Ec-27_006240.2 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ec-27_006240.2
Unique Name	Ec-27_006240.2
Type	polypeptide
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	247

Homology

The following BLAST results are available for this feature:

BLAST of Ec-27_006240.2 vs. uniprot

BLAST of Ec-27_006240.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 194..220
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 246..246
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..193
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 226..245
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 221..225

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_27	contig	chr_27:5777834..5778574 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-27_006240.2	Ec-27_006240.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	mRNA	chr_27 5777772..5783407 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ec-27_006240.2 ID=Ec-27_006240.2|Name=Ec-27_006240.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=247bp
MNLLPFGPRRCSGAPPPQRPPLPPMAENQDLRLESLALVCAALPSPQQPN
LQNEYPSSKDSRKPERTYKATATASTVPPHSSSTSWAGSGRLSPLSLGSA
QKPTSTKTLPCGDVNSEVMLPAAEAPAVVGAASAVASVVDSPACGGCSGG
TGNSRNSLSQGSRRNIARPFDYARAPGYGRLSPMREATTCRRDGSFAAAA
ASAAATAAASASAAAFFSAALVKLRLLRSISSCFRLFSSAFFLIAS*