Ec-27_006890.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-27_006890.1
Unique NameEc-27_006890.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length472
Homology
[Close]
BLAST of Ec-27_006890.1 vs. uniprot
Match: D7FY29_ECTSI (Adenosylmethionine decarboxylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY29_ECTSI)

HSP 1 Score: 787 bits (2032), Expect = 5.860e-274
Identity = 388/388 (100.00%), Postives = 388/388 (100.00%), Query Frame = 1 
Query:  391 MAWPAQMVVEPGDEISGLPEEGNGQPAPTGTRTGPASSLENQEGRGQQGFEGPEKTLEIEFEPDVGHEEGLRAIRREQWDAILEQAQCHILHQRGNDHFDSYVLSESSLFVYKSKLVLKTCGTTTLLRCLPLLTVVSKNYGLNLEWIGYSRKNFTFPTDQTYPHTSFAEEVDFLQGMFSGSAYVHGPLNSDHWYTYVADDCKKSTNAAADRTLNMMMYDLEPEVAQNFYKTDKIQTGEDVSSRSGIKSVLPNAALQDHLFEPCGYSMNALEGQAYYTVHVTPEPDFSYASFETNVRLPDYDALVRGVLEVFRPRKFTMTLFGEDSGIEDIKQSPFDYSDIACGPTSASSTSARYERTLKTTTNFSGDYFSQMGNWVREQSAAAAATPT 1554
            MAWPAQMVVEPGDEISGLPEEGNGQPAPTGTRTGPASSLENQEGRGQQGFEGPEKTLEIEFEPDVGHEEGLRAIRREQWDAILEQAQCHILHQRGNDHFDSYVLSESSLFVYKSKLVLKTCGTTTLLRCLPLLTVVSKNYGLNLEWIGYSRKNFTFPTDQTYPHTSFAEEVDFLQGMFSGSAYVHGPLNSDHWYTYVADDCKKSTNAAADRTLNMMMYDLEPEVAQNFYKTDKIQTGEDVSSRSGIKSVLPNAALQDHLFEPCGYSMNALEGQAYYTVHVTPEPDFSYASFETNVRLPDYDALVRGVLEVFRPRKFTMTLFGEDSGIEDIKQSPFDYSDIACGPTSASSTSARYERTLKTTTNFSGDYFSQMGNWVREQSAAAAATPT
Sbjct:    1 MAWPAQMVVEPGDEISGLPEEGNGQPAPTGTRTGPASSLENQEGRGQQGFEGPEKTLEIEFEPDVGHEEGLRAIRREQWDAILEQAQCHILHQRGNDHFDSYVLSESSLFVYKSKLVLKTCGTTTLLRCLPLLTVVSKNYGLNLEWIGYSRKNFTFPTDQTYPHTSFAEEVDFLQGMFSGSAYVHGPLNSDHWYTYVADDCKKSTNAAADRTLNMMMYDLEPEVAQNFYKTDKIQTGEDVSSRSGIKSVLPNAALQDHLFEPCGYSMNALEGQAYYTVHVTPEPDFSYASFETNVRLPDYDALVRGVLEVFRPRKFTMTLFGEDSGIEDIKQSPFDYSDIACGPTSASSTSARYERTLKTTTNFSGDYFSQMGNWVREQSAAAAATPT 388
[Close]
BLAST of Ec-27_006890.1 vs. uniprot
Match: A0A2R5GFL0_9STRA (S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GFL0_9STRA)

HSP 1 Score: 325 bits (833), Expect = 6.930e-97
Identity = 160/348 (45.98%), Postives = 233/348 (66.95%), Query Frame = 1 
Query:  535 GFEGPEKTLEIEFEPDVGHEEGLRAIRREQWDAILEQAQCHILHQRGNDHFDSYVLSESSLFVYKSKLVLKTCGTTTLLRCLPLLTVVSKNYGLNLEWIGYSRKNFTFPTDQTYPHTSFAEEVDFLQ-------GMFSGSAYVHGPLNSDHWYTYVADDCKKSTNAAADRTLNMMMYDLEPEVAQNFYKTDKIQTGEDVSSRSGIKSVL-----PNAALQDHLFEPCGYSMNALEGQAYYTVHVTPEPDFSYASFETNVRLPDYDALVRGVLEVFRPRKFTMTLFGEDSGIEDIKQSPFDYSDIACGPTSASSTSARYERTLKTTTNFSGDYFSQMGNWVREQSAAAA 1542
            GFEGPEK LEI+F P +G  + LR + RE WDAIL+ A+C IL +  N+  D+YVLSESSLFVY  K+ +KTCGTTTLLRCLPLL  V+++ GL L+WIGY+RKNF FP DQ +PH+SFA+E+++ +       G  +G AY+ G L +DHWY YVAD C  + N +++R +N+MMYDL+ +V Q FY+  ++    D    +   + +     P+A + D +FEPCGYS+NAL+ +++YT+HVTPEP++SYASFETN+ + DY  L+   L  FRP++F +T+F +++ +E I+Q P   + +A G T        Y R  ++TT+   DY  +M  +V E   +++
Sbjct:   52 GFEGPEKILEIDFNPSMG--KSLREVNRETWDAILDLARCQILSKMSNEFLDAYVLSESSLFVYSHKVFIKTCGTTTLLRCLPLLLKVAESRGLELQWIGYTRKNFIFPDDQEFPHSSFAQEIEYTKKCRGPQGGALNGGAYILGDLLADHWYVYVADYCGDA-NQSSERNVNIMMYDLDIDVCQGFYRQPELDLEADAQRAAYEVAKINDLCGPDAIVDDRMFEPCGYSLNALQDESFYTLHVTPEPEYSYASFETNLEISDYTDLLTKTLRAFRPKRFAITMFADEAALEKIRQCPTQLTSVAAGCT--------YRRETQSTTSIRADYACRMSVYVMENQTSSS 388
[Close]
BLAST of Ec-27_006890.1 vs. uniprot
Match: D7G8P6_ECTSI (Adenosylmethionine decarboxylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8P6_ECTSI)

HSP 1 Score: 320 bits (819), Expect = 2.270e-94
Identity = 157/333 (47.15%), Postives = 221/333 (66.37%), Query Frame = 1 
Query:  538 FEGPEKTLEIEFEPDVGHEEGLRAIRREQWDAILEQAQCHILHQRGNDHFDSYVLSESSLFVYKSKLVLKTCGTTTLLRCLP-LLTVVSKNYGLNLEWIGYSRKNFTFPTDQTYPHTSFAEEVDFLQG------MFSGSAYVHGPLNSDHWYTYVADDCKKSTNAAADRTLNMMMYDLEPEVAQNFYKTDKIQTGEDVSSRSGIKSVLPNAALQDHLFEPCGYSMNALEGQAYYTVHVTPEPDFSYASFETNVRLPDYDALVRGVLEVFRPRKFTMTLFGEDSGIEDIKQSPFDYSDIACGPTSASSTSARYERTLKTTTNFSGDYFSQMGNW 1515
            FEGPEKTLE+ F+P +G+ +G RA+ R+  D +  +A+C ILHQ  ND+ D+YVLSESSLFVY  K+V+KTCGTTTLLRC+  LL    +  GL LEW+GYSRKNFTFP+DQ +PH+SF +E+ +L+         +G+ YV GP+  DHW+ Y+AD C +    A DRT+NMMM+D+ P+ A++FYK +   TG +++ ++GI  ++P A + D  F+PCGYSMNA+   +YYT+HVTPE   SYASFETN     Y +++  VL VFRP+++ +T+  + +G+  I ++PFD   I      A     +Y RT   +T   GD    MG W
Sbjct:   81 FEGPEKTLEVCFKPGIGNPQGCRALTRQSLDRMCSRAKCTILHQISNDYLDAYVLSESSLFVYPHKVVMKTCGTTTLLRCVATLLQAALEQQGLVLEWMGYSRKNFTFPSDQLFPHSSFEQELQYLRAHTHLEKRLNGAGYVLGPVTGDHWFVYIADKCDRPDYTATDRTINMMMFDMHPDTAKHFYK-EACPTGREMTKKTGIAELVPGAVVDDFAFDPCGYSMNAILYDSYYTIHVTPEESCSYASFETNNPFKSYRSIINNVLNVFRPKRWVLTMVADKAGLNTITENPFDVEKIELPLRKA-----QYIRTSVCSTVVEGDCVCIMGAW 407
[Close]
BLAST of Ec-27_006890.1 vs. uniprot
Match: W7T3C1_9STRA (Adenosylmethionine decarboxylase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T3C1_9STRA)

HSP 1 Score: 318 bits (816), Expect = 5.220e-93
Identity = 162/345 (46.96%), Postives = 224/345 (64.93%), Query Frame = 1 
Query:  538 FEGPEKTLEIEFEPDVGHEEGLRAIRREQWDAILEQAQCHILHQRGNDHFDSYVLSESSLFVYKSKLVLKTCGTTTLLRCLPLLTVVSKNYGLNLEWIGYSRKNFTFPTDQTYPHTSFAEEVDFLQG------MFSGSAYVHGPLNSDHWYTYVADDCKKSTNAAADRTLNMMMYDLEPEVAQNFYKTDKIQTGEDVSSRSGIKSVLPNAALQDHLFEPCGYSMNALEGQAYYTVHVTPEPDFSYASFETNVRLPDYDALVRGVLEVFRPRKFTMTLFGEDSGIEDIKQS----PFDYSDIACGPTSASSTSARYERTLKTTTNFSGDYFSQMGNWVREQSAAAA 1542
            FEGPEKTLE+ F+P VGH  G R + R Q D +  +A+C IL+Q  N + D+YVLSESSLFV+  K++LKTCGTTTLLRCLP L   +   GL LEW+GYSRKN++FP DQ +PH+SF +E+ +L+         +GS YV GP+  DH+Y YVAD C + +    DR LN+MM+D++PE A  FYK ++    ++++ +SGI  ++P A++    F+PCGYSMNA+    Y T+HVTPE D SYASFETN  L  YD+L+  VL VFRPR+F +T+  + + + +++ +    PF+ + +A     A      Y R   +TT F  DY   MG W+REQ A  A
Sbjct:  129 FEGPEKTLEVCFKPGVGHARGCRELTRRQLDVLCRKARCTILNQMSNAYQDAYVLSESSLFVWPFKMMLKTCGTTTLLRCLPRLLRYTAALGLELEWVGYSRKNYSFPGDQAFPHSSFDQELSYLRSHSKLSAKLNGSGYVLGPVTGDHFYVYVADQCVRPSYECHDRVLNIMMFDMDPEAAAVFYK-EQSGDAKEMTQKSGIADLVPGASIDAFAFDPCGYSMNAITYGNYATIHVTPEADCSYASFETNTPLKSYDSLINNVLRVFRPRRFVLTMMADQAAVLEMESNKQRLPFERAHVAVPGLGA------YSRASSSTTIFEKDYRCFMGTWLREQGAGGA 466
[Close]
BLAST of Ec-27_006890.1 vs. uniprot
Match: A0A812R309_9DINO (Adenosylmethionine decarboxylase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812R309_9DINO)

HSP 1 Score: 311 bits (796), Expect = 2.520e-91
Identity = 157/331 (47.43%), Postives = 218/331 (65.86%), Query Frame = 1 
Query:  535 GFEGPEKTLEIEFEPDVGHEEGLRAIRREQWDAILEQAQCHILHQRGNDHFDSYVLSESSLFVYKSKLVLKTCGTTTLLRCLPLLTVVSKNYGLNLEWIGYSRKNFTFPTDQTYPHTSFAEEVDFLQGMF-SGSAYVHGPLNSDHWYTYVADDCKKSTNAAADRTLNMMMYDLEPEVAQNFYKT--DKIQTGEDVSSRSGIKSVLPNAALQDHLFEPCGYSMNALEGQAYYTVHVTPEPDFSYASFETNVRLPDYDALVRGVLEVFRPRKFTMTLFGEDSGIEDIKQSPFDYSDIACGPTSASSTSARYERTLKTTTNFSGDYFSQMGNWV 1518
            GFEGPEK LE++F P  G EEGL AI  ++W  +L+ A C +L    N+HF SYVLSESS+FVY+ K+++KTCGTTTLL  LP +    K  G+++EW+ +SRK+F+FP +Q +PH    EEV FLQ     GSAYV GP+  DHW  +VAD C++ +  + D TLN+MMYD++P VA  F +    +  T  +V+S + I ++LP + +QD LF+PCGYSMN L G+AY+T+HVTPE   SYASFETNV    Y  L+R VL VF P ++++TLF + +G+E +   PF        P    + + +Y  T K+ T F+GDY S +GN+ 
Sbjct:   11 GFEGPEKVLELDFVPGKGPEEGLFAIPSDEWKGMLKHAACGVLSIVTNEHFHSYVLSESSMFVYRHKVIIKTCGTTTLLAMLPHVERRIKELGMDIEWLAFSRKDFSFPAEQKFPHRGIQEEVSFLQAAHPQGSAYVLGPITGDHWMVFVADYCERPSAESTDCTLNVMMYDIDPSVAAMFQEQYEGRTLTAAEVTSLTRIDTLLPGSTIQDVLFQPCGYSMNGLLGEAYWTIHVTPESHCSYASFETNVTTSTYTPLLRAVLGVFMPARYSVTLFADKAGLEGVADMPFHSLVAPPLPDDHPAAAKQYVLTAKSRTEFAGDYCSVLGNYT 341
[Close]
BLAST of Ec-27_006890.1 vs. uniprot
Match: A0A7S1UFX8_9STRA (Adenosylmethionine decarboxylase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFX8_9STRA)

HSP 1 Score: 311 bits (796), Expect = 4.380e-91
Identity = 151/294 (51.36%), Postives = 203/294 (69.05%), Query Frame = 1 
Query:  538 FEGPEKTLEIEFEPDVGHEEGLRAIRREQWDAILEQAQCHILHQRGNDHFDSYVLSESSLFVYKSKLVLKTCGTTTLLRCLPLLTVVSKNY-GLNLEWIGYSRKNFTFPTDQTYPHTSFAEEVDFLQ------GMFSGSAYVHGPLNSDHWYTYVADDCKKSTNAAADRTLNMMMYDLEPEVAQNFYKTDKIQTGEDVSSRSGIKSVLPNAALQDHLFEPCGYSMNALEGQAYYTVHVTPEPDFSYASFETNVRLPDYDALVRGVLEVFRPRKFTMTLFGEDSGIEDIKQSPFD 1398
            FEGPEKTLE+ F+P VG E G R + R   + IL +A+C I+    N H D+YVLSESSLFVY  K+VLKTCG TTLLRCLP L   ++ Y G  LEW+GYSRKNF +PT Q +PHTSF +E+ +LQ         SGSA++ GPL  DHW+ YVAD  ++     +DRT+N+MM+D+  + AQ FYK DK  T E+ +  SGI  ++P A +    FEPCGYSMNA++  +Y T+H+TPE   SYASFETN +L  Y AL+R VL++FRPR+F +T+F +++G+  + + PF+
Sbjct:   83 FEGPEKTLEVCFKPGVGLEGGCRNLPRASLNRILTRAKCTIMSIVSNSHLDAYVLSESSLFVYPYKVVLKTCGATTLLRCLPYLLREARRYCGCELEWVGYSRKNFAYPTQQLFPHTSFNDEMGYLQKHSKYYDKLSGSAHILGPLTGDHWFVYVADKSERPMEMESDRTINIMMFDMHEDAAQMFYK-DKYPTAEEQTMASGINMLMPGAQIDAQCFEPCGYSMNAIQHDSYSTIHITPESACSYASFETNTKLRSYTALIRNVLQLFRPRRFVLTMFADEAGLASLSEDPFE 375
[Close]
BLAST of Ec-27_006890.1 vs. uniprot
Match: A0A835ZL65_9STRA (Adenosylmethionine decarboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL65_9STRA)

HSP 1 Score: 308 bits (790), Expect = 5.680e-90
Identity = 159/344 (46.22%), Postives = 216/344 (62.79%), Query Frame = 1 
Query:  538 FEGPEKTLEIEFEPDVGHEEGLRAIRREQWDAILEQAQCHILHQRGNDHFDSYVLSESSLFVYKSKLVLKTCGTTTLLRCLP-LLTVVSKNYGLNLEWIGYSRKNFTFPTDQTYPHTSFAEEVDFLQ------GMFSGSAYVHGPLNSDHWYTYVADDCKKSTNAAADRTLNMMMYDLEPEVAQNFYKTDKIQ-----------TGEDVSSRSGIKSVLPNAALQDHLFEPCGYSMNALEGQAYYTVHVTPEPDFSYASFETNVRLPDYDALVRGVLEVFRPRKFTMTLFGEDSGIEDIKQSPFDYSDIACGPTSASSTSARYERTLKTTTNFSGDYFSQMGNW 1515
            FEGPEKTLE+ F+P VG + G RA+ R Q D I ++A+C IL +  N H D+YVLSESSLFVY+ K+V+KTCGTTTLLRC+  LL    +  G+ LEW+GYSRKNFTFP DQ YPH SF +E+D+L+          GS +V GP+  DHW+ YVAD   +    A DR +N+MM+DL P+ A  F + D               G D++  SG+  ++P A +    FEPCGYSMNA++ ++YYT+HVTPE   SYASFETN     Y ++V  VL VFRPR+F +T+  +++G++ + +SPFD   +   P  A   +A Y RT   +T   GD    + N+
Sbjct:   96 FEGPEKTLEVCFKPGVGDQHGCRALTRAQLDQICKRARCTILSRMSNAHLDAYVLSESSLFVYRHKVVVKTCGTTTLLRCIAYLLQHAGRGLGMELEWVGYSRKNFTFPGDQLYPHASFEQELDYLRQHQHLSARLDGSGHVLGPVTGDHWFVYVADKYDRPNFTATDRVINIMMFDLHPDCAAKFVRGDAAAGADGTAVSARAAGRDMTVASGVADLVPGATVDACAFEPCGYSMNAIQFESYYTIHVTPEAACSYASFETNNPYRSYRSIVNNVLNVFRPRRFVLTMMADEAGLKTMAESPFDQLSL---PAPAFGGAAAYARTSMCSTKVEGDCCLLLANY 436
[Close]
BLAST of Ec-27_006890.1 vs. uniprot
Match: H3GXV0_PHYRM (S-adenosylmethionine decarboxylase proenzyme n=21 Tax=Peronosporaceae TaxID=4777 RepID=H3GXV0_PHYRM)

HSP 1 Score: 298 bits (762), Expect = 5.590e-87
Identity = 157/343 (45.77%), Postives = 208/343 (60.64%), Query Frame = 1 
Query:  538 FEGPEKTLEIEFEPDVGHEEGLRAIRREQWDAILEQAQCHILHQRGNDHFDSYVLSESSLFVYKSKLVLKTCGTTTLLRCLPLLTVVSKNYGLNLEWIGYSRKNFTFPTDQTYPHTSFAEEVDFLQGMF-SGSAYVHGPLNSDHWYTYVAD-DCKKSTNAAA-----------DRTLNMMMYDLEPEVAQNFYKT-DKIQTGEDVSSRSGIKSVLPNAALQDHLFEPCGYSMNALEGQAYYTVHVTPEPDFSYASFETNVRLPDYDALVRGVLEVFRPRKFTMTLFGEDSGIEDIKQSPFDYSDIACGPTSASSTSARYERTL-KTTTNFSGDYFSQMGNWVR 1521
            FEGPEK LEI+F+  VGH  G R + R   D +LE  QC IL +  N+H D+YVLSESSLFVY  K+VLKTCGTTTLL+CLP +   S+  GL++EW+ YSRKN+TFP +Q YPHTSF  EV FL   F  GSA+V GPLN DHWY Y  D D      A             + TL+++M D+ P VA+ F+K  D   T   ++  SGI+ ++P A + D  F+PCGYSMN +   AYYT+H+TPE D SY SFETN RL  Y +L++ VL  FRP K++++++ E + +E  K + F    +             Y+R    T   F GDY  +M N+ +
Sbjct:   31 FEGPEKNLEIDFKHGVGHPRGFREVARADLDEMLEAGQCQILSRTSNEHIDAYVLSESSLFVYAHKVVLKTCGTTTLLKCLPFIKTFSERLGLSIEWVNYSRKNYTFPEEQKYPHTSFQTEVAFLSSYFPDGSAHVLGPLNRDHWYIYAWDADIHGEPGALTHNYALEEPGQNESTLHVLMQDMHPSVAKQFFKNNDSTLTSRRMTIESGIRDLVPGAVIDDFAFDPCGYSMNGILFDAYYTIHITPESDCSYVSFETNARLRSYQSLLKNVLRCFRPAKYSVSVYTERNALESSKNNMFAEDLVKIDD------DLLYKRKGGHTQATFEGDYMCRMANFAQ 367
[Close]
BLAST of Ec-27_006890.1 vs. uniprot
Match: A0A484E2K2_BRELC (Adenosylmethionine decarboxylase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E2K2_BRELC)

HSP 1 Score: 298 bits (762), Expect = 6.140e-87
Identity = 155/345 (44.93%), Postives = 210/345 (60.87%), Query Frame = 1 
Query:  538 FEGPEKTLEIEFEPDVGHEEGLRAIRREQWDAILEQAQCHILHQRGNDHFDSYVLSESSLFVYKSKLVLKTCGTTTLLRCLPLLTVVSKNYGLNLEWIGYSRKNFTFPTDQTYPHTSFAEEVDFLQGMF-SGSAYVHGPLNSDHWYTYVAD--------------DCKKSTNAAADRTLNMMMYDLEPEVAQNFYK-TDKIQTGEDVSSRSGIKSVLPNAALQDHLFEPCGYSMNALEGQAYYTVHVTPEPDFSYASFETNVRLPDYDALVRGVLEVFRPRKFTMTLFGEDSGIEDIKQSPFDYSDIACGPTSASSTSARYERTL-KTTTNFSGDYFSQMGNWVR 1521
            FEGPEK LEI+F+  VGH  GLR + R   D +LE  QC IL +  N+H D+YVLSESS+F+Y  K+VLKTCGTTTLL+CLP +   S++ GL++EW+ YSRKN+TFP +Q YPHTSF  EV FL   F  GSA+V GPLN DHWY Y  D                     AA + TL ++M D+ P+VA+ F+K TD   T   ++  SGI+ ++P A + D  F+PCGYSMN +   AYYT+H+TPE   SY SFETN RL  Y +L++ VL  FRP K++++++ + + +E  K +     D+             Y+R    T   F GDY  +M N+ +
Sbjct:   31 FEGPEKNLEIDFKAGVGHVRGLREVPRHNLDEMLEAGQCQILSRTSNEHIDAYVLSESSMFIYTHKIVLKTCGTTTLLKCLPFIKTFSEHLGLSIEWVSYSRKNYTFPEEQKYPHTSFHTEVAFLSSFFPDGSAHVLGPLNHDHWYIYAWDADIHEQPASRTQSPSYSLKETAANESTLQILMQDMHPKVAKQFFKSTDSSMTSRRMTIESGIRDLVPGAIIDDFSFDPCGYSMNGILFDAYYTIHITPESHCSYVSFETNARLRSYASLLKNVLRCFRPAKYSVSVYTDRNALESSKGNNMFVEDLV-----KVDDDLLYKRKGGHTQATFEGDYMCRMANFAQ 370
[Close]
BLAST of Ec-27_006890.1 vs. uniprot
Match: A0A0P1AUS8_PLAHL (Adenosylmethionine decarboxylase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AUS8_PLAHL)

HSP 1 Score: 297 bits (760), Expect = 1.090e-86
Identity = 156/349 (44.70%), Postives = 210/349 (60.17%), Query Frame = 1 
Query:  538 FEGPEKTLEIEFEPDVGHEEGLRAIRREQWDAILEQAQCHILHQRGNDHFDSYVLSESSLFVYKSKLVLKTCGTTTLLRCLPLLTVVSKNYGLNLEWIGYSRKNFTFPTDQTYPHTSFAEEVDFLQGMF-SGSAYVHGPLNSDHWYTYVAD-DCKKSTN-----------AAADRTLNMMMYDLEPEVAQNFYKTDKIQ-TGEDVSSRSGIKSVLPNAALQDHLFEPCGYSMNALEGQAYYTVHVTPEPDFSYASFETNVRLPDYDALVRGVLEVFRPRKFTMTLFGEDSGIEDIKQSPFDYSDIACGPTSASSTSARYERTL-------KTTTNFSGDYFSQMGNWVR 1521
            FEGPEK LEI+F+  +GH  GLR + R   D +LE  QC IL +  NDH D+YVLSESS+F+Y  K+VLKTCGTTTLL+CLP +   S   GL +EW+ YSRKN+TFP +Q YPHTSF  EV FL   F +GSA+V GPLN DHWY Y  D D  + T+            A + TL ++M D++P VA+ F+K D    T   ++  SGI+ ++P A + D  F+PCGYSMN +   AYYT+H+TPE   SY SFETN RL  Y +L++ VL  FRP K++++++ + + +E  K           G    +  S + +  L        T   F GDY  +M N+ R
Sbjct:   31 FEGPEKNLEIDFKFGIGHAHGLREVPRHDLDEMLEAGQCQILSRTSNDHIDAYVLSESSMFIYAHKIVLKTCGTTTLLKCLPFIKTFSNRLGLEIEWVSYSRKNYTFPEEQKYPHTSFQTEVAFLSSYFPNGSAHVLGPLNHDHWYIYAWDADIHEHTDLLPVNLPHKEVGANESTLQVLMQDMDPSVAKQFFKNDDSTITSRRMTIESGIRDLVPGALIDDFAFDPCGYSMNGILFDAYYTIHITPESHCSYVSFETNARLRSYASLLKNVLRCFRPAKYSVSVYTDRNALESAK-----------GDNMFAEDSVKIDDDLLYKRKGGHTQATFEGDYMCRMANFAR 368
The following BLAST results are available for this feature:
BLAST of Ec-27_006890.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FY29_ECTSI5.860e-274100.00Adenosylmethionine decarboxylase n=2 Tax=Ectocarpu... [more]
A0A2R5GFL0_9STRA6.930e-9745.98S-adenosylmethionine decarboxylase proenzyme n=1 T... [more]
D7G8P6_ECTSI2.270e-9447.15Adenosylmethionine decarboxylase n=2 Tax=Ectocarpu... [more]
W7T3C1_9STRA5.220e-9346.96Adenosylmethionine decarboxylase n=2 Tax=Monodopsi... [more]
A0A812R309_9DINO2.520e-9147.43Adenosylmethionine decarboxylase n=1 Tax=Symbiodin... [more]
A0A7S1UFX8_9STRA4.380e-9151.36Adenosylmethionine decarboxylase n=2 Tax=Phaeomona... [more]
A0A835ZL65_9STRA5.680e-9046.22Adenosylmethionine decarboxylase n=1 Tax=Tribonema... [more]
H3GXV0_PHYRM5.590e-8745.77S-adenosylmethionine decarboxylase proenzyme n=21 ... [more]
A0A484E2K2_BRELC6.140e-8744.93Adenosylmethionine decarboxylase n=1 Tax=Bremia la... [more]
A0A0P1AUS8_PLAHL1.090e-8644.70Adenosylmethionine decarboxylase n=1 Tax=Plasmopar... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:6311623..6320611 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score322.0
Seed ortholog evalue4.6e-85
Seed eggNOG ortholog2880.D7G8P6
Preferred nameAMD1
Length3881
KEGG rclassRC00299
KEGG koko:K01581,ko:K01611,ko:K15203
KEGG ReactionR00178,R00670
KEGG Pathwayko00270,ko00330,ko00480,ko01100,ko01110,ko01130,map00270,map00330,map00480,map01100,map01110,map01130
KEGG ModuleM00034,M00133,M00134
Hectar predicted targeting categoryother localisation
Gene idEc-27_006890.1
GOsGO:0001701,GO:0003674,GO:0003824,GO:0004014,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006576,GO:0006595,GO:0006596,GO:0006597,GO:0006732,GO:0006766,GO:0006767,GO:0006790,GO:0006807,GO:0006950,GO:0006952,GO:0007275,GO:0008150,GO:0008152,GO:0008215,GO:0008216,GO:0008295,GO:0009058,GO:0009108,GO:0009110,GO:0009308,GO:0009309,GO:0009605,GO:0009607,GO:0009617,GO:0009790,GO:0009792,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0015939,GO:0015940,GO:0016032,GO:0016053,GO:0016458,GO:0016829,GO:0016830,GO:0016831,GO:0017144,GO:0019058,GO:0019079,GO:0019222,GO:0019752,GO:0019808,GO:0019810,GO:0032501,GO:0032502,GO:0032787,GO:0034641,GO:0042364,GO:0042398,GO:0042401,GO:0042742,GO:0043009,GO:0043167,GO:0043169,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046500,GO:0048519,GO:0048731,GO:0048856,GO:0050789,GO:0050829,GO:0050896,GO:0051186,GO:0051188,GO:0051704,GO:0051707,GO:0060255,GO:0065007,GO:0070405,GO:0071704,GO:0072330,GO:0097164,GO:0098542,GO:0099402,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.S-adenosylmethioninamine biosynthetic process
EggNOG OGsKOG0788@1,KOG0788@2759
EC4.1.1.17,4.1.1.50
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03021
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_006890Ec-27_006890Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_27 6311623..6320611 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006890.1Ec-27_006890.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_27 6311765..6318288 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006890.1.1Ec-27_006890.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6311623..6311998 +
Ec-27_006890.1.2Ec-27_006890.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6313720..6313989 +
Ec-27_006890.1.3Ec-27_006890.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6315015..6315142 +
Ec-27_006890.1.4Ec-27_006890.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6315906..6316002 +
Ec-27_006890.1.5Ec-27_006890.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6316445..6316663 +
Ec-27_006890.1.6Ec-27_006890.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6316829..6316966 +
Ec-27_006890.1.7Ec-27_006890.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6317762..6317920 +
Ec-27_006890.1.8Ec-27_006890.1.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6318118..6320611 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_0068905UTR:Ec-27_006890.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_27 6311623..6311764 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006890.1CDS:Ec-27_006890.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_27 6311765..6311998 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_0068903UTR:Ec-27_006890.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_27 6318289..6320611 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-27_006890.1 ID=Ec-27_006890.1|Name=Ec-27_006890.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=472bp
MQGKTGMEARVRVHPQHPQQDKAAKHTFMVGLCLLCHRAASWVPAPVPSA
VSRPRYGRRPNVGAGGRMWLTASPVIDSPRIADMAWPAQMVVEPGDEISG
LPEEGNGQPAPTGTRTGPASSLENQEGRGQQGFEGPEKTLEIEFEPDVGH
EEGLRAIRREQWDAILEQAQCHILHQRGNDHFDSYVLSESSLFVYKSKLV
LKTCGTTTLLRCLPLLTVVSKNYGLNLEWIGYSRKNFTFPTDQTYPHTSF
AEEVDFLQGMFSGSAYVHGPLNSDHWYTYVADDCKKSTNAAADRTLNMMM
YDLEPEVAQNFYKTDKIQTGEDVSSRSGIKSVLPNAALQDHLFEPCGYSM
NALEGQAYYTVHVTPEPDFSYASFETNVRLPDYDALVRGVLEVFRPRKFT
MTLFGEDSGIEDIKQSPFDYSDIACGPTSASSTSARYERTLKTTTNFSGD
YFSQMGNWVREQSAAAAATPT*
back to top

spliced messenger RNA

>Ec-27_006890.1 ID=Ec-27_006890.1|Name=Ec-27_006890.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3881bp|location=Sequence derived from alignment at chr_27:6311623..6320611+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ACTGGTCATCGTCTCTCGTGCGGGGCCCCCTCGATTGCTCTAAGTAGCAA
CGTAGCAACGACACGTGGGCGTCCTGAGGCTGTGCTCGATTGCCTTCCGC
ACGCGCTGTGGGTAGCCTACGAGCAGTGACCAACCTCTTGGGATGCAGGG
GAAGACGGGCATGGAGGCCAGAGTAAGAGTACACCCTCAACATCCGCAAC
AGGACAAGGCAGCTAAGCATACGTTCATGGTCGGTCTCTGCCTCCTTTGT
CACCGTGCTGCGTCGTGGGTACCAGCGCCAGTGCCCTCTGCGGTCTCGAG
ACCACGGTATGGGCGCAGACCCAATGTTGGCGCCGGTGGCAGAATGTGGC
TAACTGCCTCTCCAGTCATTGATTCGCCCCGAATAGCAGACATGGCATGG
CCTGCACAAATGGTGGTTGAACCAGGAGACGAGATCTCGGGTCTGCCTGA
AGAGGGGAACGGCCAACCAGCACCAACGGGCACCAGAACAGGACCGGCTT
CTTCCCTGGAGAACCAGGAGGGCAGGGGGCAGCAGGGGTTCGAGGGTCCC
GAGAAGACTCTTGAGATCGAGTTCGAGCCGGACGTTGGGCACGAGGAAGG
TCTCAGGGCCATCAGGAGGGAGCAGTGGGATGCCATACTGGAGCAGGCGC
AGTGCCACATCCTGCACCAGCGAGGAAACGACCACTTCGACTCGTACGTG
CTGTCGGAGAGCAGCCTCTTCGTTTACAAGAGCAAGCTCGTGCTCAAGAC
CTGTGGCACCACCACCCTCCTAAGGTGTCTACCGCTACTGACGGTGGTAT
CGAAGAACTACGGGCTGAACCTGGAGTGGATAGGGTACTCGAGGAAGAAC
TTCACGTTTCCAACGGATCAGACCTACCCGCACACCTCATTCGCGGAAGA
GGTGGATTTCCTTCAGGGGATGTTCTCGGGCTCTGCCTACGTGCACGGGC
CTTTGAACAGCGACCACTGGTACACGTATGTGGCCGACGACTGCAAGAAG
TCAACCAATGCGGCTGCCGACAGGACCCTGAACATGATGATGTACGACCT
GGAGCCGGAGGTGGCTCAAAACTTCTACAAGACGGACAAAATCCAAACCG
GCGAAGACGTGTCGTCGCGATCAGGAATAAAGAGCGTGCTGCCAAACGCA
GCCTTGCAGGACCACCTGTTCGAGCCGTGCGGGTACAGCATGAACGCGCT
CGAAGGCCAAGCTTACTACACCGTTCACGTGACCCCTGAGCCCGACTTCA
GCTACGCCTCCTTCGAGACGAACGTGCGCTTGCCGGACTACGATGCCCTC
GTGAGAGGGGTTTTGGAGGTGTTTCGACCAAGGAAGTTCACCATGACACT
TTTCGGGGAAGATTCGGGGATAGAGGACATCAAACAGAGTCCGTTCGACT
ACTCGGATATCGCCTGCGGTCCCACAAGCGCTAGCTCCACCAGCGCGCGC
TACGAGCGAACGCTCAAGACGACCACCAACTTCTCTGGAGACTACTTTAG
TCAGATGGGGAACTGGGTGAGGGAACAGTCGGCGGCGGCGGCGGCGACGC
CAACATGATCCCAGCCAGCTGTACGAGACCAGCCCGAGGTCTTTGGCGCT
GGTATGAGCACTTAACTCTGTAGCCGGTAGTGTAGTAGCCACCTGCGGTT
GTCTTGGATGTCAGAGACGGACAGGGGGGAGCTTAACTCGCTCCTGCCCT
ACAAGTACAAGGTAGGGATCCGAAGGGCGGTGCGATGATAAAATGTTAGT
TTCCGTGTGGGCAGCTTCGAAAAAAGGTTACCCGAGCCTAACGGGGTTCC
GATAGTTGATCCGACTGAAAGCCTTTCCCAAGCGGTGCTCCGCATGCTTC
AAAGTTGCGATGGCGTGAGGGGACGGATTTTTGTCGCATCCCAGTGGTCC
ATTAGACCTTGATCGTCGTGTGCATGCGGTGAAGGGTGGCAATATAGCTT
GGGGTATGTAGGTCCTGCAATCGGTACACTAGCATACCTTTAGAGCCAAC
TGCCGTGCCTGTCTCAGTTTTGGGGGGGGAGAAAATCCCTCAAGAAGGCG
TGCCTGTGTGCGGGAGACACGCATAACCGTTGTTGCATACGCACAGGATG
CTTGTACGCCCGGTAGTAGCGATGCCGAACGGCAGCAGTGCTGGTGTTGA
TGTTTCAAGGGCGACTTCTCTTGAGGTAGAGGACGCTTGCGACTTCGTTG
CTGATCACTTGCTGGCCTCTTGAGCCTGCTGGCGCAAGGCTGGCTCTCTA
GGGAAGGCGTCTGGTGCGTATCGCCACTCATCTCTCCGTCTTTTTATGAT
AAGTGTCTGGCCGGGTGGTGTCATGCAGTAAGCAACCTTTGCATTCCCGA
AAATTTTGCGCACCACGCGATTGCCTGTGTAAGGGTCGTCTGTGTGTGTG
TGTGTGTGTGTGCCTGTTACATTGTTTTGTTTTCCGTGTGCTTTGTTGCT
CTTTTCTTCTGTGGCTGGTGCCGAAGGATGATTTGGGAAGTAATTGCGGC
TGGAGGTGTCGAGAGAAGTAAAGGACGCGGCACAAGCAGTCATTGTACAA
AGACCTGGGTGACACCGGGTAGTTAGAAAAGCACTATAATAGCGCGTTAG
GTTGTCAGGCTGAGCTTCGGTGTCGACAACAATAGTAGTGTATCGGCCTT
CTATGATCTAACGCGTTATGATAGCGCGTGCCTTGTCTCCGTAGAGAAAC
TTGGATTTGTCCTCTTTGAGTTGACGTAGGTAGTTGGATGGTCTAGGATG
AGCTTTACGGTCTGCACCTGCGGTTGTCTCCTACGAGAGCCTCCTCACGA
ACTGGCGAACTGGCCGTTCGTAATAATTTAGTGTGTTTCCGTCGATGGGC
CGGGTATGTCTGGCGTCGGTATGACCACAACACCTGGCGCTGACTATACG
ATAGGCAGTAGAGACGAAAGGAAAAGCATAAGGTAGGTGGTGAAGGGCGT
GTGATGTTGGTCCCCCTAAGGAGGTAGTAGCCCTCCACTGTCTCATTGAA
CTCGGCGATACCTCCAGCATTGGCTTCCTTTTTTGTTCATGTGTGCAAGT
GCGTGGACATGTGCTACTTGTTCTTGCCGATTATCTCACAATCTATTATG
AGTAGTAGTGCGGGGTGGTGATGTTACCAATAATACGCAGAGGAGGGTTG
AAAGCCACACACCACACAGAGCACCCGAAAGTCTTCTGAAATTTAATCAG
GCCTCTATAGAAAACCACATTTGCAGAATGAATGATGATTGGCCAGGAGA
CGAGCCGTGGAGACACCTCTTTTGCTTATCACAGGATGGTGGTGCAGAAG
AAGCAGGAGGGGAGTATTGCGCGTGAGGGGCAGGTCATTTTTGGATGGGG
TACAGGCCTCCATCACTGAACAGTATTATGGTGTGAGATGCTGCGACGTA
TTTATGGCAGCCGGATGACTACGTACGACGAGAAGATCAATCATTCATCA
ACGGGGTGAGAGACTTTATTTTGACGAAGAAGAGGAGTCTACAAGCACTA
CACTCCCGACCCCGCAATTAATTAACCAACGGGGAGGGGGGGTCTGTTCG
AGATGACCCGGAGGCGGGTGCCGTAAATGAGGCCTATATACGCGGGGGGT
ATTTGGTGTACTTCATTTACTACAAGCTGCTTCGGTTGCGAGTTCACTCA
ACGATGGCCCAATTTTTATTGAAACTGCTGGGGATCGGTGCTAGGTGGTT
GGTGCCGGATGGATGTGGTGTGTGCGCCTACACTGACTGACAGAGTCACG
CGCAATATTAATTGGAAATGTTTGTTTCGTTTTTGTTTTCGGAGCATCAC
CACATCATACAACATTTATTTAGCAAGGTGCGCAGTAAATAGTCAAATAT
AAGCACACGCAGGTGTGGTACACGAGGAGGG
back to top

protein sequence of Ec-27_006890.1

>Ec-27_006890.1 ID=Ec-27_006890.1|Name=Ec-27_006890.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=472bp
MQGKTGMEARVRVHPQHPQQDKAAKHTFMVGLCLLCHRAASWVPAPVPSA
VSRPRYGRRPNVGAGGRMWLTASPVIDSPRIADMAWPAQMVVEPGDEISG
LPEEGNGQPAPTGTRTGPASSLENQEGRGQQGFEGPEKTLEIEFEPDVGH
EEGLRAIRREQWDAILEQAQCHILHQRGNDHFDSYVLSESSLFVYKSKLV
LKTCGTTTLLRCLPLLTVVSKNYGLNLEWIGYSRKNFTFPTDQTYPHTSF
AEEVDFLQGMFSGSAYVHGPLNSDHWYTYVADDCKKSTNAAADRTLNMMM
YDLEPEVAQNFYKTDKIQTGEDVSSRSGIKSVLPNAALQDHLFEPCGYSM
NALEGQAYYTVHVTPEPDFSYASFETNVRLPDYDALVRGVLEVFRPRKFT
MTLFGEDSGIEDIKQSPFDYSDIACGPTSASSTSARYERTLKTTTNFSGD
YFSQMGNWVREQSAAAAATPT*
back to top

mRNA from alignment at chr_27:6311623..6320611+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-27_006890.1 ID=Ec-27_006890.1|Name=Ec-27_006890.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=8989bp|location=Sequence derived from alignment at chr_27:6311623..6320611+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ACTGGTCATCGTCTCTCGTGCGGGGCCCCCTCGATTGCTCTAAGTAGCAA
CGTAGCAACGACACGTGGGCGTCCTGAGGCTGTGCTCGATTGCCTTCCGC
ACGCGCTGTGGGTAGCCTACGAGCAGTGACCAACCTCTTGGGATGCAGGG
GAAGACGGGCATGGAGGCCAGAGTAAGAGTACACCCTCAACATCCGCAAC
AGGACAAGGCAGCTAAGCATACGTTCATGGTCGGTCTCTGCCTCCTTTGT
CACCGTGCTGCGTCGTGGGTACCAGCGCCAGTGCCCTCTGCGGTCTCGAG
ACCACGGTATGGGCGCAGACCCAATGTTGGCGCCGGTGGCAGAATGTGGC
TAACTGCCTCTCCAGTCATTGATTCGGTGAGCGGCTTGGGTGCATGACAC
TGCCATTGACCTGCATTTCTACCTCATACGTGAGCAAGAGTCCTGCTGTA
GACTCATAAAACCAGCGGTGGAAATTTGCTGTAACCACACGTCGTGACGC
GGTACGTATTTAGTCTACATGAGAGCTGCGGAGCTTCGAGTAGGAATTGC
TTACTCCGTATCTTGGTGATGTGTAGCTCCTTGCTGCATGAACCAACGAA
ATGCTCCATGTCAACAAGGCACATCGCCATCGCTCTGCGGCTTTCCACGC
AAATACTTCGTGTATTTTTTTACCACCATGAAGAATTTGACTGCTGCTGC
GGACTGCTGTTACTTCAGTACTGCTCGAAACGTATGTAGGAATAGAGAAT
AGAGGACGACGTGGACTTCTACGACACATGAGTTACATGTACGAGACACA
GACGTGAGGTAGGTCGACAAACACACGCTCGTTCGAAGTTCAAAATTGTC
TTTTTTGACAACAGAACCGTTCTGCATATGCTACTCTGTCGGGTCTTTCC
GGCGGAGTACCACATTCGACACACACGCGCTCGCGCACGTGTACAAGTAG
TACATAACAAGGACAATGATTGCATGCATTTATGTAGGGTTATGCAGGAA
AACTACGCGCAACCCTGCGCGCCGAGGCACCTCTCGTTTGGGAACACACA
ACACAAACACATCTGCACGTTTTCATTGGTCAGCCGGTTTGCGCGACCGA
TGCTAAAAGTAAAGACACAACAAACGGCGTGCGGAAGCCGACGCCCGAGT
GTGCCTGCAAGTGCGTGATACTTCCACAACAACAAACCCTACGCACTGCT
GTTGTCTGACGGTTAACACGTTTCCGCTGCCTTAAACCGAGCACCTGTTC
TATTTTGCCAAGTCGATACTTGTCGTCATGTCACCAGGGAGCACTCGCCC
CTGAAAACGCGGAATATCTACCCCAGATGCCCCAGGTCCCATGCCTAGCA
ACGTGGGGCGATATGTTTTCTCTGTGTGCGGAAGTCCATATCCGGACGTT
TCGAATTTACCAGTACAGCACCGGTAGCTTTCGACCTTCAAAGGTGGCAC
GACGTCTGCACCAAACGCGCTGAGGCCAGTCTACAGTACTTGTACATGAT
GATGAGCAAGGACAAGTGCGGCATCATGGACCAACTCTCAACGTTTTTTA
TCTACAAGGACAACGTTGCGGATTGGAGCCCTCCCCGTTCTCTAACCCCC
GTTGAAGATGAAGCTCTCTAACCAGTTGGTAGTTAACTTTGCTCGGAGCT
CGGGTAGTCACGCGTCCCCTGGACGGTCAAAAGCTTCGATTACCCCATAC
CCCCGAGATCGACTCGCCTCTAAGGAATGATCTCTCCAAGACGCTGCTTT
AACTCTCCAATCCCGCCATTATTTTTCAGTCTAACGGAGTGTGCGGTCGC
TCGCGCCTTGTTCGGTACTGTGGAGTATACTATACCCCATCGGGGGTGGT
GTTCGTGGTTGCCAGCCTGCAAGCAACCGTCCTGATGCAACCACACACAC
TTGATACATCTCTGGCTCTCATTCGGCATGCACACAGAATGCGCGGTTTC
ACGCTTTGTGTACCCAACCTGCCGTCCACTCGCAAGCTGTGTCCTGGAAA
ATTCTGACTGTTGTCCGGCCTTCCCCTTCACCACCGTCACACTACGCCGC
ACCTCCGGGGTCCCCTCGCCCACCCGCTACTGCTTTTGATACCTCAGCCC
CGAATAGCAGACATGGCATGGCCTGCACAAATGGTGGTTGAACCAGGAGA
CGAGATCTCGGGTCTGCCTGAAGAGGGGAACGGCCAACCAGCACCAACGG
GCACCAGAACAGGACCGGCTTCTTCCCTGGAGAACCAGGAGGGCAGGGGG
CAGCAGGGGTTCGAGGGTCCCGAGAAGACTCTTGAGATCGAGTTCGAGCC
GGACGTTGGGCACGAGGAAGGTCTCAGGGCCATCAGGAGGGAGCAGTGGG
ATGCCATACTGGAGCAGGTGCGCGCTCTGCAGCTTCGTGTTGTTCTAGAC
GTGGGAGGTTGAGGTTGCCACCTTCGAGGGTACTCGGTTCCAAACCATCG
AGGATAGTAGGTGTTTTGAGAATTGAAACAGTCCAAACTTGAGACAAGGG
TTAACGATCTCCGTAGAACAGCGTGTGGTACGCCGGCGATATCTGTCATC
AACACATCGCTACCATCCTCGTCCTGTCTGTTGCGGTGAGACAATGTGAC
TTTGTGCCGTACGTCATCCGCATGTTGATACTCGACACCCAGTTCCCCAC
AGCAGCAGTATTCTACGAAAACTACATGTACCGCAGGTGACACAAGATAA
CACACCCCCTGGACCGATTTTCAAAGCTTGATTACTCCACGACGAAGAGG
ATGTATGAATCAAACGATATGTTATCGGAAAGCTCTCGACGAGACGGTTC
CAACGCCGCCATTTTCGCCAACCCCAATATTTCTGCCGTGGGGAAATCGA
GCGTTGAAAATCGCCTCAGGGGGTGTGATACCTTGTGTCACCTACCTCAT
GCATTTCACCCACGTGCAGATCCGGCCGCGCATACGAAGGCGCCCGCTGA
ACTTATTCACTCCCTCGAGCAAGTTATGGCTTAGTCCGAGTGTCCTCTTC
AGATCTCTGCTGTCTACGATTTATAATATTTTGAGTACATACGTGTGGTA
CATTTTGAGGTGGGGAACTTAGTGCCACAAGTGTTATGTATCTTCGTGAA
ATCGGTAAGTTTCTCCGGCTTTCGTCAATCGATAGTTATAACTCCACCGG
TTTTGAGGTTTGGAGCTCCAGTGAAGAGTACAAATGTCTCGGCGAGGGAG
GTCATTTTTTTTCTGCCCTCTTTGCCGTATTATTAGTGACTTTTCGAGCA
ACATTCTCATGTTCCCAGCATGCATCGTGATAGCACAATTTGACATGTCG
TCGTGTTTTGGGGTACAGGGAGGGCGTTTGGTCGACGCTGATATGCGTTT
ATCATACTAACTGCTCAGACTTTGCTGCTGCTGTGAGCACAGGCGCAGTG
CCACATCCTGCACCAGCGAGGAAACGACCACTTCGACTCGTACGTGCTGT
CGGAGAGCAGCCTCTTCGTTTACAAGAGCAAGCTCGTGCTCAAGACCTGT
GGCACCACCACCCTCCTAAGGTTGGTTGGTTGGTCGAGGGAGAACAGTAG
GCACCGGTCAAGAATTGCGAGGAAAAAATCTTTCTTCTTCGAGAAGTTTG
GTGGTGTCGTTTCGTTCTAGTTGTTGTGCATGCGATAGACTGCCGGAGGG
CTTGTTGCGCAAAGCCGTACGTGAAAGGAACTCCAGATGTCCCGTCAGCT
TTCGTAGTGCCATTCATCGCTGCGTGTGGTCGTGTCTTGCAAGACCCCAA
CGGCTCGAGTATGAGTTGGACATTCTTGTTTCGGTGGCGTGGCTCCTCCA
TCTAGGTCGTGTATTCCTGTTGCTTCACGGCGTTGCTCCTCCTTCTCCTT
GGCCTGCGATTTCTGGAAGAGATCCAAAACCGACTCCTAGTTTGATACTC
TATTCTAGGAGTTGGAAGCGTCGAATCTGGGCAACCTGGATTCAAGTAGC
CTCCCATGTGTCTTGACGAGCGAGGCAGATGCGACCTAGGACACGCTGCA
AGATGTTTTATTTGACGGCTGCCAGTCCTGCCGGGATGACGTGGGCCACA
CTGTACTCGCTTAGGACTCACTGTCCATGCGCGTACCGTATGTACCCACT
GTGTTTCAACTGCTCTCTACATCGATATTTTTTTCCGTTTCTCGTGTTTC
GTCCCATGGTTTTTCCTTCTTCAACACGTGCTGTTTTGACTGTTTCATGA
TTCTCTTCCACCGTTACCCCTCGCCCGTGCCGCTTATTTTCTTTGCGCGT
GTTGTGCTTCTTCTCGAATGCGACGTCACCCAGGTGTCTACCGCTACTGA
CGGTGGTATCGAAGAACTACGGGCTGAACCTGGAGTGGATAGGGTACTCG
AGGAAGAACTTCACGTTTCCAACGGATCAGGTGCGTTCCTACGCTTTCCA
ACGGATCCGCGTTGTGATCTTTTGTTGGTTATAGTGCTCCCGCTCGCCTG
CGGGAACGATGAGGTTACGGTTGGCTATGTTCCCATTGCACTGATTTTCT
TGGCATTGGGGGGGACTTGGGCCAAAAGGGGAATTTCGTCAACAGACACA
GAACTAGGTGGCTACGATTTGTGACTTCTCGTATCGTTGCCCTGGTGGTG
TTCGAGGAACTGTATTGAAGCGGCAGTTGTCGCCACCGTGTGGTGGCTGC
TGTGCTTGTGTAGTCGATCGGTTAAGTAATGACGAACGCACGCGTTGGCT
TTACCAGCTCCCAGGTATGCTATTATCGACCAATTGTTTTACTCGCAACC
CTCCCGTGCCTCTGTAATTGTCCCGTCCCGCTTAACTACCAATATACGTT
TTGTCCGCACGCGGACTGGTAGACCTACCCGCACACCTCATTCGCGGAAG
AGGTGGATTTCCTTCAGGGGATGTTCTCGGGCTCTGCCTACGTGCACGGG
CCTTTGAACAGCGACCACTGGTACACGTATGTGGCCGACGACTGCAAGAA
GTCAACCAATGCGGCTGCCGACAGGACCCTGAACATGATGATGTACGACC
TGGAGCCGGAGGTGGCTCAAAACTTCTACAAGACGGACAAAGTGGGTAGT
GGCCTGGCGTGCCGCTGCTGTTGTTGCCTTCGTTTTTTTTAGCTTTTTCT
GTCATCATGGAGACAGCGACGACCTTTTCTCGAAAACAGCCCTGCAAGGA
GACGTTTGATTCGCGGGCTTAACCTTGTCTTGTCTTGCCTTGACGTGACT
CGACAGATCCAAACCGGCGAAGACGTGTCGTCGCGATCAGGAATAAAGAG
CGTGCTGCCAAACGCAGCCTTGCAGGACCACCTGTTCGAGCCGTGCGGGT
ACAGCATGAACGCGCTCGAAGGCCAAGCTTACTACACCGTTCACGTGAGC
TCAGCAGTTGGTTGGGCGGGCGGGTTTTAGGGGCGGGGTGGCGGTCAACT
ACTGGTGTGTTGATGTTTACGTCAAGGCATGGAACAACCGTGGGACTCGA
TTGTTGCGGTATGTACGCGCATGTCTTATGTCGGGGTTCCGGGCGCCTGA
GCAAGTCAGCTAGTTACGCATTCGTTCAAGCATTGCGCGTACTTCGGCCG
CGGTCGTGAGGTGTATGATACCAGCAGTTGGTTTCGTTCGTTCGGTTGCG
ATATCTTGGTGCTGCTGCCGCATGTCGAGTCAAAACTGTGACTACGACAC
CATCATGTCGTCAAAGGGCGATGCTGTGAGGTAAACTGGTCATGGTTGTT
ATTTTCGTGTTCCTCGTGTGTTTTGCTCCACCTTTCTTGCCTGAGACCCT
TGGGTGTGGCGATGCTTTCGAAGAGACCAAACGTTTGCAATTTTGAAACC
AATCCCACGAGTCACCCCAATTTTGTAACTTGGAAGTGGACGGGTCAAGC
ACGACCACTTTGCGTCTCTGGTGGTGGTGTATTTCGTCATAATGAGACGG
GGAAAAGCTGCTGGAGGTCGACATGACTGAAGCGAGGTACAGTGTGAGGT
GCGCCCTCGCCGGCACCGCCGCTGCTAGCACCCACCCACCCTCCCGCCCG
TATGGTGTCTACCTGCCCGGACGCCTGGCTGACTTGTCCTGCTGCACCTC
GTGTCCACCTCGCGTCACCTCGCTCTCTGGGCTAGGACCTACCCTGACCA
AAACACCATGTACTTATTGTGACAATCAACGTTTCGAAGGTGACCCCTGA
GCCCGACTTCAGCTACGCCTCCTTCGAGACGAACGTGCGCTTGCCGGACT
ACGATGCCCTCGTGAGAGGGGTTTTGGAGGTGTTTCGACCAAGGAAGTTC
ACCATGACACTTTTCGGGGAAGATTCGGGGATAGAGGACATCAAACAGGT
ACACACGGTGGGGTCAGGGTCATAGCTCTAGGGCGTTGGTAGTGCACTGG
CTAAGGCTTGCAATCCTGGAGATAAGTCTCGTAGTAGCAAGGGATTCGGG
AGCGCTGTGTTACCGCCCATCCCACGCACCCATGTATCAATTTTCCCTGG
CGTCTCCCCCTTTCCTTTTCCTTCCCTCGCACTTTGGGATGGCAGAGTCC
GTTCGACTACTCGGATATCGCCTGCGGTCCCACAAGCGCTAGCTCCACCA
GCGCGCGCTACGAGCGAACGCTCAAGACGACCACCAACTTCTCTGGAGAC
TACTTTAGTCAGATGGGGAACTGGGTGAGGGAACAGTCGGCGGCGGCGGC
GGCGACGCCAACATGATCCCAGCCAGCTGTACGAGACCAGCCCGAGGTCT
TTGGCGCTGGTATGAGCACTTAACTCTGTAGCCGGTAGTGTAGTAGCCAC
CTGCGGTTGTCTTGGATGTCAGAGACGGACAGGGGGGAGCTTAACTCGCT
CCTGCCCTACAAGTACAAGGTAGGGATCCGAAGGGCGGTGCGATGATAAA
ATGTTAGTTTCCGTGTGGGCAGCTTCGAAAAAAGGTTACCCGAGCCTAAC
GGGGTTCCGATAGTTGATCCGACTGAAAGCCTTTCCCAAGCGGTGCTCCG
CATGCTTCAAAGTTGCGATGGCGTGAGGGGACGGATTTTTGTCGCATCCC
AGTGGTCCATTAGACCTTGATCGTCGTGTGCATGCGGTGAAGGGTGGCAA
TATAGCTTGGGGTATGTAGGTCCTGCAATCGGTACACTAGCATACCTTTA
GAGCCAACTGCCGTGCCTGTCTCAGTTTTGGGGGGGGAGAAAATCCCTCA
AGAAGGCGTGCCTGTGTGCGGGAGACACGCATAACCGTTGTTGCATACGC
ACAGGATGCTTGTACGCCCGGTAGTAGCGATGCCGAACGGCAGCAGTGCT
GGTGTTGATGTTTCAAGGGCGACTTCTCTTGAGGTAGAGGACGCTTGCGA
CTTCGTTGCTGATCACTTGCTGGCCTCTTGAGCCTGCTGGCGCAAGGCTG
GCTCTCTAGGGAAGGCGTCTGGTGCGTATCGCCACTCATCTCTCCGTCTT
TTTATGATAAGTGTCTGGCCGGGTGGTGTCATGCAGTAAGCAACCTTTGC
ATTCCCGAAAATTTTGCGCACCACGCGATTGCCTGTGTAAGGGTCGTCTG
TGTGTGTGTGTGTGTGTGTGCCTGTTACATTGTTTTGTTTTCCGTGTGCT
TTGTTGCTCTTTTCTTCTGTGGCTGGTGCCGAAGGATGATTTGGGAAGTA
ATTGCGGCTGGAGGTGTCGAGAGAAGTAAAGGACGCGGCACAAGCAGTCA
TTGTACAAAGACCTGGGTGACACCGGGTAGTTAGAAAAGCACTATAATAG
CGCGTTAGGTTGTCAGGCTGAGCTTCGGTGTCGACAACAATAGTAGTGTA
TCGGCCTTCTATGATCTAACGCGTTATGATAGCGCGTGCCTTGTCTCCGT
AGAGAAACTTGGATTTGTCCTCTTTGAGTTGACGTAGGTAGTTGGATGGT
CTAGGATGAGCTTTACGGTCTGCACCTGCGGTTGTCTCCTACGAGAGCCT
CCTCACGAACTGGCGAACTGGCCGTTCGTAATAATTTAGTGTGTTTCCGT
CGATGGGCCGGGTATGTCTGGCGTCGGTATGACCACAACACCTGGCGCTG
ACTATACGATAGGCAGTAGAGACGAAAGGAAAAGCATAAGGTAGGTGGTG
AAGGGCGTGTGATGTTGGTCCCCCTAAGGAGGTAGTAGCCCTCCACTGTC
TCATTGAACTCGGCGATACCTCCAGCATTGGCTTCCTTTTTTGTTCATGT
GTGCAAGTGCGTGGACATGTGCTACTTGTTCTTGCCGATTATCTCACAAT
CTATTATGAGTAGTAGTGCGGGGTGGTGATGTTACCAATAATACGCAGAG
GAGGGTTGAAAGCCACACACCACACAGAGCACCCGAAAGTCTTCTGAAAT
TTAATCAGGCCTCTATAGAAAACCACATTTGCAGAATGAATGATGATTGG
CCAGGAGACGAGCCGTGGAGACACCTCTTTTGCTTATCACAGGATGGTGG
TGCAGAAGAAGCAGGAGGGGAGTATTGCGCGTGAGGGGCAGGTCATTTTT
GGATGGGGTACAGGCCTCCATCACTGAACAGTATTATGGTGTGAGATGCT
GCGACGTATTTATGGCAGCCGGATGACTACGTACGACGAGAAGATCAATC
ATTCATCAACGGGGTGAGAGACTTTATTTTGACGAAGAAGAGGAGTCTAC
AAGCACTACACTCCCGACCCCGCAATTAATTAACCAACGGGGAGGGGGGG
TCTGTTCGAGATGACCCGGAGGCGGGTGCCGTAAATGAGGCCTATATACG
CGGGGGGTATTTGGTGTACTTCATTTACTACAAGCTGCTTCGGTTGCGAG
TTCACTCAACGATGGCCCAATTTTTATTGAAACTGCTGGGGATCGGTGCT
AGGTGGTTGGTGCCGGATGGATGTGGTGTGTGCGCCTACACTGACTGACA
GAGTCACGCGCAATATTAATTGGAAATGTTTGTTTCGTTTTTGTTTTCGG
AGCATCACCACATCATACAACATTTATTTAGCAAGGTGCGCAGTAAATAG
TCAAATATAAGCACACGCAGGTGTGGTACACGAGGAGGG
back to top

Coding sequence (CDS) from alignment at chr_27:6311623..6320611+

>Ec-27_006890.1 ID=Ec-27_006890.1|Name=Ec-27_006890.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1416bp|location=Sequence derived from alignment at chr_27:6311623..6320611+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCAGGGGAAGACGGGCATGGAGGCCAGAGTAAGAGTACACCCTCAACA
TCCGCAACAGGACAAGGCAGCTAAGCATACGTTCATGGTCGGTCTCTGCC
TCCTTTGTCACCGTGCTGCGTCGTGGGTACCAGCGCCAGTGCCCTCTGCG
GTCTCGAGACCACGGTATGGGCGCAGACCCAATGTTGGCGCCGGTGGCAG
AATGTGGCTAACTGCCTCTCCAGTCATTGATTCGCCCCGAATAGCAGACA
TGGCATGGCCTGCACAAATGGTGGTTGAACCAGGAGACGAGATCTCGGGT
CTGCCTGAAGAGGGGAACGGCCAACCAGCACCAACGGGCACCAGAACAGG
ACCGGCTTCTTCCCTGGAGAACCAGGAGGGCAGGGGGCAGCAGGGGTTCG
AGGGTCCCGAGAAGACTCTTGAGATCGAGTTCGAGCCGGACGTTGGGCAC
GAGGAAGGTCTCAGGGCCATCAGGAGGGAGCAGTGGGATGCCATACTGGA
GCAGGCGCAGTGCCACATCCTGCACCAGCGAGGAAACGACCACTTCGACT
CGTACGTGCTGTCGGAGAGCAGCCTCTTCGTTTACAAGAGCAAGCTCGTG
CTCAAGACCTGTGGCACCACCACCCTCCTAAGGTGTCTACCGCTACTGAC
GGTGGTATCGAAGAACTACGGGCTGAACCTGGAGTGGATAGGGTACTCGA
GGAAGAACTTCACGTTTCCAACGGATCAGACCTACCCGCACACCTCATTC
GCGGAAGAGGTGGATTTCCTTCAGGGGATGTTCTCGGGCTCTGCCTACGT
GCACGGGCCTTTGAACAGCGACCACTGGTACACGTATGTGGCCGACGACT
GCAAGAAGTCAACCAATGCGGCTGCCGACAGGACCCTGAACATGATGATG
TACGACCTGGAGCCGGAGGTGGCTCAAAACTTCTACAAGACGGACAAAAT
CCAAACCGGCGAAGACGTGTCGTCGCGATCAGGAATAAAGAGCGTGCTGC
CAAACGCAGCCTTGCAGGACCACCTGTTCGAGCCGTGCGGGTACAGCATG
AACGCGCTCGAAGGCCAAGCTTACTACACCGTTCACGTGACCCCTGAGCC
CGACTTCAGCTACGCCTCCTTCGAGACGAACGTGCGCTTGCCGGACTACG
ATGCCCTCGTGAGAGGGGTTTTGGAGGTGTTTCGACCAAGGAAGTTCACC
ATGACACTTTTCGGGGAAGATTCGGGGATAGAGGACATCAAACAGAGTCC
GTTCGACTACTCGGATATCGCCTGCGGTCCCACAAGCGCTAGCTCCACCA
GCGCGCGCTACGAGCGAACGCTCAAGACGACCACCAACTTCTCTGGAGAC
TACTTTAGTCAGATGGGGAACTGGGTGAGGGAACAGTCGGCGGCGGCGGC
GGCGACGCCAACATGA
back to top
Synonyms
The feature 'Ec-27_006890.1' has the following synonyms
Synonym
Esi0339_0011
Esi_0339_0011
SAMDC