Ec-27_005650.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ec-27_005650.1
Unique Name	Ec-27_005650.1
Type	polypeptide
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	728

Homology

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BLAST of Ec-27_005650.1 vs. uniprot
Match: D8LB13_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB13_ECTSI)

HSP 1 Score: 1189 bits (3077), Expect = 0.000e+0
Identity = 645/692 (93.21%), Postives = 651/692 (94.08%), Query Frame = 0

Query:   36 WRSMLLLVAGHQVLRVSGTSSSSGCTSVTVSGVGLSSGTYRELSSTSYYYAAGVDYHELYLSDGAWYIIPAIADYPRYRTYDEVAHPSDITLGWSECDVQFCDYVEMSTAVTVTCAVSSSSASEATTSTCTSITISNFGDFSGTYREVAGTSSYDELFYMAAGSEYYYVYLSGGAWFIQPNVADYPKYRTYDDAAHPADITQSWAECEAQFCDYVEIATTMTITCATDTNSTIASTCTNIAVSDLGSYSGTYREVAGTSSYDELFYMAGGTDYYYVYLSGGAWFIQPNVVDYPKYRTYDDAAHPADITQSWAECDNTYCDYVEVATSMAITCAADTINTTASTCTSIAISGLGDFSGTYREIAGTSSYDELYYMAGGTDYYYVYLSNSAWYISPNVVDYPKYRTYDDAGHPADITLGWAECDNASCDWDEPATASFNVTCADTVTATASTCTNVVLSDFGDFSGTYAEVADTSYDKQYSMATGVETYSIYLNNDAWNVQPLEAEYPRYRTYDDASNPADITLEWVECDNSYCDFDIPSPSPIVITCSGGSSSSDVLPTPSPAGVTDGTXXXXXXXXXXXXXXXXXXXXTEGPLPRGVSAPSSSATSTYEPSGSSSDPDAPTAGNSTDEPGTGDAANIEMDDDGDXXXXXXXXXGAIAAISAVVLAVVGGGLGVAFKHNNIHCCQTTHFSSSA 727
            WR++     G      +  S + GCTSVTVSGVGLSSGTYRELSSTSYYYAAGVDYHELYLSDGAWYIIPAIADYPRYRTYDEVAHPSDITLGWSECDVQFCDYVEMSTAVTVTCA            TCTSITISNFGDFSGTYREVAGTSSYDELFYMAAGSEYYYVYLSGGAWFIQPNVADYPKYRTYDDAAHPADITQSWAECEAQFCDYVEIATTMTITCAT       +TCTNIAVSDLGSYSGTYREVAGTSSYDELFYMAGGTDYYYVYLSGGAWFIQPNVVDYPKYRTYDDAAHPADITQSWAECDNTYCDYVEVATSMAITCAA       +TCTSIAISGLGDFSGTYREIAGTSSYDELYYMAGGTDYYYVYLSNSAWYISPNVVDYPKYRTYDDAGHPADITLGWAECDNASCDWDEPATASFNVTCADTVTATASTCTNVVLSDFGDFSGTYAEVADTSYDKQYSMATGVETYSIYLNNDAWNVQPLEAEYPRYRTYDDASNPADITLEWVECDNSYCDFDIPSPSPIVITCSGGSSSSDVLPTPSPAGVTDGTXXXXXXXXXXXXXXXXXXXXTEGPLPRGVSAPSSSATSTYEPSGSSSDPDAPTAGNSTDEPGTGDAANIEMDDDGDXXXXXXXXXGAIAAISAVVLAVVGGGLGVAFKHNNIHCCQTTHFSSSA
Sbjct:   11 WRAVEKDRKGTTDKTTNALSDTPGCTSVTVSGVGLSSGTYRELSSTSYYYAAGVDYHELYLSDGAWYIIPAIADYPRYRTYDEVAHPSDITLGWSECDVQFCDYVEMSTAVTVTCAA-----------TCTSITISNFGDFSGTYREVAGTSSYDELFYMAAGSEYYYVYLSGGAWFIQPNVADYPKYRTYDDAAHPADITQSWAECEAQFCDYVEIATTMTITCAT-------ATCTNIAVSDLGSYSGTYREVAGTSSYDELFYMAGGTDYYYVYLSGGAWFIQPNVVDYPKYRTYDDAAHPADITQSWAECDNTYCDYVEVATSMAITCAA-------ATCTSIAISGLGDFSGTYREIAGTSSYDELYYMAGGTDYYYVYLSNSAWYISPNVVDYPKYRTYDDAGHPADITLGWAECDNASCDWDEPATASFNVTCADTVTATASTCTNVVLSDFGDFSGTYAEVADTSYDKQYSMATGVETYSIYLNNDAWNVQPLEAEYPRYRTYDDASNPADITLEWVECDNSYCDFDIPSPSPIVITCSGGSSSSDVLPTPSPAGVTDGTXXXXXXXXXXXXXXXXXXXXTEGPLPRGVSAPSSSATSTYEPSGSSSDPDAPTAGNSTDEPGTGDAANIEMDDDGDXXXXXXXXXGAIAAISAVVLAVVGGGLGVAFKHNNIHCCQTTHFSSSA 677

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BLAST of Ec-27_005650.1 vs. uniprot
Match: A0A6H5JRD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRD4_9PHAE)

HSP 1 Score: 484 bits (1247), Expect = 2.250e-164
Identity = 245/291 (84.19%), Postives = 258/291 (88.66%), Query Frame = 0

Query:  163 STCTSITISNFGDFSGTYREVAGTSSYDELFYMAAGSEYYYVYLSGGAWFIQPNVADYPKYRTYDDAAHPADITQSWAECEAQFCDYVEIATTMTITCATD---------------TNSTIASTCTNIAVSDLGSYSGTYREVAGTSSYDELFYMAGGTDYYYVYLSGGAWFIQPNVVDYPKYRTYDDAAHPADITQSWAECDNTYCDYVEVATSMAITCAADTINTTASTCTSIAISGLGDFSGTYREIAGTSSYDELYYMAGGTDYYYVYLSNSAWYISPNVVDYPKYR 438
            STCTS+TISNFG+FSGTYRE+AGTSSYDEL+YMAAGSEYYYVYLSGGAW+IQPNV DYPKYRTYDDAAHPADITQSW+EC+AQFCDYVEI TTMTITCAT                 +   A+TCTNIAVSDLGSYSGTYREVAGTSSY+ELFYMAGGTDYYYVYLS  AW+I PNVVDYPKYRTYDDAAHPADITQSWAECDN YCDYVEVATSMAITCAA       +TCTSIAISGLGDFSGTYREIAGTSSYDELYYMAGGTDYYYVYL+NSAWYISPNVVDYPKYR
Sbjct:    5 STCTSVTISNFGEFSGTYREIAGTSSYDELYYMAAGSEYYYVYLSGGAWYIQPNVVDYPKYRTYDDAAHPADITQSWSECDAQFCDYVEITTTMTITCATAWLFLSHPRAACVSVAKSVKTAATCTNIAVSDLGSYSGTYREVAGTSSYEELFYMAGGTDYYYVYLSNSAWYISPNVVDYPKYRTYDDAAHPADITQSWAECDNVYCDYVEVATSMAITCAA-------ATCTSIAISGLGDFSGTYREIAGTSSYDELYYMAGGTDYYYVYLANSAWYISPNVVDYPKYR 288

[Close]

BLAST of Ec-27_005650.1 vs. uniprot
Match: A0A6H5JUT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUT7_9PHAE)

HSP 1 Score: 196 bits (499), Expect = 3.640e-55
Identity = 92/99 (92.93%), Postives = 95/99 (95.96%), Query Frame = 0

Query:  485 TCTNVVLSDFGDFSGTYAEVADTSYDKQYSMATGVETYSIYLNNDAWNVQPLEAEYPRYRTYDDASNPADITLEWVECDNSYCDFDIPSPSPIVITCSG 583
            TCT VVLSDFGDFSGTYAEVADTSYDKQYSMA GVETYSIYL+N AWN+QP+EA YPRYRTYDDASNPADITLEWVECDNSYCDFDIPSPSPIVITCSG
Sbjct:   84 TCTKVVLSDFGDFSGTYAEVADTSYDKQYSMAAGVETYSIYLDNGAWNMQPIEAVYPRYRTYDDASNPADITLEWVECDNSYCDFDIPSPSPIVITCSG 182

The following BLAST results are available for this feature:

BLAST of Ec-27_005650.1 vs. uniprot

BLAST of Ec-27_005650.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D8LB13_ECTSI	0.000e+0	93.21	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JRD4_9PHAE	2.250e-164	84.19	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JUT7_9PHAE	3.640e-55	92.93	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..50
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..37
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 46..50
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 690..710
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 38..45
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 51..689
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 711..727
None	No IPR available	TMHMM	TMhelix		coord: 688..710

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_27	contig	chr_27:5181077..5195771 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-27_005650.1	Ec-27_005650.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	mRNA	chr_27 5179649..5196000 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ec-27_005650.1 ID=Ec-27_005650.1|Name=Ec-27_005650.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=728bp
MGYLKRASSEIHSRRPARVGGSIHMAWRSSMRALGWRSMLLLVAGHQVLR
VSGTSSSSGCTSVTVSGVGLSSGTYRELSSTSYYYAAGVDYHELYLSDGA
WYIIPAIADYPRYRTYDEVAHPSDITLGWSECDVQFCDYVEMSTAVTVTC
AVSSSSASEATTSTCTSITISNFGDFSGTYREVAGTSSYDELFYMAAGSE
YYYVYLSGGAWFIQPNVADYPKYRTYDDAAHPADITQSWAECEAQFCDYV
EIATTMTITCATDTNSTIASTCTNIAVSDLGSYSGTYREVAGTSSYDELF
YMAGGTDYYYVYLSGGAWFIQPNVVDYPKYRTYDDAAHPADITQSWAECD
NTYCDYVEVATSMAITCAADTINTTASTCTSIAISGLGDFSGTYREIAGT
SSYDELYYMAGGTDYYYVYLSNSAWYISPNVVDYPKYRTYDDAGHPADIT
LGWAECDNASCDWDEPATASFNVTCADTVTATASTCTNVVLSDFGDFSGT
YAEVADTSYDKQYSMATGVETYSIYLNNDAWNVQPLEAEYPRYRTYDDAS
NPADITLEWVECDNSYCDFDIPSPSPIVITCSGGSSSSDVLPTPSPAGVT
DGTGGSSSSDTLLTPSPTGVAETTEGPLPRGVSAPSSSATSTYEPSGSSS
DPDAPTAGNSTDEPGTGDAANIEMDDDGDDSGGDDLSSGAIAAISAVVLA
VVGGGLGVAFKHNNIHCCQTTHFSSSA*