Ec-27_006300.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-27_006300.1
Unique NameEc-27_006300.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length151
Homology
BLAST of Ec-27_006300.1 vs. uniprot
Match: D8LAV1_ECTSI (Similar to syntaxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAV1_ECTSI)

HSP 1 Score: 270 bits (689), Expect = 4.950e-91
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0
Query:    1 MNDWKAPIGRGAGGGSRNYGGPNGTAEKVDYSRLPNEAGPGDDGEGDDWIQRQIRGHKSQMEHQDAHLSEIGQTASRLGNISLEISKELDQQNKMLENVNTDFEEAIGGLDAVTKKTQELIKKSGGMRNFLIILVXXXXXXXXXXXVLYT 150
            MNDWKAPIGRGAGGGSRNYGGPNGTAEKVDYSRLPNEAGPGDDGEGDDWIQRQIRGHKSQMEHQDAHLSEIGQTASRLGNISLEISKELDQQNKMLENVNTDFEEAIGGLDAVTKKTQELIKKSGGMRNFLIILVXXXXXXXXXXXVLYT
Sbjct:    1 MNDWKAPIGRGAGGGSRNYGGPNGTAEKVDYSRLPNEAGPGDDGEGDDWIQRQIRGHKSQMEHQDAHLSEIGQTASRLGNISLEISKELDQQNKMLENVNTDFEEAIGGLDAVTKKTQELIKKSGGMRNFLIILVXXXXXXXXXXXVLYT 150          
BLAST of Ec-27_006300.1 vs. uniprot
Match: A0A835YWI7_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWI7_9STRA)

HSP 1 Score: 127 bits (319), Expect = 6.930e-35
Identity = 76/150 (50.67%), Postives = 93/150 (62.00%), Query Frame = 0
Query:    1 MNDWKAPIGRGAGGGSRNYGGPNGTAEKVDYSRLPNEAGPGDDGEGDDWIQRQIRGHKSQMEHQDAHLSEIGQTASRLGNISLEISKELDQQNKMLENVNTDFEEAIGGLDAVTKKTQELIKKSGGMRNFLIILVXXXXXXXXXXXVLYT 150
            MN+WK       GG SR  GG +   +  DYSRLP      DD   +DWI+RQ+R HK+Q+  QD HL +IG+   RLG ISLEISKELD QNKML  +  D++EAI G++ VTKKT+ELIK SGG RNF II             V+YT
Sbjct:    1 MNNWK-------GGSSR--GGMSPYTDTPDYSRLPRNTNASDDE--NDWIRRQVREHKTQVAEQDRHLEDIGRGVERLGEISLEISKELDGQNKMLSEMEVDYDEAIYGMEMVTKKTKELIKTSGGPRNFCIIAFLVAVVVVLLVLVIYT 139          
BLAST of Ec-27_006300.1 vs. uniprot
Match: A0A7S4IM31_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IM31_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 2.090e-22
Identity = 52/133 (39.10%), Postives = 81/133 (60.90%), Query Frame = 0
Query:   19 YGGPNGTAEKVDYSRLPN-EAGPGDDGEGDDWIQRQIRGHKSQMEHQDAHLSEIGQTASRLGNISLEISKELDQQNKMLENVNTDFEEAIGGLDAVTKKTQELIKKSGGMRNFLIILVXXXXXXXXXXXVLYT 150
            +G   G   K  Y ++P+ +    D  E DD+I +Q+R  + QM+ QD  L  +GQ+A RLG +S+ I +EL QQNK+L+ +  D ++A   LD VT+KT+EL+++SGG +NFLII+            ++YT
Sbjct:    2 FGNSRGARGKGKYRQVPHHDYSDSDSDEADDFISQQVRNQRLQMKRQDEGLEMLGQSADRLGQLSMNIHEELGQQNKLLDEMEDDLDQATTRLDFVTQKTRELVQRSGGKKNFLIIVGLTIVVIILIFLIIYT 134          
BLAST of Ec-27_006300.1 vs. uniprot
Match: A0A7S2P3Q0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P3Q0_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 6.070e-22
Identity = 51/120 (42.50%), Postives = 72/120 (60.00%), Query Frame = 0
Query:   31 YSRLPNEAGPGDDGEGDDWIQRQIRGHKSQMEHQDAHLSEIGQTASRLGNISLEISKELDQQNKMLENVNTDFEEAIGGLDAVTKKTQELIKKSGGMRNFLIILVXXXXXXXXXXXVLYT 150
            Y ++P      D    DD+IQRQI+  + Q++ QD  L  +  +A+RLG +S+ IS ELD QNKML ++  D  +A   LD VT+KT+ELI+KSGG +NF IIL            ++YT
Sbjct:   16 YQQVPISGDSDDSDNDDDFIQRQIKDQRQQLQKQDEGLEMLSLSATRLGELSMNISTELDAQNKMLNDMENDLSDATDNLDYVTRKTKELIQKSGGKKNFCIILGLIGVIVVLFFLIVYT 135          
BLAST of Ec-27_006300.1 vs. uniprot
Match: A0A7S2V0G4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0G4_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 4.470e-21
Identity = 49/127 (38.58%), Postives = 75/127 (59.06%), Query Frame = 0
Query:   24 GTAEKVDYSRLPNEAGPGDDGEGDDWIQRQIRGHKSQMEHQDAHLSEIGQTASRLGNISLEISKELDQQNKMLENVNTDFEEAIGGLDAVTKKTQELIKKSGGMRNFLIILVXXXXXXXXXXXVLYT 150
            G A    YS+LP + G  DD   +D+I+  +R  + Q+  QD HL E+G    RLG++SL+I  E+  QNK++  ++ D  +A   LD +T+KT+EL+ KSGG + F++I+V           VLYT
Sbjct:    9 GAAASSGYSKLPYDEGSDDD---NDYIRNHVRRQQKQLAQQDEHLEELGTAVERLGDMSLKIGDEIADQNKLISAIDNDLADASDRLDMITRKTKELVAKSGGTKWFILIVVLSIILFVLLLLVLYT 132          
BLAST of Ec-27_006300.1 vs. uniprot
Match: K3X1D9_GLOUD (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1D9_GLOUD)

HSP 1 Score: 91.3 bits (225), Expect = 8.030e-21
Identity = 47/111 (42.34%), Postives = 76/111 (68.47%), Query Frame = 0
Query:   25 TAEKVDYSRLPNEAGPGDDGEGDDWIQRQIRGHKSQMEHQDAHLSEIGQTASRLGNISLEISKELDQQNKMLENVNTDFEEAIGGLDAVTKKTQELIKKSGGMRNFLIILV 135
            + +  +Y+++ N+     DGE DD++QR+    + + E QD  L ++     RLG++SL IS ELD QN ML+++N + ++A   L AVTKKT+ELI++SGGM+NF++I+V
Sbjct:    7 SGKPANYAKISNDP----DGEEDDYVQRERNQQQVEREKQDESLDQLHTAVKRLGDMSLSISTELDSQNAMLDDLNEETDKASEALQAVTKKTKELIEQSGGMKNFVVIIV 113          
BLAST of Ec-27_006300.1 vs. uniprot
Match: A0A225UWR2_9STRA (t-SNARE coiled-coil homology domain-containing protein n=17 Tax=Phytophthora TaxID=4783 RepID=A0A225UWR2_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.650e-20
Identity = 49/103 (47.57%), Postives = 70/103 (67.96%), Query Frame = 0
Query:   31 YSRLPNEAGPGDDGEGDDWIQRQIRGHKSQMEHQDAHLSEIGQTASRLGNISLEISKELDQQNKMLENVNTDFEEAIGGLDAVTKKTQELIKKSGGMRNFLII 133
            Y++L NE    DD   DD++  Q R  + + + QD  L E+     RLG++SL IS ELD QNKML+++N D ++A   L+ VTK+TQELIK+SGGM+NF++I
Sbjct:   13 YAKLGNEP---DDHADDDYVGEQRRSQQIERQKQDESLDELHSAVKRLGDMSLNISSELDTQNKMLDDLNDDTDKAKQALEIVTKQTQELIKQSGGMKNFIVI 112          
BLAST of Ec-27_006300.1 vs. uniprot
Match: A0A3M6VA46_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VA46_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 3.210e-20
Identity = 48/104 (46.15%), Postives = 71/104 (68.27%), Query Frame = 0
Query:   31 YSRLPNEAGPGDDGEGDDWIQRQIRGHKSQMEHQDAHLSEIGQTASRLGNISLEISKELDQQNKMLENVNTDFEEAIGGLDAVTKKTQELIKKSGGMRNFLIIL 134
            Y++L NE+    D   DD++  Q R  + + + QD +L E+     RLG+ISL IS ELD QNKML++++ D ++A   L+ VTK+TQ LIK+SGGM+NFL+I+
Sbjct:   13 YAKLGNES----DDHDDDYVTDQYRAQQVERQKQDENLDELHSAVKRLGDISLNISSELDTQNKMLDDLSDDTDKAKQALEVVTKQTQALIKQSGGMKNFLVII 112          
BLAST of Ec-27_006300.1 vs. uniprot
Match: A0A6U3VYT5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3VYT5_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 7.130e-20
Identity = 45/90 (50.00%), Postives = 65/90 (72.22%), Query Frame = 0
Query:   45 EGDDWIQRQIRGHKSQMEHQDAHLSEIGQTASRLGNISLEISKELDQQNKMLENVNTDFEEAIGGLDAVTKKTQELIKKSGGMRNFLIIL 134
            EGDD+IQ+QIR  + Q++ QD  L  + Q+A RL  +SL IS+EL  QNKM++ +  D ++A   ++ VT KT++LIKKSGG +NFLII+
Sbjct:   27 EGDDFIQQQIRSQRQQLKEQDHGLEMLSQSADRLAQVSLGISEELGHQNKMIDEMENDLDKATTNINYVTAKTRDLIKKSGGKKNFLIIV 116          
BLAST of Ec-27_006300.1 vs. uniprot
Match: A0A8K1FI73_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FI73_PYTOL)

HSP 1 Score: 90.9 bits (224), Expect = 9.310e-20
Identity = 50/107 (46.73%), Postives = 75/107 (70.09%), Query Frame = 0
Query:   30 DYSRLPNEAGPGDDGEG-DDWIQRQIRGHKSQMEHQDAHLSEIGQTASRLGNISLEISKELDQQNKMLENVNTDFEEAIGGLDAVTKKTQELIKKSGGMRNFLIILV 135
            DYS++ NEA   DD  G DD+++ Q    +++ + QD  L ++     R+G++SL IS EL+ QN ML+++N D ++A   L AVTKKTQELIK+SGGM+NF++I+V
Sbjct:   12 DYSKINNEA---DDSPGEDDYVRNQRSLQQAERQKQDESLDQLHVAVKRIGDMSLTISSELETQNSMLDDLNEDTDKANDALQAVTKKTQELIKQSGGMKNFIVIIV 115          
The following BLAST results are available for this feature:
BLAST of Ec-27_006300.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAV1_ECTSI4.950e-91100.00Similar to syntaxin n=1 Tax=Ectocarpus siliculosus... [more]
A0A835YWI7_9STRA6.930e-3550.67t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S4IM31_9STRA2.090e-2239.10Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2P3Q0_9STRA6.070e-2242.50Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2V0G4_9STRA4.470e-2138.58Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
K3X1D9_GLOUD8.030e-2142.34t-SNARE coiled-coil homology domain-containing pro... [more]
A0A225UWR2_9STRA1.650e-2047.57t-SNARE coiled-coil homology domain-containing pro... [more]
A0A3M6VA46_9STRA3.210e-2046.15t-SNARE coiled-coil homology domain-containing pro... [more]
A0A6U3VYT5_9STRA7.130e-2050.00Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A8K1FI73_PYTOL9.310e-2046.73Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 86..106
NoneNo IPR availableGENE3D1.20.5.110coord: 58..120
e-value: 1.3E-14
score: 55.9
NoneNo IPR availablePANTHERPTHR12791:SF47coord: 48..150
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 130..149
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..129
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 150..150
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 57..120
NoneNo IPR availableTMHMMTMhelixcoord: 130..149
IPR000727Target SNARE coiled-coil homology domainSMARTSM00397tSNARE_6coord: 53..120
e-value: 1.1E-4
score: 31.5
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 58..120
score: 13.378
IPR039897BET1-like proteinPANTHERPTHR12791GOLGI SNARE BET1-RELATEDcoord: 48..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:5825603..5832173 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_006300.1Ec-27_006300.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_27 5825603..5832173 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-27_006300.1 ID=Ec-27_006300.1|Name=Ec-27_006300.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=151bp
MNDWKAPIGRGAGGGSRNYGGPNGTAEKVDYSRLPNEAGPGDDGEGDDWI
QRQIRGHKSQMEHQDAHLSEIGQTASRLGNISLEISKELDQQNKMLENVN
TDFEEAIGGLDAVTKKTQELIKKSGGMRNFLIILVLIAILAVLVVLVLYT
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom
IPR039897BET1