Ec-27_005650.2 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ec-27_005650.2
Unique Name	Ec-27_005650.2
Type	polypeptide
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	621

Homology

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BLAST of Ec-27_005650.2 vs. uniprot
Match: D8LB13_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB13_ECTSI)

HSP 1 Score: 956 bits (2472), Expect = 0.000e+0
Identity = 541/674 (80.27%), Postives = 554/674 (82.20%), Query Frame = 0

Query:   36 WRSMLLLVAGHQVLRVSGTSSSSGCTSVTVSGVGLSSGTYRELSSTSYYYAAGVDYHELYLSDGAWYIIPAIADYPRYRTYDEVAHPSDITLGWSECDVQFCDYVEMSTAVTVTCAVSSSSAS-----------------------------------------------------------------------------------------EATTSTCTSITISNFGDFSGTYREVAGTSSYDELFYMAGGTDYYYVYLSGGAWFIQPNVVDYPKYRTYDDAAHPADITQSWAECDNTYCDYVEVATSMAITCAADTINTTASTCTSIAISGLGDFSGTYREIAGTSSYDELYYMAGGTDYYYVYLSNSAWYISPNVVDYPKYRTYDDAGHPADITLGWAECDNASCDWDEPATASFNVTCADTVTATASTCTNVVLSDFGDFSGTYAEVADTSYDKQYSMATGVETYSIYLNNDAWNVQPLEAEYPRYRTYDDASNPADITLEWVECDNSYCDFDIPSPSPIVITCSGGSSSSDVLPTPSPAGVTDGTXXXXXXXXXXXXXXXXXXXXTEGPLPRGVSAPSSSATSTYEPSGSSSDPDAPTAGNSTDEPGTGDAANIEMDDDGDXXXXXXXXXGAIAAISAVVLAVVGGGLGVAFKHNNIHCCQTTHFSSSA 620
            WR++     G      +  S + GCTSVTVSGVGLSSGTYRELSSTSYYYAAGVDYHELYLSDGAWYIIPAIADYPRYRTYDEVAHPSDITLGWSECDVQFCDYVEMSTAVTVTCA + +S +                                                                                            T+TCT+I +S+ G +SGTYREVAGTSSYDELFYMAGGTDYYYVYLSGGAWFIQPNVVDYPKYRTYDDAAHPADITQSWAECDNTYCDYVEVATSMAITCAA       +TCTSIAISGLGDFSGTYREIAGTSSYDELYYMAGGTDYYYVYLSNSAWYISPNVVDYPKYRTYDDAGHPADITLGWAECDNASCDWDEPATASFNVTCADTVTATASTCTNVVLSDFGDFSGTYAEVADTSYDKQYSMATGVETYSIYLNNDAWNVQPLEAEYPRYRTYDDASNPADITLEWVECDNSYCDFDIPSPSPIVITCSGGSSSSDVLPTPSPAGVTDGTXXXXXXXXXXXXXXXXXXXXTEGPLPRGVSAPSSSATSTYEPSGSSSDPDAPTAGNSTDEPGTGDAANIEMDDDGDXXXXXXXXXGAIAAISAVVLAVVGGGLGVAFKHNNIHCCQTTHFSSSA
Sbjct:   11 WRAVEKDRKGTTDKTTNALSDTPGCTSVTVSGVGLSSGTYRELSSTSYYYAAGVDYHELYLSDGAWYIIPAIADYPRYRTYDEVAHPSDITLGWSECDVQFCDYVEMSTAVTVTCAATCTSITISNFGDFSGTYREVAGTSSYDELFYMAAGSEYYYVYLSGGAWFIQPNVADYPKYRTYDDAAHPADITQSWAECEAQFCDYVEIATTMTITCATATCTNIAVSDLGSYSGTYREVAGTSSYDELFYMAGGTDYYYVYLSGGAWFIQPNVVDYPKYRTYDDAAHPADITQSWAECDNTYCDYVEVATSMAITCAA-------ATCTSIAISGLGDFSGTYREIAGTSSYDELYYMAGGTDYYYVYLSNSAWYISPNVVDYPKYRTYDDAGHPADITLGWAECDNASCDWDEPATASFNVTCADTVTATASTCTNVVLSDFGDFSGTYAEVADTSYDKQYSMATGVETYSIYLNNDAWNVQPLEAEYPRYRTYDDASNPADITLEWVECDNSYCDFDIPSPSPIVITCSGGSSSSDVLPTPSPAGVTDGTXXXXXXXXXXXXXXXXXXXXTEGPLPRGVSAPSSSATSTYEPSGSSSDPDAPTAGNSTDEPGTGDAANIEMDDDGDXXXXXXXXXGAIAAISAVVLAVVGGGLGVAFKHNNIHCCQTTHFSSSA 677

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BLAST of Ec-27_005650.2 vs. uniprot
Match: A0A6H5JRD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRD4_9PHAE)

HSP 1 Score: 411 bits (1056), Expect = 5.070e-137
Identity = 210/289 (72.66%), Postives = 235/289 (81.31%), Query Frame = 0

Query:   60 CTSVTVSGVGLSSGTYRELSSTS-----YYYAAGVDYHELYLSDGAWYIIPAIADYPRYRTYDEVAHPSDITLGWSECDVQFCDYVEMSTAVTVTCAVS------------SSSASEATTSTCTSITISNFGDFSGTYREVAGTSSYDELFYMAGGTDYYYVYLSGGAWFIQPNVVDYPKYRTYDDAAHPADITQSWAECDNTYCDYVEVATSMAITCAADTINTTASTCTSIAISGLGDFSGTYREIAGTSSYDELYYMAGGTDYYYVYLSNSAWYISPNVVDYPKYR 331
            CTSVT+S  G  SGTYRE++ TS     YY AAG +Y+ +YLS GAWYI P + DYP+YRTYD+ AHP+DIT  WSECD QFCDYVE++T +T+TCA +            S + S  T +TCT+I +S+ G +SGTYREVAGTSSY+ELFYMAGGTDYYYVYLS  AW+I PNVVDYPKYRTYDDAAHPADITQSWAECDN YCDYVEVATSMAITCAA       +TCTSIAISGLGDFSGTYREIAGTSSYDELYYMAGGTDYYYVYL+NSAWYISPNVVDYPKYR
Sbjct:    7 CTSVTISNFGEFSGTYREIAGTSSYDELYYMAAGSEYYYVYLSGGAWYIQPNVVDYPKYRTYDDAAHPADITQSWSECDAQFCDYVEITTTMTITCATAWLFLSHPRAACVSVAKSVKTAATCTNIAVSDLGSYSGTYREVAGTSSYEELFYMAGGTDYYYVYLSNSAWYISPNVVDYPKYRTYDDAAHPADITQSWAECDNVYCDYVEVATSMAITCAA-------ATCTSIAISGLGDFSGTYREIAGTSSYDELYYMAGGTDYYYVYLANSAWYISPNVVDYPKYR 288

[Close]

BLAST of Ec-27_005650.2 vs. uniprot
Match: A0A6H5JUT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUT7_9PHAE)

HSP 1 Score: 196 bits (499), Expect = 7.200e-56
Identity = 92/99 (92.93%), Postives = 95/99 (95.96%), Query Frame = 0

Query:  378 TCTNVVLSDFGDFSGTYAEVADTSYDKQYSMATGVETYSIYLNNDAWNVQPLEAEYPRYRTYDDASNPADITLEWVECDNSYCDFDIPSPSPIVITCSG 476
            TCT VVLSDFGDFSGTYAEVADTSYDKQYSMA GVETYSIYL+N AWN+QP+EA YPRYRTYDDASNPADITLEWVECDNSYCDFDIPSPSPIVITCSG
Sbjct:   84 TCTKVVLSDFGDFSGTYAEVADTSYDKQYSMAAGVETYSIYLDNGAWNMQPIEAVYPRYRTYDDASNPADITLEWVECDNSYCDFDIPSPSPIVITCSG 182

The following BLAST results are available for this feature:

BLAST of Ec-27_005650.2 vs. uniprot

BLAST of Ec-27_005650.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D8LB13_ECTSI	0.000e+0	80.27	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JRD4_9PHAE	5.070e-137	72.66	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JUT7_9PHAE	7.200e-56	92.93	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 604..620
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..50
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..37
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 46..50
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 38..45
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 51..582
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 583..603
None	No IPR available	TMHMM	TMhelix		coord: 581..603

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_27	contig	chr_27:5181077..5195771 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-27_005650.2	Ec-27_005650.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	mRNA	chr_27 5179649..5196000 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ec-27_005650.2 ID=Ec-27_005650.2|Name=Ec-27_005650.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=621bp
MGYLKRASSEIHSRRPARVGGSIHMAWRSSMRALGWRSMLLLVAGHQVLR
VSGTSSSSGCTSVTVSGVGLSSGTYRELSSTSYYYAAGVDYHELYLSDGA
WYIIPAIADYPRYRTYDEVAHPSDITLGWSECDVQFCDYVEMSTAVTVTC
AVSSSSASEATTSTCTSITISNFGDFSGTYREVAGTSSYDELFYMAGGTD
YYYVYLSGGAWFIQPNVVDYPKYRTYDDAAHPADITQSWAECDNTYCDYV
EVATSMAITCAADTINTTASTCTSIAISGLGDFSGTYREIAGTSSYDELY
YMAGGTDYYYVYLSNSAWYISPNVVDYPKYRTYDDAGHPADITLGWAECD
NASCDWDEPATASFNVTCADTVTATASTCTNVVLSDFGDFSGTYAEVADT
SYDKQYSMATGVETYSIYLNNDAWNVQPLEAEYPRYRTYDDASNPADITL
EWVECDNSYCDFDIPSPSPIVITCSGGSSSSDVLPTPSPAGVTDGTGGSS
SSDTLLTPSPTGVAETTEGPLPRGVSAPSSSATSTYEPSGSSSDPDAPTA
GNSTDEPGTGDAANIEMDDDGDDSGGDDLSSGAIAAISAVVLAVVGGGLG
VAFKHNNIHCCQTTHFSSSA*