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Homology
BLAST of Ec-28_000350.1 vs. uniprot
Match: D7FII0_ECTSI (Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FII0_ECTSI) HSP 1 Score: 707 bits (1826), Expect = 5.900e-254 Identity = 437/437 (100.00%), Postives = 437/437 (100.00%), Query Frame = 1
Query: 145 MVPPRNKQQSTTIGFDGFSQRSSCERSSTSTCGVGDVILEFCTPGARSPIDFVDATTAAAASCRGRPCGGNTTCYAHGSSRDVRPPVLLRQQSAPASSTARPSAEASVYTGKHHRRTSTPPLDGARLTLLGVSKALNTPVQDNWEVARALLESNTDLRTRNDRGMTPLHLACSTGEVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKASDLGTTALHNAGFTPLHVAARCGRLTALRALLDAGEAVDSPSTPAXXXXXXXXXXXXXXXXXXELLLRGADPSRRNKRGATPLDMGGPETMSGKAKLAREAFEKKLAEGERVRLALTSAQRWQRKRGMVLVCETLRKRANAVLALADGASDGGALAGRERLERDHGDTKRRFRRSLAGGSVASAVPSQGWLVAQLCVHADPALMKGVIEFL 1455
MVPPRNKQQSTTIGFDGFSQRSSCERSSTSTCGVGDVILEFCTPGARSPIDFVDATTAAAASCRGRPCGGNTTCYAHGSSRDVRPPVLLRQQSAPASSTARPSAEASVYTGKHHRRTSTPPLDGARLTLLGVSKALNTPVQDNWEVARALLESNTDLRTRNDRGMTPLHLACSTGEVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKASDLGTTALHNAGFTPLHVAARCGRLTALRALLDAGEAVDSPSTPAXXXXXXXXXXXXXXXXXXELLLRGADPSRRNKRGATPLDMGGPETMSGKAKLAREAFEKKLAEGERVRLALTSAQRWQRKRGMVLVCETLRKRANAVLALADGASDGGALAGRERLERDHGDTKRRFRRSLAGGSVASAVPSQGWLVAQLCVHADPALMKGVIEFL
Sbjct: 1 MVPPRNKQQSTTIGFDGFSQRSSCERSSTSTCGVGDVILEFCTPGARSPIDFVDATTAAAASCRGRPCGGNTTCYAHGSSRDVRPPVLLRQQSAPASSTARPSAEASVYTGKHHRRTSTPPLDGARLTLLGVSKALNTPVQDNWEVARALLESNTDLRTRNDRGMTPLHLACSTGEVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKASDLGTTALHNAGFTPLHVAARCGRLTALRALLDAGEAVDSPSTPAXXXXXXXXXXXXXXXXXXELLLRGADPSRRNKRGATPLDMGGPETMSGKAKLAREAFEKKLAEGERVRLALTSAQRWQRKRGMVLVCETLRKRANAVLALADGASDGGALAGRERLERDHGDTKRRFRRSLAGGSVASAVPSQGWLVAQLCVHADPALMKGVIEFL 437
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 718.8 |
Seed ortholog evalue | 1.6e-204 |
Seed eggNOG ortholog | 2880.D7FII0 |
Length | 1460 |
KEGG ko | ko:K15503 |
Hectar predicted targeting category | other localisation |
Gene id | Ec-28_000350.1 |
EggNOG free text desc. | response to abiotic stimulus |
EggNOG OGs | COG0666@1,KOG4177@2759 |
COG Functional cat. | G |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko01009,ko03400 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ec-28_000350.1 ID=Ec-28_000350.1|Name=Ec-28_000350.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=438bp MVPPRNKQQSTTIGFDGFSQRSSCERSSTSTCGVGDVILEFCTPGARSPI DFVDATTAAAASCRGRPCGGNTTCYAHGSSRDVRPPVLLRQQSAPASSTA RPSAEASVYTGKHHRRTSTPPLDGARLTLLGVSKALNTPVQDNWEVARAL LESNTDLRTRNDRGMTPLHLACSTGEVDAAKVLLLAGADSHARDHRSRCP LHMAALSGKSELVSSLLTCGADPNKASDLGTTALHNAGFTPLHVAARCGR LTALRALLDAGEAVDSPSTPAGTTPLHLAAGFSRLSCVEELLLRGADPSR RNKRGATPLDMGGPETMSGKAKLAREAFEKKLAEGERVRLALTSAQRWQR KRGMVLVCETLRKRANAVLALADGASDGGALAGRERLERDHGDTKRRFRR SLAGGSVASAVPSQGWLVAQLCVHADPALMKGVIEFL* back to topspliced messenger RNA >Ec-28_000350.1 ID=Ec-28_000350.1|Name=Ec-28_000350.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1460bp|location=Sequence derived from alignment at chr_28:391730..395553- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.
TTGGTTATAGGCTCTCTCTCCCATACTGGTCCGCTCGGTACTGTCGCATC ACACCGGAGCCAACAGAGAACGCAAGCAGCAGCGGTTTTTAGGGAGACGC TGAACAGCAGTTCAAGCACAGCCTCTTGAATACGCAGCACACAAGCATGG TGCCACCCAGGAACAAGCAGCAGAGCACCACCATCGGCTTCGACGGGTTC TCCCAGCGGTCCTCTTGCGAGAGGTCGTCGACGTCAACATGCGGGGTTGG CGACGTGATTCTAGAGTTTTGCACTCCCGGCGCTCGATCCCCGATAGACT TCGTCGACGCAACAACGGCGGCGGCGGCATCCTGCCGCGGGAGGCCTTGC GGGGGAAACACCACCTGCTACGCACACGGCAGTAGCAGAGATGTGCGGCC ACCGGTCTTGTTGCGACAGCAGTCGGCGCCGGCATCGTCGACGGCACGAC CGTCGGCCGAGGCCAGCGTCTACACGGGCAAGCACCACCGCAGGACGTCG ACGCCGCCGCTGGACGGCGCGCGTCTGACGCTGCTGGGCGTGTCCAAGGC GCTCAACACTCCCGTCCAGGACAACTGGGAGGTGGCCCGGGCGTTGCTGG AGTCCAACACCGACCTCCGGACAAGAAACGACCGCGGGATGACCCCTCTG CACTTGGCATGTTCAACTGGAGAGGTGGACGCGGCGAAGGTGCTGCTTCT CGCCGGCGCGGACTCCCACGCGAGAGACCACAGGTCTCGGTGCCCGCTGC ACATGGCGGCCTTGTCGGGAAAGTCGGAGTTGGTGTCCTCCCTGCTCACG TGCGGTGCGGACCCCAACAAGGCGTCCGACCTCGGCACGACGGCACTCCA CAACGCGGGCTTTACTCCCTTGCACGTGGCGGCAAGGTGCGGGCGCTTGA CTGCCCTGAGGGCCCTCCTGGACGCCGGCGAGGCCGTGGACTCGCCGTCC ACCCCCGCGGGCACCACCCCGCTCCACCTCGCGGCCGGGTTCTCGCGGCT GAGCTGCGTGGAGGAGCTCCTCCTGCGCGGCGCCGACCCTTCGAGGAGGA ACAAGCGCGGCGCCACGCCGCTGGACATGGGCGGGCCCGAGACGATGAGC GGCAAGGCCAAGCTCGCCAGGGAGGCGTTCGAGAAGAAGCTGGCGGAAGG GGAGCGGGTGAGGCTCGCCCTGACGAGCGCGCAGAGGTGGCAGAGGAAGC GGGGCATGGTGCTGGTGTGCGAGACTCTCCGCAAGAGGGCTAACGCTGTC CTCGCGCTTGCTGATGGCGCATCCGACGGGGGTGCGTTGGCAGGGAGGGA GCGGCTCGAACGCGACCATGGCGACACCAAGCGCCGCTTTAGGCGTTCCC TAGCTGGCGGGTCGGTCGCATCGGCCGTCCCTTCTCAGGGGTGGCTGGTC GCGCAGCTCTGCGTGCATGCCGACCCCGCGTTGATGAAGGGCGTCATTGA GTTTTTGTGA back to topprotein sequence of Ec-28_000350.1 >Ec-28_000350.1 ID=Ec-28_000350.1|Name=Ec-28_000350.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=438bp
MVPPRNKQQSTTIGFDGFSQRSSCERSSTSTCGVGDVILEFCTPGARSPI DFVDATTAAAASCRGRPCGGNTTCYAHGSSRDVRPPVLLRQQSAPASSTA RPSAEASVYTGKHHRRTSTPPLDGARLTLLGVSKALNTPVQDNWEVARAL LESNTDLRTRNDRGMTPLHLACSTGEVDAAKVLLLAGADSHARDHRSRCP LHMAALSGKSELVSSLLTCGADPNKASDLGTTALHNAGFTPLHVAARCGR LTALRALLDAGEAVDSPSTPAGTTPLHLAAGFSRLSCVEELLLRGADPSR RNKRGATPLDMGGPETMSGKAKLAREAFEKKLAEGERVRLALTSAQRWQR KRGMVLVCETLRKRANAVLALADGASDGGALAGRERLERDHGDTKRRFRR SLAGGSVASAVPSQGWLVAQLCVHADPALMKGVIEFL* back to topmRNA from alignment at chr_28:391730..395553- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Ec-28_000350.1 ID=Ec-28_000350.1|Name=Ec-28_000350.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3824bp|location=Sequence derived from alignment at chr_28:391730..395553- (Ectocarpus species7 Ec32 male_plus_femaleSDR) TTGGTTATAGGCTCTCTCTCCCATACTGGTCCGCTCGGTACTGTCGCATC
ACACCGGAGCCAACAGAGAACGCAAGCAGCAGCGGTTTTTAGGGAGACGC
TGAACAGCAGTTCAAGGTGAGCAAGGGGATCGTGCTGCCTGCTCAGATCA
AGAGGAATTCCTATACCACAGCAGCACACTCAGCTTCTAGTGAAGCTCTC
TCTCTCTCTCACTCTGTCGCTGCTGCAGCAGACATCGATCGGTCACCCCG
CCGACCGTCGATACTTTTCTTCCGCACTCAAGAGGTTCAGTCGGCCTTTT
CTCCTTCGATGAGGTAGCGTGCCGTACGTTCGTACTCTCTATACTGCGTA
GAAGCTGTGCCTCTTGCGGTTTCTTTGTCTCCCTTTGTCCTCCGTTCTCT
CTGCAAGGAACCCCTTTTGCTGGATGACTTCAACTATTGCTTCTGCTGAG
TCCGCAAAAGGAGGTCAAACCTTGGATCAGAGGATCGGGCTCGTGTAAAA
CTTGCTCGATGAATTCACCACGTCGTACATGCAAACACAATCGTTAAGAG
CGGAGGTTGCTCGGTGCAAAGGTCCCAGTATCTATATGAGCATCGCTGTT
TTGGCGCCGGGCCGCCACCACTAATGCTATTACCCCACATACACGGTGAC
ATACGACGACTCTTGATTTGATGTCACGTACGTACAACTGCTGTACATAC
ATCCGCATTTTTGTCGAACCTGTCCGTTACTGCTGTGGATTTTGTGGCAT
GCAATATGGGTGAGAGACAGCACAGCAAGTCATGGGCCTTTACCGTCCGC
ATCAGCTTCGAATCTATGCATGTACAGCACGTCTCTTCTAGGCACACGTA
CAAATAGCTGCATACAGATTACTGCTGGAATGTAGTCGGGAAAGAACGTG
AGTGTAGTGCAGTCTACTACCCAAGTAGACTTGAACGCTGTAGATGCCAC
GTTTGAAACGTGTTCGTGGCAACATGACGCGCGTCCTGTCTGTCTTGCGT
TGGTGAGGATGGTTGTACCAGTGGCCACGTTGCTCTCTCCTATCTCTCTA
CCTCGCTTCCCACGCACTCCCAAGCCAAACCCACGGCGGTTGATGCGCAG
GGCCGATAAGATTCATCGACACACACGCAGCAATTTCTCATGCCAATCCC
CCGCGGGTCTGGACTGAGTTGGTGCTCTCTTCCTGCCTTGTCCGCTTTCC
GTTTTACTGCATTCTACAGCACAGCCTCTTGAATACGCAGCACACAAGCA
TGGTGCCACCCAGGAACAAGCAGCAGAGCACCACCATCGGCTTCGACGGG
TTCTCCCAGCGGTCCTCTTGCGAGAGGTCGTCGACGTCAACATGCGGGGT
TGGCGACGTGATTCTAGAGTTTTGCACTCCCGGCGCTCGATCCCCGATAG
ACTTCGTCGACGCAACAACGGCGGCGGCGGCATCCTGCCGCGGGAGGCCT
TGCGGGGGAAACACCACCTGCTACGCACACGGCAGTAGCAGAGATGTGCG
GCCACCGGTCTTGTTGCGACAGCAGTCGGCGCCGGCATCGTCGACGGCAC
GACCGTCGGCCGAGGCCAGCGTCTACACGGGCAAGCACCACCGCAGGACG
TCGACGCCGCCGCTGGACGGCGCGCGTCTGACGCTGCTGGGCGTGTCCAA
GGCGCTCAACACTCCCGTCCAGGACAACTGGGAGGTGGCCCGGGCGTTGC
TGGAGTCCAACACCGACCTCCGGACAAGAAACGACCGCGGGATGACCCCT
CTGCACTTGGCATGTTCAACTGGAGAGGTGCGTGTATTCTTGGCTGGCAG
CGTTGTGCCTACTACTGTATGTGAGTAAATTCTTGACACCTTTGATTGAC
TTTCAGTAAGACTCCTGCTGTCCACTTGCAAGGACAAAATGGTGTTGGGG
ATTCCACGTGGGTGTGCTCTGGATGGTCGTAGGAGTAGGTGGCGCTCAGC
GTGCTTTTTTGTCACGCCGCCGTGCTCGGGTAGAGCATCCGTCAACATGA
CATGTCGGACAAATAAATACCCAAACACATTCATGTCTCTCCGTGTGGCA
TTTGTTGAGGCCAAGGACCGCAGGCAGCAATGTACTACAGCAGTCTGTTG
AAGTGATCTAACGTAGCATGTCCCCGGGATTGGTGGGTGTTGCAATCGTC
TCAGGTGGACGCGGCGAAGGTGCTGCTTCTCGCCGGCGCGGACTCCCACG
CGAGAGACCACAGGTCTCGGTGCCCGCTGCACATGGCGGCCTTGTCGGGA
AAGTCGGAGTTGGTGTCCTCCCTGCTCACGTGCGGTGCGGACCCCAACAA
GGCGTCCGACCTCGGCACGACGGCACTCCACAACGCGGTAAGATGTCGGA
GCGAGCGGTTGTATTAGCCGGCCGTGGGGCCACCACAACAACGCCATTAC
GCGACGAGCAATGGGATTAGGCATGCATGCACGTGTTTGCCCCCCCCCCT
CCCCCAATGTCCCGGAAAAAAATCTTCGTCAATCACCCGTTTATCCGACA
CATTTGTCTTTGAAGTCCAGCTCGTATATGCCCGAACAGGAAGCAAACAA
AGTAGAACCATTCGTAACCGCACCACGTACAAACACCGATGCGCGGGGTG
GCGCACTTGGTGGAGCATGGGAGTTTTACTTTGCGCCTTTTGTCTTTTGA
CGCTCCTCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNACACAAGCTTCAAAACCACCG
GGGGGGGAGGTAAAACCCCGATACCAATCAAAAGGGGTTGGGGGTTGGGG
GGGTTGAAAGGAAAACATGCCCGGGGTTTTTTTTTAAAAAACGTTTTTGG
GGGTACGCAAATGAAGAAATTTCCCACGACGGCGCTTTGGGCCCCACCAG
GGGATGCCTTTTTTTTTTTGAAAAGTAGAAATTTTGTGGTACGAAAGGCC
CCCCCCCCCCATGTACGTGTTCAGGAAAAAAGTTCCCTTACCCCGGCCCC
CACTAGACGAAGGCCACCCCGCCCCCCCCCCCCCTACGCTGTGTTTTTTT
CGCCTCTACTATTGTCGCAGGGCTTTACTCCCTTGCACGTGGCGGCAAGG
TGCGGGCGCTTGACTGCCCTGAGGGCCCTCCTGGACGCCGGCGAGGCCGT
GGACTCGCCGTCCACCCCCGCGGGCACCACCCCGCTCCACCTCGCGGCCG
GGTTCTCGCGGCTGAGCTGCGTGGAGGAGCTCCTCCTGCGCGGCGCCGAC
CCTTCGAGGAGGAACAAGCGCGGCGCCACGCCGCTGGACATGGTGGGTAC
CCTCGTCATCCCCGTCAGCGCTCGCCCCGCCCCCGCCACCCAGGGCGGGC
CCGAGACGATGAGCGGCAAGGCCAAGCTCGCCAGGGAGGCGTTCGAGAAG
AAGCTGGCGGAAGGGGAGCGGGTGAGGCTCGCCCTGACGAGCGCGCAGAG
GTGGCAGAGGAAGCGGGGCATGGTGCTGGTGTGCGAGACTCTCCGCAAGA
GGGCTAACGCTGTCCTCGCGCTTGCTGATGGCGCATCCGACGGGGGTGCG
TTGGCAGGGAGGGAGCGGCTCGAACGCGACCATGGCGACACCAAGCGCCG
CTTTAGGCGTTCCCTAGCTGGCGGGTCGGTCGCATCGGCCGTCCCTTCTC
AGGGGTGGCTGGTCGCGCAGCTCTGCGTGCATGCCGACCCCGCGTTGATG
AAGGGCGTCATTGAGTTTTTGTGA back to topCoding sequence (CDS) from alignment at chr_28:391730..395553- >Ec-28_000350.1 ID=Ec-28_000350.1|Name=Ec-28_000350.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1314bp|location=Sequence derived from alignment at chr_28:391730..395553- (Ectocarpus species7 Ec32 male_plus_femaleSDR) ATGGTGCCACCCAGGAACAAGCAGCAGAGCACCACCATCGGCTTCGACGG GTTCTCCCAGCGGTCCTCTTGCGAGAGGTCGTCGACGTCAACATGCGGGG TTGGCGACGTGATTCTAGAGTTTTGCACTCCCGGCGCTCGATCCCCGATA GACTTCGTCGACGCAACAACGGCGGCGGCGGCATCCTGCCGCGGGAGGCC TTGCGGGGGAAACACCACCTGCTACGCACACGGCAGTAGCAGAGATGTGC GGCCACCGGTCTTGTTGCGACAGCAGTCGGCGCCGGCATCGTCGACGGCA CGACCGTCGGCCGAGGCCAGCGTCTACACGGGCAAGCACCACCGCAGGAC GTCGACGCCGCCGCTGGACGGCGCGCGTCTGACGCTGCTGGGCGTGTCCA AGGCGCTCAACACTCCCGTCCAGGACAACTGGGAGGTGGCCCGGGCGTTG CTGGAGTCCAACACCGACCTCCGGACAAGAAACGACCGCGGGATGACCCC TCTGCACTTGGCATGTTCAACTGGAGAGGTGGACGCGGCGAAGGTGCTGC TTCTCGCCGGCGCGGACTCCCACGCGAGAGACCACAGGTCTCGGTGCCCG CTGCACATGGCGGCCTTGTCGGGAAAGTCGGAGTTGGTGTCCTCCCTGCT CACGTGCGGTGCGGACCCCAACAAGGCGTCCGACCTCGGCACGACGGCAC TCCACAACGCGGGCTTTACTCCCTTGCACGTGGCGGCAAGGTGCGGGCGC TTGACTGCCCTGAGGGCCCTCCTGGACGCCGGCGAGGCCGTGGACTCGCC GTCCACCCCCGCGGGCACCACCCCGCTCCACCTCGCGGCCGGGTTCTCGC GGCTGAGCTGCGTGGAGGAGCTCCTCCTGCGCGGCGCCGACCCTTCGAGG AGGAACAAGCGCGGCGCCACGCCGCTGGACATGGGCGGGCCCGAGACGAT GAGCGGCAAGGCCAAGCTCGCCAGGGAGGCGTTCGAGAAGAAGCTGGCGG AAGGGGAGCGGGTGAGGCTCGCCCTGACGAGCGCGCAGAGGTGGCAGAGG AAGCGGGGCATGGTGCTGGTGTGCGAGACTCTCCGCAAGAGGGCTAACGC TGTCCTCGCGCTTGCTGATGGCGCATCCGACGGGGGTGCGTTGGCAGGGA GGGAGCGGCTCGAACGCGACCATGGCGACACCAAGCGCCGCTTTAGGCGT TCCCTAGCTGGCGGGTCGGTCGCATCGGCCGTCCCTTCTCAGGGGTGGCT GGTCGCGCAGCTCTGCGTGCATGCCGACCCCGCGTTGATGAAGGGCGTCA TTGAGTTTTTGTGA back to top
Synonyms
The feature 'Ec-28_000350.1' has the following synonyms
Synonym |
Esi0120_0064 |
Esi_0120_0064 |
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