Ec-27_006820.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-27_006820.1
Unique NameEc-27_006820.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length175
Homology
BLAST of Ec-27_006820.1 vs. uniprot
Match: D7FSY5_ECTSI (Threonine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSY5_ECTSI)

HSP 1 Score: 111 bits (278), Expect = 1.180e-25
Identity = 61/66 (92.42%), Postives = 61/66 (92.42%), Query Frame = 0
Query:    1 MSTAAAPAAAAXAVAVEVVEKEELPTNEGSPELLKIRDTSAHVMAMAVQRLFPGTQVTIGPWIDNG 66
            MSTAAAPAA  X  AVEVVEKEELPTNEGSPELLKIR TSAHVMAMAVQRLFPGTQVTIGPWIDNG
Sbjct:   73 MSTAAAPAAXXXXXAVEVVEKEELPTNEGSPELLKIRHTSAHVMAMAVQRLFPGTQVTIGPWIDNG 138          
BLAST of Ec-27_006820.1 vs. uniprot
Match: A0A6H5JBI8_9PHAE (Threonine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBI8_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 1.220e-24
Identity = 61/66 (92.42%), Postives = 61/66 (92.42%), Query Frame = 0
Query:    1 MSTAAAPAAAAXAVAVEVVEKEELPTNEGSPELLKIRDTSAHVMAMAVQRLFPGTQVTIGPWIDNG 66
            MSTAAAPAAA  A AVEVVEKEELPTNE SPELLKIR TSAHVMAMAVQRLFPGTQVTIGPWIDNG
Sbjct:   73 MSTAAAPAAA-PAAAVEVVEKEELPTNESSPELLKIRHTSAHVMAMAVQRLFPGTQVTIGPWIDNG 137          
BLAST of Ec-27_006820.1 vs. uniprot
Match: A0A7S1EQB6_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EQB6_9RHOD)

HSP 1 Score: 77.0 bits (188), Expect = 2.140e-13
Identity = 36/43 (83.72%), Postives = 39/43 (90.70%), Query Frame = 0
Query:   24 LPTNEGSPELLKIRDTSAHVMAMAVQRLFPGTQVTIGPWIDNG 66
            LPTN+ SPELLKIR T+AHVMAMAVQRLFP  QVTIGPWI+NG
Sbjct:   88 LPTNDSSPELLKIRHTTAHVMAMAVQRLFPDAQVTIGPWIENG 130          
BLAST of Ec-27_006820.1 vs. uniprot
Match: A0A835ZFX3_9STRA (Threonine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFX3_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 2.990e-13
Identity = 43/58 (74.14%), Postives = 48/58 (82.76%), Query Frame = 0
Query:    9 AAAXAVAVEVVEKEELPTNEGSPELLKIRDTSAHVMAMAVQRLFPGTQVTIGPWIDNG 66
            AAA A+A EVV  E LPTN+ S  LLKIR T+AHVMAMAVQ+LFP TQVTIGPWID+G
Sbjct:   76 AAAPAIAEEVVPIE-LPTNKNSENLLKIRHTTAHVMAMAVQKLFPETQVTIGPWIDSG 132          
BLAST of Ec-27_006820.1 vs. uniprot
Match: A0A7S0UC53_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UC53_HEMAN)

HSP 1 Score: 76.3 bits (186), Expect = 3.330e-13
Identity = 37/43 (86.05%), Postives = 38/43 (88.37%), Query Frame = 0
Query:   24 LPTNEGSPELLKIRDTSAHVMAMAVQRLFPGTQVTIGPWIDNG 66
            LPTNE SPELLKIR T+AHVMAMAVQRLFP  QVTIGPWID G
Sbjct:  124 LPTNENSPELLKIRHTTAHVMAMAVQRLFPKAQVTIGPWIDYG 166          
BLAST of Ec-27_006820.1 vs. uniprot
Match: A0A1Y1IJ25_KLENI (Threonine--tRNA ligase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IJ25_KLENI)

HSP 1 Score: 76.6 bits (187), Expect = 4.110e-13
Identity = 37/47 (78.72%), Postives = 41/47 (87.23%), Query Frame = 0
Query:   20 EKEELPTNEGSPELLKIRDTSAHVMAMAVQRLFPGTQVTIGPWIDNG 66
            E+ ELPTN+ S  LLKIR TSAHVMAMAVQ+LFPGTQVTIGPWI+ G
Sbjct:  126 ERVELPTNDSSETLLKIRHTSAHVMAMAVQKLFPGTQVTIGPWIEKG 172          
BLAST of Ec-27_006820.1 vs. uniprot
Match: A0A7S1DHG6_HEMAN (Threonine--tRNA ligase n=3 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DHG6_HEMAN)

HSP 1 Score: 76.3 bits (186), Expect = 5.590e-13
Identity = 37/43 (86.05%), Postives = 38/43 (88.37%), Query Frame = 0
Query:   24 LPTNEGSPELLKIRDTSAHVMAMAVQRLFPGTQVTIGPWIDNG 66
            LPTNE SPELLKIR T+AHVMAMAVQRLFP  QVTIGPWID G
Sbjct:  129 LPTNENSPELLKIRHTTAHVMAMAVQRLFPKAQVTIGPWIDYG 171          
BLAST of Ec-27_006820.1 vs. uniprot
Match: A0A7S0BRC3_9RHOD (Threonine--tRNA ligase (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BRC3_9RHOD)

HSP 1 Score: 75.1 bits (183), Expect = 1.200e-12
Identity = 35/44 (79.55%), Postives = 39/44 (88.64%), Query Frame = 0
Query:   23 ELPTNEGSPELLKIRDTSAHVMAMAVQRLFPGTQVTIGPWIDNG 66
            ELPTNE + ELL++R T+AHVMAMAVQRLFP  QVTIGPWIDNG
Sbjct:   65 ELPTNENNEELLRMRHTTAHVMAMAVQRLFPNAQVTIGPWIDNG 108          
BLAST of Ec-27_006820.1 vs. uniprot
Match: W7TW93_9STRA (Threonine--tRNA ligase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TW93_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.810e-12
Identity = 38/58 (65.52%), Postives = 45/58 (77.59%), Query Frame = 0
Query:    9 AAAXAVAVEVVEKEELPTNEGSPELLKIRDTSAHVMAMAVQRLFPGTQVTIGPWIDNG 66
            AAA +  V   +  +LP+N+ SP LL+IR TSAHVMAMAVQRLFP  QVTIGPWI+NG
Sbjct:  110 AAATSTEVRPTQAVKLPSNDQSPNLLRIRHTSAHVMAMAVQRLFPSVQVTIGPWIENG 167          
BLAST of Ec-27_006820.1 vs. uniprot
Match: A0A7R9Y5H9_9VIRI (Threonine--tRNA ligase n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y5H9_9VIRI)

HSP 1 Score: 74.7 bits (182), Expect = 1.870e-12
Identity = 34/44 (77.27%), Postives = 39/44 (88.64%), Query Frame = 0
Query:   23 ELPTNEGSPELLKIRDTSAHVMAMAVQRLFPGTQVTIGPWIDNG 66
            ELPTNE S  LL++R TS+HVMAMAVQ+L+PG QVTIGPWIDNG
Sbjct:   63 ELPTNESSDRLLRLRHTSSHVMAMAVQKLYPGAQVTIGPWIDNG 106          
The following BLAST results are available for this feature:
BLAST of Ec-27_006820.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSY5_ECTSI1.180e-2592.42Threonine--tRNA ligase n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JBI8_9PHAE1.220e-2492.42Threonine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP... [more]
A0A7S1EQB6_9RHOD2.140e-1383.72Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A835ZFX3_9STRA2.990e-1374.14Threonine--tRNA ligase n=1 Tax=Tribonema minus Tax... [more]
A0A7S0UC53_HEMAN3.330e-1386.05Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A1Y1IJ25_KLENI4.110e-1378.72Threonine--tRNA ligase n=1 Tax=Klebsormidium niten... [more]
A0A7S1DHG6_HEMAN5.590e-1386.05Threonine--tRNA ligase n=3 Tax=Hemiselmis andersen... [more]
A0A7S0BRC3_9RHOD1.200e-1279.55Threonine--tRNA ligase (Fragment) n=1 Tax=Rhodosor... [more]
W7TW93_9STRA1.810e-1265.52Threonine--tRNA ligase n=1 Tax=Nannochloropsis gad... [more]
A0A7R9Y5H9_9VIRI1.870e-1277.27Threonine--tRNA ligase n=1 Tax=Prasinoderma coloni... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.980.10coord: 32..74
e-value: 2.4E-8
score: 36.5
NoneNo IPR availablePANTHERPTHR11451:SF44THREONINE--TRNA LIGASE, CHLOROPLASTIC/MITOCHONDRIAL 2coord: 23..66
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..10
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..174
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
IPR002320Threonine-tRNA ligase, class IIaPANTHERPTHR11451TRNA SYNTHETASE-RELATEDcoord: 23..66
IPR018163Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilySUPERFAMILY55186ThrRS/AlaRS common domaincoord: 34..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:6247019..6257268 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_006820.1Ec-27_006820.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_27 6247019..6258077 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-27_006820.1 ID=Ec-27_006820.1|Name=Ec-27_006820.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=175bp
MSTAAAPAAAAPAVAVEVVEKEELPTNEGSPELLKIRDTSAHVMAMAVQR
LFPGTQVTIGPWIDNGGEDDVVRRFSGNGERPVDFAPVLQGQHLKGATGS
GRTKTGGFAALGVWGSDGMNEEFWPATARPPRVLKRGRFHVQETRCYDMC
LSRPFHTPLGRVHVHHSPQPAPNR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002320Thr-tRNA-ligase_IIa
IPR018163Thr/Ala-tRNA-synth_IIc_edit