Ec-28_000090.2 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ec-28_000090.2
Unique Name	Ec-28_000090.2
Type	polypeptide
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	1002

Homology

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BLAST of Ec-28_000090.2 vs. uniprot
Match: D7FIF6_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIF6_ECTSI)

HSP 1 Score: 725 bits (1871), Expect = 4.030e-233
Identity = 579/672 (86.16%), Postives = 581/672 (86.46%), Query Frame = 0

Query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
            MELEKQGVALKAASAMLKGGKTADKSLFRRGSKRLSNEGVDGALNAKHLDEIKKAEHLKKKLKAHHDEARAVLAKKLQVENARTGRVIKTNLGKYANPKLAQGAKAAVLASVVEYLNGEEFVRIVAAPLNYQSPDFVRAMEAESGVMEISFSPTNARQRSMASLPVGAPDYDSKMALLQEQKAIEQQQXXXXXXXXXXXXXXXXXKAAMEQDAADALAMANAANQRRLEEMQRQQDEEXXXXXXXXXXXXXXXXXEAELARMRHKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ARHAEXVARHKA                        +  H +EA             XXXXXXXXXXX                           XXXXXXXXXXXXXXXXXXXXX A X                XXXX     AQIEKELEERVARDIQIERDRVAAESAALQAKMKEFEEEREKAALRAAAEVEAQKAAEAALVARERAAAESLALGRALSAKADLDATTASKEGLSSDRRDPSGREAGTAPVPIGYLVGDNVQALCTPVGGATGSKEYISGEVAHVNPDGSLDVILADGRMRQEVPIAEIKFVSRSEPPSPAGSSAGEQSFWDGNEQGSESSAGQNSVR
Sbjct:    1 MELEKQGVALKAASAMLKGGKTADKSLFRRGSKRLSNEGVDGALNAKHLDEIKKAEHLKKKLKAHHDEARAVLAKKLQVENARTGRVIKTNLGKYANPKLAQGAKAAVLASVVEYLNGEEFVRIVAAPLNYQSPDFVRAMEAESGVMEISFSPTNARQRSMASLPVGAPDYDSKMALLQEQKAIEQQQXXXXXXXXXXXXXXXXXKAAMEQDAADALAMANAANQRRLEEMQRQQDEEXXXXXXXXXXXXXXXXXEAELARMRHKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARHAEXVARHKAXXXXXNEGVGLENGVLTSQSDSPGVVHHQQEARLEKEALEEMRRRXXXXXXXXXXXLQEAVAKHQEETRLEAERVKAELEALKXXXXXXXXXXXXXXXXXXXXXRARXAEAAAEALRIEQENDRXXXXEVAMRAQIEKELEERVARDIQIERDRVAAESAALQAKMKEFEEEREKAALRAAAEVEAQKAAEAALVARERAAAESLALGRALSAKADLDATTASKEGLSSDRRDPSGREAGTAPVPIGYLVGDNVQALCTPVGGATGSKEYISGEVAHVNPDGSLDVILADGRMRQEVPIAEIKFVSRSEPPSPAGSSAGEQSFWDGNEQGSESSAGQNSVR 672

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BLAST of Ec-28_000090.2 vs. uniprot
Match: A0A6H5KTF3_9PHAE (GT2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTF3_9PHAE)

HSP 1 Score: 429 bits (1102), Expect = 2.640e-128
Identity = 259/340 (76.18%), Postives = 273/340 (80.29%), Query Frame = 0

Query:  654 AQIEKELEERVARDIQIERDRVAAESAALQAKMKEFEEEREKAALRAAAEVEAQKAAEAALVARERAAAESLALGRALSAKADLDATTASKEGLSSDRRD-PSGREAGTAPVPIGYLVGDNVQALCTPVGGATGSKEYISGEVAHVNPDGSLDVILADGRMRQEVPIAEIKFVSRSEPPSPAGSSAGEQSFWDGNEQGSESSAGQNSVRSSPSSPKHLLEQTQSFGHEISETKAPHSPADGEGLRDGGKPGWQTATNGSLDDILGTKLRTAEKEAAPATRYTRGKGGDDAPAAVAAVAGSRETPKKRGSLXXXLGIKVNRPDRRSMRNILEEGDSVEVLV 992
            AQIEKELEERVARDIQIERDRVAAESAALQAKMKEFEEEREKAALR AAEV+AQKAAEAALVARERAAAES+ALGRALSAKADLDATTASK+ +S DRRD PS   AGTAPVP GY+VGDNVQALCTPVGGATGSKEYISGEVAHVNP GSLDVILADGRMRQEVP+AEIKFVSRS                                  SPSS KHLLEQTQSFG + SETKAPHSPADGEGL+DGGKP WQT+TNG LDD+LGT+LRTAEKEAAPATR T             A AGSRETPKKRGSL   LGIKVNRPDRRS+RNILEEGDSVE ++
Sbjct:    3 AQIEKELEERVARDIQIERDRVAAESAALQAKMKEFEEEREKAALRVAAEVKAQKAAEAALVARERAAAESMALGRALSAKADLDATTASKKMVSLDRRDHPS---AGTAPVPGGYIVGDNVQALCTPVGGATGSKEYISGEVAHVNPGGSLDVILADGRMRQEVPVAEIKFVSRS----------------------------------SPSSLKHLLEQTQSFGQKTSETKAPHSPADGEGLQDGGKPRWQTSTNGILDDVLGTQLRTAEKEAAPATRGTXXXXXXXXXXXXXAAAGSRETPKKRGSLDDILGIKVNRPDRRSIRNILEEGDSVEXVL 305

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BLAST of Ec-28_000090.2 vs. uniprot
Match: A0A6H5KRP7_9PHAE (GT2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRP7_9PHAE)

HSP 1 Score: 211 bits (536), Expect = 8.150e-60
Identity = 117/144 (81.25%), Postives = 120/144 (83.33%), Query Frame = 0

Query:  228 MLKGGKTADKSLFRRGSKRLSNEGVDGALNAKHLDEIKKAEHLKKKLKAHHDEARAVLAKKLQVENARTGRVIKTNLGKYANPKLAQGAKAAVLASVVEYLNGEEFVRIVAAPLNYQSPDFVRAMEAESGVMEISFSPTNARQR 371
            MLKGGKTAD SLFRRGSKRLS+EGVD ALNAKHL               HHDEARA+LAKKLQVENARTGRVIKTNLGKYANPKLAQGAKAAVLASVVEYLNGEEFVRIV APLNYQSPDFVRA EAE G + IS S TNARQR
Sbjct:    1 MLKGGKTADNSLFRRGSKRLSSEGVDDALNAKHLXXXXXXXXXXXXXXXHHDEARAILAKKLQVENARTGRVIKTNLGKYANPKLAQGAKAAVLASVVEYLNGEEFVRIVTAPLNYQSPDFVRATEAELGAIGISLSLTNARQR 144

The following BLAST results are available for this feature:

BLAST of Ec-28_000090.2 vs. uniprot

BLAST of Ec-28_000090.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D7FIF6_ECTSI	4.030e-233	86.16	Cellulose synthase (UDP-forming), family GT2 n=1 T...	[more]
A0A6H5KTF3_9PHAE	2.640e-128	76.18	GT2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta...	[more]
A0A6H5KRP7_9PHAE	8.150e-60	81.25	GT2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 672..707
None	No IPR available	COILS	Coil	Coil	coord: 389..646
None	No IPR available	COILS	Coil	Coil	coord: 257..284
None	No IPR available	PANTHER	PTHR43939	FAMILY NOT NAMED	coord: 179..733

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_28	contig	chr_28:65619..76225 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-28_000090.2	Ec-28_000090.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	mRNA	chr_28 65467..76226 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ec-28_000090.2 ID=Ec-28_000090.2|Name=Ec-28_000090.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=1002bp
MDRSPSRLRSAGGSVASGASIPTSPESQYDGRGSLVGRSTRAADHARDQV
QSALDGLLSDDDPSNPRSPPGRYAPSMDGTRSPGQPEAQGRRSLVPPDPI
IPIEASYPRSGRSSTDLLSPARKASSVRAAAGGGGYTPTGAGGRRKRSSV
RSPKGYNMGTSQRQAVNISTLEGLQVFLDEKQKEVVKAHARRTNELEAML
AKEESYFGTLLDMELEKQGVALKAASAMLKGGKTADKSLFRRGSKRLSNE
GVDGALNAKHLDEIKKAEHLKKKLKAHHDEARAVLAKKLQVENARTGRVI
KTNLGKYANPKLAQGAKAAVLASVVEYLNGEEFVRIVAAPLNYQSPDFVR
AMEAESGVMEISFSPTNARQRSMASLPVGAPDYDSKMALLQEQKAIEQQQ
RMEEEALRRQEMLERENKAAMEQDAADALAMANAANQRRLEEMQRQQDEE
LEEQRRQLDEHQEHLRREAELARMRHKEELDLHRAEMEREREAVEARQAE
AKRLQEEELEKQRQEMRRKHEEDMELQRQELARHAEEVARHKAELAKHNE
EARLEKEALEEMRRRENEAEEDERRRLQEAVAKHQEETRLEAERVKAELE
ALKLEREAVAQAEKAEREAEEEARRAREAEAAAEALRIEQENDRRKASEV
AMRAQIEKELEERVARDIQIERDRVAAESAALQAKMKEFEEEREKAALRA
AAEVEAQKAAEAALVARERAAAESLALGRALSAKADLDATTASKEGLSSD
RRDPSGREAGTAPVPIGYLVGDNVQALCTPVGGATGSKEYISGEVAHVNP
DGSLDVILADGRMRQEVPIAEIKFVSRSEPPSPAGSSAGEQSFWDGNEQG
SESSAGQNSVRSSPSSPKHLLEQTQSFGHEISETKAPHSPADGEGLRDGG
KPGWQTATNGSLDDILGTKLRTAEKEAAPATRYTRGKGGDDAPAAVAAVA
GSRETPKKRGSLDDILGIKVNRPDRRSMRNILEEGDSVEVLVPPADGNGD
GG