Ec-27_004590.4 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-27_004590.4
Unique Name	Ec-27_004590.4
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	649

Homology

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BLAST of Ec-27_004590.4 vs. uniprot
Match: D8LBA9_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBA9_ECTSI)

HSP 1 Score: 964 bits (2493), Expect = 0.000e+0
Identity = 584/664 (87.95%), Postives = 584/664 (87.95%), Query Frame = 1

Query:  973 AGGITSKVSSSTAATAMAPQHVRSLGESRRDRPXXXXXXXXXXXXXXXAAASTALAVAHRDRAAHAACQPARGPLATSTVFGHYPACGHHADGGGIGWVDVRHTSGKGTGASSAARDVRRLGESRRNSPPPPSFSIAPPTALTAAASTAIAMAYRHQEELAAHAARQEAQDTQAAGTMKICGVGCGHNVEGDHVGWVNIRDVSGRGMGVSTAARYLRSLDESRQNRRSPLVSIAPPTALTAAASTALAVAYRDQLAAHAARQAARVPLAASTMNVFGHYPGGGHHGEGDDTSWVDIRDANGKGTGVSSAARRSYPSCSIVAASMAFAANQPFRAPPVASAAETAHHLVEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGHLSGKGSGSSGAVRFSSAAGSSTGGEMYATGSGRGGDGEKNSSTINDDGGSCSAKQSLPTSSTDAAGESAAAPPVAGSPRTAAGEGTDGKPAHLERAGTQAPKSGTRKPAQKRHPWGGKDWAGHPLSKKLQKHVKENDKAWRMQGGIMMGADGSHFFCSVCGYPGELTCCDECPRVFHLGCLRVRLNSQQAAAGQTTDETWHCPVCTEGRGNQSGRRGEPQLTYHFLRGSIGAFVLLLLSTPPVTFRSSRVCCARVLRSPSKTFRL 2964
            AGGITSKVSSSTAATAMAPQHVRSLGESRRDRPXXXXXXXXXXXXXXX AASTALAVAHRDRAAHAACQPARGPLATSTVFGHYPACGHHADGGGIGWVDVRHTSGKGTGASSAARDVRRLGESRRNSPPPPSFSIAPPTALTAAASTAIAMAYRHQEELAAHAARQEAQDTQAAGTMKICGVGCGHNVEGDHVGWVNIRDVSGRGMGVSTAARYLRSLDESRQNRRSPLVSIAPPTALTAAASTALAVAYRDQLAAHAARQAARVPLAASTMNVFGHYPGGGHHGEGDDTSWVDIRDANGKGTGVSSAARRSYPSCSIVAASMAFAANQPFRAPPVASAAETAHHLVEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GGHLSGKGS                                                                              GTDGKPAHLERAGTQAPKSGTRKPAQKRHPWGGKDWAGHPLSKKLQKHVKENDKAWRMQGGIMMGADGSHFFCSVCGYPGELTCCDECPRVFHLGCLRVRLNSQQAAAGQTTDETWHCPVCTEGRGNQSGRRGEPQLTYHFLRGSIGAFVLLLLSTPPVTFRSSRVCCARVLRSPSKTFRL
Sbjct:   47 AGGITSKVSSSTAATAMAPQHVRSLGESRRDRPXXXXXXXXXXXXXXXXAASTALAVAHRDRAAHAACQPARGPLATSTVFGHYPACGHHADGGGIGWVDVRHTSGKGTGASSAARDVRRLGESRRNSPPPPSFSIAPPTALTAAASTAIAMAYRHQEELAAHAARQEAQDTQAAGTMKICGVGCGHNVEGDHVGWVNIRDVSGRGMGVSTAARYLRSLDESRQNRRSPLVSIAPPTALTAAASTALAVAYRDQLAAHAARQAARVPLAASTMNVFGHYPGGGHHGEGDDTSWVDIRDANGKGTGVSSAARRSYPSCSIVAASMAFAANQPFRAPPVASAAETAHHLVEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGHLSGKGSXXXXXXXXXX---------------------------------------------------------XXXXXXXXXXXGTDGKPAHLERAGTQAPKSGTRKPAQKRHPWGGKDWAGHPLSKKLQKHVKENDKAWRMQGGIMMGADGSHFFCSVCGYPGELTCCDECPRVFHLGCLRVRLNSQQAAAGQTTDETWHCPVCTEGRGNQSGRRGEPQLTYHFLRGSIGAFVLLLLSTPPVTFRSSRVCCARVLRSPSKTFRL 653

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BLAST of Ec-27_004590.4 vs. uniprot
Match: A0A6H5KC71_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC71_9PHAE)

HSP 1 Score: 856 bits (2211), Expect = 1.410e-288
Identity = 469/600 (78.17%), Postives = 492/600 (82.00%), Query Frame = 1

Query: 1024 APQHVRSLGESRRDRPXXXXXXXXXXXXXXXAAASTALAVAHRDRAAHAACQPARGPLATSTVFGHYPACGHHADGGGIGWVDVRHTSGKGTGASSAARDVRRLGESRRNSPPPPSFSIAPPTALTAAASTAIAMAYRHQEELAAHAARQEAQDTQAAGTMKICGVGCGHNVEGDHVGWVNIRDVSGRGMGVSTAARYLRSLDESRQNRRSPLVSIAPPTALTAAASTALAVAYRDQLAAHAARQAARVPLAASTMNVFGHYPGGGHHGEGDDTSWVDIRDANGKGTGVSSAARRSYPSCSIVAASMAFAANQPFRAPPVASAAETAHHLVEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGHLSGKGSGSSGAVRFSSAAGSSTGGEMYATGSGRGGDGEKNSSTINDDGGSCSAKQSLPTSSTDAAGESAAAPPVAGSPRTAAGEGTDGKPAHLERAGTQAPKSGTRKPAQKRHPWGGKDWAGHPLSKKLQKHVKENDKAWRMQGGIMMGADGSHFFCSVCGYPGELTCCDECPRVFHLGCLRVRLNSQQAAAGQTTDETWHCPVCTEGRGNQSGRRGE 2823
            APQHVRSLGESRR+ PXXX            A ASTALAVAHRDRAAHAACQPARGPLATSTVFGHYPACGHHADGG +GWV +RHTSGKG  ASSAARDVR LGESRRNSPPPPSFSIAPPTALTAAASTAIAMA+RHQEELA+HAARQEAQD QAA  +K CGVGCGHN EGD +GWVNIRDVSGRGMGVS+AA+YLRSL ESR+ RRSPLVS APPTALTAAASTALAVAYRDQLAAHAARQAARVPLAASTMNVFGHYPGGG+HGEGD+ SWVDIRDA+GKGTG SS ARRS  S S+ A  +AFAANQ F APP ASA  TAHHL                                                GGGHLSGK SG SGA+R SSAA +STG EMYATGSGRGGDGEKNSSTIN D GSCSA QSLPTSS DAAGESAAAPPVAGS RTA G+ TDGK AHLERAG Q+PKSGTRKPA KRHPWGGKDWAGHP+SKKLQKHVKENDKAWRMQGGIMMGADGSHFFCSVCGYPGE+ CCDECPRVFH GCLRVRLNSQQAAAGQTT +TWHCPVCTEGRGNQSGRRG+
Sbjct:   64 APQHVRSLGESRRNTPXXXPFGITPPHALT-ATASTALAVAHRDRAAHAACQPARGPLATSTVFGHYPACGHHADGGDVGWVGIRHTSGKGKAASSAARDVRSLGESRRNSPPPPSFSIAPPTALTAAASTAIAMAFRHQEELASHAARQEAQDAQAAVNVKTCGVGCGHNAEGDEIGWVNIRDVSGRGMGVSSAAQYLRSLGESRRIRRSPLVSTAPPTALTAAASTALAVAYRDQLAAHAARQAARVPLAASTMNVFGHYPGGGYHGEGDNISWVDIRDADGKGTGGSSVARRSDLSFSMAAVPIAFAANQSFGAPPAASATVTAHHL------------------------------------------------GGGHLSGKASGPSGAIRLSSAARNSTGSEMYATGSGRGGDGEKNSSTINGDDGSCSATQSLPTSSIDAAGESAAAPPVAGSARTAEGKETDGKSAHLERAGAQSPKSGTRKPAHKRHPWGGKDWAGHPISKKLQKHVKENDKAWRMQGGIMMGADGSHFFCSVCGYPGEVICCDECPRVFHPGCLRVRLNSQQAAAGQTTADTWHCPVCTEGRGNQSGRRGK 614

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BLAST of Ec-27_004590.4 vs. uniprot
Match: A0A6H5JJY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJY6_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 1.450e-22
Identity = 51/98 (52.04%), Postives = 66/98 (67.35%), Query Frame = 1

Query: 2500 KRHPWGGKDWAGHPLSKKLQKHVKENDKAWRM-QGGIMMGADGSHFFCSVCGYPGELTCCDECPRVFHLGCLRVRLNSQQAAAGQTTDETWHCPVCTE 2790
            KR PWGGKDWAG P S+ ++  +      W + Q G ++G DG+HFFCS CG  G+LTCCDECPRVFH  CL +  +S  AA  QT ++ W+CP CT+
Sbjct:  740 KRSPWGGKDWAGKPASQAVKDDLLAEVSLWSVAQDGTLVGEDGNHFFCSACGESGDLTCCDECPRVFHEECLPIGTDSHLAANRQTEEDPWYCPSCTD 837

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BLAST of Ec-27_004590.4 vs. uniprot
Match: D7FHY8_ECTSI (Trithorax 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHY8_ECTSI)

HSP 1 Score: 115 bits (289), Expect = 7.450e-22
Identity = 57/118 (48.31%), Postives = 73/118 (61.86%), Query Frame = 1

Query: 2500 KRHPWGGKDWAGHPLSKKLQKHVKENDKAWRM-QGGIMMGADGSHFFCSVCGYPGELTCCDECPRVFHLGCLRVRLNSQQAAAGQTTDETWHCPVCTE-GRGNQSG----RRGEPQLT 2835
            KR PWGGKDWAG   S+ ++  +      W + Q G ++G DG+HFFCS CG  G+LTCCDECPRVFH  CL +  +S  AA  QT ++ W+CP CT+ GR N       R+ EP  T
Sbjct:  840 KRSPWGGKDWAGKAASQAVKDELLAEVSLWSIAQDGTLVGEDGNHFFCSACGESGDLTCCDECPRVFHEECLPIGTDSHLAANRQTEEDPWYCPSCTDAGRVNLIAGDLHRKKEPNWT 957

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BLAST of Ec-27_004590.4 vs. uniprot
Match: D7FI07_ECTSI (GF22528 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI07_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 5.540e-21
Identity = 55/116 (47.41%), Postives = 72/116 (62.07%), Query Frame = 1

Query: 2494 AQKRHPWGGKDWAGHPLSKKLQKHVKENDKAWRM-QGGIMMGADGSHFFCSVCGYPGELTCCDECPRVFHLGCLRVRLNSQQAAAGQTTDETWHCPVCTE-GRGNQSGRRGEPQLT 2835
            A+KR  WGGKDW G  +S+  +  +      W + Q G ++G DG+HFFCSVCG  G++TCCD+CPRVFH  CL +  +S  AA  QT  + W+CP CT+ GR N    R EP  T
Sbjct:  265 AKKRSAWGGKDWGGQAVSQGAKDEILAGVSLWSVSQDGTLVGEDGNHFFCSVCGESGDITCCDQCPRVFHEECLPIGTDSHLAAHHQTEKDPWYCPSCTDAGRVNLVAGR-EPDWT 379

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BLAST of Ec-27_004590.4 vs. uniprot
Match: A0A6H5L4S9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4S9_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 1.290e-20
Identity = 65/145 (44.83%), Postives = 83/145 (57.24%), Query Frame = 1

Query: 2431 GKPAHLERAGTQAP-KSGTRKP-AQKRHPWGGKDWAGHPLSKKLQKHVKENDKAWRM-QGGIMMGADGSHFFC------SVCGYPGELTCCDECPRVFHLGCLRVRLNSQQAAAGQTTDETWHCPVCTE-GRGNQSGRRGEPQLT 2835
            G  A + R G   P K+G  K  A+KR  WGGKDW G  +S++ +  +      W + Q G ++G DG+HFFC      SVCG  G++TCCDECPRVFH  CL +  NS  AA  QT  + W+CP CT+ GR N    R EP  T
Sbjct:  228 GATASVPRCGRAGPTKAGKGKGRAKKRSAWGGKDWGGQAVSQRAKDEILAGVSLWSVSQDGTLVGEDGNHFFCRWARDRSVCGESGDITCCDECPRVFHEECLPIGTNSHLAAHHQTEKDPWYCPSCTDAGRVNLVAGR-EPNWT 371

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BLAST of Ec-27_004590.4 vs. uniprot
Match: A0A1X2GIB6_9FUNG (PHD-type domain-containing protein n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GIB6_9FUNG)

HSP 1 Score: 58.2 bits (139), Expect = 9.910e-5
Identity = 22/55 (40.00%), Postives = 30/55 (54.55%), Query Frame = 1

Query: 2620 DGSHFFCSVCGYPGELTCCDECPRVFHLGCLRVRLNSQQAAAGQTTDETWHCPVC 2784
            D SH  C  C  PG++ CC+ CPRVFH  C+   L+S        ++E W+C  C
Sbjct:   79 DASHDICDACNAPGQVVCCEACPRVFHFNCVEPPLDSNDV----DSEEEWYCNAC 129

The following BLAST results are available for this feature:

BLAST of Ec-27_004590.4 vs. uniprot

BLAST of Ec-27_004590.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7


Match Name	E-value	Identity	Description
D8LBA9_ECTSI	0.000e+0	87.95	PHD-type domain-containing protein n=1 Tax=Ectocar...	[more]
A0A6H5KC71_9PHAE	1.410e-288	78.17	PHD-type domain-containing protein n=1 Tax=Ectocar...	[more]
A0A6H5JJY6_9PHAE	1.450e-22	52.04	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FHY8_ECTSI	7.450e-22	48.31	Trithorax 3 n=1 Tax=Ectocarpus siliculosus TaxID=2...	[more]
D7FI07_ECTSI	5.540e-21	47.41	GF22528 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
A0A6H5L4S9_9PHAE	1.290e-20	44.83	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A1X2GIB6_9FUNG	9.910e-5	40.00	PHD-type domain-containing protein n=1 Tax=Hesselt...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_27	contig	chr_27:4045528..4055672 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	117.1
Seed ortholog evalue	3.1e-23
Seed eggNOG ortholog	2880.D7FHY8
Length	6047
KEGG rclass	RC00003,RC00060,RC00181,RC00496
KEGG ko	ko:K02606,ko:K09186,ko:K09188,ko:K14964,ko:K17586,ko:K22197
KEGG Reaction	R03875,R03938,R04866,R04867
KEGG Pathway	ko00310,ko04110,ko04111,ko04113,ko04934,ko05202,ko05225,map00310,map04110,map04111,map04113,map04934,map05202,map05225
KEGG Module	M00284
Hectar predicted targeting category	other localisation
Gene id	Ec-27_004590.4
EggNOG free text desc.	mRNA processing
EggNOG OGs	COG2940@1,COG5141@1,KOG0825@1,KOG0825@2759,KOG0955@2759,KOG4443@2759
EC	2.1.1.43
COG Functional cat.	LO
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko00002,ko01000,ko01009,ko03000,ko03032,ko03036

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-27_004590	Ec-27_004590	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_27 4043685..4055672 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-27_004590.4	Ec-27_004590.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_27 4050297..4052597 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-27_004590.4.1	Ec-27_004590.4.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_27 4045528..4045813 +
Ec-27_004590.4.2	Ec-27_004590.4.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_27 4046150..4046265 +
Ec-27_004590.4.3	Ec-27_004590.4.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_27 4047964..4048063 +
Ec-27_004590.4.4	Ec-27_004590.4.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_27 4048942..4049395 +
Ec-27_004590.4.5	Ec-27_004590.4.5	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_27 4050228..4051918 +
Ec-27_004590.4.6	Ec-27_004590.4.6	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_27 4052273..4055672 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-27_004590	5UTR:Ec-27_004590.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	five_prime_UTR	chr_27 4045528..4045813 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-27_004590.4	CDS:Ec-27_004590.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_27 4050297..4051918 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-27_004590	3UTR:Ec-27_004590.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	three_prime_UTR	chr_27 4052598..4055672 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_27:4045528..4055672+
coding sequence from alignment at chr_27:4045528..4055672+

mRNA sequence

>Ec-27_004590.4 ID=Ec-27_004590.4|Name=Ec-27_004590.4|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=649bp
MAPQHVRSLGESRRDRPPPPPPFGIAPPPALTAAASTALAVAHRDRAAHA
ACQPARGPLATSTVFGHYPACGHHADGGGIGWVDVRHTSGKGTGASSAAR
DVRRLGESRRNSPPPPSFSIAPPTALTAAASTAIAMAYRHQEELAAHAAR
QEAQDTQAAGTMKICGVGCGHNVEGDHVGWVNIRDVSGRGMGVSTAARYL
RSLDESRQNRRSPLVSIAPPTALTAAASTALAVAYRDQLAAHAARQAARV
PLAASTMNVFGHYPGGGHHGEGDDTSWVDIRDANGKGTGVSSAARRSYPS
CSIVAASMAFAANQPFRAPPVASAAETAHHLVEKGAGGSSVARRSYPSFS
MAAVPVTFAANQSFGAPPAASAAVTAYHLGGGHLSGKGSGSSGAVRFSSA
AGSSTGGEMYATGSGRGGDGEKNSSTINDDGGSCSAKQSLPTSSTDAAGE
SAAAPPVAGSPRTAAGEGTDGKPAHLERAGTQAPKSGTRKPAQKRHPWGG
KDWAGHPLSKKLQKHVKENDKAWRMQGGIMMGADGSHFFCSVCGYPGELT
CCDECPRVFHLGCLRVRLNSQQAAAGQTTDETWHCPVCTEGRGNQSGRRG
EPQLTYHFLRGSIGAFVLLLLSTPPVTFRSSRVCCARVLRSPSKTFRL*

spliced messenger RNA

>Ec-27_004590.4 ID=Ec-27_004590.4|Name=Ec-27_004590.4|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=6047bp|location=Sequence derived from alignment at chr_27:4045528..4055672+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
GCTATTATGTACCATGGAGGATGGTTGCTGCTGCTGTAAGGTGCAATGAG
ACCAGCAGATAACCGGTGAAGGTTTCTCTCGTCTCTACAGTGCTCACAAC
ACGTATCACTGGCTGCTTCGATTCCATTTTCTCAAGATGATGTGCCACGC
ATAATCGCCCGCAGTTCCACAATCGGGCTCACGCGGCTCCTGCTGCCATC
GCAAGCTACAAGGTTGGGCGGATTCGTTCTGATCTACTTACACTGGTGCT
GTGGAAGAGAGCCAGTTTGACGGTGCTACCAACCAGTGGCTACCATCACA
CCAACAGAGAGGACTACAGTACACACCTTCTTGGGGTGCAGTGGCAGCAG
AAGGCAAGGGCAGACTTCTCTCCCACGGAGACAACTCCGCCACAAATCGA
AGTCTCTCAGGGCGCCGTGCAGTTCGCAACACCATTCCACGTCGCGATGT
CCAGCTCAACGAACAACGAGTCCATCCAAGACAATGGCCGAACCTTCAGC
AGTTGGGAGCGTGTGCCATGCAATTCCTCAGCGTGTCGTCCTCTCCTGCT
ACCAGGACCGCAACACCACCACTACCACTGGGTGGATCCTCGCACAGGAA
TGAGGTCCAGGCCATTCTGGGGGTGAGTCATACAACCCACACAAATGTTT
TCCGTTCTTTTGTGGCGTGCTGTGCCCGTCTGTGGAGCCCTCCCCGTGCT
CCTCACTCGTCTGCGATGAGCATATGCGCCCGAACCAACTGCTGTTGAGG
CGATCTCTTCTACGGAAGAGGAGATTGGTGACTGAGACGTGTTGAAGAAC
GCCACGCTTTCCTGGCCATGTCTTACTCGAGACTACGCTCGTCTGTGATG
AGGTCATCGAAGCCATGGGATCACTGGCGGCGGCGATGACCATGGTGGCG
GGGGAAAAGAAGAAGCCGAGGGGACGAAGAGCAGTACAAGAGCATCTCTG
GAGGAGGAGTTGTCTACCACGGAGACTGCTGGCGGGATCACGAGCAAGGT
CAGCTCCAGCACGGCCGCCACTGCCATGGCACCTCAACACGTCCGCAGCC
TCGGCGAGAGCCGTCGGGACAGACCGCCGCCGCCGCCACCATTTGGGATT
GCACCGCCCCCCGCCCTGACCGCCGCCGCTTCCACGGCTCTCGCCGTGGC
GCACCGAGACCGAGCCGCACACGCCGCATGCCAGCCAGCGCGAGGCCCCC
TGGCGACGAGTACGGTGTTTGGGCACTATCCCGCTTGTGGACACCATGCA
GACGGTGGTGGCATTGGCTGGGTGGACGTCAGGCACACCAGCGGCAAGGG
CACGGGTGCCTCTAGTGCCGCTCGAGACGTCCGTAGGCTCGGCGAGAGCC
GCCGGAACAGCCCACCGCCGCCGTCGTTTAGTATTGCACCGCCAACCGCC
CTGACAGCCGCCGCTTCCACGGCTATTGCCATGGCATACCGACACCAAGA
AGAACTGGCCGCACACGCCGCACGCCAGGAAGCGCAAGACACCCAGGCGG
CAGGCACCATGAAAATCTGTGGGGTAGGTTGTGGACACAATGTCGAGGGT
GATCATGTTGGCTGGGTGAATATCAGAGACGTCAGTGGCCGGGGCATGGG
TGTCTCTACTGCCGCTCGGTACCTCCGCAGCCTCGACGAGAGCCGCCAGA
ACAGGCGGTCACCGTTGGTTAGTATTGCACCGCCCACTGCCCTGACGGCC
GCCGCTTCCACGGCTCTAGCCGTGGCATACCGAGACCAACTGGCTGCACA
CGCCGCACGCCAGGCAGCGCGAGTCCCCCTGGCGGCAAGCACCATGAACG
TGTTTGGGCACTACCCTGGTGGTGGACACCATGGCGAGGGTGACGACACT
AGCTGGGTGGATATCAGAGACGCCAACGGCAAGGGCACGGGTGTCTCTAG
TGCCGCCAGGCGCTCTTACCCCTCGTGCTCGATCGTTGCGGCTTCCATGG
CTTTCGCGGCAAACCAGCCTTTCAGAGCTCCTCCGGTGGCTAGCGCCGCG
GAGACCGCGCACCACCTCGTCGAGAAGGGCGCGGGTGGCTCTAGTGTCGC
CAGGCGCTCTTACCCCTCATTCTCGATGGCCGCCGTTCCCGTGACTTTCG
CGGCGAACCAGTCTTTCGGAGCTCCTCCGGCGGCTAGCGCCGCGGTGACC
GCGTACCACCTCGGCGGTGGACACCTTTCTGGCAAGGGTTCAGGTTCCTC
CGGTGCGGTCAGATTCTCTTCTGCGGCAGGTAGCAGCACCGGCGGCGAGA
TGTACGCGACCGGCAGCGGCCGTGGTGGTGACGGCGAAAAAAACAGCAGC
ACCATCAACGACGATGGTGGTAGTTGCAGTGCCAAGCAATCTCTACCCAC
CTCCTCGACCGACGCCGCCGGAGAGTCTGCTGCTGCTCCTCCTGTCGCTG
GTAGTCCCCGTACAGCAGCAGGTGAAGGGACGGATGGAAAGCCGGCACAC
CTGGAAAGAGCGGGGACCCAAGCCCCGAAAAGCGGCACGAGGAAACCGGC
GCAGAAGCGGCACCCCTGGGGCGGGAAAGACTGGGCAGGCCACCCTTTAT
CCAAAAAGCTCCAGAAACACGTCAAGGAGAACGACAAGGCGTGGAGGATG
CAAGGCGGAATCATGATGGGAGCTGACGGCAGCCATTTCTTTTGCAGTGT
CTGCGGATATCCGGGTGAACTCACATGCTGCGACGAGTGCCCCCGTGTCT
TCCACCTGGGGTGTCTGCGCGTCAGGCTGAATAGCCAGCAAGCCGCCGCC
GGCCAAACCACAGATGAGACGTGGCACTGCCCCGTGTGTACCGAGGGCCG
GGGCAACCAATCTGGTCGTCGGGGTGAGCCTCAATTGACCTACCATTTTC
TGCGCGGAAGTATTGGTGCATTTGTTCTCCTCCTGCTGTCAACACCCCCG
GTAACTTTCAGATCTAGCAGAGTATGCTGTGCACGTGTATTGCGGAGCCC
CTCCAAGACGTTCCGTCTTTAGGCAAAGAGATGATGGGATCGGGATTTCC
TGTACTACTGTCACACACCGCCGTGGATGTACACTACTTCGAGTTAATTT
CGAGAGGCAGCCGTTCGTGAGCTGTGTGGAAACGAAAAGTTGGGTGCATT
AGTGTTGTAGGCGTTGCGGGGTAAGACCGCGTTTTGTCGGGGATGGCGAA
ACTCGCCCACAGACTAAAGCAGAAACCGAGGCGGCACAGATATAAACACA
TGTACGGGGTCATGCCACCCTGAAATGAAACAAGCCTCGACTCAAAAACC
CCGAGGCAACGCTATGTGGCACACCGCGTTGGACACTGCCGCGTCAGCTC
GACACCAAGGTAGGTCACGCTTCCGTGGGAACGCTACCGGTAGGATTTTG
CGTCCGAGGCCTCCACATCACCGTGACCGTCCTTGCACGAAGAAAAGAAA
CACAGTGAGGGCGAGCAAGCAGCGTCCGACGCTTAACCGTGAACTAGATA
TCTATGCTGTGCTAATTGTGGTTGAGGGAGCTTCCATAAGTTGATGTAGA
GCGCACTTGCCACACGGGAAAATAATGTCGCACATGTGGCGGTTTTTAAG
AGGAAGGTGCTAATGTTATGACCTCGGCAGTACATGGGGTCGCTGCACTC
AGTTCGGTTGATCGCCGTGCCCGAAAGAATCTGCTGCGTATCGCTAGCTG
TTTTGCTCAACACGCAGTTCTTGCACGTGCCTGCCACCCCTTGGCATGTT
GCGAACATGCTTCGTCCTCCTTGATGGTTCACAAGCACACGCACACATTT
TTTTCCCCGCAGGTAAGCATCGGCAAGGAGCACGCGCGTGACAAGCACGT
GTGATTCTCCTCTATAGGGAGCATGCCGGTGGGCAAGGAGTTGCTTTACT
CGTACCTTCCGCCTGTCGCCGTCGGTCTACAAGAGACGATAGCGGTGAAA
TGTGCTTGCCGGGAGCCAAGGGGCCTTGCGCGGGCTACACACAGCGGGCA
CAAGGGTCAACTGTAGAACGTGCGTTCTTATCATTCTTATCAAGTGCTCT
TTCATCATGAAATGTGGCCCTCTTGCATGGTTTGGCGCGCCCTGAAACAG
TGGTGGGAGACACTGTTTGGCAGACTTGAAAAAAAAGGGGAAAAAATAAC
AGAAAGTTGATGTTGCAGGGCAGCGATCCCACCGGAGATTTTACTGCACT
GTTGTGTGTCTGCTTGGGTCATCTCTGGACGTGAAACACCCAAATAATGG
GTTGTCAGGGAGAGATCGGCTGGGTAGTTTTGAGCCAAGCGGCAGAAACT
TGAAAAGTAATTGTACGTTTGTCCATTGCACCGTGCGTTGGTAAGACACG
GACAAGAACGGGGCCCGGTACCCCACCATGGTCGAGTCAGAGAAGATTGC
AGCTTGAAAACTTTTTGAGGTGTAGTTCGACACCAGCAGAGGTTGTTGGG
GTTCATCACGTTGGTGTGATGGAGTGTTAGGACGGGGGTGTGAGTGATCC
TGCCTGAAGACCGAAGCGCAGCTATGTAACACGGAGGACAATCTTACTCG
TTGTCGTACGGAAGAACGAGGATCAGTCTCGCCTTGTAATGTTGGCGGTG
CACTTGGCACATCTTGAGCTTGAGCGGCTTACGGTGTATCAACGCCCATG
GCACCTCGGTATGTGTCTGTATGGCGTACCGTAAGCTGTCTTATGCCTTC
GTATCGGAAGTACCCTTAACCGCTCAAGCGAGCTGAGTGACGGGGACGGA
GAGGGAGCGAGCACGGTAATCCGTAGTACGTTAGAACATGTTGGGATATG
ATGGTCTCACGTGCTGATTGTCATTGTTTGTGAGGTAGTGATGCTGTCCA
TGAGTGTTCGGATTTGAACCGGTAGTTACAGATTAATACGCAAGTGCACG
GTTCAGGGTCGGCGCCGAGAGCTCGGAAAGACTGAAGGATGAGAGTGCAA
TTAAATGCCAGTTGCTCTGTGGACTTGTTGTGGATCCGTCCTGCTTACCC
TTGACCCTTCCGGAATGAGCCGCGAATGACAGGCGTGGGGGGCGGTGGCA
GCGAGACATGAATTTATGGGGCGGGAGAGGGGGGATGAGAGAAGTGTGGC
GAAAGTAGGGTGTGAATTACGATGTTGACTACTTCTTCTCAGCGAAAACC
ACCTGCGTCGCACCGGTGGCTGTCCACTGTCAACACGTCATAGTACTCAG
GGTCTATGGGAAGGGAAGGGCGGCAAGCCAACTATCCTCCGGGTGTGAAA
GGAAGTAGGGGATGAATAGGTCTGCGGTGTCGTGCGGGACTATGCGGATC
ACTGTGCCCTGCTTGATAGATAGACTATGGCTTTTATTGTCACTGTGCCC
TGCTTGATAGATAGACTCTGGCTTTTATTGTGGGTTCTAGCATGGGGTGT
GCCGCGCAGAAACTTAATCGCGATGCTGGTGGCGGTTGTGGTGTTGTACA
GCCACACAGAAACGCAATCGTTTGCAAATGCCGTTTCTGTTGAAAGGGGG
GCAGGCAGATGGTACCTTTCGCAACGGCTTGTGCCCAACCGTGGGAAACA
TGTGCAAGGCGTACACGAGGAGACCACGAAAGAAAATTGCAATCAACGTC
GAGTCGGTAGCGTTCATCACACAAAAAATCTTGAAATGCAAGCACGATCG
ATCGCGATAATCTTGGCGCATAGCCGCCAAAAGGCCACGACATCACCACA
CACCATGCATGCTTACTTGCTTGCTGTTGATATTGCAGATCTCGCTCCAC
ATACCTACAGTTCTTTGTTCTTTAGACAAAAACACATTACATTGTGTCTA
CAAGAAGAGATTGATTGGGCACCATTAATTTGACATACGTACACACACGC
TTAGAGAGGATTCAGTATCACACAATACAAGTCGGATCAAGGCATATGAT
AAAGAGTGATCCGGGGCACTACGCCATGCTCGCTGCGGCGGTGGGAACCA
GCTACACATTGCTCCTATACTAAAACCGTTCTGAGAGAGTCTTCACGTCC
AAGAACAGGCGGTTCTCCAAACGATGGCCCCTCCCTGCTGTTTAGGCGGC
CGGTGCTACGTTTTTCACAATTTATCCCGTCGCGGGCTCGGTCCAGC

protein sequence of Ec-27_004590.4

>Ec-27_004590.4 ID=Ec-27_004590.4|Name=Ec-27_004590.4|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=649bp
MAPQHVRSLGESRRDRPPPPPPFGIAPPPALTAAASTALAVAHRDRAAHA
ACQPARGPLATSTVFGHYPACGHHADGGGIGWVDVRHTSGKGTGASSAAR
DVRRLGESRRNSPPPPSFSIAPPTALTAAASTAIAMAYRHQEELAAHAAR
QEAQDTQAAGTMKICGVGCGHNVEGDHVGWVNIRDVSGRGMGVSTAARYL
RSLDESRQNRRSPLVSIAPPTALTAAASTALAVAYRDQLAAHAARQAARV
PLAASTMNVFGHYPGGGHHGEGDDTSWVDIRDANGKGTGVSSAARRSYPS
CSIVAASMAFAANQPFRAPPVASAAETAHHLVEKGAGGSSVARRSYPSFS
MAAVPVTFAANQSFGAPPAASAAVTAYHLGGGHLSGKGSGSSGAVRFSSA
AGSSTGGEMYATGSGRGGDGEKNSSTINDDGGSCSAKQSLPTSSTDAAGE
SAAAPPVAGSPRTAAGEGTDGKPAHLERAGTQAPKSGTRKPAQKRHPWGG
KDWAGHPLSKKLQKHVKENDKAWRMQGGIMMGADGSHFFCSVCGYPGELT
CCDECPRVFHLGCLRVRLNSQQAAAGQTTDETWHCPVCTEGRGNQSGRRG
EPQLTYHFLRGSIGAFVLLLLSTPPVTFRSSRVCCARVLRSPSKTFRL*

mRNA from alignment at chr_27:4045528..4055672+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-27_004590.4 ID=Ec-27_004590.4|Name=Ec-27_004590.4|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=10145bp|location=Sequence derived from alignment at chr_27:4045528..4055672+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
GCTATTATGTACCATGGAGGATGGTTGCTGCTGCTGTAAGGTGCAATGAG
ACCAGCAGATAACCGGTGAAGGTTTCTCTCGTCTCTACAGTGCTCACAAC
ACGTATCACTGGCTGCTTCGATTCCATTTTCTCAAGATGATGTGCCACGC
ATAATCGCCCGCAGTTCCACAATCGGGCTCACGCGGCTCCTGCTGCCATC
GCAAGCTACAAGGTTGGGCGGATTCGTTCTGATCTACTTACACTGGTGCT
GTGGAAGAGAGCCAGTTTGACGGTGCTACCAACCAGGTACGGAGAAGTGA
GGTGTCTTCTTGGTACATACACACGACTTAACGGGAGCAGCGTGTACACT
ACACACCACGGTCGGTCGTGTCATGTGCAGTAGCAGACACGCTCCTTTAC
TGGGTGTGTGCTCTATCCTGCCGACAGAGTAGAGAGATTTCGCAAATCGT
TTTGGACGGATATCAGAGGCAGAGAAAGAGCGAAAGAACAGGGGGAAGAT
CATTTTTTTTTTTTTCATACGGGTAAGTGACATCTCCATTCCCGAGCGTC
CCGCCGCGTCTCCCCCGGTTCCCACTTCCCACTTCATACACCGTTCTCTC
TCCGTTTCCTCGTGCACAGCAGTGGCTACCATCACACCAACAGAGAGGAC
TACAGTACACACCTTCTTGGGGTGCAGTGGCAGCAGAAGGCAAGGGCAGA
CTTCTCTCCCACGGAGACAACTCCGCCACAAATCGAAGGTGAAAAGGTGC
AAAGATAGATCCGCGTGGTGGATGATGGTTGCGAGTTGTTGGTGGTATCT
AATAACCACCGGATCCAACAGCCAGGCCTGGAGACAGACAGAAGACAGAG
AGGCAGAGAGACAAGGCTAGGCTCGGCCTTTCATCTGCACTGGGTCATAG
CATGGTGTATTCCCAGTTGCAGGCTTTGACTGGAACATGAACGTGTTTGG
GTTCTGTATCCTAAGGGTTTCTTTTTGCTTTTCCAGAGTTCGAGGGAGGG
TACAAGCGGCAGAGAGAAAGAGAGAGAGATAGAGAGAGAGAGCACGTATG
TCGCTGAACTCTTTCGCACTCTAACCTCCTTGGGTGGCAAGGGCTGGGGT
TTCCCTGACACAGTTGGTAACTACCTTGATCATACCTGCAAGATATCCAA
AAGATATATCGGAGACCGTCCGTTACACGTATTCTGGTACTAGCCTTATT
AGACTACAGACACCTCTTGTGGAAAACACTTTCTTTCATCGCTTTAAATC
AGCGCTCACACACAGCATCTCTACTACATACATACAATCACTCGAAGATT
GCAAAGAATTCTCACTGAGAGAAGAGAGATGGAAAACATTTTGTGCACCG
CTGTTCAAGGAGTGCAGGAGAAATCCCTCCTGACTGAGGAAGGTCAATGC
TCGGACCTACTGCTTGATTGACTGTTCCTCGGGTTTGATTTCGATTAACA
CTTCGTTTATTCCCGCTGGGTTGATGTCAACAACTTGACCTACTGTTGGT
CCGTAGCATGATTTGCACGAGGTTGCGGGGGGTTGAATATATTTTCGAGG
TAAAGGTAAATTATACTTCAAGTACAATATACTGTACCTGCAGGCTAGTG
CGTCCGTTTTGAGGTCTGGAGGGGCGACGGTGATTCACAAGGGGGGTGGT
CGTCAGCCAATAATAAAGCTCGCCCTGCCCTCGACTCTTTTTGTATACAC
CAAGTGCAAAGGCGTGTGATAGGTGTCGAGACTAGCAGGGCAGGCACAGG
TCGCACACTAGACCCTCACACCCAAGTGTAGAGAGGTGTACAGCAGTACA
TACATCTCAATGTTGGTGGGTAGCAGCATAGGGGGGGGAGGCCTCTCGCT
CTTGTCTCTGCTCACAAAAATATGTTATCTATCAATGTTTGGGCTGCCTG
ATACTACAGTGCATTGGTCTCAAGGGGCACTACCTCAAACACTCAGCATA
ACTATCTCAACCGGGGTCCAGGTGATTGCATTCTCCGTTGTGCATATTGT
ACCGGGAAGACACAGAAGTGCCTACATTGAATGTGGTTCCTTGTGTGTGG
ATCCCTCTCACCTCGCCTAATGCTGTACAGTATGGTAGGTTGTGGTTCCC
TCTCGCAAGGCCATTGCTGAATTACAAGAGTTTACTTTGAAGCCAAGGTT
TGTTTACAGAGGTGTCCGCTGCGTCGGCGAGTATATTTTATCAATCCATG
CCGTTCTAAAATTAAACCTGAAACAGGAACCAACAAGAAATTAGGAAGGT
AGAGGCGGATGAGCAGGCCTTGAGTTGGACTATGATGAGACACATCGGCC
TCCCGTATATCTACAGAGAGAAGTGTTGTTTTTCGATTGAAGATATGGAC
AACTTTCGAACCCGACAGAAGCAAGCACCCCCAAGTTTGCCTCCCATCGC
CGATTCCCTGTCCCTTGTTCGTCACTTTGCTGTCAGTCTCTCAGGGCGCC
GTGCAGTTCGCAACACCATTCCACGTCGCGATGTCCAGCTCAACGAACAA
CGAGTCCATCCAAGACAATGGCCGAACCTTCAGCAGGCAAGGGCGTAACC
TAGATAGTTCGACCCAAGATTGTTTGTCTACCGCAGTGTGCAGGGCGTGC
CACCTCCATCGTCAGAAGGCCTCATCTACTGCGAGACCAGTGCAACATTA
CAAAAAGACAGACGTTGAATAGCATCCGACCTCGCGGCGGGTTTCTTCAC
GGTGTCTTTGTCGTTCACCCAACGGAGACCTGCAGGAGATGCTACAAGGT
ACAACATGCCTGCCTAGGCGTTTTTGTGCCGGCTGGCATGGCTCATCTCT
CAGTGTATAGGCTCAAACAAACTCAGATAAGTCGAGCATGCGGCAGATTC
TTCTCAACACTGTTGAAATGACTTTGACGCACCCCGGAAACTTCTCGAAC
AGTTTGTGTTTCTGTGGCTAAATTAATACGTCTATTTTGGAAAACCGTTC
TTTCTGTCGGACCTCACTCTTGTGTTACATTGAGACCGCCGTACGCATAC
AGAACATATTTGTCACTAGTTCCCATCTGTCAGACCAGTTAAGTTCCGTG
GAAACGAGGTGTTGCCCCGTTCTATGTTCTGGGTGCTAACTCCCCTCTTG
CGCTACACGAAATTTTTCGTTCTCTTCCGGGGCATGCTACGCCTGCCCGG
GCTTCTGTTTCCAAACATTTAATACGAAATGTTCGCAATACGAAACATTT
GGTGTATGCCACTAAATGTTGAAACTGAGTTTAACGCTTTGTTGGGCTGC
CTGTTGTTTGAAGACGGCGGTCCTGGTAGATCGCAACGTTTTGGGGAATT
TTGTGTTGGAATTTTGTGTTTTACCTGAGTGCGAATTCTCGAACCAGCGG
TGACCCTTGCCCCATCCCCTTCCCTCAACCCCCGTCGTGCTGCACGGTGA
TTGGGTTTGTCCAGTTGGGAGCGTGTGCCATGCAATTCCTCAGCGTGTCG
TCCTCTCCTGCTACCAGGACCGCAACACCACCACTACCACTGGGTGGATC
CTCGCACAGGAATGAGGTCCAGGCCATTCTGGGGGTGAGTCATACAACCC
ACACAAATGTTTTCCGTTCTTTTGTGGCGTGCTGTGCCCGTCTGTGGAGC
CCTCCCCGTGCTCCTCACTCGTCTGCGATGAGCATATGCGCCCGAACCAA
CTGCTGTTGAGGCGATCTCTTCTACGGAAGAGGAGATTGGTGACTGAGAC
GTGTTGAAGAACGCCACGCTTTCCTGGCCATGTCTTACTCGAGACTACGC
TCGTCTGTGATGAGGTCATCGAAGCCATGGGATCACTGGCGGCGGCGATG
ACCATGGTGGCGGGGGAAAAGAAGAAGCCGAGGGGACGAAGAGCAGTACA
AGAGCATCTCTGGAGGAGGTAAGATTGGTACACATGTAGCGGTGTTCAAT
GCGCATCGGTCATGTGCTGTGCTGCATCCGAAACGACAGAGCGCTAGATG
CATAGCGAAAACCCTGCAGCAATTTCCCGACTATTTATATAGTCTATAGG
TGAAACCAATTGGTTGACGGAAAAGTTTTGAAATCACCACAGGCAGCGAT
TTTTTCTCTCGAGGATGCAGTGAGTGCCGAATACAATCTTAATATTTCGT
TTAATAATGTTCGTTAACGAATATTTCACTATTTCTCTCGTGTGCAGGGG
ATAAAAGTAGCGCGAGCTTCCAATGGTTTACACGCGAATCCAATGTAATG
TAGACAGCTTCCTCCAGAAATATGCCAATGGTAGACCGTCGGTAACCTCG
CTTTCAGGTTGACTCACCTGCACAAATAGAGCAGGCTTGGCTTCCGAGAG
CCTACAGAACTCCAACTCTTCCTCGTTCTCTTTAGAGGATCTGGTGCAAG
TTGAAGGAATGGACCGAAATTTCTTTGAGAGAAGATATGTAGCACAATGT
TACCCAGTTTGTTTGTTTGTTTTGTCCTATTTTTAGTCGTCTATCTGAAA
GTGGCAGTTCTAGCACTCGAGCAACAATGGTACGGGCGCTTAGCTGTTGG
TATATTGTGTGCGATCCAGGAGCCATTGCAACATTGTACGATCACTGTCA
TTTGTTGTTCAACAATCACCCCGTTGTGTTGCTGAAAGCGCTACTGTACG
CGTATAAATGTGTTGGGTTTCTCTCTACTGCGTTGTGTAGATCCGGCTCC
TGATCTTTCCCCCTTCCCTGTGATTGTCTCACCCACCCACGTGTGCCTAG
GAGTTGTCTACCACGGAGACTGCTGGCGGGATCACGAGCAAGGTCAGCTC
CAGCACGGCCGCCACTGCCATGGCACCTCAACACGTCCGCAGCCTCGGCG
AGAGCCGTCGGGACAGACCGCCGCCGCCGCCACCATTTGGGATTGCACCG
CCCCCCGCCCTGACCGCCGCCGCTTCCACGGCTCTCGCCGTGGCGCACCG
AGACCGAGCCGCACACGCCGCATGCCAGCCAGCGCGAGGCCCCCTGGCGA
CGAGTACGGTGTTTGGGCACTATCCCGCTTGTGGACACCATGCAGACGGT
GGTGGCATTGGCTGGGTGGACGTCAGGCACACCAGCGGCAAGGGCACGGG
TGCCTCTAGTGCCGCTCGAGACGTCCGTAGGCTCGGCGAGAGCCGCCGGA
ACAGCCCACCGCCGCCGTCGTTTAGTATTGCACCGCCAACCGCCCTGACA
GCCGCCGCTTCCACGGCTATTGCCATGGCATACCGACACCAAGAAGAACT
GGCCGCACACGCCGCACGCCAGGAAGCGCAAGACACCCAGGCGGCAGGCA
CCATGAAAATCTGTGGGGTAGGTTGTGGACACAATGTCGAGGGTGATCAT
GTTGGCTGGGTGAATATCAGAGACGTCAGTGGCCGGGGCATGGGTGTCTC
TACTGCCGCTCGGTACCTCCGCAGCCTCGACGAGAGCCGCCAGAACAGGC
GGTCACCGTTGGTTAGTATTGCACCGCCCACTGCCCTGACGGCCGCCGCT
TCCACGGCTCTAGCCGTGGCATACCGAGACCAACTGGCTGCACACGCCGC
ACGCCAGGCAGCGCGAGTCCCCCTGGCGGCAAGCACCATGAACGTGTTTG
GGCACTACCCTGGTGGTGGACACCATGGCGAGGGTGACGACACTAGCTGG
GTGGATATCAGAGACGCCAACGGCAAGGGCACGGGTGTCTCTAGTGCCGC
CAGGCGCTCTTACCCCTCGTGCTCGATCGTTGCGGCTTCCATGGCTTTCG
CGGCAAACCAGCCTTTCAGAGCTCCTCCGGTGGCTAGCGCCGCGGAGACC
GCGCACCACCTCGTCGAGAAGGGCGCGGGTGGCTCTAGTGTCGCCAGGCG
CTCTTACCCCTCATTCTCGATGGCCGCCGTTCCCGTGACTTTCGCGGCGA
ACCAGTCTTTCGGAGCTCCTCCGGCGGCTAGCGCCGCGGTGACCGCGTAC
CACCTCGGCGGTGGACACCTTTCTGGCAAGGGTTCAGGTTCCTCCGGTGC
GGTCAGATTCTCTTCTGCGGCAGGTAGCAGCACCGGCGGCGAGATGTACG
CGACCGGCAGCGGCCGTGGTGGTGACGGCGAAAAAAACAGCAGCACCATC
AACGACGATGGTGGTAGTTGCAGTGCCAAGCAATCTCTACCCACCTCCTC
GACCGACGCCGCCGGAGAGTCTGCTGCTGCTCCTCCTGTCGCTGGTAGTC
CCCGTACAGCAGCAGGTGAAGGGACGGATGGAAAGCCGGCACACCTGGAA
AGAGCGGGGACCCAAGCCCCGAAAAGCGGCACGAGGAAACCGGCGCAGAA
GCGGCACCCCTGGGGCGGGAAAGACTGGGCAGGCCACCCTTTATCCAAAA
AGCTCCAGAAACACGTCAAGGAGAACGACAAGGCGTGGAGGATGCAAGGC
GGAATCATGATGGGAGCTGACGGCAGCCATTTCTTTTGCAGGTGAGGATA
CCCGGGGAAAGACAGGGGGAGAAGGGGACAACGTGGTGCATTTTTCTTGT
CTTTCGAACGTACCTATGTATGGCGTTTCTTGTAGTACAGAGTGCATTGA
CCACATGTCGAACATGCTACTGTGAATCAACGGATTGCTGACGTTGTTGC
CTCTCATCGGCAGTCGTCCGTCAGTCGTCCGTCAGTCGTCCAGGCGTTTG
TTTGTCGATTGCTCTCGGCATTTGTTTTTAGTCATACTGCTGTTGCTGTT
ATTTCTGGGTTTTAGCTGTTGACGTTGTTCTCTCTACGTCCCTCTCATAC
CCTCCGGTTTTTCCCGGTTTTGTTGCCCCCATTTGATTCTCCCAGTGTCT
GCGGATATCCGGGTGAACTCACATGCTGCGACGAGTGCCCCCGTGTCTTC
CACCTGGGGTGTCTGCGCGTCAGGCTGAATAGCCAGCAAGCCGCCGCCGG
CCAAACCACAGATGAGACGTGGCACTGCCCCGTGTGTACCGAGGGCCGGG
GCAACCAATCTGGTCGTCGGGGTGAGCCTCAATTGACCTACCATTTTCTG
CGCGGAAGTATTGGTGCATTTGTTCTCCTCCTGCTGTCAACACCCCCGGT
AACTTTCAGATCTAGCAGAGTATGCTGTGCACGTGTATTGCGGAGCCCCT
CCAAGACGTTCCGTCTTTAGGCAAAGAGATGATGGGATCGGGATTTCCTG
TACTACTGTCACACACCGCCGTGGATGTACACTACTTCGAGTTAATTTCG
AGAGGCAGCCGTTCGTGAGCTGTGTGGAAACGAAAAGTTGGGTGCATTAG
TGTTGTAGGCGTTGCGGGGTAAGACCGCGTTTTGTCGGGGATGGCGAAAC
TCGCCCACAGACTAAAGCAGAAACCGAGGCGGCACAGATATAAACACATG
TACGGGGTCATGCCACCCTGAAATGAAACAAGCCTCGACTCAAAAACCCC
GAGGCAACGCTATGTGGCACACCGCGTTGGACACTGCCGCGTCAGCTCGA
CACCAAGGTAGGTCACGCTTCCGTGGGAACGCTACCGGTAGGATTTTGCG
TCCGAGGCCTCCACATCACCGTGACCGTCCTTGCACGAAGAAAAGAAACA
CAGTGAGGGCGAGCAAGCAGCGTCCGACGCTTAACCGTGAACTAGATATC
TATGCTGTGCTAATTGTGGTTGAGGGAGCTTCCATAAGTTGATGTAGAGC
GCACTTGCCACACGGGAAAATAATGTCGCACATGTGGCGGTTTTTAAGAG
GAAGGTGCTAATGTTATGACCTCGGCAGTACATGGGGTCGCTGCACTCAG
TTCGGTTGATCGCCGTGCCCGAAAGAATCTGCTGCGTATCGCTAGCTGTT
TTGCTCAACACGCAGTTCTTGCACGTGCCTGCCACCCCTTGGCATGTTGC
GAACATGCTTCGTCCTCCTTGATGGTTCACAAGCACACGCACACATTTTT
TTCCCCGCAGGTAAGCATCGGCAAGGAGCACGCGCGTGACAAGCACGTGT
GATTCTCCTCTATAGGGAGCATGCCGGTGGGCAAGGAGTTGCTTTACTCG
TACCTTCCGCCTGTCGCCGTCGGTCTACAAGAGACGATAGCGGTGAAATG
TGCTTGCCGGGAGCCAAGGGGCCTTGCGCGGGCTACACACAGCGGGCACA
AGGGTCAACTGTAGAACGTGCGTTCTTATCATTCTTATCAAGTGCTCTTT
CATCATGAAATGTGGCCCTCTTGCATGGTTTGGCGCGCCCTGAAACAGTG
GTGGGAGACACTGTTTGGCAGACTTGAAAAAAAAGGGGAAAAAATAACAG
AAAGTTGATGTTGCAGGGCAGCGATCCCACCGGAGATTTTACTGCACTGT
TGTGTGTCTGCTTGGGTCATCTCTGGACGTGAAACACCCAAATAATGGGT
TGTCAGGGAGAGATCGGCTGGGTAGTTTTGAGCCAAGCGGCAGAAACTTG
AAAAGTAATTGTACGTTTGTCCATTGCACCGTGCGTTGGTAAGACACGGA
CAAGAACGGGGCCCGGTACCCCACCATGGTCGAGTCAGAGAAGATTGCAG
CTTGAAAACTTTTTGAGGTGTAGTTCGACACCAGCAGAGGTTGTTGGGGT
TCATCACGTTGGTGTGATGGAGTGTTAGGACGGGGGTGTGAGTGATCCTG
CCTGAAGACCGAAGCGCAGCTATGTAACACGGAGGACAATCTTACTCGTT
GTCGTACGGAAGAACGAGGATCAGTCTCGCCTTGTAATGTTGGCGGTGCA
CTTGGCACATCTTGAGCTTGAGCGGCTTACGGTGTATCAACGCCCATGGC
ACCTCGGTATGTGTCTGTATGGCGTACCGTAAGCTGTCTTATGCCTTCGT
ATCGGAAGTACCCTTAACCGCTCAAGCGAGCTGAGTGACGGGGACGGAGA
GGGAGCGAGCACGGTAATCCGTAGTACGTTAGAACATGTTGGGATATGAT
GGTCTCACGTGCTGATTGTCATTGTTTGTGAGGTAGTGATGCTGTCCATG
AGTGTTCGGATTTGAACCGGTAGTTACAGATTAATACGCAAGTGCACGGT
TCAGGGTCGGCGCCGAGAGCTCGGAAAGACTGAAGGATGAGAGTGCAATT
AAATGCCAGTTGCTCTGTGGACTTGTTGTGGATCCGTCCTGCTTACCCTT
GACCCTTCCGGAATGAGCCGCGAATGACAGGCGTGGGGGGCGGTGGCAGC
GAGACATGAATTTATGGGGCGGGAGAGGGGGGATGAGAGAAGTGTGGCGA
AAGTAGGGTGTGAATTACGATGTTGACTACTTCTTCTCAGCGAAAACCAC
CTGCGTCGCACCGGTGGCTGTCCACTGTCAACACGTCATAGTACTCAGGG
TCTATGGGAAGGGAAGGGCGGCAAGCCAACTATCCTCCGGGTGTGAAAGG
AAGTAGGGGATGAATAGGTCTGCGGTGTCGTGCGGGACTATGCGGATCAC
TGTGCCCTGCTTGATAGATAGACTATGGCTTTTATTGTCACTGTGCCCTG
CTTGATAGATAGACTCTGGCTTTTATTGTGGGTTCTAGCATGGGGTGTGC
CGCGCAGAAACTTAATCGCGATGCTGGTGGCGGTTGTGGTGTTGTACAGC
CACACAGAAACGCAATCGTTTGCAAATGCCGTTTCTGTTGAAAGGGGGGC
AGGCAGATGGTACCTTTCGCAACGGCTTGTGCCCAACCGTGGGAAACATG
TGCAAGGCGTACACGAGGAGACCACGAAAGAAAATTGCAATCAACGTCGA
GTCGGTAGCGTTCATCACACAAAAAATCTTGAAATGCAAGCACGATCGAT
CGCGATAATCTTGGCGCATAGCCGCCAAAAGGCCACGACATCACCACACA
CCATGCATGCTTACTTGCTTGCTGTTGATATTGCAGATCTCGCTCCACAT
ACCTACAGTTCTTTGTTCTTTAGACAAAAACACATTACATTGTGTCTACA
AGAAGAGATTGATTGGGCACCATTAATTTGACATACGTACACACACGCTT
AGAGAGGATTCAGTATCACACAATACAAGTCGGATCAAGGCATATGATAA
AGAGTGATCCGGGGCACTACGCCATGCTCGCTGCGGCGGTGGGAACCAGC
TACACATTGCTCCTATACTAAAACCGTTCTGAGAGAGTCTTCACGTCCAA
GAACAGGCGGTTCTCCAAACGATGGCCCCTCCCTGCTGTTTAGGCGGCCG
GTGCTACGTTTTTCACAATTTATCCCGTCGCGGGCTCGGTCCAGC

Coding sequence (CDS) from alignment at chr_27:4045528..4055672+

>Ec-27_004590.4 ID=Ec-27_004590.4|Name=Ec-27_004590.4|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1947bp|location=Sequence derived from alignment at chr_27:4045528..4055672+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGCACCTCAACACGTCCGCAGCCTCGGCGAGAGCCGTCGGGACAGACC
GCCGCCGCCGCCACCATTTGGGATTGCACCGCCCCCCGCCCTGACCGCCG
CCGCTTCCACGGCTCTCGCCGTGGCGCACCGAGACCGAGCCGCACACGCC
GCATGCCAGCCAGCGCGAGGCCCCCTGGCGACGAGTACGGTGTTTGGGCA
CTATCCCGCTTGTGGACACCATGCAGACGGTGGTGGCATTGGCTGGGTGG
ACGTCAGGCACACCAGCGGCAAGGGCACGGGTGCCTCTAGTGCCGCTCGA
GACGTCCGTAGGCTCGGCGAGAGCCGCCGGAACAGCCCACCGCCGCCGTC
GTTTAGTATTGCACCGCCAACCGCCCTGACAGCCGCCGCTTCCACGGCTA
TTGCCATGGCATACCGACACCAAGAAGAACTGGCCGCACACGCCGCACGC
CAGGAAGCGCAAGACACCCAGGCGGCAGGCACCATGAAAATCTGTGGGGT
AGGTTGTGGACACAATGTCGAGGGTGATCATGTTGGCTGGGTGAATATCA
GAGACGTCAGTGGCCGGGGCATGGGTGTCTCTACTGCCGCTCGGTACCTC
CGCAGCCTCGACGAGAGCCGCCAGAACAGGCGGTCACCGTTGGTTAGTAT
TGCACCGCCCACTGCCCTGACGGCCGCCGCTTCCACGGCTCTAGCCGTGG
CATACCGAGACCAACTGGCTGCACACGCCGCACGCCAGGCAGCGCGAGTC
CCCCTGGCGGCAAGCACCATGAACGTGTTTGGGCACTACCCTGGTGGTGG
ACACCATGGCGAGGGTGACGACACTAGCTGGGTGGATATCAGAGACGCCA
ACGGCAAGGGCACGGGTGTCTCTAGTGCCGCCAGGCGCTCTTACCCCTCG
TGCTCGATCGTTGCGGCTTCCATGGCTTTCGCGGCAAACCAGCCTTTCAG
AGCTCCTCCGGTGGCTAGCGCCGCGGAGACCGCGCACCACCTCGTCGAGA
AGGGCGCGGGTGGCTCTAGTGTCGCCAGGCGCTCTTACCCCTCATTCTCG
ATGGCCGCCGTTCCCGTGACTTTCGCGGCGAACCAGTCTTTCGGAGCTCC
TCCGGCGGCTAGCGCCGCGGTGACCGCGTACCACCTCGGCGGTGGACACC
TTTCTGGCAAGGGTTCAGGTTCCTCCGGTGCGGTCAGATTCTCTTCTGCG
GCAGGTAGCAGCACCGGCGGCGAGATGTACGCGACCGGCAGCGGCCGTGG
TGGTGACGGCGAAAAAAACAGCAGCACCATCAACGACGATGGTGGTAGTT
GCAGTGCCAAGCAATCTCTACCCACCTCCTCGACCGACGCCGCCGGAGAG
TCTGCTGCTGCTCCTCCTGTCGCTGGTAGTCCCCGTACAGCAGCAGGTGA
AGGGACGGATGGAAAGCCGGCACACCTGGAAAGAGCGGGGACCCAAGCCC
CGAAAAGCGGCACGAGGAAACCGGCGCAGAAGCGGCACCCCTGGGGCGGG
AAAGACTGGGCAGGCCACCCTTTATCCAAAAAGCTCCAGAAACACGTCAA
GGAGAACGACAAGGCGTGGAGGATGCAAGGCGGAATCATGATGGGAGCTG
ACGGCAGCCATTTCTTTTGCAGTGTCTGCGGATATCCGGGTGAACTCACA
TGCTGCGACGAGTGCCCCCGTGTCTTCCACCTGGGGTGTCTGCGCGTCAG
GCTGAATAGCCAGCAAGCCGCCGCCGGCCAAACCACAGATGAGACGTGGC
ACTGCCCCGTGTGTACCGAGGGCCGGGGCAACCAATCTGGTCGTCGGGGT
GAGCCTCAATTGACCTACCATTTTCTGCGCGGAAGTATTGGTGCATTTGT
TCTCCTCCTGCTGTCAACACCCCCGGTAACTTTCAGATCTAGCAGAGTAT
GCTGTGCACGTGTATTGCGGAGCCCCTCCAAGACGTTCCGTCTTTAG

Synonyms

The feature 'Ec-27_004590.4' has the following synonyms


Synonym
Esi0000_0348
Esi_0000_0348