TTCCCACTTCTCTCTCCGCCGTTGTGTTCACTATGGACTCCCACCATTCA ATCACCCTGCCCCCTGCTGCTTGTACGTCTACCTGTCCGTCTTCGACGCT TCTCAGCAGTTTCCTGAAGGGTTCTACACTATCAGCCAGTCCCTTCTAGA ATCCATCCCGTGTCCCCTCGTCTCCCAAACGCTCTACTTTCCACCGAAAC ACTTTCCTCTGTTTCTTACTCTCCACCATTCTAGATCGGTCGATGGTTGC CCATATGAGGAAGTGGTCGGTCGAACCTATATCTATCGCACTTACGTGGA GCTCTGGGATCTGTGTGCTCAACCTATCTACCAGGATGTAGTCGAGGATC GAGTATTCATTGCAAACTGCCCTTTGCCTGGTGAACTCCGACTTATCGCA TTCCCTCCTACCGTTCAACACCATCAGCTCGTTGCTTCCCAAGAATTCAA GCATCCTCACTCCATTGCCATTCACTTTGTCTTCTCCGTGCTGCCCGATC GCCTGTCCTCTACTGGAAGCTTTCCCTATTCTGGAGTTGAAATCGCCCAC CATGACAACTTCTCCCTTCCTACTGAACCTCTGGACATGTTCCCCAATTT GTCCAACGTTCTCCTGCACCTTGCTTGCGACTTTCGACGACGGTGGGACG TGTACGTTCCCTAGAAACAAATCTTTCTCACCCCGCTCCCCAGGTATCTT GAGCCATAGGCTTTCCTCGAACTCCGTTTTCACCACTACTTGCACCACGT CAAACAAGTGTTCCTTGACCAGGAATCCAACTCCCCCCTCCCCCCTTTTC TTCGGGTCTAAGCCCTTTCTTGCCTTCCCTACCCACCGGCATTTCCCTAG TTTGCTTACCACGTCCCCATCGTTCAATTCTCACGTCTCTTGGATCCCCA CTACATCTAGATCGCTTTGTTCTAGTTGGTCCACGTTTTCCAACCGCTTG CGCTCACTCCTTGCGAACCCGCACACGTTCCACGACCCCACTCTCAGCTT GTGTTTTTCCCTATTGGAGATTTTGCGCACTCTATCGTTCGCCTTCCTCT TCTGTTTCTTGGCGTTCTTCTGACTTGCCTGCTCGCCTCCCCCGCCCGGT CCCTTCTTTGCCTCCATCGCCCTCGCCTCTTGTCTCCTTACCTTCTCTGT TTTCTGTCATGTTCGCGATGCAAACCCTCCATTCAAACTTCCTTACGTAG TTCGACAGCTTCTCGATGTCAACCCCCAAGCACTCTTGGCTGTCTCCCTT GGTCAATTTCACCGGAAATGTTCATGCTCTCTGCCTACGTCTCCCCTTGC TAGGCAGTGCAGTCCCTCCCTGTCACAACAGTTCTTGAACTCTATCCTCG TCATGTCCCTTGGAATCCCAAGCAGCAGCAGCTCCAACCTGTCTCCCACA GTTTCTGCTTCCATCCTCCCGGCTTCTTCACCATCCTCATGATCTCTACA GCAACTGGACCGCGGCCACTTGTTTTTCGTGTTTTTTCAGGAAGGTATAC GGAATACTCGGCCTTCCCAATCCGAGTGCCCGGTGGGGGTTGTGGTTCCT TTCAGTTCTTTTGCCGGCTCACCGACGCTAAACAGCGCCTCCAACATAGG CTCCCACCACGAAAAAACTGCGGAGCTAGATGTGCGGCACGCACAATGCA TTGTTTTCGATTGGAGAGAGGCGAGTACAAAGCAGCAAGGAATTGTCGGC CAAACTTTCGGCAGACAGGTCTACTCGGGAGCGCAAGTGGGGTAGCAACC CATATTGGAGCGTACATGAGAAGCTGGACGTTGGTGTACGCTCCATGCCG GCGTGTGAGTAGGATCTTAGGATATGCAAGTCGTCCCTGAACTTTTTGTG GTGAGCATGACCCCCCGGGAGGAAAGTAGCTTGTACCGCGGGACTTCGGA GATGATAAATTGGGTGGTCGGGGGACGTCTGGGAGTTTACTAAGCAGAAC GCCCGGCACAAGACTGGGGTACTTGTCCCAGGAGGTGTGAACTTGGATCT AGACTACAAGCCTATGTTGGGGGGGGGGGGTACTCATAATGGTGCATGCC GTAGTTGTTATACCGTTGACCTCGCATCCCTGCAAAGCCAGGACGGAGCA CGCCGAGTTCTCACCGGACCAGGCTCTCACATCACCAAGAGCGAAGCGCC GTGAGGTATTCGGCGAGTCGCATGAAGGGTGCGCTGCATCGTGCTAAGGG TGTTGGGGCCTCTTGTGCTTACTTCCTTGCGTACGGATGACAGCTGCGTA TGACTGAATTTATTTTCTGGTGCTTTCACTTCCAGAGACAGTTATAAGCA CTGTGTAACTGCCTCGAGGGTGCTTGACCAATTGAACACAACGTGGTACG AATATCCCCTTTGCGCGGAATGAGGGTTCTCCCCGCACAACATAGTCTAC TCGACCACCATTTATGGTTACCGCAACAAGAAAAACAGGAGCAAAAAAAA TAGCGGCAACCTGGTTGCCGAGCTCGCGAAGTGATCGGCTTGTTTTACAA CGTCGTTGCCAAGCGACGAAAACCCAACCCCGATGGCAAACACCGGGGGT GGGGGGCATCCCTCGGGGGGGATGTCTAATCGATATTGAAACTCCATAGT TCTCTGGCCCTCCATGCTTGCTTGTAAGGAGCCCATCCATGTCCGTCAAT GGTGTTTGGGGGGGTAAAATTTACATCAGTGTGGTTCAATAATAAGAGAT TCGATTCTTCGACGACGCAGGTGGTGTACGACTTCAGCAACAGCGCGATT GCCTTGCGGCGTCAGTTTGGCGCGGGGTTCACGATTGGTAGAATCCTGGA CCTCCAGCTGGCCTTTGAAGCTCTCCACGGGCGCTTCGGTGCGGATGTCG TGACAGTCTTGAGAGCTTTCGGGCAGCAGGTTTCCTACAGCGACGCCGCC TTCAGGTGCCGATTGCGTCCCACTGCTCTATTTATGCCGCCGGGACCGCT TGCTGTTCCCCTCCGCTCGGTTAACTGGCGTCGGTTTTGGTTGTCGCGCT GCGGAAGGTGCCACTTTCCCCTTTCTACATCCCTATTTTTCCCGGTGTCG CTTATAATTCGGAAGGTGGGGAAGTTTTGATACTGTACGGCACCGTGCGC GCATCGCTGGACGCACGTCACGTTTGACATAGTCGTACACGGCGCTGTGC GTGCATGCGAATGCGTTGCGATACATGTTGCGTTGTCAGAGCGCGACAAC TTTAGGCAATAATCATACGTCGTGGTCAAGAGCTCTTCTGCGTAGAGATT GAGGCAAAGTAGGACATTGTTATTTAGTTTCCACCTGCGGTTTGCTCATT GGCAAGAAAGTGGTTGTTTTGGCGCGAGTTCACGTCCACAGCTTAATGTT TCCTCCTCGCTTTTATTTTCCGCGCGACGGCATCGTACCACGTGTTGCAG GGCACTCAGCTGTGAAGAAGCGTCAACCATGAGGCGACCTATTGACACGA CAACATTGGGCTTGGCGGCACAGCCAGTCTTATCGCTTGCCAAGGTGTGC CAGTAACGTTGAAATCCGCTGCTTTCAGAATGAGCAGGAATCGATTCTCG AAGTCAACCAGTGCTCTTTAACTTGACGCCCCATGTGCTGCAGCATACAA TGTACGCAAGGCGGTTGGTAGATGTAGAATCAATTTTCTCGGATGTTTGT CGTTGTTCTGTCTTTGCGGCCAGGTCACGGAAAGCGCCGTCTTGAGTCTG TCCAAGAAAAGGCAAAAGGACATCGTGCTGGAAGCTTCTCAGGTCCGGAA CAATCTTCATGCTAACTACAAACACCAGCGTAAGCTGTGCGGTGAATCTT GCAGACTTACGACACAATGGCAGCAGGATGAGTGTATATTAAACAGTTAA ACGGTATCCCTTTGCACGACAACGCAGATGGAGTTATATTGTAGTCGCTG GACGAAGGACATGCCGCAAATACTCTGTAGTCACCGTAGGTTGACGCGAA ACCACTAATAATTCACACATACCCCCCACCCTTACTTTCCAGCGGACGAC AGAGTTCGCCATGTCCTCCTGGAGCCAAGACACGCGGAGGATGGCGTTTC GCAACCACGGTTCTTGCTGGGGAGGCGGGGTCGGGAGAATTCTGACCAGC TTCGAGCTCAAGCACGTATCTGCTTTCCCGGAAAACATCGTGTATGGTTT CTTCAGGCTTAAGGTTTACATATGTCCAATGCGACCTACGCTGTATAATG GCAGCAAGGCCACGTTCTCTACAGGTGCTCTTGGCCGCAAATACTCGAAC GCTTCAACCCTCAACGTGCCTCGGCCGTTCGTTGTCTAATGGTCTCGTCA GGCCAGAGAGAAGGTCGGGCTATCGGCTCCTTCGGGACAGGCGCTGTCCT CGAACGCGACACCGGCTGTCATCGGCGACAACGACCCCACGTACGTCCCA TTGTCGGGCCTAGAATTGGGGGAGCAGCTTCGCGTCCGATGCAAAATGTA GCGAGTTTGAGCTACAGCACGTAGTCGGAGAAGAAACGTAGCCCCACGAC CGTGCCATTCTTTGAATATAACTGGGTGGACGCATGCCTAGTGTTGTCGG TACATGGCACGATTAGAAAATGGCAGCATTTATTTGTTCGGCTGTGGCAC AAGTATCGGCCTGGAGGCTTATGAATGGACTACGCTTGCTAACCTCTCTT CGTCCCCCTTGCAAAGCCCTGATTGCTGAACTGGGTATTACCCTTGTTAC TGTAGTGTTAGGTCGGCCCTTGACAGCTTGGAGCAGAATGATGGCGTGGA GCGAGATCCCAACTCTCCCCACGAGATTCTGGAACTTATTCCTGAAGACT TTCTCGAAGAACACCTGACAGAAAGGTGAGCGGCGCGTGATGTTGGAGAG AGTCACGTAGATTCGGCACGGAGCTTGTATTTTGTACGTTGGGGCTGACA TGTGGCTCCGGCTAGATGCGACAGCTGGCAGCGTGCCCCATGTACATGTT CCGGTCGGCTAGGCTATGTCTCTCCCCCGTGTTCGTCAAAGCGAAAACCA CATACCACGATGGGCCTTTGATGTTCGCTTCTCACGAACAACACGCAACA ACGCCGCGTTGGATTCAAAACACCACGGCGCCTCCAAACCTCGTGAAAGT TGTCCACATGCACCAGAGCTAGGGCGCACGGCCTTGGTAAGGAACTACAT TTGTCCTTGTGGATTCGTTTGGTGGGTTATCTTATCAAGCTCGTTTGCCC CACTGATTCTACGAAACATGTGGAGAGCATTTTACGTGTGTGGTAGTACA CGCTGAAGCATTAAACCTCGCCAATTGTGAATATTCCATGCCCAGGCACG TGCAGAACGTACAGGATCTGAACGAGCTCGTTCTCGACGAAGGAAGGAGG CCCTACGCCACTCTGCAAGGTATGGGTTCGAGTACAGACCTGATGCGCGC AGCATCTAAGAGGCTTCTCTAGCCGACGTGGCAATGACAATAGACCCTTC TCTTCAACGCTGGTTATCAAGACCATTAAAAGGGTGGAGCCCCCTTTCCA CCCTTTCTGATTCCTAGGCACTATTGTTGTTGTCCATCTTGAATGCAAAA CGCGAGCCCTTCTCTGAGCGCGTGGTGGACAAGTACACAATACCCAATGT GTGTTCATTCAAGCAAAGGTTTTCTTCGAACAATCACGGCCGTTTCCTTT CCTCACGGCCGCCTGCATGCTCTCTCCCTCTCTCTCTCTACGCTCAGGGC GCGGAAAGCTGTTCCTCTGCAGCGACAAGAGTGTGGTCGTGACCAAAGAA CACATCGACATGGTCGTTGGGCGGCTCGACCTCGAGGGCAAGTTCGCGGG CGACAACCGAGCGGGCGTCCCGGGACAGCTGCACCGCATCAGCGTCATGA GGGGCAGGGAGGTAACGATCCAGGAGGCCGCTTTCGAGCGCCCAGCCGAA ATCAAGGCCTGCTGCTCGTCCAATTGTTCTTTCTCGGCATTCGAAACGAA TTTCCAATCGTGTGTTAAAGCGCCGCTGGTGGAGTGCGTGCGCCGCGTAA CAGTACTGTTGATGATATGGCGGAACGGTTGGCTTGTGGACAAGTGTTGT GTTCGGCCGATGGCGTGCGCTCTTGTAGGCATGTACGTGGCAGGCGCCCT TCGTGACTAAGCGCGTCCGTTTGTTCTCGGGGCTGAAACTTGCGTCGTTG AGTCAAAGTCCGTAGAATAGAAGAAACGCGTTTTCAAGCGGTTTTTTGTG TGTGCTCGTGTGTTGTGACCGTATGGTATACAGGGCAGGCGGATCTTCGG CGTGACTCTGCGGATTGGCCGTTACTTCCCGGGTAGTGCAGGCTTGGTCG ACGACCTGCTCTTCCACGTGCAGGGCAGCCCCGGTGAGAGTACACTTGTA CATCCCATCAACGTTTGCTGAGTGGACACTACAGTGTTGCCTTTGAGACT CTGGCCCCCGGTCCGCCTTGTGGTGTAACGACGCTGCGAGTGTCGCACGA GTGTGCCGCAGTCCTCCAACCAGGGCATACTACGCGTCGTTGGCGGCCAG AGTGTAGTTGAACCAGGGATACGTTTGAAGCATATAGCAAAGAGCCAGCC GCCCGCGAAGGCTCTGACCAGCCTAAGTCTCCGAGAAAGTCGCGAGCAAC ACCTACCCTTTACGCTATAAAACTTGCACTGATGAAAATCGCATATTCTG CCCGAATTTGCGCATTCGCACGCCCTTACCCGCAACCACGCGAACATTGG CCACCGCCGCTCTTCTCCGTCACATCAGACAAGCCCGAGCGTGCCGCTTC TGTCCTTGTGCTGGGCAAGCCAGGGTGTGGCAAGACCACCGTCCTTCGCG ACATCTGCCGAAAGATCTCCCAGGAGCAGGTGACAAATGCTCTACCAACT GTTGTTGCCGTCTGTTGGACACGCACACACCCCATGGAGAAGGCTTGGCT TTTGCCTCGTTCTTGCTCCAGTGACGAAACCACACTCGCACACCAGACAT GCGTCAAGATGCGGGACAGACGTTCTGGGAGATGTTGTTTGTTTTGTAGC AGCGAGCTTTGTATTCGCCCTAGCCGGAAGTGTACCGTCTACTTCATCCC CTGGTTAGGCCGTGAACGATCTGATGAATCTGACTTGAGTCCACGCTCTC TATTGACGCTGCCTGCGCCATGGTCAGACCGTGGTGATTGTGGACACGAG CAACGAGATTGCCGGCGACGGCCACATCCCTCACCTCGCGGCCATCGGAC AGAGCCGGAGGATGATGGTTCCGGACAAGACAGACCAGCACAAGTACGCC TTGCTTCCTCTTCCTCACACGCGGGACTCGCGCGTCGCGCTGCTGGTCGC CGCGGGTCAATCACGATGTCGTCGGTCCTTCTTGTTGGTGTAGCTGCCCT TGTTTCGAGGGGCGAGACAGACAGGTTCCAACAGCCAGCCTATCTACACA CAGTCACACATCACTTACTGTTTCTAAGTATTGACCGACGTGACTCCAGA GACATTTCTCCGCATCCCTGTTATTGGCGTCCTGCCATACGTTGGGTTGG ATGCGCCGATGTGCGTAAATGTCCGGGTCTTTACTGACTCGCTTGCATCG AAAGGGACGACGATTCGGGGTGCAAGGTAGTGAGTGAAGGTGCGATCATT CTGTGGGTGGGTGTAGCTGTGCCACCGCGTTCATGAGGAATATCTTTCCG TTGTTGAAAAGGAGGAAATTCGGGTCTCATGTTGTTGTTCGCTCGTACTC ACCGCCACTTCTTCTTGAACGTACGTGTGTGCGAACAGGGTTGTACAGCG CGGTATTCCGCTCACGTGCTCGTTCTGCCTTTCCCTTGTGTGCGTTGGTT TCTTTCTATTACCCTGGTGTGTACAAATCAGCGTGATGAAAGAGGCGCTT CAGAACCACACGCCCCAGACGATTGTGGTGGATGAGGTATCCAACAAGAA CGAGGCTAGGGCATGCTTGGACATCAAGGCTCGGTAAGGCGCCCTGAGAT GTAGCATCCATTGATGTGGAGAACATTTTGGTACCTTTGACGTTGCCCAA CCTTCTTCAATCGAATCAATGAGTGAGTGACACTCCTGTACACCACACTC CTGCACACCACCCTTCTGGCTTGGCGTTGCGAAATCAATACGTGTCTTGG CACACCCGGGTAGCAGAACAGGCAAGGGCTACCGGCTAGACTACCGGAGA CGTACAATACTCGCCTGTGGGTAAAGAGGGAGCATGAAAACCTTCTTTTT CCCTCCTTCTTACGGAACGCTCTGTCGCTCCCAGAGGCGTCCGTGTGGTG GCGAGTGCCCACGGAGACTTGCAATCGCTGCTCGAGAACCCGGAACTCAA CACTCTGGTCGGAGGCACGACAAGCGTAACCCTAGGTGATGCGATGGCCA TCGCTACCAACGCGGGAAACAAGGTGCGACAACGCGAAGGAGCTAAGCAC GCATGGCGGGACCGGCCTTACACCCGATAACAGGAACACTAGCCCGCCAC TCGAACGATCCACTCTGTGTAGTCGGGTATGTTGAGGGTATTGCTGGCTG GTAAAACGTTGAGTGTATCGTTGGCGAGCGTGGGGGGAGCAAGGCAATCG CGTTTCACGAAACAAATGCTCCTTGCCGACCATACGTTTTGTTGTTGGGC CGAAAGGCTACGAGTGGGGATGTCTTTGCAAGCGCCAGCTAAGGTACGGG ACCGTGGCTGGCAAAAGAGATCGCGAAACTTTTTCGATACATGTGGGTCT TTAGGCTGACCTGACATTGCGTCCGATCGATACCACGGCCAGGAGGTGAA ATTTCTTGTCTCTTCTCTATGTAGTCAGCGTCACTGAGTTACGATCAGCA ACGCTTTGCCCAAACGTATGGAAGCCATGGGAACATCGTAATAGTATGGT CTTGCATGTGCGGCTAACACAGGTCCAGAGGCAGCGAGCCGGTGCACCGA TCTTTGACACGATCGTAGAGCTAGAGCGGGGGCAAGTGAACAAGTGGACC ATCGTGTGGAATGTCGACCTCGCTGTGGACGCTATCCTGAGCGGGAAGCC GTACAAGGTGTCGCAGAGAACCCGCATCCCGAATGACTCGGGCCTCCAAC AAGCGGTGAGCGCATCGTAGGTGTAAACCCACGTGGTTGACAGTCCTTCG CGCTGCTGGTATGAAGGAATGCCTCTGAAACGAGTGATTGCTATGCAAAT CAAGAAGATTGTTGGCACCGAGACCACTAACATGGTGACACACACCAACA GCCGAACATACTATTAACTGTGGAACGAAGAGGCGGGCTCCACCTGTGTT CTCTCAGCTGGGTACTGTTGTGCTGCTTTCTTTTTCACCTTCAACGCCCT TCTCAATGGGAAAGAAAACATTTTTTTCCTTGCTCAGAAGCTCACCAGGA ATACGGTAACACACATGAATAAGATTCAGAGTCGGCACGTTTCTTCGCTC ACTGGTCACCACCCGAGTCACCTAACTGGATACTGAGCCTGTACCCTCCT CGAGAGTTCTGTCTGGTTGCGTGCTGCCGGGCGTGTTGGCGTGTCTGGGT CTATGGTACCGATTTTCCACCAGGTTGCGAACTAATTCCACGTGCTCATA TACCTCGAGCTTCCCCACGCACACCTCTCCCTTCCACTCTTTGCCCAGGG TGCTGACCACGAAGATGCGGCTTTCCTTCTCAAGCACGCCTACGCGATGG AACAGACCAAGCAGTACTACTGATTGGAAGTCGTTCGCGGGGCGGTGAAA AGGGTATAATGGTCCTTGAACTTGAGTCTTTGATGCCAAGGTACTGTAGA CCATGGATACGTACACCAGCCTTGGCAGAGATGAGACAGGTTTTTGGAGT ACGCTGGCGTGTGTCCGATTTTGTGTGTCTGAATTGCGAGCCCCCGTTGA TTTGCAAACTGCCAGAGGCAGAGCTTAGTGTGAGCTGATGATGCATGGCT GTCCAGTATAGAACGGAGGGATTCGGTCGGGACTTTCGATCGATGAAGCG TAGCTTGAAGGTGTGTATTCGTTGTAGAGATAACGTTTAAGGTCTCACAC GAATGATGCCATCGGAGTGGGTACCACAATGTTACAAATATTGATCCTGA AATGTGTTGAGACTGAATGTGTTGAACTGACGAAATAAAAAGAATTTGAT AACGCGATCTCTCACAGGGATGGGGGGGGAGGTGAATCGAAAGCAGTTTG TCCGACGACGACGAGAGTAGTGCGAATGTTTGTTTTATTCCCCGTTCGAC AACGAGAGGCGTTCTCAGACGTGTGCCTTCGACCTACTCTAGTTTTATTG ACAGTTGCCATCTTGCAGGGCTCGCTGTTTTATGTACGTCCCACGAAAAT CACCTAGAGGTGTAGACCAAACCCAGGGGTCCAGCGTGGAGGAGATTATC AAACACAGAACAACGATAAGGATCATTCGAGTTTCGAGAGCTGAACATTC GAACAAGTGGGACTCCGAGAATTCCCGCAG
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Coding sequence (CDS) from alignment at chr_28:439635..453364+

>Ec-28_000420.6 ID=Ec-28_000420.6|Name=Ec-28_000420.6|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1584bp|location=Sequence derived from alignment at chr_28:439635..453364+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGGGAGCATGGTAGTAGTGCACCTCAGCGGGCGCCAGCTTGGGTCTGA
ACACGGATCTATTTCGCTCATCAAGGTCGTGGGAAAAATATCGCGTCCGC
CGGTCCTCTTTGACGTTGTGGAGCTCAGCAAGACTAAGACTCGCCAGAAC
TTGTTGCTCAATAAGCTGTCCCCGCTGTTCGCAGACCAGCGGTCGACAAA
GGTGGTGTACGACTTCAGCAACAGCGCGATTGCCTTGCGGCGTCAGTTTG
GCGCGGGGTTCACGATTGGTAGAATCCTGGACCTCCAGCTGGCCTTTGAA
GCTCTCCACGGGCGCTTCGGTGCGGATGTCGTGACAGTCTTGAGAGCTTT
CGGGCAGCAGGTTTCCTACAGCGACGCCGCCTTCAGGGCACTCAGCTGTG
AAGAAGCGTCAACCATGAGGCGACCTATTGACACGACAACATTGGGCTTG
GCGGCACAGCCAGTCTTATCGCTTGCCAAGGTCACGGAAAGCGCCGTCTT
GAGTCTGTCCAAGAAAAGGCAAAAGGACATCGTGCTGGAAGCTTCTCAGC
GGACGACAGAGTTCGCCATGTCCTCCTGGAGCCAAGACACGCGGAGGATG
GCGTTTCGCAACCACGGTTCTTGCTGGGGAGGCGGGGTCGGGAGAATTCT
GACCAGCTTCGAGCTCAAGCACGTATCTGCTTTCCCGGAAAACATCGTGT
ATGGTTTCTTCAGGCTTAAGGCCAGAGAGAAGGTCGGGCTATCGGCTCCT
TCGGGACAGGCGCTGTCCTCGAACGCGACACCGGCTGTCATCGGCGACAA
CGACCCCACTGTTAGGTCGGCCCTTGACAGCTTGGAGCAGAATGATGGCG
TGGAGCGAGATCCCAACTCTCCCCACGAGATTCTGGAACTTATTCCTGAA
GACTTTCTCGAAGAACACCTGACAGAAAGGCACGTGCAGAACGTACAGGA
TCTGAACGAGCTCGTTCTCGACGAAGGAAGGAGGCCCTACGCCACTCTGC
AAGGGCGCGGAAAGCTGTTCCTCTGCAGCGACAAGAGTGTGGTCGTGACC
AAAGAACACATCGACATGGTCGTTGGGCGGCTCGACCTCGAGGGCAAGTT
CGCGGGCGACAACCGAGCGGGCGTCCCGGGACAGCTGCACCGCATCAGCG
TCATGAGGGGCAGGGAGGGCAGGCGGATCTTCGGCGTGACTCTGCGGATT
GGCCGTTACTTCCCGGGTAGTGCAGGCTTGGTCGACGACCTGCTCTTCCA
CGTGCAGGGCAGCCCCGACAAGCCCGAGCGTGCCGCTTCTGTCCTTGTGC
TGGGCAAGCCAGGGTGTGGCAAGACCACCGTCCTTCGCGACATCTGCCGA
AAGATCTCCCAGGAGCAGACCGTGGTGATTGTGGACACGAGCAACGAGAT
TGCCGGCGACGGCCACATCCCTCACCTCGCGGCCATCGGACAGAGCCGGA
GGATGATGGTTCCGGACAAGACAGACCAGCACAAGTACGCCTTGCTTCCT
CTTCCTCACACGCGGGACTCGCGCGTCGCGCTGCTGGTCGCCGCGGGTCA
ATCACGATGTCGTCGGTCCTTCTTGTTGGTGTAG
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Synonyms
The feature 'Ec-28_000420.6' has the following synonyms
Synonym
Esi0120_0074
Esi_0120_0074