|
Homology
BLAST of Ec-28_000210.1 vs. uniprot
Match: A0A6H5L9A3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9A3_9PHAE) HSP 1 Score: 809 bits (2090), Expect = 2.170e-276 Identity = 450/577 (77.99%), Postives = 466/577 (80.76%), Query Frame = 2
Query: 62 MKHLANTSRLSLTSLHNAARRGDSTSLQRLIATIDPLAAEKIAAVLRDGDSRGACISSPRT-AAAPKNKVKGKGAGRTTSKLVHAQGKSGGKKKKTPSRLKRLLQKQDSKRRTALYVACASGNTEIADALLTVGASLDGHGAWQRTPXXXXXXXXXXSAMRRLLGAGADPWALNDRGQTPSEVSQMFNANREALGLLEEAAIMRREVSTGTEGLIGTTFVHDDGQVGTVVDAVERWAFTLEVELDGWKMVNGSGAKLYLPVSGERLNTRAPPSSAGAADTTNDDGTTSGSRSNPTSLAEPILWLADTVQRMRLESEGLVRVTADSLVGARVSRKTPLGGGRVTAVRNVKIRCDLRTAASSARVGMTTVPVTGSKRERCANAAFSETRSEEPELSDLGESLGMPMQEAQSCCSCSTASSDHDVGLKVPEVGLAAGLGAVGHHGDRERYQGEDGSKATISCATPRGPENAGHGHRQVGPSGECSTRRCLSARLVQVASKRGVSRRHREQRASSEDSWAKDGDTDDESGAPDDWSVGTESAAEFDACVATPVNERTREGFGSQRAGIESRSTNRREAPSQ 1789
MK L NTSRLSLTSLHNAARR DS SLQRLIATIDPLAA+KI AVL+DGDSRGACISSPRT AAAPKNK ++ + + +K PSRLKRLLQ+QDSKRRT L+VACASGNTEIADALLTVGASLDGHGAWQRTP SAMRRLLGAGADPWALNDRGQTPSEVSQMFNANREALGLLEEAAIMRREVSTGTEGLIGTTFVHDDGQVGTVVDA ERW FTLEV+LDGWKM NGSG KLYLPVS RSNPTS AEPI LADTVQRMRLESE LV VTADSL+GARVSR+TPLGGGRVTAVRNVKIRCDLRTAASS R G+TT TGSKRER ANA SETRSEEP+LSD GESLGMPMQEAQ C S ST SS H VGLKV EVGL AGLGAVGHHGDRER+QGEDG KAT SCATPRGPENA HGHRQV PSGECSTRRCLS RLVQVAS GVSRR EQ SE SWA DGDTDDESGAPDDWSVGTESAAE DACVAT VNERTREGFGSQRAG +SRSTN R APSQ
Sbjct: 1 MKCLENTSRLSLTSLHNAARREDSASLQRLIATIDPLAADKIGAVLQDGDSRGACISSPRTPAAAPKNKEH--------TRCLSTRWPE----EKAPSRLKRLLQQQDSKRRTVLFVACASGNTEIADALLTVGASLDGHGAWQRTPLHIAAFEGHTSAMRRLLGAGADPWALNDRGQTPSEVSQMFNANREALGLLEEAAIMRREVSTGTEGLIGTTFVHDDGQVGTVVDAAERWTFTLEVDLDGWKMGNGSGVKLYLPVS----------------------------RSNPTSFAEPIPRLADTVQRMRLESEDLVNVTADSLIGARVSRRTPLGGGRVTAVRNVKIRCDLRTAASSTRAGLTTATATGSKRERRANATLSETRSEEPDLSDRGESLGMPMQEAQPCRSFSTTSSGHYVGLKVLEVGLTAGLGAVGHHGDRERHQGEDGPKATNSCATPRGPENAVHGHRQVAPSGECSTRRCLSTRLVQVASNHGVSRRQLEQWPPSEGSWANDGDTDDESGAPDDWSVGTESAAELDACVATTVNERTREGFGSQRAGTQSRSTNGRGAPSQ 537
BLAST of Ec-28_000210.1 vs. uniprot
Match: D7FIG7_ECTSI (Ankyrin repeat domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIG7_ECTSI) HSP 1 Score: 701 bits (1810), Expect = 1.240e-236 Identity = 411/576 (71.35%), Postives = 411/576 (71.35%), Query Frame = 2
Query: 62 MKHLANTSRLSLTSLHNAARRGDSTSLQRLIATIDPLAAEKIAAVLRDGDSRGACISSPRTAAAPKNKVKGKGAGRTTSKLVHAQGKSGGKKKKTPSRLKRLLQKQDSKRRTALYVACASGNTEIADALLTVGASLDGHGAWQRTPXXXXXXXXXXSAMRRLLGAGADPWALNDRGQTPSEVSQMFNANREALGLLEEAAIMRREVSTGTEGLIGTTFVHDDGQVGTVVDAVERWAFTLEVELDGWKMVNGSGAKLYLPVSGERLNTRAPPSSAGAADTTNDDGTTSGSRSNPTSLAEPILWLADTVQRMRLESEGLVRVTADSLVGARVSRKTPLGGGRVTAVRNVKIRCDLRTAASSARVGMTTVPVTGSKRERCANAAFSETRSEEPELSDLGESLGMPMQEAQSCCSCSTASSDHDVGLKVPEVGLAAGLGAVGHHGDRERYQGEDGSKATISCATPRGPENAGHGHRQVGPSGECSTRRCLSARLVQVASKRGVSRRHREQRASSEDSWAKDGDTDDESGAPDDWSVGTESAAEFDACVATPVNERTREGFGSQRAGIESRSTNRREAPSQ 1789
MKHLANTSRLSLTSLHNAARRGDSTSLQRLIATIDPLAAEKIAAVLRDGDSRGACISSPRTAAAPKNKVKGKGAGRTTSKLVHAQGKSGGKKKKTPSRLKRLLQKQDSKRRTALYVACASGNTEIADALLTVGASLDGHGAWQRTPXXXXXXXXXXSAMRRLLGAGADPWALNDRGQTPSEVSQMFNANREALGLLEEAAIMRREVSTGTEGLIGTTFVHDDGQVGTVVDAVERWAFTLEVELDGWKMVNGSGAKLYLP VPEVGLAAGLGAVGHHGDRERYQGEDGSKATISCATPRGPENAGHGHRQVGPSGECSTRRCLSARLVQVASKRGVSRRHREQRASSEDSWAKDGDTDDESGAPDDWSVGTESAAEFDACVATPVNERTREGFGSQRAGIESRSTNRREAPSQ
Sbjct: 1 MKHLANTSRLSLTSLHNAARRGDSTSLQRLIATIDPLAAEKIAAVLRDGDSRGACISSPRTAAAPKNKVKGKGAGRTTSKLVHAQGKSGGKKKKTPSRLKRLLQKQDSKRRTALYVACASGNTEIADALLTVGASLDGHGAWQRTPXXXXXXXXXXSAMRRLLGAGADPWALNDRGQTPSEVSQMFNANREALGLLEEAAIMRREVSTGTEGLIGTTFVHDDGQVGTVVDAVERWAFTLEVELDGWKMVNGSGAKLYLP---------------------------------------------------------------------------------------------------------------------------------------------------------------------VPEVGLAAGLGAVGHHGDRERYQGEDGSKATISCATPRGPENAGHGHRQVGPSGECSTRRCLSARLVQVASKRGVSRRHREQRASSEDSWAKDGDTDDESGAPDDWSVGTESAAEFDACVATPVNERTREGFGSQRAGIESRSTNRREAPSQ 411
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 705.7 |
Seed ortholog evalue | 2.9e-200 |
Seed eggNOG ortholog | 2880.D7FIG7 |
Length | 4761 |
Hectar predicted targeting category | mitochondrion |
Gene id | Ec-28_000210.1 |
EggNOG free text desc. | proteasome regulatory particle assembly |
EggNOG OGs | COG0666@1,KOG4412@2759 |
COG Functional cat. | L |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ec-28_000210.1 ID=Ec-28_000210.1|Name=Ec-28_000210.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=928bp MKHLANTSRLSLTSLHNAARRGDSTSLQRLIATIDPLAAEKIAAVLRDGD SRGACISSPRTAAAPKNKVKGKGAGRTTSKLVHAQGKSGGKKKKTPSRLK RLLQKQDSKRRTALYVACASGNTEIADALLTVGASLDGHGAWQRTPLHIA AFEGHTSAMRRLLGAGADPWALNDRGQTPSEVSQMFNANREALGLLEEAA IMRREVSTGTEGLIGTTFVHDDGQVGTVVDAVERWAFTLEVELDGWKMVN GSGAKLYLPVSGERLNTRAPPSSAGAADTTNDDGTTSGSRSNPTSLAEPI LWLADTVQRMRLESEGLVRVTADSLVGARVSRKTPLGGGRVTAVRNVKIR CDLRTAASSARVGMTTVPVTGSKRERCANAAFSETRSEEPELSDLGESLG MPMQEAQSCCSCSTASSDHDVGLKVPEVGLAAGLGAVGHHGDRERYQGED GSKATISCATPRGPENAGHGHRQVGPSGECSTRRCLSARLVQVASKRGVS RRHREQRASSEDSWAKDGDTDDESGAPDDWSVGTESAAEFDACVATPVNE RTREGFGSQRAGIESRSTNRREAPSQDIGLRTHRFSFLDNLVPLAALEGV LDCNHLPPSAVAPQSRARRRQLLSHWNTRMSVSMAAGGGASAAPTSYQRR RAHRHDILQHSSGGYSVSPSPASTHSMLEVDDLSERGARDGEGDDDLLSI VGLEEKIEREERSPERMDGRRIGVEATRKAVREALVLWSGKADILQGRLV VLRTVSASVASTVASSHTQNATRSVSLEELLASPSPRCCACDMRDGYCRR DDYDRQTPIPPASDNIRRGSDISTASNNGTIDTAQKHTSGPVAHACYSCA AKSTNVGSEPHGDLHVDGASSDDYRNTCAGVDDFGGTVKDTSTSREEGLV VDLEECLVHMTHLRDWLRLLDQEIGQL* back to topspliced messenger RNA >Ec-28_000210.1 ID=Ec-28_000210.1|Name=Ec-28_000210.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=4761bp|location=Sequence derived from alignment at chr_28:273732..281422+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.
AGTTCAAGAGCGACTTGTTGCAAACAAAGACGTGTGGTGCTACATAGCTC CTGCTCGTGCACATGAAACATCTCGCAAACACGTCGAGGCTCTCCCTCAC CAGCCTGCACAATGCCGCCAGGCGAGGGGATTCAACTTCCCTGCAACGCC TCATTGCTACCATTGACCCGCTCGCGGCGGAGAAGATTGCTGCGGTTCTA CGAGACGGCGACAGCAGGGGGGCGTGCATCTCGAGTCCTCGCACTGCTGC CGCTCCTAAGAATAAGGTCAAGGGCAAAGGAGCTGGCAGAACCACGTCAA AACTCGTGCACGCGCAAGGAAAGTCAGGTGGCAAGAAGAAAAAAACTCCT AGCCGCTTGAAGCGATTGTTACAAAAACAGGACTCAAAGCGGCGGACGGC ACTCTATGTGGCATGTGCTTCCGGAAACACCGAAATAGCAGACGCTTTGC TGACGGTCGGTGCTAGCCTAGATGGCCACGGTGCCTGGCAAAGGACCCCG CTACACATCGCTGCCTTCGAGGGTCACACTTCGGCAATGCGCCGGCTGCT AGGTGCAGGAGCAGACCCCTGGGCCTTGAACGATCGTGGACAGACCCCAT CGGAAGTGAGCCAAATGTTCAACGCCAACCGCGAGGCCCTGGGGCTGCTT GAGGAGGCGGCCATCATGCGGCGAGAAGTGTCCACAGGAACGGAGGGGCT GATAGGGACGACTTTCGTCCACGATGACGGCCAGGTCGGAACCGTTGTTG ACGCGGTCGAGCGATGGGCGTTCACTCTGGAGGTCGAGTTGGACGGCTGG AAGATGGTGAACGGCTCGGGAGCCAAGCTTTATCTTCCTGTGAGCGGTGA ACGGCTCAACACACGGGCACCGCCATCCTCGGCTGGGGCTGCTGATACAA CGAATGATGACGGCACAACAAGCGGCAGCCGATCAAATCCAACAAGTCTT GCTGAGCCTATCCTGTGGCTGGCGGACACGGTGCAGAGGATGAGACTCGA GAGCGAAGGTCTGGTGAGGGTCACGGCAGACAGTCTCGTCGGAGCTAGGG TGTCGAGGAAGACACCGCTCGGCGGCGGCAGGGTGACCGCGGTGCGAAAC GTAAAAATTCGTTGCGACCTCCGAACCGCCGCTTCGAGCGCGAGAGTCGG AATGACCACGGTCCCGGTGACCGGCAGCAAAAGAGAACGATGTGCCAACG CAGCCTTCAGCGAAACACGCAGCGAAGAACCAGAATTGTCTGACCTGGGG GAGTCGCTTGGAATGCCAATGCAAGAGGCCCAGTCGTGCTGTAGCTGCTC TACCGCCTCGAGCGATCACGATGTTGGTCTAAAGGTGCCGGAGGTGGGTC TTGCTGCAGGGCTCGGGGCCGTTGGGCACCACGGGGATCGGGAAAGGTAC CAAGGCGAAGACGGCTCGAAAGCGACCATTAGCTGTGCCACGCCAAGGGG TCCGGAAAATGCAGGCCATGGACATCGGCAAGTTGGGCCGTCGGGGGAGT GCTCAACACGGCGTTGCCTCTCAGCGAGGCTTGTCCAAGTGGCGAGCAAG CGCGGGGTGTCGAGACGCCACCGGGAACAAAGGGCGTCCTCAGAAGATTC GTGGGCAAAAGATGGCGACACCGACGACGAAAGCGGGGCTCCGGATGATT GGTCGGTCGGAACGGAAAGTGCGGCGGAATTTGACGCATGCGTGGCAACC CCCGTGAACGAACGCACGCGTGAAGGCTTCGGGTCACAACGGGCGGGAAT AGAGAGCCGTAGTACAAACCGCAGGGAAGCTCCGTCCCAAGACATTGGGC TCCGTACCCACCGCTTTTCTTTCCTGGATAACCTCGTGCCTCTGGCTGCG TTGGAAGGCGTTCTTGACTGCAATCACTTACCTCCATCGGCTGTGGCACC CCAATCCCGCGCTCGAAGACGCCAGCTGCTGTCGCACTGGAACACACGAA TGTCGGTATCGATGGCGGCGGGAGGAGGAGCATCAGCAGCACCAACGTCC TACCAGCGACGTCGGGCTCACCGGCACGACATCCTCCAGCATTCGTCCGG AGGGTATTCCGTGTCGCCATCGCCTGCTTCAACCCACTCGATGCTCGAGG TTGACGACTTGTCAGAGCGTGGAGCCCGTGATGGAGAGGGAGACGACGAC TTGCTTAGCATTGTGGGGTTGGAAGAGAAAATCGAACGGGAGGAGCGCAG CCCCGAGCGGATGGACGGCAGGCGGATTGGGGTGGAGGCCACGAGGAAAG CTGTTCGCGAGGCCCTAGTCTTGTGGAGCGGAAAAGCAGACATCCTCCAG GGGAGACTCGTGGTACTCAGAACCGTGTCGGCGTCTGTAGCTTCTACGGT TGCAAGCAGCCATACCCAAAATGCCACCCGCTCTGTGTCCTTGGAAGAGT TGTTGGCCAGCCCATCACCACGGTGCTGCGCGTGTGACATGCGGGATGGT TACTGCCGGCGGGATGACTACGACCGGCAGACGCCGATCCCGCCCGCTTC TGACAATATCCGTCGAGGCAGCGACATCTCCACAGCTTCGAACAACGGCA CGATCGATACGGCACAGAAGCATACCAGCGGGCCTGTCGCACACGCTTGT TACTCCTGTGCCGCCAAAAGTACCAACGTTGGCTCTGAGCCACATGGCGA TCTCCATGTCGATGGTGCAAGCAGCGACGACTATCGAAATACCTGTGCTG GTGTTGACGATTTTGGCGGTACGGTTAAGGACACCTCCACTTCGAGGGAG GAGGGGCTGGTTGTCGACCTAGAAGAGTGCCTGGTTCACATGACGCATCT AAGAGATTGGCTTCGTCTGCTGGACCAAGAAATTGGTCAGTTGTAGGCAA TCCATCCCCTAGTAGGTCCTCCAAGCCAGTGATGAAGTATGTCTACATTG GAAGGACACTTGCGGCCGTTAAAGCTTGCCTGACTATACGGCAGTAAGGA TAGTCGACGTTACGTATGTGTTGGTGATTTCTCCGCAGAGTCGTGGCCGC TTGTTCGTGTCGAACGCAAGACCGCACTCGCTGTCTCTCGCAAGCGGGCA CTGGGCCACAGCGAAGTAAAACACCCGTACTTCCTCGAAGCCCTCGACTG CATCGGTTGCCTCCGTCATCAAGGTAACTTTCTTCGCAGGTGTTGTTGAT GTTGACGGAGCAAGGAAAGAACCCCTTCCATAATGCTAAACAAGAAAACG ATGAATGAAAACTGCAAAGCCTTCCCGTAAAAACACTTCACTTGTATATC CGGCGTTGCGCTTTGTATGAGAAGCTTTTGTTTGCCCAGCACCTATAATA TTGCCAGGTGACTAGACTAGTCTATATCCTTCAATAGCCCAGGTACGAGT GTTTTGGGGGAACTCCTCGAAAATATTGTGGGACGATCTTCACCTTGCGT TGTAGTTCGAGGCAGGATTCTGCGGGTAAGCCTGAACCTAGCCAGGTTGA CCTAGACCGAAGAGTTGACAGTTTCAGGTCGCAGCTTTCTTTTTCCCTAC ATCTAAGCCACTTTCCCTTTTCTCTCTGGGGAGATAACAACCAGTGACTC CGGTTCTTCTTCGTTAATACCGCGGAGGGAGACTGCCAAGGGCTGTATCA TGAGACAATTCATAGATAAGGGCCACGGGGTGGTTCCCAACCCTCTCGTC AAACTGGTTCGAGCCTACCACAAACGGTACATTGATTTACGCCGTTTAGC ACGTGTCGCACTCGCGGATCACTTGGAGGGTGTACACAGTGCATATTGTT GCATCGAAATCGGCTTGACGGTGGTCGTCCAATGCACGATCCTCCCACAT GCCCACGTTGTGTTGAGGGATATGCATGATCATGCATACCGCGTGGCGTA GTGTGATCCAAGACGGGGACCAGGTGTTGCACGGGTTCGTAAAGGTCTGT GCAGCGTCCATCAGGTACCAGCACGTGCATGCGATACCCGAAAAGAAGCT CAAAGGTTGGTCTCATCTGTTGATCATCCCAGGTTGCTTAAAACACCGGC AACACAACGTGAGCCCCCCCCCCCCCCCCCTCTAAACTGCGAACAACTCG ATACACTGCACGACAAAACGATACAAAACCAACAGGCATCAACCAATCCA AGGAAGACGGACTTACCCCAAGCGAGAGAAGAAAGGGCTACTTTTGTCTC TGGGGCGGTTTTGCGCTTTTAAATCGGGACCGCTGCTGCGCCAAGAGAGG GCACCACAAGGTCAAGGGCTTAGCGTCAAGACACCGGATGTTTGTGGCGG CCAGGGAATGGCCGAGAGCCGTCAGCGAGCGGTTGCAGCATGCGTTTGAG AGCATGATACCGTGCAACAACAAGCACACAGGGCGCGAATTCAAGAAAAG CGAAAAACAAAACAAAACAGTGGGTGTGGCACCTGCAAGGCTTTACTCCA GGCAACCGTTTCATGCTCTCTCGACGACGTGGGAAAGAACAGCGCCACTT TTCCCAACAACGTCTCGTGCTTGAGTTGTGCTAAAGGAATCTTACTCTTG CTCAAAGCCTCCCGCAGCCCCCGCACTCAAACGTGCAGGCAAACTTCGAA GCAAAGACGCTCCAGAGAACGGTTTGAGTGACAGACGAATGCGTCAGCCC CTGTCCGAATGACAACGAGACAGCGCCACGTGTTAATTAAACCACCGGTC CCAGAGGAGCACCACGTGACAGCTCCAAGTAGGTCTCGACCCAGCGCCGA GCCCCCGCTTAGGGTACACGATTCGAACACCCCGTCAGATGAGCTTTTTC GATCTGGAGAG back to topprotein sequence of Ec-28_000210.1 >Ec-28_000210.1 ID=Ec-28_000210.1|Name=Ec-28_000210.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=928bp
MKHLANTSRLSLTSLHNAARRGDSTSLQRLIATIDPLAAEKIAAVLRDGD SRGACISSPRTAAAPKNKVKGKGAGRTTSKLVHAQGKSGGKKKKTPSRLK RLLQKQDSKRRTALYVACASGNTEIADALLTVGASLDGHGAWQRTPLHIA AFEGHTSAMRRLLGAGADPWALNDRGQTPSEVSQMFNANREALGLLEEAA IMRREVSTGTEGLIGTTFVHDDGQVGTVVDAVERWAFTLEVELDGWKMVN GSGAKLYLPVSGERLNTRAPPSSAGAADTTNDDGTTSGSRSNPTSLAEPI LWLADTVQRMRLESEGLVRVTADSLVGARVSRKTPLGGGRVTAVRNVKIR CDLRTAASSARVGMTTVPVTGSKRERCANAAFSETRSEEPELSDLGESLG MPMQEAQSCCSCSTASSDHDVGLKVPEVGLAAGLGAVGHHGDRERYQGED GSKATISCATPRGPENAGHGHRQVGPSGECSTRRCLSARLVQVASKRGVS RRHREQRASSEDSWAKDGDTDDESGAPDDWSVGTESAAEFDACVATPVNE RTREGFGSQRAGIESRSTNRREAPSQDIGLRTHRFSFLDNLVPLAALEGV LDCNHLPPSAVAPQSRARRRQLLSHWNTRMSVSMAAGGGASAAPTSYQRR RAHRHDILQHSSGGYSVSPSPASTHSMLEVDDLSERGARDGEGDDDLLSI VGLEEKIEREERSPERMDGRRIGVEATRKAVREALVLWSGKADILQGRLV VLRTVSASVASTVASSHTQNATRSVSLEELLASPSPRCCACDMRDGYCRR DDYDRQTPIPPASDNIRRGSDISTASNNGTIDTAQKHTSGPVAHACYSCA AKSTNVGSEPHGDLHVDGASSDDYRNTCAGVDDFGGTVKDTSTSREEGLV VDLEECLVHMTHLRDWLRLLDQEIGQL* back to topmRNA from alignment at chr_28:273732..281422+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >Ec-28_000210.1 ID=Ec-28_000210.1|Name=Ec-28_000210.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=7691bp|location=Sequence derived from alignment at chr_28:273732..281422+ (Ectocarpus species7 Ec32 male_plus_femaleSDR) AGTTCAAGAGCGACTTGTTGCAAACAAAGACGTGTGGTGCTACATAGCTC
CTGCTCGTGCACATGAAACATCTCGCAAACACGTCGAGGCTCTCCCTCAC
CAGCCTGCACAATGCCGCCAGGCGAGGGGATTCAACTTCCCTGCAACGCC
TCATTGCTACCATTGACCCGCTCGCGGCGGAGAAGATTGCTGCGGTTCTA
CGAGACGGCGACAGCAGGGGGGCGTGCATCTCGAGTCCTCGCACTGCTGC
CGCTCCTAAGAATAAGGTACAAAGGAACATATGTGTGTGCGAGCCGTTGC
CTGCCTGTATGCATCATGTACTTGTCCAGCAAATGTTTTGCCGAACTTTC
TTCGCATCTCCTGCGAGTTCTACAACTTCCAGCAACATTGGCAGGTAACT
CTGAAGCATCCAGCTTTTCCAACGGTCGTGTACGTCCAAGACACATCTTC
ATAGCTGCATAAAGCTTGATAGATTCCCCTGATACCACGACCGACCGCAG
TCAGTGCCAAGACCGTAAAAAGGTCCTACGTACAAGGCGACCTTGCTCGA
CTGGTGATTTGCATCCCGAGTACTCCGTAGTACACTGCTGCATGTTGTGT
TCTTTCGCAAGTAAGTCCGATCTCTGGAATCCTGACAAGGTATGTACAGG
AGAACGCTGCCCAAACAACTTGCAGTCAGCCACAGAGAGAGGTACACAAC
GAGGGGCCAACATGGAAGGAATGAAACACTGCCGTCGATGCACCGGCTGA
GGTTCTTGCCCTGCAGTACAGCACAATCACGCTAGACTACCATGAACCGT
TTGCATTTTGTGTGACTTGCCGCCCGCACTGTGCGCGGCCCTCCTTTATT
GTTGAGCAGGTCAAGGGCAAAGGAGCTGGCAGAACCACGTCAAAACTCGT
GCACGCGCAAGGAAAGTCAGGTGGCAAGAAGAAAAAAACTCCTAGCCGCT
TGAAGCGATTGTTACAAAAACAGGACTCAAAGCGGCGGACGGCACTCTAT
GTGGCATGTGCTTCCGGTGAGCAACAAGTATAAAAACCACGAGTTAAAGG
TATCTTGAGGTTGTACTGGATGCCCCACTGTGTTGCAGAGTCTAAGTGAG
TGAAACCTCACAGCCGATACTCTGGCTGTGTAAAACCTACAACCTATCGT
CACAAATCGTTCTTCATACGACGGCCCTGTGCTACAACAGGGTCCGTTCG
TCATGTAGTATGCCGTTCTTTCCGTCTCGAAGAACACGTCGGCCGTTTGT
GGGCTTTCCTGCCCCCGAGGAGGAATTGAGACTCTCCCGCCAACAATGAG
CACCATCTTACAGCAGTCAAAGCCGACGCTGTTCTAGGTAAACAAAGTAT
TCGACGGATTGCATTCGAAGGACAACAGGCTGTTTTTTTCGTGAGCAACG
AGGAAGGTGTGCTACAATCGACCCCGAAGTACCCGCGTGTTCCAGACCAC
AAAAAAAATGTTCTCGTCAGCAACGCAAGAACCCTGTTACAGTGGTATTG
CGCGTGCTGTTTTTGGCCTATCGCTGCCCTCCGCAGGAAACACCGAAATA
GCAGACGCTTTGCTGACGGTCGGTGCTAGCCTAGATGGCCACGGTGCCTG
GCAAAGGACCCCGCTACACATCGCTGCCTTCGAGGGTCACACTTCGGCAA
TGCGCCGGCTGCTAGGTGCAGGAGCAGACCCCTGGGCCTTGAACGATCGT
GGACAGACCCCATCGGAAGTGAGCCAAATGTTCAACGCCAACCGCGAGGC
CCTGGGGCTGCTTGAGGAGGCGGCCATCATGCGGCGAGAAGTGTCCACAG
GTACGTGTTTAGCCTCTGTACAACTAGAGCAGAACCACCCCCGTGTCGAA
ACATCCAACCCTTCACACCCTTGGGCGGCCTAAGATCAATTCACGAGTGC
ACAATTATAATTTCTCGGCGCCCGCGCGAGGTCAACTCACACACCATATT
CACACCGTATTTTCAGCACGAGGCTAACAATTGTTCGGCACGAGGGGAGT
AGATCGCTGTTGTTGGCGATCCGTTTGGTGTGCGTGCTCACGGCGGTCGG
TCCTGCCGACACCCATCTCGTACGACAGGAACGGAGGGGCTGATAGGGAC
GACTTTCGTCCACGATGACGGCCAGGTCGGAACCGTTGTTGACGCGGTCG
AGCGATGGGCGTTCACTCTGGAGGTCGAGTTGGACGGCTGGAAGATGGTG
AACGGCTCGGGAGCCAAGCTTTATCTTCCTGTGAGGTGCACGACCGCAAA
AAATTGCTTGATTGTGAGCGCGTCACACGCCTTTTGTCGCCGTTTCTGTC
TGCAAGTGCACGCAACCCTGACCTAAACACACACCTCAGCGTTGTCCCCG
CGTGTCTCATTCCACGCGCGATAAATGAGCAGCGGTGAACGGCTCAACAC
ACGGGCACCGCCATCCTCGGCTGGGGCTGCTGATACAACGAATGATGACG
GCACAACAAGCGGCAGCCGATCAAATCCAACAAGTCTTGCTGAGCCTATC
CTGTGGCTGGCGGACACGGTGCAGAGGATGAGACTCGAGAGCGAAGGTCT
GGTGAGGGTCACGGCAGACAGTCTCGTCGGAGCTAGGGTGTCGAGGAAGA
CACCGCTCGGCGGCGGCAGGGTGACCGCGGTGCGAAACGTAAAAATTCGT
TGCGACCTCCGAACCGCCGCTTCGAGCGCGAGAGTCGGAATGACCACGGT
CCCGGTGACCGGCAGCAAAAGAGAACGATGTGCCAACGCAGCCTTCAGCG
AAACACGCAGCGAAGAACCAGAATTGTCTGACCTGGGGGAGTCGCTTGGA
ATGCCAATGCAAGAGGCCCAGTCGTGCTGTAGCTGCTCTACCGCCTCGAG
CGATCACGATGTTGGTCTAAAGGTGCCGGAGGTGGGTCTTGCTGCAGGGC
TCGGGGCCGTTGGGCACCACGGGGATCGGGAAAGGTACCAAGGCGAAGAC
GGCTCGAAAGCGACCATTAGCTGTGCCACGCCAAGGGGTCCGGAAAATGC
AGGCCATGGACATCGGCAAGTTGGGCCGTCGGGGGAGTGCTCAACACGGC
GTTGCCTCTCAGCGAGGCTTGTCCAAGTGGCGAGCAAGCGCGGGGTGTCG
AGACGCCACCGGGAACAAAGGGCGTCCTCAGAAGATTCGTGGGCAAAAGA
TGGCGACACCGACGACGAAAGCGGGGCTCCGGATGATTGGTCGGTCGGAA
CGGAAAGTGCGGCGGAATTTGACGCATGCGTGGCAACCCCCGTGAACGAA
CGCACGCGTGAAGGCTTCGGGTCACAACGGGCGGGAATAGAGAGCCGTAG
TACAAACCGCAGGGAAGCTCCGTCCCAAGGTGCTTATTCAGCGGCACCGA
CTGCTGGGATGCACCTCTAGTTCTGGTTGCCATCCAAGTATTCACAGGAG
TCAACGCTTAGATTCGTTTTCTTCTGGCATTGGGCTGTGCTGGAGAGAGC
GCAATCTCGGTGCATTGGAACGTCCCACCTCGGCCGCTGCTACTTTTATC
AAGCGGTACTGGTGCAACGTAAACCGGAGAGCGTGGCTTGGGCTGTCCGC
GAGAACCTTCACCGAACGTGTTGAATGATTGGGTAGAGACATGACAACAG
TTAGGGCTAGATATTGGTTTCTGTAGGAACGTCGTGCTACAGGTTGGACG
AACTGTGTTCTGCGCGAGACAGGTGTGTCGCCTATTTACCAGTTTTTTCT
TGTTAGAGTTGTAAGTCCATCGCGGTCGCTCGATTCCCCGCCACGAGCCC
CCCTCCTCTAGCTTACTGCGAAACCTTGCCCAAGCTGACACTTGCTCTGA
CCCAACCTCGTGCCCCCCCCCCCCCGCCGTTTTGAGGTCACAGACATTGG
GCTCCGTACCCACCGCTTTTCTTTCCTGGATAACCTCGTGCCTCTGGCTG
CGTTGGAAGGCGTTCTTGACTGCAATCACGTGAGAGAGACTCGCTCCTTC
CATCCGTAGTCGCATCGCACGTAGCATTGAATTGTTTGTTCACGTGCCCA
TCCATAAAACGCTTGGGTATTCTCCGTGCGTGCTGTCCCATTTGTTCTGG
ACGCCAATCGTTCGCACCTTTCGGTAAGTATTTGTGGATGCATCAGCTGG
GGTCACACAGGAGGGATGGCCACACCTGAGTTACTATTTCCTCCATCTTC
CTTCCGCTGCGGTTCTAGCCTTGAGGTTTATGGCGAATGACACAGCCGCT
CCTGCACTCGTTGACTTTGAAGTCGAACGCGTACCCGATTTCCACGTTGT
TTGGGCACTTTGGGAGAATGAGTCCGAATTCGTGTGATTGCGCGGAGATT
CGAACTCAAGTCCCCAACCAGACGGCGAGGTTACCAACTGAACCACTCCG
CCATCCTGTTATGTAACCAAGCTCTGAACACTCAAACTTTCGGCTCAGTA
GCTTCGTTGGTCTCTATTACACGAGCACCGCACCATCCCCCTGACACACA
CTACTTGTGCGCGTACTGACACGGACACTTGGCTCACGCCTCGCCCTCGG
CTAGTTACCTCCATCGGCTGTGGCACCCCAATCCCGCGCTCGAAGACGCC
AGCTGCTGTCGCACTGGAACACACGAATGTCGGTATCGATGGCGGCGGGA
GGAGGAGCATCAGCAGCACCAACGTCCTACCAGCGACGTCGGGCTCACCG
GCACGACATCCTCCAGCATTCGTCCGGAGGGTATTCCGTGTCGCCATCGC
CTGCTTCAACCCACTCGATGCTCGAGGTTGACGACTTGTCAGAGCGTGGA
GCCCGTGATGGAGAGGGAGACGACGACTTGCTTAGCATTGTGGGGTTGGA
AGAGAAAATCGAACGGGAGGAGCGCAGCCCCGAGCGGATGGACGGCAGGC
GGATTGGGGTGGAGGCCACGAGGAAAGCTGTTCGCGAGGCCCTAGTCTTG
TGGAGCGGAAAAGCAGACATCCTCCAGGTAAACCACGCACGGAAAGCAGG
CGTGGGAGCGCGATGACGATCTGATGCCCGAATTTCTGTTCTTGTCGAGT
GGTAAATGGCAGTATGACCTCCAGTAGTACAGACTCTAGTCAAGCAGAGA
TGCGCCTTCATAATTGTTGGCGACCGAACATAGGTTGAAAATAATCCTCG
CATCATGTAGACTAATCGGGTGCTGCCGTCGTTACAACCTGAATTTTCAT
GAAATCCTTCGCGGCGCCATCATATTTCTGCCTCACACACTCTCCCCCGT
TCCGGAACCCGCTGTCTAAAATACGGACAGGGGAGACTCGTGGTACTCAG
AACCGTGTCGGCGTCTGTAGCTTCTACGGTTGCAAGCAGCCATACCCAAA
ATGCCACCCGCTCTGTGTCCTTGGAAGAGTTGTTGGCCAGCCCATCACCA
CGGTGCTGCGCGTGTGACATGCGGGATGGTTACTGCCGGCGGGATGACTA
CGACCGGCAGACGCCGATCCCGCCCGCTTCTGACAATATCCGTCGAGGCA
GCGACATCTCCACAGCTTCGAACAACGGCACGATCGATACGGCACAGAAG
CATACCAGCGGGCCTGTCGCACACGCTTGTTACTCCTGTGCCGCCAAAAG
TACCAACGTTGGCTCTGAGCCACATGGCGATCTCCATGTCGATGGTGCAA
GCAGCGACGACTATCGAAATACCTGTGCTGGTGTTGACGATTTTGGCGGT
ACGGTTAAGGACACCTCCACTTCGAGGGAGGAGGGGCTGGTTGTCGACCT
AGAAGAGTGCCTGGTTCACATGACGCATCTAAGAGATTGGCTTCGTCTGC
TGGACCAAGAAATTGGTCAGTTGTAGGCAATCCATCCCCTAGTAGGTCCT
CCAAGCCAGTGATGAAGTATGTCTACATTGGAAGGACACTTGCGGCCGTT
AAAGCTTGCCTGACTATACGGCAGTAAGGATAGTCGACGTTACGTATGTG
TTGGTGATTTCTCCGCAGAGTCGTGGCCGCTTGTTCGTGTCGAACGCAAG
ACCGCACTCGCTGTCTCTCGCAAGCGGGCACTGGGCCACAGCGAAGTAAA
ACACCCGTACTTCCTCGAAGCCCTCGACTGCATCGGTTGCCTCCGTCATC
AAGGTAACTTTCTTCGCAGGTGTTGTTGATGTTGACGGAGCAAGGAAAGA
ACCCCTTCCATAATGCTAAACAAGAAAACGATGAATGAAAACTGCAAAGC
CTTCCCGTAAAAACACTTCACTTGTATATCCGGCGTTGCGCTTTGTATGA
GAAGCTTTTGTTTGCCCAGCACCTATAATATTGCCAGGTGACTAGACTAG
TCTATATCCTTCAATAGCCCAGGTACGAGTGTTTTGGGGGAACTCCTCGA
AAATATTGTGGGACGATCTTCACCTTGCGTTGTAGTTCGAGGCAGGATTC
TGCGGGTAAGCCTGAACCTAGCCAGGTTGACCTAGACCGAAGAGTTGACA
GTTTCAGGTCGCAGCTTTCTTTTTCCCTACATCTAAGCCACTTTCCCTTT
TCTCTCTGGGGAGATAACAACCAGTGACTCCGGTTCTTCTTCGTTAATAC
CGCGGAGGGAGACTGCCAAGGGCTGTATCATGAGACAATTCATAGATAAG
GGCCACGGGGTGGTTCCCAACCCTCTCGTCAAACTGGTTCGAGCCTACCA
CAAACGGTACATTGATTTACGCCGTTTAGCACGTGTCGCACTCGCGGATC
ACTTGGAGGGTGTACACAGTGCATATTGTTGCATCGAAATCGGCTTGACG
GTGGTCGTCCAATGCACGATCCTCCCACATGCCCACGTTGTGTTGAGGGA
TATGCATGATCATGCATACCGCGTGGCGTAGTGTGATCCAAGACGGGGAC
CAGGTGTTGCACGGGTTCGTAAAGGTCTGTGCAGCGTCCATCAGGTACCA
GCACGTGCATGCGATACCCGAAAAGAAGCTCAAAGGTTGGTCTCATCTGT
TGATCATCCCAGGTTGCTTAAAACACCGGCAACACAACGTGAGCCCCCCC
CCCCCCCCCCTCTAAACTGCGAACAACTCGATACACTGCACGACAAAACG
ATACAAAACCAACAGGCATCAACCAATCCAAGGAAGACGGACTTACCCCA
AGCGAGAGAAGAAAGGGCTACTTTTGTCTCTGGGGCGGTTTTGCGCTTTT
AAATCGGGACCGCTGCTGCGCCAAGAGAGGGCACCACAAGGTCAAGGGCT
TAGCGTCAAGACACCGGATGTTTGTGGCGGCCAGGGAATGGCCGAGAGCC
GTCAGCGAGCGGTTGCAGCATGCGTTTGAGAGCATGATACCGTGCAACAA
CAAGCACACAGGGCGCGAATTCAAGAAAAGCGAAAAACAAAACAAAACAG
TGGGTGTGGCACCTGCAAGGCTTTACTCCAGGCAACCGTTTCATGCTCTC
TCGACGACGTGGGAAAGAACAGCGCCACTTTTCCCAACAACGTCTCGTGC
TTGAGTTGTGCTAAAGGAATCTTACTCTTGCTCAAAGCCTCCCGCAGCCC
CCGCACTCAAACGTGCAGGCAAACTTCGAAGCAAAGACGCTCCAGAGAAC
GGTTTGAGTGACAGACGAATGCGTCAGCCCCTGTCCGAATGACAACGAGA
CAGCGCCACGTGTTAATTAAACCACCGGTCCCAGAGGAGCACCACGTGAC
AGCTCCAAGTAGGTCTCGACCCAGCGCCGAGCCCCCGCTTAGGGTACACG
ATTCGAACACCCCGTCAGATGAGCTTTTTCGATCTGGAGAG back to topCoding sequence (CDS) from alignment at chr_28:273732..281422+ >Ec-28_000210.1 ID=Ec-28_000210.1|Name=Ec-28_000210.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=2784bp|location=Sequence derived from alignment at chr_28:273732..281422+ (Ectocarpus species7 Ec32 male_plus_femaleSDR) ATGAAACATCTCGCAAACACGTCGAGGCTCTCCCTCACCAGCCTGCACAA TGCCGCCAGGCGAGGGGATTCAACTTCCCTGCAACGCCTCATTGCTACCA TTGACCCGCTCGCGGCGGAGAAGATTGCTGCGGTTCTACGAGACGGCGAC AGCAGGGGGGCGTGCATCTCGAGTCCTCGCACTGCTGCCGCTCCTAAGAA TAAGGTCAAGGGCAAAGGAGCTGGCAGAACCACGTCAAAACTCGTGCACG CGCAAGGAAAGTCAGGTGGCAAGAAGAAAAAAACTCCTAGCCGCTTGAAG CGATTGTTACAAAAACAGGACTCAAAGCGGCGGACGGCACTCTATGTGGC ATGTGCTTCCGGAAACACCGAAATAGCAGACGCTTTGCTGACGGTCGGTG CTAGCCTAGATGGCCACGGTGCCTGGCAAAGGACCCCGCTACACATCGCT GCCTTCGAGGGTCACACTTCGGCAATGCGCCGGCTGCTAGGTGCAGGAGC AGACCCCTGGGCCTTGAACGATCGTGGACAGACCCCATCGGAAGTGAGCC AAATGTTCAACGCCAACCGCGAGGCCCTGGGGCTGCTTGAGGAGGCGGCC ATCATGCGGCGAGAAGTGTCCACAGGAACGGAGGGGCTGATAGGGACGAC TTTCGTCCACGATGACGGCCAGGTCGGAACCGTTGTTGACGCGGTCGAGC GATGGGCGTTCACTCTGGAGGTCGAGTTGGACGGCTGGAAGATGGTGAAC GGCTCGGGAGCCAAGCTTTATCTTCCTGTGAGCGGTGAACGGCTCAACAC ACGGGCACCGCCATCCTCGGCTGGGGCTGCTGATACAACGAATGATGACG GCACAACAAGCGGCAGCCGATCAAATCCAACAAGTCTTGCTGAGCCTATC CTGTGGCTGGCGGACACGGTGCAGAGGATGAGACTCGAGAGCGAAGGTCT GGTGAGGGTCACGGCAGACAGTCTCGTCGGAGCTAGGGTGTCGAGGAAGA CACCGCTCGGCGGCGGCAGGGTGACCGCGGTGCGAAACGTAAAAATTCGT TGCGACCTCCGAACCGCCGCTTCGAGCGCGAGAGTCGGAATGACCACGGT CCCGGTGACCGGCAGCAAAAGAGAACGATGTGCCAACGCAGCCTTCAGCG AAACACGCAGCGAAGAACCAGAATTGTCTGACCTGGGGGAGTCGCTTGGA ATGCCAATGCAAGAGGCCCAGTCGTGCTGTAGCTGCTCTACCGCCTCGAG CGATCACGATGTTGGTCTAAAGGTGCCGGAGGTGGGTCTTGCTGCAGGGC TCGGGGCCGTTGGGCACCACGGGGATCGGGAAAGGTACCAAGGCGAAGAC GGCTCGAAAGCGACCATTAGCTGTGCCACGCCAAGGGGTCCGGAAAATGC AGGCCATGGACATCGGCAAGTTGGGCCGTCGGGGGAGTGCTCAACACGGC GTTGCCTCTCAGCGAGGCTTGTCCAAGTGGCGAGCAAGCGCGGGGTGTCG AGACGCCACCGGGAACAAAGGGCGTCCTCAGAAGATTCGTGGGCAAAAGA TGGCGACACCGACGACGAAAGCGGGGCTCCGGATGATTGGTCGGTCGGAA CGGAAAGTGCGGCGGAATTTGACGCATGCGTGGCAACCCCCGTGAACGAA CGCACGCGTGAAGGCTTCGGGTCACAACGGGCGGGAATAGAGAGCCGTAG TACAAACCGCAGGGAAGCTCCGTCCCAAGACATTGGGCTCCGTACCCACC GCTTTTCTTTCCTGGATAACCTCGTGCCTCTGGCTGCGTTGGAAGGCGTT CTTGACTGCAATCACTTACCTCCATCGGCTGTGGCACCCCAATCCCGCGC TCGAAGACGCCAGCTGCTGTCGCACTGGAACACACGAATGTCGGTATCGA TGGCGGCGGGAGGAGGAGCATCAGCAGCACCAACGTCCTACCAGCGACGT CGGGCTCACCGGCACGACATCCTCCAGCATTCGTCCGGAGGGTATTCCGT GTCGCCATCGCCTGCTTCAACCCACTCGATGCTCGAGGTTGACGACTTGT CAGAGCGTGGAGCCCGTGATGGAGAGGGAGACGACGACTTGCTTAGCATT GTGGGGTTGGAAGAGAAAATCGAACGGGAGGAGCGCAGCCCCGAGCGGAT GGACGGCAGGCGGATTGGGGTGGAGGCCACGAGGAAAGCTGTTCGCGAGG CCCTAGTCTTGTGGAGCGGAAAAGCAGACATCCTCCAGGGGAGACTCGTG GTACTCAGAACCGTGTCGGCGTCTGTAGCTTCTACGGTTGCAAGCAGCCA TACCCAAAATGCCACCCGCTCTGTGTCCTTGGAAGAGTTGTTGGCCAGCC CATCACCACGGTGCTGCGCGTGTGACATGCGGGATGGTTACTGCCGGCGG GATGACTACGACCGGCAGACGCCGATCCCGCCCGCTTCTGACAATATCCG TCGAGGCAGCGACATCTCCACAGCTTCGAACAACGGCACGATCGATACGG CACAGAAGCATACCAGCGGGCCTGTCGCACACGCTTGTTACTCCTGTGCC GCCAAAAGTACCAACGTTGGCTCTGAGCCACATGGCGATCTCCATGTCGA TGGTGCAAGCAGCGACGACTATCGAAATACCTGTGCTGGTGTTGACGATT TTGGCGGTACGGTTAAGGACACCTCCACTTCGAGGGAGGAGGGGCTGGTT GTCGACCTAGAAGAGTGCCTGGTTCACATGACGCATCTAAGAGATTGGCT TCGTCTGCTGGACCAAGAAATTGGTCAGTTGTAG back to top
Synonyms
The feature 'Ec-28_000210.1' has the following synonyms
Synonym |
Esi0120_0043 |
Esi_0120_0043 |
|