Ec-28_000140.4 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ec-28_000140.4
Unique Name	Ec-28_000140.4
Type	polypeptide
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	543

Homology

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BLAST of Ec-28_000140.4 vs. uniprot
Match: D7FIG1_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIG1_ECTSI)

HSP 1 Score: 1015 bits (2625), Expect = 0.000e+0
Identity = 512/514 (99.61%), Postives = 513/514 (99.81%), Query Frame = 0

Query:    1 MLYLTLEDDPFPDQEYDEEALLELVRSVARRDGDDRTVSELIRFQDALERLGLLWTPLDSLDKHQAHELVRNLHLELTAPGDMVYLKHSPAMRSYVVLRGTVLLTNNVLDREGAEGVRVLGAGQEFGQPLEPDLDGDKPVEDFLEYAKTPHLELLHDSGGDVATTTRGGGRKDGRAELLVIGRQDWISTLQTCRSQFTNTTDKYDASKEPDHLKSKARLAFNFPAKGRAGDQLEIAIKYLTERVAFCADLPLEQVAAMAAAIELRGLTVPGRHVFRRGRECFGEAYIMFTGTADQIGGDKSGDRLITEGDLFGDEYFSVAVKDVLGIPFRTATVMTRTAPCELLVVPARECRRLRAFVALRNSEKAMAIFDKFFINLPRGVCSEIASLATFRTIKMNQKLAEDGDEVSTVFFVVRGECVSKSSKQLHQQPGKGHEEEEAQRYGPGDIVGWPYLMPRPPARGRSPIVARTAAITTTPQKTAIGGSAEDKPNTPPEGNEQERKRRSRRNAKEVHCA 514
            MLYLTLEDDPFPDQEYDEEALLELVRSVARRDGDDRTVSELIRFQDALERLGLLWTPLDSLDKHQAHELVRNLHLELTAPGDMVYLKHSPAMRSYVVLRGTVLLTNNVLDREGAEGVRVLGAGQEFGQPLEPDLDGDKPVEDFLEYAKTPHLELLHDSGGDVATTTRGGGRKDGRAELLVIGRQDWISTLQTCRSQFTNTTDKYDASKEPDHLKSKARLAFNFPAKGRAGDQLEIAIKYLTERVAFCADLPLEQVAAMAAAIELRGLTVPGRHVFRRGRECFGEAYIMFTGTADQIGGDKSGDRLITEGDLFGDEYFSVAVKDVLGIPFRTATVMTRTAPCELLVVPARECRRLRAFVALRNSEKAMAIFDKFFINLPRGVCSEIASLATFRTIKMNQKLAEDGDEVSTVFFVVRGECVSKSSKQLHQQPGKGHEEEEAQRYGPGDIVGWPYLMPRPPARGRSPIVARTAAITTTPQKTAIGGSAEDKPNTPPEGNEQERKRRSRRNAKE HC+
Sbjct:    1 MLYLTLEDDPFPDQEYDEEALLELVRSVARRDGDDRTVSELIRFQDALERLGLLWTPLDSLDKHQAHELVRNLHLELTAPGDMVYLKHSPAMRSYVVLRGTVLLTNNVLDREGAEGVRVLGAGQEFGQPLEPDLDGDKPVEDFLEYAKTPHLELLHDSGGDVATTTRGGGRKDGRAELLVIGRQDWISTLQTCRSQFTNTTDKYDASKEPDHLKSKARLAFNFPAKGRAGDQLEIAIKYLTERVAFCADLPLEQVAAMAAAIELRGLTVPGRHVFRRGRECFGEAYIMFTGTADQIGGDKSGDRLITEGDLFGDEYFSVAVKDVLGIPFRTATVMTRTAPCELLVVPARECRRLRAFVALRNSEKAMAIFDKFFINLPRGVCSEIASLATFRTIKMNQKLAEDGDEVSTVFFVVRGECVSKSSKQLHQQPGKGHEEEEAQRYGPGDIVGWPYLMPRPPARGRSPIVARTAAITTTPQKTAIGGSAEDKPNTPPEGNEQERKRRSRRNAKEWHCS 514

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BLAST of Ec-28_000140.4 vs. uniprot
Match: A0A6H5L5Z7_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Z7_9PHAE)

HSP 1 Score: 663 bits (1711), Expect = 7.460e-228
Identity = 350/451 (77.61%), Postives = 361/451 (80.04%), Query Frame = 0

Query:   32 DGDDRTVSELIRFQDALERLGLLWTPLDSLDKHQAHELVRNLHLELTAPGDMVYLKHSPAMRSYVVLRGTVLLTNNVLDREGAEGVRVLGAGQEFGQPLEPDLDGDKPVEDFLEYAKTPHLELLHDSGGDVATTTRGGGRKDGRAELLVIGRQDWISTLQTCR--------------------------------SQFTNTTDKYDASKEPDHLKSKARLAFNFPAKGRAGDQLEIAIKYLTERVAFCADLPLEQVAAMAAAIELRGLTVPGRHVFRRGRECFGEAYIMFTGTADQIGGDKSGDRLITEGDLFGDEYFSVAVKDVLGIPFRTATVMTRTAPCELLVVPARECRRLRAFVALRNSEKAMAIFDKFFINLPRGVCSEIASLATFRTIKMNQKLAEDGDEVSTVFFVVRGECVSKSSKQLHQQPGKGHEEEEAQRYGPGDIVGW 450
            DGDDRTVSELIRFQDALERLGLLWTPLDSLDKHQAHE VRNLHLELTAPGDMVYLKHSPAMRSYVVLRGTVLLTNNVLDREGAEGVRVLGAGQEFG PL+PDLDGDKPVEDFLEYAKTPHLEL HD GGDVA  TRGGGRKDGRAELLVIGRQDW+STL+TCR                                SQF NTT+KYDA KEPD LKSKARLAFNFPAKGRAGDQL+IAIKYLTERVAFCADLPLEQ+    A+I L   ++     F     C                          EGDLFGDEY SVAVK VLGIPFRTATVMTRTAPCELLVVPARECRRLRAFVALRNSEKAMAIFDKFFINLP+GVCSEIASLATFRTIKMNQKLAEDGDEVSTVFFVVRGECVSKSSKQ H+QPG G EEEEAQRYGPGDIVGW
Sbjct:   17 DGDDRTVSELIRFQDALERLGLLWTPLDSLDKHQAHEFVRNLHLELTAPGDMVYLKHSPAMRSYVVLRGTVLLTNNVLDREGAEGVRVLGAGQEFGHPLDPDLDGDKPVEDFLEYAKTPHLELPHDGGGDVAAKTRGGGRKDGRAELLVIGRQDWVSTLRTCRHVTIVTFGLNTLSSVARLLLGRTFYLHKTISRSQFLNTTEKYDALKEPDPLKSKARLAFNFPAKGRAGDQLKIAIKYLTERVAFCADLPLEQMPTRLASIPLPYDSLDATSRFHVLCAC-------------------------REGDLFGDEYLSVAVKHVLGIPFRTATVMTRTAPCELLVVPARECRRLRAFVALRNSEKAMAIFDKFFINLPKGVCSEIASLATFRTIKMNQKLAEDGDEVSTVFFVVRGECVSKSSKQFHRQPGTGKEEEEAQRYGPGDIVGW 442

The following BLAST results are available for this feature:

BLAST of Ec-28_000140.4 vs. uniprot

BLAST of Ec-28_000140.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FIG1_ECTSI	0.000e+0	99.61	Cyclic nucleotide-binding domain-containing protei...	[more]
A0A6H5L5Z7_9PHAE	7.460e-228	77.61	Cyclic nucleotide-binding domain-containing protei...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10		coord: 221..361 e-value: 4.4E-7 score: 31.4 coord: 362..479 e-value: 2.4E-7 score: 32.3
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10		coord: 56..203 e-value: 1.7E-6 score: 29.9
None	No IPR available	PANTHER	PTHR23011	UNCHARACTERIZED	coord: 270..459
IPR000595	Cyclic nucleotide-binding domain	PROSITE	PS50042	CNMP_BINDING_3	coord: 57..128 score: 10.428
IPR018490	Cyclic nucleotide-binding-like	SUPERFAMILY	51206	cAMP-binding domain-like	coord: 57..128
IPR018490	Cyclic nucleotide-binding-like	SUPERFAMILY	51206	cAMP-binding domain-like	coord: 373..454
IPR018490	Cyclic nucleotide-binding-like	SUPERFAMILY	51206	cAMP-binding domain-like	coord: 230..354

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_28	contig	chr_28:192674..201092 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-28_000140.4	Ec-28_000140.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	mRNA	chr_28 186022..201311 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ec-28_000140.4 ID=Ec-28_000140.4|Name=Ec-28_000140.4|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=543bp
MLYLTLEDDPFPDQEYDEEALLELVRSVARRDGDDRTVSELIRFQDALER
LGLLWTPLDSLDKHQAHELVRNLHLELTAPGDMVYLKHSPAMRSYVVLRG
TVLLTNNVLDREGAEGVRVLGAGQEFGQPLEPDLDGDKPVEDFLEYAKTP
HLELLHDSGGDVATTTRGGGRKDGRAELLVIGRQDWISTLQTCRSQFTNT
TDKYDASKEPDHLKSKARLAFNFPAKGRAGDQLEIAIKYLTERVAFCADL
PLEQVAAMAAAIELRGLTVPGRHVFRRGRECFGEAYIMFTGTADQIGGDK
SGDRLITEGDLFGDEYFSVAVKDVLGIPFRTATVMTRTAPCELLVVPARE
CRRLRAFVALRNSEKAMAIFDKFFINLPRGVCSEIASLATFRTIKMNQKL
AEDGDEVSTVFFVVRGECVSKSSKQLHQQPGKGHEEEEAQRYGPGDIVGW
PYLMPRPPARGRSPIVARTAAITTTPQKTAIGGSAEDKPNTPPEGNEQER
KRRSRRNAKEVHCAHPQAEIGGTFVFIAFGRSRRRGEFRWRE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014710	RmlC-like_jellyroll
IPR000595	cNMP-bd_dom
IPR018490	cNMP-bd-like