Ec-27_006960.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-27_006960.1
Unique NameEc-27_006960.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length324
Homology
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BLAST of Ec-27_006960.1 vs. uniprot
Match: D7FY35_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY35_ECTSI)

HSP 1 Score: 538 bits (1386), Expect = 5.370e-192
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 1 
Query:  145 SRALGGGASGAAAAVVQVLSLMWLRTTMNYQYKNGGSTKEALQTLWEEGGLSRLYRGVSFALVQGPLSRFGDTAANVGVLALLEAFESTRSLPLPVKSAAGSLAAGLWRIGLTPIDAYKTTLQVSGAEGTKLLAEKVAANGPTVLFEGALATASATFVGHYPWYFTYNSLGAWLPPAPSGEPLLKLGRQALLGLCSSCVSDCCSNSIRVIKTTKQTAPIPLSYPEALKQVLDDDGVPGLFLRGLQTRILVNALQGALFAVAWKYFQELLASGGGA 969
            SRALGGGASGAAAAVVQVLSLMWLRTTMNYQYKNGGSTKEALQTLWEEGGLSRLYRGVSFALVQGPLSRFGDTAANVGVLALLEAFESTRSLPLPVKSAAGSLAAGLWRIGLTPIDAYKTTLQVSGAEGTKLLAEKVAANGPTVLFEGALATASATFVGHYPWYFTYNSLGAWLPPAPSGEPLLKLGRQALLGLCSSCVSDCCSNSIRVIKTTKQTAPIPLSYPEALKQVLDDDGVPGLFLRGLQTRILVNALQGALFAVAWKYFQELLASGGGA
Sbjct:   21 SRALGGGASGAAAAVVQVLSLMWLRTTMNYQYKNGGSTKEALQTLWEEGGLSRLYRGVSFALVQGPLSRFGDTAANVGVLALLEAFESTRSLPLPVKSAAGSLAAGLWRIGLTPIDAYKTTLQVSGAEGTKLLAEKVAANGPTVLFEGALATASATFVGHYPWYFTYNSLGAWLPPAPSGEPLLKLGRQALLGLCSSCVSDCCSNSIRVIKTTKQTAPIPLSYPEALKQVLDDDGVPGLFLRGLQTRILVNALQGALFAVAWKYFQELLASGGGA 295
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BLAST of Ec-27_006960.1 vs. uniprot
Match: A0A835Z3L6_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3L6_9STRA)

HSP 1 Score: 388 bits (996), Expect = 1.790e-132
Identity = 191/282 (67.73%), Postives = 235/282 (83.33%), Query Frame = 1 
Query:  115 DVGAIFAKAGSRALGGGASGAAAAVVQVLSLMWLRTTMNYQYKNGGSTKEALQTLWEEGGLSRLYRGVSFALVQGPLSRFGDTAANVGVLALLEAFESTRSLPLPVKSAAGSLAAGLWRIGLTPIDAYKTTLQVSGAEGTKLLAEKVAANGPTVLFEGALATASATFVGHYPWYFTYNSLGAWLPPAPSGEPLLKLGRQALLGLCSSCVSDCCSNSIRVIKTTKQTAPIPLSYPEALKQVLDDDGVPGLFLRGLQTRILVNALQGALFAVAWKYFQELLASG 960
            D+  I +K+  RALGGGASGAAAA VQVLSLMWLRTTMNYQY+NGGST +AL TL+ EGG+ RLYRG+ FAL+QGPLSRFGDTAAN GV+ALL+A  +T++LPLP+KSA GS+AAGLWRI LTPID  KTTLQV G  G +++ +++ A GP+ LF+GA+AT+ AT VGHYPWY TYN+LG WLP AP+G+ LL+LGR AL+G+C+S VSDCCSNSIRVIKT KQT+P  ++Y +ALK VLD+ GVPGLF RGLQTR++ N LQGALF+V WK+F+   A+G
Sbjct:   14 DIKKILSKSAKRALGGGASGAAAAGVQVLSLMWLRTTMNYQYRNGGSTVDALTTLYAEGGVPRLYRGLPFALLQGPLSRFGDTAANAGVIALLDALPATQALPLPLKSAGGSIAAGLWRIALTPIDTIKTTLQVVGEGGGEVVLKRLQAEGPSALFQGAVATSVATMVGHYPWYLTYNALGEWLPMAPAGDELLRLGRAALMGVCASSVSDCCSNSIRVIKTAKQTSPEQITYTQALKSVLDEGGVPGLFGRGLQTRLVANGLQGALFSVLWKFFETKFAAG 295
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BLAST of Ec-27_006960.1 vs. uniprot
Match: A0A1Z5K5F6_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K5F6_FISSO)

HSP 1 Score: 338 bits (867), Expect = 1.830e-112
Identity = 174/288 (60.42%), Postives = 215/288 (74.65%), Query Frame = 1 
Query:  115 DVGAIFAKAGSRALGGGASGAAAAVVQVLSLMWLRTTMNYQYKNGGSTKEALQTLWEEGGLSRLYRGVSFALVQGPLSRFGDTAANVGVLALLEAFESTRSLPLPVKSAAGSLAAGLWRIGLTPIDAYKTTLQVSGAEGTKLLAEKVAANGPTVLFEGALATASATFVGHYPWYFTYNSLGAWLPPAPSGEPLL-KLGRQALLGLCSSCVSDCCSNSIRVIKTTKQTAPI---------PLSYPEALKQVLDDDGVPGLFLRGLQTRILVNALQGALFAVAWKYFQEL 948
            D  AI AKAG +ALGGG +GA+A+VVQVLSLMWLRTTMNYQY+ GGS   AL TLW EGG+ R Y+G+ FALVQGPL+RFGDTAANVG++ALLE+   T+ LPLPVK+A GS+ AGLWRI L P+DA KT+LQV GA+G K L E V  +GP  L+ GALA A+AT  GH+PW+ T+N L   LP   S + LL  L R A +G+ +SCVSDC SNS+RVIKTTKQTA +          LSYPE ++ +++ DG+  LF RGLQTR+L NA+QGA F+V WKYFQ++
Sbjct:   46 DWSAILAKAGKKALGGGTAGASASVVQVLSLMWLRTTMNYQYRYGGSLPNALSTLWSEGGIPRFYQGLPFALVQGPLTRFGDTAANVGIIALLESLPQTKELPLPVKTACGSITAGLWRIFLMPVDASKTSLQVEGADGLKRLWESVRESGPAPLYRGALAQAAATTAGHFPWFLTFNFLNEQLPAVSSSDDLLLSLARSAFVGMSASCVSDCVSNSLRVIKTTKQTAQLGNDTTIKQKELSYPEVVQIIIEKDGIIALFGRGLQTRLLTNAIQGAAFSVLWKYFQQV 333
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BLAST of Ec-27_006960.1 vs. uniprot
Match: B5Y3N0_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y3N0_PHATC)

HSP 1 Score: 332 bits (851), Expect = 2.960e-109
Identity = 169/283 (59.72%), Postives = 213/283 (75.27%), Query Frame = 1 
Query:  127 IFAKAGSRALGGGASGAAAAVVQVLSLMWLRTTMNYQYKNGGSTKEALQTLWEEGGLSRLYRGVSFALVQGPLSRFGDTAANVGVLALLEAFESTRSLPLPVKSAAGSLAAGLWRIGLTPIDAYKTTLQVSGAEGTKLLAEKVAANGPTVLFEGALATASATFVGHYPWYFTYNSLGAWLPPAPS-GEPLLKLGRQALLGLCSSCVSDCCSNSIRVIKTTKQTAPI--------PLSYPEALKQVLDDDGVPGLFLRGLQTRILVNALQGALFAVAWKYFQEL 948
            IF KA  +ALGGG +GAAAAVVQV SLMWLRT+MNYQY+ GG+ + +L TLW EGG+ RLY+G+ FALVQGPL+RFGDTAANVG+L LLE   +T+ LPLP+K+A GS+AAGLWRI L P+DA KT +QV G+ G K L + V  +GP+ L+ GALA A+AT  GH+PW+ TYN L   LP   S  + LL L R ALLGL +SCVSDC SNS+RV+KTTKQTA +         ++YPE +  +L+ DGV GLF RGLQTR+L N +QGA+F+V W+YFQ++
Sbjct:  106 IFQKASKKALGGGKAGAAAAVVQVCSLMWLRTSMNYQYRYGGNLQSSLNTLWAEGGIGRLYQGLPFALVQGPLTRFGDTAANVGILVLLETLPATQDLPLPLKTACGSVAAGLWRIVLMPVDASKTVMQVEGSGGLKRLWDSVLESGPSPLYRGALAQAAATAAGHFPWFLTYNYLNDQLPAVSSEADLLLSLARSALLGLSASCVSDCVSNSLRVVKTTKQTAQVGEGSDSKKEITYPEVVAMILEQDGVVGLFGRGLQTRLLTNMIQGAVFSVLWRYFQQV 388
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BLAST of Ec-27_006960.1 vs. uniprot
Match: A0A7S0DFV9_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DFV9_9EUKA)

HSP 1 Score: 323 bits (829), Expect = 3.490e-107
Identity = 167/292 (57.19%), Postives = 212/292 (72.60%), Query Frame = 1 
Query:  115 DVGAIFAKAGSRALGGGASGAAAAVVQVLSLMWLRTTMNYQYKNGGSTKEALQTLWEEGGLSRLYRGVSFALVQGPLSRFGDTAANVGVLALLEAFESTRSLPLPVKSAAGSLAAGLWRIGLTPIDAYKTTLQVSGAEGTKLLAEKVAANGPTVLFEGALATASATFVGHYPWYFTYNSLGAWLPPA-----------PSGEPLLKLGRQALLGLCSSCVSDCCSNSIRVIKTTKQTAPIPLSYPEALKQVLDDDGVPGLFLRGLQTRILVNALQGALFAVAWKYFQELLAS 957
            D  +I  KA  RALGGG SGA A V QVLSLMWLRT MN+QY+ G ST EA++TL+E+GG++RLY+G+ FALVQ P+SRFGDTAAN GVL+ LEA   T +LPLPVK A  SLAA  WRIG+TPID +KTTLQV G+   + L EK++  GP VL+ GA A A+ATFVG+YPW+ TYN +   LP A           PS   L +L R+A +G+ +S VSD  SNS+RVIKT KQT+ +P+SY +  K ++D DG+ G+  RGL TR+LVN LQGALF+V WKYF+++LA+
Sbjct:    9 DYQSILRKASKRALGGGTSGALAGVAQVLSLMWLRTAMNFQYRYGTSTLEAIKTLYEQGGITRLYQGLGFALVQNPISRFGDTAANAGVLSFLEAIPETSTLPLPVKQAVASLAASSWRIGITPIDTFKTTLQVEGSTAVEQLKEKISLGGPGVLWNGAFAAAAATFVGNYPWFLTYNYVDKALPSALAIAEAVGHHDPSNVVLYELFRRASIGIAASTVSDTLSNSLRVIKTAKQTSKVPISYVDVTKDIIDKDGLKGILGRGLGTRLLVNCLQGALFSVVWKYFEKILAT 300
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BLAST of Ec-27_006960.1 vs. uniprot
Match: A0A0G4GYY9_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GYY9_VITBC)

HSP 1 Score: 325 bits (832), Expect = 4.350e-107
Identity = 164/277 (59.21%), Postives = 208/277 (75.09%), Query Frame = 1 
Query:  115 DVGAIFAKAGSRALGGGASGAAAAVVQVLSLMWLRTTMNYQYKNGGSTKEALQTLWEEGGLSRLYRGVSFALVQGPLSRFGDTAANVGVLALLEAFESTRSLPLPVKSAAGSLAAGLWRIGLTPIDAYKTTLQVSGAEGTKLLAEKVAANGPTVLFEGALATASATFVGHYPWYFTYNSLGAWLPPAPSGEPLLKLGRQALLGLCSSCVSDCCSNSIRVIKTTKQTAPIPLSYPEALKQVLDDDGVPGLFLRGLQTRILVNALQGALFAVAWKYFQE 945
            DV  I  K+  RA+GGG SG+AA+V+QV SLMWLRT+MNYQY  G      L TLW EGG+ R YRG+ FALVQ PLS+FGDTAAN GVLALL++FEST  LPL VK+A+ S+AAGLWRI + P+D +KTT+QV GA G   +++KV   GPTVL+ GA+A ++ATFVGHYPW+FTYN L   LPP   G+ L+KL R A +GLC+S ++D  SNS+RVIKTTKQT+    SY E +  +++ DGV GLF RGL TR+L N +QG LFAVA+++F+E
Sbjct:   59 DVKTILQKSAKRAVGGGLSGSAASVLQVFSLMWLRTSMNYQYTTGLPLNTTLATLWSEGGVPRFYRGLPFALVQAPLSKFGDTAANAGVLALLDSFESTMGLPLFVKTASASVAAGLWRIVIFPVDTFKTTMQVRGAAGIPQVSDKVKETGPTVLYNGAIAASAATFVGHYPWFFTYNYLQEHLPPVEPGDTLMKLMRNAFIGLCASSLADSLSNSLRVIKTTKQTSEDSPSYREVVSGIIEKDGVRGLFGRGLATRLLTNGVQGMLFAVAYRFFEE 335
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BLAST of Ec-27_006960.1 vs. uniprot
Match: A0A7S2WCX6_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WCX6_9STRA)

HSP 1 Score: 325 bits (832), Expect = 4.500e-107
Identity = 165/273 (60.44%), Postives = 200/273 (73.26%), Query Frame = 1 
Query:  127 IFAKAGSRALGGGASGAAAAVVQVLSLMWLRTTMNYQYKNGGSTKEALQTLWEEGGLSRLYRGVSFALVQGPLSRFGDTAANVGVLALLEAFESTRSLPLPVKSAAGSLAAGLWRIGLTPIDAYKTTLQVSGAEGTKLLAEKVAANGPTVLFEGALATASATFVGHYPWYFTYNSLGAWLPPAPSGEPLLKLGRQALLGLCSSCVSDCCSNSIRVIKTTKQTAPIPLSYPEALKQVLDDDGVPGLFLRGLQTRILVNALQGALFAVAWKYFQE 945
            I  KAG RALGGG  GA A  +QV SLMWLRTTMNYQY+ G STK ALQTL++EGG+ R YRGV  AL+QGP+SRFGDTAAN G+L+LL + ESTR LP+  K+A  S AAGLWR+ L P+D  KT LQV G +G  +L  K+ + GP V++ GA+  A AT VGHYPW+FT+N+L   +P     E   KL R AL+G CSS VSDC SNSIRVIKTTKQT+   +SYP+A+K V++ DGV GLF+RGLQTRI+ N  QG LF V WKY +E
Sbjct:   62 ILEKAGKRALGGGLPGAMAMGIQVGSLMWLRTTMNYQYRYGTSTKVALQTLYKEGGIRRFYRGVGPALIQGPMSRFGDTAANAGMLSLLNSQESTRDLPVAAKTACASFAAGLWRVFLMPVDTLKTVLQVEGTKGPGVLKNKIKSGGPFVMYHGAVGAAGATMVGHYPWFFTFNTLQEKIPMPGEDEVGKKLARNALIGFCSSFVSDCTSNSIRVIKTTKQTSRETISYPQAVKLVIEKDGVSGLFIRGLQTRIIANGFQGMLFTVLWKYMEE 334
[Close]
BLAST of Ec-27_006960.1 vs. uniprot
Match: A0A7S3ZH28_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZH28_9EUKA)

HSP 1 Score: 325 bits (834), Expect = 4.600e-107
Identity = 169/279 (60.57%), Postives = 201/279 (72.04%), Query Frame = 1 
Query:  115 DVGAIFAKAGSRALGGGASGAAAAVVQVLSLMWLRTTMNYQYKNGGSTKEALQTLWEEGGLSRLYRGVSFALVQGPLSRFGDTAANVGVLALLEAFESTRSLPLPVKSAAGSLAAGLWRIGLTPIDAYKTTLQVSGAEGTKLLAEKVAANGPTVLFEGALATASATFVGHYPWYFTYNSLGAWLPPAPSGEPLLKLGRQALLGLCSSCVSDCCSNSIRVIKTTKQTAPIPLSYPEALKQVLDDDGVPGLFLRGLQTRILVNALQGALFAVAWKYFQELL 951
            D G I  KA  RA+GGG SGA A V QVLSLMWLRTTMNYQY+ G  T  AL  L+ +GG+ RLY+G+SFALVQ PLSRFGDTAAN GVLA+LEA   TR LPLP+K    SLAA  WRI +TP+D  KTTLQV G E    L  KV+  GP VL+ GA A A+ATFVG+YPW+ TYN +   LP    G+    L R+A LG+ +S VSD  SNS+RVIKT KQT+ +P+SY EA K++++ DG  GL  RGLQTR+LVN LQGALFAVAWKYF++ L
Sbjct:   82 DYGEILRKASKRAIGGGTSGALAGVAQVLSLMWLRTTMNYQYRYGTDTLTALGALYSQGGIPRLYQGLSFALVQNPLSRFGDTAANAGVLAILEALPETRELPLPLKQGMASLAASSWRIAITPVDTLKTTLQVDGKEALSQLKNKVSLGGPGVLWNGAFAAAAATFVGNYPWFLTYNYVDGILPHPEEGDVATMLARRAALGIAASAVSDTISNSLRVIKTAKQTSKVPISYVEAAKEIVEADGPLGLLGRGLQTRLLVNCLQGALFAVAWKYFEKKL 360
[Close]
BLAST of Ec-27_006960.1 vs. uniprot
Match: A0A0L0FNE2_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FNE2_9EUKA)

HSP 1 Score: 318 bits (815), Expect = 4.180e-105
Identity = 160/273 (58.61%), Postives = 199/273 (72.89%), Query Frame = 1 
Query:  127 IFAKAGSRALGGGASGAAAAVVQVLSLMWLRTTMNYQYKNGGSTKEALQTLWEEGGLSRLYRGVSFALVQGPLSRFGDTAANVGVLALLEAFESTRSLPLPVKSAAGSLAAGLWRIGLTPIDAYKTTLQVSGAEGTKLLAEKVAANGPTVLFEGALATASATFVGHYPWYFTYNSLGAWLPPAPSGEPLLKLGRQALLGLCSSCVSDCCSNSIRVIKTTKQTAPIPLSYPEALKQVLDDDGVPGLFLRGLQTRILVNALQGALFAVAWKYFQE 945
            I   AG RA+GGG  GA A  + V SLMWLRTTMNYQY+ G ST EA + L++EGG+ R YRG   AL QGPLSRFGDTAAN GVLALL+++++T +LP+ VK+   S AA  WR+ L P+D  KTT+QV GA+G   L  K+++ GP VL+ GA+A + ATFVGHYPW+F YN L   LP A   E L KLGR A++G C+S VSD CSNSIRV+KTTKQTA + +SYPE +K V+  DG+ GLF RGL+TRIL NA+QG LF+V WK  +E
Sbjct:   21 ILTAAGKRAIGGGVPGAVAMGINVTSLMWLRTTMNYQYRYGTSTTEAFKHLYKEGGIRRFYRGYGPALFQGPLSRFGDTAANAGVLALLDSYDTTSNLPVGVKTIFASAAAATWRVFLMPVDTLKTTMQVEGAKGVSQLRGKLSSGGPKVLYSGAIAASGATFVGHYPWFFVYNLLQEKLPKAEKDETLKKLGRNAVIGFCASVVSDTCSNSIRVVKTTKQTAAVQMSYPETVKMVIKQDGLIGLFGRGLKTRILANAMQGMLFSVLWKALEE 293
[Close]
BLAST of Ec-27_006960.1 vs. uniprot
Match: A0A2R5GDU3_9STRA (Solute carrier family 25 member 38-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GDU3_9STRA)

HSP 1 Score: 317 bits (813), Expect = 4.260e-104
Identity = 162/281 (57.65%), Postives = 209/281 (74.38%), Query Frame = 1 
Query:  118 VGAIFAKAGSRALGGGASGAAAAVVQVLSLMWLRTTMNYQYKNGGSTKEALQTLWEEGGLSRLYRGVSFALVQGPLSRFGDTAANVGVLALLEAFESTRSLPLPVKSAAGSLAAGLWRIGLTPIDAYKTTLQVSGAEGTKLLAEKVAANGPTVLFEGALATASATFVGHYPWYFTYNSLGAWLPPAPSGEP---LLKLGRQALLGLCSSCVSDCCSNSIRVIKTTKQTAPIPLSYPEALKQVLDDDGVPGLFLRGLQTRILVNALQGALFAVAWKYFQELL 951
            +G I  +AG RA+GGG  GA A  VQVLSLMWLRTT+NYQY+NGG+ +EA  TL++EGG+ R YRGV   L QGPLSRFGDTA+N G+LALL++ E+T +LP+ VK+AA S +A  +RI L PIDA KT+LQV+G +G ++L+ K+   GP VL+ GAL +ASATFVGHYPW+FTYN+L   +P     +P   L KL R A++G  +S VSD  SNSIRV+K TKQT+  P++YPEA +QV+  DG+ G+F RGLQT+IL N LQG LF V WK F++ L
Sbjct:   63 LGEILERAGKRAIGGGLPGAMAMGVQVLSLMWLRTTVNYQYRNGGTMREAFSTLYKEGGIRRFYRGVGPGLFQGPLSRFGDTASNAGMLALLDSSETTATLPVAVKTAAASFSAATFRIFLMPIDAAKTSLQVNGKDGLRILSSKMKVGGPQVLWAGALGSASATFVGHYPWFFTYNTLNEMIPMPAEDDPNHTLKKLSRNAVIGFSASAVSDTVSNSIRVLKVTKQTSAEPITYPEAFRQVVAKDGLSGVFFRGLQTKILANGLQGMLFTVLWKQFEQTL 343
The following BLAST results are available for this feature:
BLAST of Ec-27_006960.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FY35_ECTSI5.370e-192100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z3L6_9STRA1.790e-13267.73Mitochondrial carrier domain-containing protein n=... [more]
A0A1Z5K5F6_FISSO1.830e-11260.42Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
B5Y3N0_PHATC2.960e-10959.72Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S0DFV9_9EUKA3.490e-10757.19Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A0G4GYY9_VITBC4.350e-10759.21Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A7S2WCX6_9STRA4.500e-10760.44Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A7S3ZH28_9EUKA4.600e-10760.57Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A0L0FNE2_9EUKA4.180e-10558.61Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
A0A2R5GDU3_9STRA4.260e-10457.65Solute carrier family 25 member 38-like n=1 Tax=Ho... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:6361580..6365582 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score543.1
Seed ortholog evalue8.7e-152
Seed eggNOG ortholog2880.D7FY35
Length972
Hectar predicted targeting categorysignal peptide
Gene idEc-27_006960.1
EggNOG free text desc.Mitochondrial carrier protein
EggNOG OGs28MPG@1,2QU7F@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_006960Ec-27_006960Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_27 6361580..6365582 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006960.1Ec-27_006960.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_27 6361580..6365582 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006960.1.1Ec-27_006960.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6361580..6361721 +
Ec-27_006960.1.2Ec-27_006960.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6362236..6362330 +
Ec-27_006960.1.3Ec-27_006960.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6362836..6362948 +
Ec-27_006960.1.4Ec-27_006960.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6363295..6363457 +
Ec-27_006960.1.5Ec-27_006960.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6363738..6363856 +
Ec-27_006960.1.6Ec-27_006960.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6364500..6364588 +
Ec-27_006960.1.7Ec-27_006960.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6364954..6365036 +
Ec-27_006960.1.8Ec-27_006960.1.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6365415..6365582 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006960.1CDS:Ec-27_006960.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_27 6361580..6361721 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-27_006960.1 ID=Ec-27_006960.1|Name=Ec-27_006960.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=324bp
MAAFSYLALGPLDVASAATTAPGSVELVAQATTAAASVDVGAIFAKAGSR
ALGGGASGAAAAVVQVLSLMWLRTTMNYQYKNGGSTKEALQTLWEEGGLS
RLYRGVSFALVQGPLSRFGDTAANVGVLALLEAFESTRSLPLPVKSAAGS
LAAGLWRIGLTPIDAYKTTLQVSGAEGTKLLAEKVAANGPTVLFEGALAT
ASATFVGHYPWYFTYNSLGAWLPPAPSGEPLLKLGRQALLGLCSSCVSDC
CSNSIRVIKTTKQTAPIPLSYPEALKQVLDDDGVPGLFLRGLQTRILVNA
LQGALFAVAWKYFQELLASGGGA*
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spliced messenger RNA

>Ec-27_006960.1 ID=Ec-27_006960.1|Name=Ec-27_006960.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=972bp|location=Sequence derived from alignment at chr_27:6361580..6365582+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGGCGTTCAGCTACTTAGCGTTAGGCCCTCTTGATGTCGCCTCTGC
CGCGACTACGGCTCCGGGTAGTGTTGAGTTGGTCGCACAAGCAACCACGG
CGGCCGCCTCTGTGGATGTTGGGGCAATCTTCGCAAAGGCTGGGAGCCGG
GCGTTAGGTGGGGGTGCTAGCGGTGCGGCGGCGGCGGTGGTGCAGGTGCT
GTCTCTCATGTGGCTTCGGACCACGATGAACTATCAGTACAAGAACGGGG
GCTCTACCAAGGAAGCCCTCCAGACGCTATGGGAAGAAGGGGGACTTTCG
AGGCTGTACCGAGGAGTGTCTTTCGCGCTGGTGCAAGGCCCTCTTAGCAG
GTTTGGGGATACGGCCGCAAACGTGGGAGTCCTGGCCTTGCTGGAGGCAT
TTGAGTCCACTCGATCGTTGCCACTGCCGGTCAAGTCGGCGGCGGGGAGC
CTCGCTGCGGGATTGTGGCGCATCGGCCTCACGCCAATAGACGCCTACAA
GACCACTTTGCAGGTTTCCGGGGCTGAGGGAACCAAGCTCCTGGCGGAGA
AAGTGGCGGCGAACGGACCTACCGTCCTCTTCGAGGGTGCCTTAGCGACC
GCCTCGGCTACATTTGTCGGACACTATCCCTGGTACTTCACGTACAATTC
GTTGGGAGCGTGGCTGCCCCCGGCTCCATCAGGGGAACCGCTGCTCAAGC
TTGGGAGACAGGCCCTTCTCGGGCTGTGTTCTTCTTGCGTGTCGGACTGC
TGCAGCAACTCCATCCGCGTGATCAAGACGACCAAGCAGACCGCGCCGAT
ACCGCTATCCTACCCGGAAGCTTTGAAGCAGGTCTTGGACGACGACGGTG
TGCCGGGTCTCTTCTTGCGAGGTCTCCAGACGAGAATCCTCGTCAACGCT
CTCCAAGGGGCCTTGTTCGCGGTTGCGTGGAAGTATTTCCAGGAGCTGTT
GGCAAGCGGCGGGGGCGCTTGA
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protein sequence of Ec-27_006960.1

>Ec-27_006960.1 ID=Ec-27_006960.1|Name=Ec-27_006960.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=324bp
MAAFSYLALGPLDVASAATTAPGSVELVAQATTAAASVDVGAIFAKAGSR
ALGGGASGAAAAVVQVLSLMWLRTTMNYQYKNGGSTKEALQTLWEEGGLS
RLYRGVSFALVQGPLSRFGDTAANVGVLALLEAFESTRSLPLPVKSAAGS
LAAGLWRIGLTPIDAYKTTLQVSGAEGTKLLAEKVAANGPTVLFEGALAT
ASATFVGHYPWYFTYNSLGAWLPPAPSGEPLLKLGRQALLGLCSSCVSDC
CSNSIRVIKTTKQTAPIPLSYPEALKQVLDDDGVPGLFLRGLQTRILVNA
LQGALFAVAWKYFQELLASGGGA*
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mRNA from alignment at chr_27:6361580..6365582+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-27_006960.1 ID=Ec-27_006960.1|Name=Ec-27_006960.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=4003bp|location=Sequence derived from alignment at chr_27:6361580..6365582+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGCGGCGTTCAGCTACTTAGCGTTAGGCCCTCTTGATGTCGCCTCTGC
CGCGACTACGGCTCCGGGTAGTGTTGAGTTGGTCGCACAAGCAACCACGG
CGGCCGCCTCTGTGGATGTTGGGGCAATCTTCGCAAAGGCTGGTGGGTTC
CTGACTGACTGTACAGCAGTAGTCACCGTGCGAAAACCTTGACGGGTCTA
GTCGTCTAGTCTAGTAGGTCGGGACCGTTCCTTCACGCGATACGAGGTTG
CGAGTGCGCCACACAGAGCTTCGGTTTCGTGCGCTTTCGCGTGTGTCATG
GACAAACACACGGATAGTTTTCTGCAGATGTAACAGCAGTGTAGTGGTAC
AACTCGTTGCCGCTTGTAGTGCGCTAAGATGTGCTGACCAGCGGGTTGGA
TACGTCATCCGGACGTCTTGGTTAATGCCATGTGGATCCCGGGTTCTTCT
TCGTAGGAGGCGTGCTAGTCCTACTCTAGTCCTAGTCGTGACACAATCGT
CGTGCACCCCCCTACAGCAGTAGTTTCAATGCCTCAGCAAGAGCTTCCGA
CACCTTGACCCTGTCCCTTCTACGTCGTACCAATAGTTGTATGGATGGCA
ACACGACCCCGTCGAAACGAATCGAATCCTGTTCCCCGACACCGTTTTTG
TGCCAGGGAGCCGGGCGTTAGGTGGGGGTGCTAGCGGTGCGGCGGCGGCG
GTGGTGCAGGTGCTGTCTCTCATGTGGCTTCGGACCACGATGAACTATCA
GGTGAGCGCAGCAACCGGGTTAGACTAAAGATCTCTTCGCGGTATAGACT
ATCTCTCGTGGCTTGCTCGATGCATGTAGCAGCGAAAGGACGCCGAACAC
CCGTAGGGGTAAGCCCAGACTACACCACAAAGTGTCTCCGTATCTTCTTT
TGCATCTGCTGTGACAAACGACTTGCTTTATGTTTCGTGGCAGCAAGTAT
AAGGCTGGTGCCATTGGGCGCACTGCTGCACCTTTCCCCGCGGTCTGCTT
CACGCGCTTGGACAACGAACCAGCGTCGCCGGCGTTCACGCATGTGTTTG
TTGTCAGTGTGTCTCCACGGCGCCCCCTGCCGCATCGCATACGTACACGC
GCGCACGTTCGCATCGACGGTTTTGTAGCGAAATTTCTGATGCGTGTACA
TCGGTCCTGCGCTTGTGTCTAGCGATATCGTCCAGTGGTAGATGCTGCCG
TGAACTTGGGACCGACTTTGACGATTCGTGCGTCCGACGCGGTATGCACG
CCTCAGTACAAGAACGGGGGCTCTACCAAGGAAGCCCTCCAGACGCTATG
GGAAGAAGGGGGACTTTCGAGGCTGTACCGAGGAGTGTCTTTCGCGCTGG
TGCAAGGCCCTCTTAGCAGGTAGGTCAGAAGTACCAAATGAAGAAGGTGC
CGATCATTTAACAACGCGAAATCTCTTTGCCACAACGCGGCTACTGCACT
GGGGATGGACACGTGGGAGGAGCGGTCTTTGTCACTCCAAGTTTTTTTTC
AGTACCACCATTCCAATGTGTCGGGGGGGGGGGGGGGGCGTACTCATGGT
TGGCATGCCTTAGCGGTTAGACCATTGACCACGCATCCCCACGAGGACAG
AGTCATGTCGGGGGGTGGTGTATTAGTCGTTTTTTCTCCCGAACGAAAAA
CAGGCACCCAAAACCTGAACACCTACCTGCCCACGTCTACCACCCCCATC
GCTCCATTGTTCAAGGTTTGGGGATACGGCCGCAAACGTGGGAGTCCTGG
CCTTGCTGGAGGCATTTGAGTCCACTCGATCGTTGCCACTGCCGGTCAAG
TCGGCGGCGGGGAGCCTCGCTGCGGGATTGTGGCGCATCGGCCTCACGCC
AATAGACGCCTACAAGACCACTTTGCAGGTTAACCGCTACTAGGTTAGGT
TGACCGCCACAGTCTTGGTGTTGGCGTTTTGCACGTTAACGATAGTGTCG
CGGGGCTGTGGTACTATCCCATGCAGCAGGTTGTGCCTGATAAAGCTGAA
ACAACCACAGCCATCAACCACCGTACTTTTTCCGTCGCTCTAGAGACCAT
ACAAGACGTCCTCTCCCATACTTGATATCCACAAGCATCAGCGCGTCACA
GTCTAGACATCGAGCCTGCTCCCCCTTCTACGGCTGTCTCCCCTCTCTTT
CTGCCAAGGTTTCCGGGGCTGAGGGAACCAAGCTCCTGGCGGAGAAAGTG
GCGGCGAACGGACCTACCGTCCTCTTCGAGGGTGCCTTAGCGACCGCCTC
GGCTACATTTGTCGGACACTATCCCTGGTGAGGGTGAGAGATCGACTCGA
TTTCGACCGCTCTTCTTCTGGTCTTTTGTTGTGGGACCAGAAGCCGCCGC
CACGGTTTGTGGGGAGACGACTATGAATAGAGTAGTGCTGCTGTAGTCTT
CGGTTTTCCTCCGCGGTATCGCGTTGTCGAGATGTCGTTCGTTGACGGCA
CCAAATGCTCTACAGCATGGGCCAGTAGTTAAGAAATACCATGGTATTCA
ACCAGTAAATATGGTAGAGTCATGGTAATCCACTAAGAAATATGGTAGAG
GCTCAATTTTTCACCAAGAAAGTTAAATCGCGTTTGTAGGGTTAAAGAGA
TACATTTTTGATTTATTGGCTAGGAGGTGGATCCTACACTAAACTAGCTC
TATACCATGATAACCTGTTCTCGGCGGTGGCGACGAAATACTTGAGAAAC
TGAGTCTGGGATTGTATTTGTGAGCTAGTTCTGTTCTTGTCCATTTGAAG
GAACTCTCTGTCCTGCTGTTGGCATTTCCTCCGCCTTCCGCCCCGTGCTT
CATCCGCCGTACTACCTTGCCGACCTGAACGTCAACCATTTCCTCCCCGT
CAACTTCTGGTCTCCCTCATGTACACACGTGTTGTCCGCCCGCTCTGTCC
TGGAATCGTTCGATTGGAAGGTACTTCACGTACAATTCGTTGGGAGCGTG
GCTGCCCCCGGCTCCATCAGGGGAACCGCTGCTCAAGCTTGGGAGACAGG
CCCTTCTCGGCAAGTTGACGTTTCCTCCTTCAGCTCTCCCGGGGGTGTTG
ATTTTCACGCCTTTCTTTTCATCTCGTAGCCTTGCAGAAAATTGAATGCT
TGTTGTCGGGGATGGATTCGGGTTTTTTTGCGGTACTGAGTACCGACGCC
TTCGGGCGAAACGCCTTGAAATGTGGAAGTGTATTGACACAAGGGCGTAA
AAACAAAAACGTTAGAAAATTAGCAAGTTGCTTGCCGTGAACGCCGGACG
CGAGCATGTCCAAGCCCTTGGAAGCACTCACCCATCACTTGGTTCAACCC
AACCCATCTTCTCGATGCTATGCTCTCTTTTTTTTTTTTGTATCGGTGAT
GGTGTCGGTTCTCTTTTTCTCTAGGGCTGTGTTCTTCTTGCGTGTCGGAC
TGCTGCAGCAACTCCATCCGCGTGATCAAGACGACCAAGCAGACCGCGCC
GATACCGGTACGATCATGCTGCTGAAGAGATACGTGGCATGCACCTAGTA
CTTGTAGCAGAAAAGATAAATGTAGTATTATAGTACCAGTAAGCAAGCAG
AGTGCGCCGAGAACACTGTGCAAGAAAGTGTACATGCATACGTCAGACCA
GCATCGGGTATGAGGGAGGTTAGCACAGCGGCAGAGCGGCGACACCCTAG
CGCTAACACTAACACTACGGGATGAGGGGCTGTCTTCCGATTGCTACCCG
TCCTCTCTAGTCAAACTTTGTTGCCAGCGCAGGGCTGGCGGTTTGCACAA
TAGTCAAATATCACGGTGCACGGGGGAAGCTGACAACCCCCCCCGCTCCC
AATCTTGTGTGAAACACCCGTCTGTCTGCGGACAGCTATCCTACCCGGAA
GCTTTGAAGCAGGTCTTGGACGACGACGGTGTGCCGGGTCTCTTCTTGCG
AGGTCTCCAGACGAGAATCCTCGTCAACGCTCTCCAAGGGGCCTTGTTCG
CGGTTGCGTGGAAGTATTTCCAGGAGCTGTTGGCAAGCGGCGGGGGCGCT
TGA
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Coding sequence (CDS) from alignment at chr_27:6361580..6365582+

>Ec-27_006960.1 ID=Ec-27_006960.1|Name=Ec-27_006960.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=972bp|location=Sequence derived from alignment at chr_27:6361580..6365582+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGCGGCGTTCAGCTACTTAGCGTTAGGCCCTCTTGATGTCGCCTCTGC
CGCGACTACGGCTCCGGGTAGTGTTGAGTTGGTCGCACAAGCAACCACGG
CGGCCGCCTCTGTGGATGTTGGGGCAATCTTCGCAAAGGCTGGGAGCCGG
GCGTTAGGTGGGGGTGCTAGCGGTGCGGCGGCGGCGGTGGTGCAGGTGCT
GTCTCTCATGTGGCTTCGGACCACGATGAACTATCAGTACAAGAACGGGG
GCTCTACCAAGGAAGCCCTCCAGACGCTATGGGAAGAAGGGGGACTTTCG
AGGCTGTACCGAGGAGTGTCTTTCGCGCTGGTGCAAGGCCCTCTTAGCAG
GTTTGGGGATACGGCCGCAAACGTGGGAGTCCTGGCCTTGCTGGAGGCAT
TTGAGTCCACTCGATCGTTGCCACTGCCGGTCAAGTCGGCGGCGGGGAGC
CTCGCTGCGGGATTGTGGCGCATCGGCCTCACGCCAATAGACGCCTACAA
GACCACTTTGCAGGTTTCCGGGGCTGAGGGAACCAAGCTCCTGGCGGAGA
AAGTGGCGGCGAACGGACCTACCGTCCTCTTCGAGGGTGCCTTAGCGACC
GCCTCGGCTACATTTGTCGGACACTATCCCTGGTACTTCACGTACAATTC
GTTGGGAGCGTGGCTGCCCCCGGCTCCATCAGGGGAACCGCTGCTCAAGC
TTGGGAGACAGGCCCTTCTCGGGCTGTGTTCTTCTTGCGTGTCGGACTGC
TGCAGCAACTCCATCCGCGTGATCAAGACGACCAAGCAGACCGCGCCGAT
ACCGCTATCCTACCCGGAAGCTTTGAAGCAGGTCTTGGACGACGACGGTG
TGCCGGGTCTCTTCTTGCGAGGTCTCCAGACGAGAATCCTCGTCAACGCT
CTCCAAGGGGCCTTGTTCGCGGTTGCGTGGAAGTATTTCCAGGAGCTGTT
GGCAAGCGGCGGGGGCGCTTGA
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Synonyms
The feature 'Ec-27_006960.1' has the following synonyms
Synonym
Esi0339_0020
Esi_0339_0020