Ec-27_006130.2 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-27_006130.2
Unique NameEc-27_006130.2
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length578
Homology
BLAST of Ec-27_006130.2 vs. uniprot
Match: A0A6H5JT04_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT04_9PHAE)

HSP 1 Score: 867 bits (2241), Expect = 1.180e-313
Identity = 458/500 (91.60%), Postives = 463/500 (92.60%), Query Frame = 0
Query:   78 EAFASFPFDATASLVRRKGSGTRPPVGWEVKSSQQLAASLRHPDPGAPGTTTPFGRDAAADCQAGALVAGQAQRRSGGGDIAGFRKVVPAGAGAVGSMETRECKAAAGAVRSPKSGDTLHMLAPPSDIGLVGRGGARGVFGTARIASSDARAAAAAAAEGQCVEDVVESGHAGPVLLLGRTKTKPLSPGPSHSTRGPHAHGENGEKHLEGGELGESLGKHDHFSACHRHRHXXXXXFHQHLSQEMKVCSSWTGSAQTDAPSIGSDDDNDDTAVRLRCGSGGSNCCSETAHVDSKACAKGAAALFVTEQQLATKAEAEVLPFSPLAERQNSAAVVSAVVSGADGSARANDETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWIRGHPSCPYCKGDLNVIPQENNSSHETTAICYACSVLSRMVSFVAGPFVRFFRGLWERRRQQREQTAEGGGDREAGEGNEAAEGVVRFAPPALDSPAATPVPPSVVAA 577
            +AFASFPFDATASLVRRKGSGTRPPVGWEVKSSQQLAASLRHPDPG+PGTTTPFGRD    C+AGALVAGQAQRRSGGGDI G RKVVPAGAGAVGSMETRE KAAAGAVRSPK GDTLHMLAPPSDIG VGRGGARG FGTARIASSDA A AAA AEGQCVEDVVESGHAGPVLLLGRTKTKPLSPGP HS  GPHAHGENGEKHLE GELGESLGKHDHF ACHR   XXX  FHQHLSQEMKV SSWTGSAQTDAPSIGSDDDNDDTAVRLRCGSGGSNCCSETAHVDSKACAKGAAAL VTEQQLATKA AEVLP SPLAE QNSAA VS VVSGADGSARANDETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWI GHPSCPYCKGDLNVIPQENNSS ETTAICYACSVLS MVSFV GP VRFFRG+WERRRQQREQTAEGGGDREAGEGNEAAEGVV FAPPAL+S AATPVPPSVVAA
Sbjct:   56 QAFASFPFDATASLVRRKGSGTRPPVGWEVKSSQQLAASLRHPDPGSPGTTTPFGRDPGGGCRAGALVAGQAQRRSGGGDITGCRKVVPAGAGAVGSMETRESKAAAGAVRSPKIGDTLHMLAPPSDIGQVGRGGARGAFGTARIASSDAGATAAATAEGQCVEDVVESGHAGPVLLLGRTKTKPLSPGPCHSADGPHAHGENGEKHLEVGELGESLGKHDHFLACHRXXXXXXRPFHQHLSQEMKVSSSWTGSAQTDAPSIGSDDDNDDTAVRLRCGSGGSNCCSETAHVDSKACAKGAAALLVTEQQLATKAGAEVLPLSPLAEHQNSAAAVSVVVSGADGSARANDETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWICGHPSCPYCKGDLNVIPQENNSSSETTAICYACSVLSGMVSFVTGPLVRFFRGIWERRRQQREQTAEGGGDREAGEGNEAAEGVVSFAPPALESSAATPVPPSVVAA 555          
BLAST of Ec-27_006130.2 vs. uniprot
Match: D8LAX1_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAX1_ECTSI)

HSP 1 Score: 861 bits (2224), Expect = 1.330e-312
Identity = 460/531 (86.63%), Postives = 460/531 (86.63%), Query Frame = 0
Query:   47 MVAVVSQGYLCAIFVSIPPDPKPRGVTQINREAFASFPFDATASLVRRKGSGTRPPVGWEVKSSQQLAASLRHPDPGAPGTTTPFGRDAAADCQAGALVAGQAQRRSGGGDIAGFRKVVPAGAGAVGSMETRECKAAAGAVRSPKSGDTLHMLAPPSDIGLVGRGGARGVFGTARIASSDARAAAAAAAEGQCVEDVVESGHAGPVLLLGRTKTKPLSPGPSHSTRGPHAHGENGEKHLEGGELGESLGKHDHFSACHRHRHXXXXXFHQHLSQEMKVCSSWTGSAQTDAPSIGSDDDNDDTAVRLRCGSGGSNCCSETAHVDSKACAKGAAALFVTEQQLATKAEAEVLPFSPLAERQNSAAVVSAVVSGADGSARANDETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWIRGHPSCPYCKGDLNVIPQENNSSHETTAICYACSVLSRMVSFVAGPFVRFFRGLWERRRQQREQTAEGGGDREAGEGNEAAEGVVRFAPPALDSPAATPVPPSVVAA 577
            MVAVVSQGYLCAIFVSIPPDPKPRGVTQINREAFASFPFDATASLVRRKGSGTRPPVGWEVKSSQQLAASLRHPDPGAPGTTTPFGRDAAADCQAGALVAGQAQRRSGGGDIAGFRKVVPAGAGAVGSMETRECKAAAGAVRSPKSGDTLHMLAPPSDIGLVGRGGARGVFGTARIASSDARAAAAAAAEGQCVEDVVESGHAGPVLLLGRTKTKPLSPGPSHSTRGPHAHGENGEKHLEGGELGESLGKHDHFSACHRHRH XXXXFHQHLSQEMKVCSSWTGSAQTDAPSIGSDDDNDDTAVRLR                                                                      ANDETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWIRGHPSCPYCKGDLNVIPQENNSSHETTAICYACSVLSRMVSFVAGPFVRFFRGLWERRRQQREQTAEGGGDREAGEGNEAAEGVVRFAPPALDSPAATPVPPSVVAA
Sbjct:    1 MVAVVSQGYLCAIFVSIPPDPKPRGVTQINREAFASFPFDATASLVRRKGSGTRPPVGWEVKSSQQLAASLRHPDPGAPGTTTPFGRDAAADCQAGALVAGQAQRRSGGGDIAGFRKVVPAGAGAVGSMETRECKAAAGAVRSPKSGDTLHMLAPPSDIGLVGRGGARGVFGTARIASSDARAAAAAAAEGQCVEDVVESGHAGPVLLLGRTKTKPLSPGPSHSTRGPHAHGENGEKHLEGGELGESLGKHDHFSACHRHRHCXXXXFHQHLSQEMKVCSSWTGSAQTDAPSIGSDDDNDDTAVRLR----------------------------------------------------------------------ANDETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWIRGHPSCPYCKGDLNVIPQENNSSHETTAICYACSVLSRMVSFVAGPFVRFFRGLWERRRQQREQTAEGGGDREAGEGNEAAEGVVRFAPPALDSPAATPVPPSVVAA 461          
BLAST of Ec-27_006130.2 vs. uniprot
Match: A0A836CLU7_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLU7_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 2.050e-12
Identity = 34/71 (47.89%), Postives = 44/71 (61.97%), Query Frame = 0
Query:  428 TVVRVSELPDVCAICLGQYATGEEVHVLPC--LHIFHAECLDVWIRGHPSCPYCKGDLNVIPQENNSSHET 496
            T V  SEL   C ICLG Y TGE +  LPC   H++H EC+++W+ GH +CPYCK DL +  +E  S   T
Sbjct:   64 TAVATSELQ--CVICLGDYTTGESLCRLPCPFQHVYHVECINLWLDGHSTCPYCKYDLMLAAEEEQSPSAT 132          
BLAST of Ec-27_006130.2 vs. uniprot
Match: A0A8C3ZMD8_9TELE (RING-type domain-containing protein n=1 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C3ZMD8_9TELE)

HSP 1 Score: 72.8 bits (177), Expect = 3.490e-12
Identity = 27/45 (60.00%), Postives = 35/45 (77.78%), Query Frame = 0
Query:  439 CAICLGQYATGEEVHVLPCLHIFHAECLDVWIRGHPSCPYCKGDL 483
            C ICL +Y  GEE+ VLPCLH FHAEC+D W++ +PSCP C+ D+
Sbjct:   47 CRICLCEYTAGEELRVLPCLHDFHAECVDRWLQQNPSCPICRADV 91          
BLAST of Ec-27_006130.2 vs. uniprot
Match: A0A5E4F3R2_PRUDU (RING-type E3 ubiquitin transferase n=2 Tax=Prunus TaxID=3754 RepID=A0A5E4F3R2_PRUDU)

HSP 1 Score: 73.9 bits (180), Expect = 7.210e-12
Identity = 29/67 (43.28%), Postives = 46/67 (68.66%), Query Frame = 0
Query:  424 ANDETVVRVSELPD-VCAICLGQYATGEEVHVLP-CLHIFHAECLDVWIRGHPSCPYCKGDLNVIPQ 488
            A+ + +  V E+ D +CA+CL ++  GE + VLP C+H+FHAEC+D+W+  H +CP C+ D+   PQ
Sbjct:   73 AHHQLIPTVEEIKDGICAVCLCEFKDGEAIRVLPECMHLFHAECIDMWLSSHSNCPLCRTDIEPPPQ 139          
BLAST of Ec-27_006130.2 vs. uniprot
Match: A0A251NVP6_PRUPE (RING-type E3 ubiquitin transferase n=4 Tax=Prunus TaxID=3754 RepID=A0A251NVP6_PRUPE)

HSP 1 Score: 73.9 bits (180), Expect = 7.560e-12
Identity = 29/67 (43.28%), Postives = 46/67 (68.66%), Query Frame = 0
Query:  424 ANDETVVRVSELPD-VCAICLGQYATGEEVHVLP-CLHIFHAECLDVWIRGHPSCPYCKGDLNVIPQ 488
            A+ + +  V E+ D +CA+CL ++  GE + VLP C+H+FHAEC+D+W+  H +CP C+ D+   PQ
Sbjct:   75 AHHQLIPTVEEIKDGICAVCLCEFKDGEAIRVLPECMHLFHAECIDMWLSSHSNCPLCRTDIEPPPQ 141          
BLAST of Ec-27_006130.2 vs. uniprot
Match: A0A4Y1RQH7_PRUDU (RING-type E3 ubiquitin transferase n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RQH7_PRUDU)

HSP 1 Score: 72.8 bits (177), Expect = 8.650e-12
Identity = 28/64 (43.75%), Postives = 44/64 (68.75%), Query Frame = 0
Query:  427 ETVVRVSELPD-VCAICLGQYATGEEVHVLP-CLHIFHAECLDVWIRGHPSCPYCKGDLNVIPQ 488
            + +  V E+ D +CA+CL ++  GE + VLP C+H+FHAEC+D+W+  H +CP C+ D+   PQ
Sbjct:   46 QLIPTVEEIKDGICAVCLCEFKDGEAIRVLPECMHLFHAECIDMWLSSHSNCPLCRTDIEPPPQ 109          
BLAST of Ec-27_006130.2 vs. uniprot
Match: UPI000C1CE394 (RING-H2 finger protein ATL8-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CE394)

HSP 1 Score: 74.7 bits (182), Expect = 1.010e-11
Identity = 33/56 (58.93%), Postives = 41/56 (73.21%), Query Frame = 0
Query:  431 RVSELPDVCAICLGQYATGEEVHVLP-CLHIFHAECLDVWIRGHPSCPYCKGDLNV 485
            RV +L D CAIC+ ++A GEEV VLP C HIFH EC+D W+R H SCP C+ +L V
Sbjct:  101 RVEKLAD-CAICMAEFAAGEEVRVLPQCRHIFHVECVDTWLRSHSSCPSCRENLVV 155          
BLAST of Ec-27_006130.2 vs. uniprot
Match: D8LS07_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS07_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 1.430e-11
Identity = 29/57 (50.88%), Postives = 40/57 (70.18%), Query Frame = 0
Query:  429 VVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWIRGHPSCPYCKGDLNV 485
            V+R SEL   C++CL  Y   E V +LPC H++H EC+D+W+R H  CPYC+ D+NV
Sbjct:  312 VIRASELNASCSVCLFGYFVDEAVTLLPCGHLYHTECIDIWMRDHVDCPYCRADMNV 368          
BLAST of Ec-27_006130.2 vs. uniprot
Match: A0A1E5VXG3_9POAL (RING-type domain-containing protein n=1 Tax=Dichanthelium oligosanthes TaxID=888268 RepID=A0A1E5VXG3_9POAL)

HSP 1 Score: 73.6 bits (179), Expect = 4.350e-11
Identity = 48/140 (34.29%), Postives = 70/140 (50.00%), Query Frame = 0
Query:  350 VRLRCGSGGSNCCSETAHVDSKACAKGAAALFVTEQQLATKAEAEVLPFSPLAERQNSAAVVSAVVSGADGSARANDETVVRVSELPDVCAICLGQYATGEEVHVLP-CLHIFHAECLDVWIRGHPSCPYCKGDLNVIPQ 488
            +RL C      C +   H +S+    GA   F+ + Q A  +   VLP  P        A V AV        +  +E   R   LP+ CA+CLG+  TGE V  LP CLH+FH +C+D W+R H +CP C+ ++  +P+
Sbjct:   96 LRLPC-----RCAARLRHRNSRGGGSGALPQFMVQGQAAGLSSIYVLPREPPVR---GGARVVAVDDLPAYEQQQQEEDAKRPDGLPE-CAVCLGEVETGEMVKRLPGCLHMFHQQCIDPWLREHSTCPVCRYNVLTVPE 226          
The following BLAST results are available for this feature:
BLAST of Ec-27_006130.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JT04_9PHAE1.180e-31391.60RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LAX1_ECTSI1.330e-31286.63RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A836CLU7_9STRA2.050e-1247.89RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A8C3ZMD8_9TELE3.490e-1260.00RING-type domain-containing protein n=1 Tax=Dentic... [more]
A0A5E4F3R2_PRUDU7.210e-1243.28RING-type E3 ubiquitin transferase n=2 Tax=Prunus ... [more]
A0A251NVP6_PRUPE7.560e-1243.28RING-type E3 ubiquitin transferase n=4 Tax=Prunus ... [more]
A0A4Y1RQH7_PRUDU8.650e-1243.75RING-type E3 ubiquitin transferase n=1 Tax=Prunus ... [more]
UPI000C1CE3941.010e-1158.93RING-H2 finger protein ATL8-like n=1 Tax=Olea euro... [more]
D8LS07_ECTSI1.430e-1150.88RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A1E5VXG3_9POAL4.350e-1134.29RING-type domain-containing protein n=1 Tax=Dichan... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 439..479
e-value: 4.7E-6
score: 36.1
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 438..480
e-value: 2.2E-12
score: 47.1
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 439..480
score: 12.106
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 402..486
e-value: 2.4E-16
score: 61.2
NoneNo IPR availablePANTHERPTHR14155:SF202coord: 374..483
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 374..483
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 62..504
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 25..35
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 526..577
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 505..525
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 36..61
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 432..487
NoneNo IPR availableTMHMMTMhelixcoord: 37..59
NoneNo IPR availableTMHMMTMhelixcoord: 5..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:5700275..5705258 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_006130.2Ec-27_006130.2Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_27 5699126..5705386 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-27_006130.2 ID=Ec-27_006130.2|Name=Ec-27_006130.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=578bp
MSWAAVMLFGSGLIFSTGLVWFFVQAWIFAIEAQTVWLIILLTVTTMVAV
VSQGYLCAIFVSIPPDPKPRGVTQINREAFASFPFDATASLVRRKGSGTR
PPVGWEVKSSQQLAASLRHPDPGAPGTTTPFGRDAAADCQAGALVAGQAQ
RRSGGGDIAGFRKVVPAGAGAVGSMETRECKAAAGAVRSPKSGDTLHMLA
PPSDIGLVGRGGARGVFGTARIASSDARAAAAAAAEGQCVEDVVESGHAG
PVLLLGRTKTKPLSPGPSHSTRGPHAHGENGEKHLEGGELGESLGKHDHF
SACHRHRHCHRRHFHQHLSQEMKVCSSWTGSAQTDAPSIGSDDDNDDTAV
RLRCGSGGSNCCSETAHVDSKACAKGAAALFVTEQQLATKAEAEVLPFSP
LAERQNSAAVVSAVVSGADGSARANDETVVRVSELPDVCAICLGQYATGE
EVHVLPCLHIFHAECLDVWIRGHPSCPYCKGDLNVIPQENNSSHETTAIC
YACSVLSRMVSFVAGPFVRFFRGLWERRRQQREQTAEGGGDREAGEGNEA
AEGVVRFAPPALDSPAATPVPPSVVAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD