Ec-27_005540.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ec-27_005540.1
Unique Name	Ec-27_005540.1
Type	polypeptide
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	417

Homology

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BLAST of Ec-27_005540.1 vs. uniprot
Match: D8LB21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB21_ECTSI)

HSP 1 Score: 615 bits (1587), Expect = 4.380e-219
Identity = 416/416 (100.00%), Postives = 416/416 (100.00%), Query Frame = 0

Query:    1 MCTVHLLLTSTKGCESTSMVRAAELVQFLHLQRVELGQESSNTMPAELVWAVVLFGLYILWKSTYGGRNPQVHALTLMNERRFKSSTLDTLVLGLAKQLATKARSPHVRQLSEGMVMVVERLVSRQAIIEEEHPSTTRRCQTIFWMLEQVDHVMRAEGDALHPAHRKAMKGVIDNMNDDIRDTMKELEEFRSMDRFKQFLRAPGFEQRMKKSEEVIKRAEDNLYTLSVLWHARTCSRIAGSLEDSQGARAGGRARSVAEARPGTALVETARAKNDAEVIKAYQLTGVPRTAKLCGVVARRGQLGVLQWLREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDIWGRFHYRSPYRSESGYC 416
            MCTVHLLLTSTKGCESTSMVRAAELVQFLHLQRVELGQESSNTMPAELVWAVVLFGLYILWKSTYGGRNPQVHALTLMNERRFKSSTLDTLVLGLAKQLATKARSPHVRQLSEGMVMVVERLVSRQAIIEEEHPSTTRRCQTIFWMLEQVDHVMRAEGDALHPAHRKAMKGVIDNMNDDIRDTMKELEEFRSMDRFKQFLRAPGFEQRMKKSEEVIKRAEDNLYTLSVLWHARTCSRIAGSLEDSQGARAGGRARSVAEARPGTALVETARAKNDAEVIKAYQLTGVPRTAKLCGVVARRGQLGVLQWLREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDIWGRFHYRSPYRSESGYC
Sbjct:    1 MCTVHLLLTSTKGCESTSMVRAAELVQFLHLQRVELGQESSNTMPAELVWAVVLFGLYILWKSTYGGRNPQVHALTLMNERRFKSSTLDTLVLGLAKQLATKARSPHVRQLSEGMVMVVERLVSRQAIIEEEHPSTTRRCQTIFWMLEQVDHVMRAEGDALHPAHRKAMKGVIDNMNDDIRDTMKELEEFRSMDRFKQFLRAPGFEQRMKKSEEVIKRAEDNLYTLSVLWHARTCSRIAGSLEDSQGARAGGRARSVAEARPGTALVETARAKNDAEVIKAYQLTGVPRTAKLCGVVARRGQLGVLQWLREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDIWGRFHYRSPYRSESGYC 416

The following BLAST results are available for this feature:

BLAST of Ec-27_005540.1 vs. uniprot

BLAST of Ec-27_005540.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LB21_ECTSI	4.380e-219	100.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 173..193
None	No IPR available	COILS	Coil	Coil	coord: 202..222
None	No IPR available	PANTHER	PTHR46586:SF3	ANKYRIN REPEAT-CONTAINING PROTEIN	coord: 268..395
None	No IPR available	PANTHER	PTHR46586	FAMILY NOT NAMED	coord: 268..395
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 62..416
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 44..61
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..43
None	No IPR available	SUPERFAMILY	140860	Pseudo ankyrin repeat-like	coord: 289..374
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 264..407 e-value: 6.2E-6 score: 27.0

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_27	contig	chr_27:5023001..5028826 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-27_005540.1	Ec-27_005540.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	mRNA	chr_27 5023001..5028826 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ec-27_005540.1 ID=Ec-27_005540.1|Name=Ec-27_005540.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=417bp
MCTVHLLLTSTKGCESTSMVRAAELVQFLHLQRVELGQESSNTMPAELVW
AVVLFGLYILWKSTYGGRNPQVHALTLMNERRFKSSTLDTLVLGLAKQLA
TKARSPHVRQLSEGMVMVVERLVSRQAIIEEEHPSTTRRCQTIFWMLEQV
DHVMRAEGDALHPAHRKAMKGVIDNMNDDIRDTMKELEEFRSMDRFKQFL
RAPGFEQRMKKSEEVIKRAEDNLYTLSVLWHARTCSRIAGSLEDSQGARA
GGRARSVAEARPGTALVETARAKNDAEVIKAYQLTGVPRTAKLCGVVARR
GQLGVLQWLRETGCPWNEGTCCMAAEGGHLDVLKWARENGCPWDEWTCAQ
AAAGGHLDVLKWARKNGCPWDDDTCFAAKCEGHLDVLKWAEENGCPEDIW
GRFHYRSPYRSESGYC*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036770	Ankyrin_rpt-contain_sf