Ec-27_006320.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-27_006320.1
Unique NameEc-27_006320.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length314
Homology
BLAST of Ec-27_006320.1 vs. uniprot
Match: D8LAU9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAU9_ECTSI)

HSP 1 Score: 531 bits (1367), Expect = 2.830e-189
Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0
Query:   19 MGFQATAFSSPIRANKPLQRPXXXXXXXXXXXXLGVGGWLSSPPRAISRTSSSRRRPHRPYASLFDSGDENNARDDSPNPGNADSQGEAPESESAPSSPDGGAKPVPRADEQLTGSLADAGATGEGPPQAEGEAAAAGEGAEEEQVDWDKAWASTRQRMEREKRAAPAFSGRKQVVATKNEDGGYDFEEISADGSSRMRGDKGRGGFGFADSNQVEDGPGGIRRKEQEAVNFATTNQAFAGLFAILLASLIFEVYVYMSGGITNGSTRFQDMGQPTTYDALPLPATPPTDSDLVV 313
            MGFQATAFSSPIRANKPLQRPXXXXXXXXXXXXLGVGGWLSSPPRAISRTSSSRRRPHRPYASLFDSGDENNARDDSPNPGNADSQGEAPESESAPSSPDGGAKPVPRADEQLTGSLADAGATGEGPPQAEGEAAAAGEGAEEEQVDWDKAWASTRQRMEREKRAAPAFSGRKQVVATKNEDGGYDFEEISADGSSRMRGDKGRGGFGFADSNQVEDGPGGIRRKEQEAVNFATTNQAFAGLFAILLASLIFEVYVYMSGGITNGSTRFQDMGQPTTYDALPLPATPPTDSDLVV
Sbjct:    1 MGFQATAFSSPIRANKPLQRPXXXXXXXXXXXXLGVGGWLSSPPRAISRTSSSRRRPHRPYASLFDSGDENNARDDSPNPGNADSQGEAPESESAPSSPDGGAKPVPRADEQLTGSLADAGATGEGPPQAEGEAAAAGEGAEEEQVDWDKAWASTRQRMEREKRAAPAFSGRKQVVATKNEDGGYDFEEISADGSSRMRGDKGRGGFGFADSNQVEDGPGGIRRKEQEAVNFATTNQAFAGLFAILLASLIFEVYVYMSGGITNGSTRFQDMGQPTTYDALPLPATPPTDSDLVV 295          
BLAST of Ec-27_006320.1 vs. uniprot
Match: A0A836C767_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C767_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 1.820e-11
Identity = 59/171 (34.50%), Postives = 88/171 (51.46%), Query Frame = 0
Query:  164 VDWDKAWASTRQRM-------EREKRAA----------PAFSGRKQVVATKNEDGGYDFEEISADGSSRMRGDKGRGGFGF-ADSNQVEDGPGGIRRKEQEAVNFATTNQAFAGLFAILLASLIFEVYVYMSGGITNGSTRFQDMGQPTTY--DALPLPATPP-TDSDLVV 313
            VDWD AWA+ ++ M       +   RA           PAF+GRK+++ T N++ GY + EI A G     G+   GGF    DS Q++D    I  KE++ V     +Q F    A++   L F + V M+GGI++G++RF+D+  P      A+P P+     D DLVV
Sbjct:  115 VDWDGAWAAKQKEMGNGDSGSDDSARAVEPXXXXXVSRPAFAGRKEIIVTGNKEEGYTYTEIDASGRVSRAGEA-DGGFRLDEDSPQLKDARRRIIEKEEQLVEAVAFDQVFVVGGALIAVLLAFMINVGMTGGISDGASRFRDVELPVNGVPPAVPHPSNQVYPDDDLVV 284          
The following BLAST results are available for this feature:
BLAST of Ec-27_006320.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LAU9_ECTSI2.830e-189100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C767_9STRA1.820e-1134.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..27
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 277..313
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 256..276
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..255
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availableSUPERFAMILY101447Formin homology 2 domain (FH2 domain)coord: 41..50
NoneNo IPR availableTMHMMTMhelixcoord: 258..280

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:5836283..5838466 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_006320.1Ec-27_006320.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_27 5835752..5839909 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-27_006320.1 ID=Ec-27_006320.1|Name=Ec-27_006320.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=314bp
MRALCFLPSNAGVGLQAGMGFQATAFSSPIRANKPLQRPPPPPPPPPPPP
PLGVGGWLSSPPRAISRTSSSRRRPHRPYASLFDSGDENNARDDSPNPGN
ADSQGEAPESESAPSSPDGGAKPVPRADEQLTGSLADAGATGEGPPQAEG
EAAAAGEGAEEEQVDWDKAWASTRQRMEREKRAAPAFSGRKQVVATKNED
GGYDFEEISADGSSRMRGDKGRGGFGFADSNQVEDGPGGIRRKEQEAVNF
ATTNQAFAGLFAILLASLIFEVYVYMSGGITNGSTRFQDMGQPTTYDALP
LPATPPTDSDLVV*
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