Ec-27_005360.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-27_005360.1
Unique NameEc-27_005360.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length277
Homology
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BLAST of Ec-27_005360.1 vs. uniprot
Match: D8LB37_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB37_ECTSI)

HSP 1 Score: 543 bits (1399), Expect = 4.220e-195
Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 0 
Query:    1 MYSLDGVALSGSLLASLLNEAASPYAGSEPRKGTRYTDGLLFGSVNRRQGTETEDDHERRATTHREAALSGYVRSPARCGFYDEFGAIDEGRLALLIPQGQRLAGYFVVHKGGSTRPSLREIEVFRGMVASSSASGQLPVLLVACLRLRDGAPTQSFQYQCLTAQGGVGGPQGAGRLEVLPCRINNLTMDSSAEYGHVRPSPVVPLGVEGAQQSALEEAFGPVPPPYVSEAEALLDTGIKTMEDLVSELKLVENTVVRLQLENRCMERVLMNRGGT 276
            MYSLDGVALSGSLLASLLNEAASPYAGSEPRKGTRYTDGLLFGSVNRRQGTETEDDHERRATTHREAALSGYVRSPARCGFYDEFGAIDEGRLALLIPQGQRLAGYFVVHKGGSTRPSLREIEVFRGMVASSSASGQLPVLLVACLRLRDGAPTQSFQYQCLTAQGGVGGPQGAGRLEVLPCRINNLTMDSSAEYGHVRPSPVVPLGVEGAQQSALEEAFGPVPPPYVSEAEALLDTGIKTMEDLVSELKLVENTVVRLQLENRCMERVLMNRGGT
Sbjct:    1 MYSLDGVALSGSLLASLLNEAASPYAGSEPRKGTRYTDGLLFGSVNRRQGTETEDDHERRATTHREAALSGYVRSPARCGFYDEFGAIDEGRLALLIPQGQRLAGYFVVHKGGSTRPSLREIEVFRGMVASSSASGQLPVLLVACLRLRDGAPTQSFQYQCLTAQGGVGGPQGAGRLEVLPCRINNLTMDSSAEYGHVRPSPVVPLGVEGAQQSALEEAFGPVPPPYVSEAEALLDTGIKTMEDLVSELKLVENTVVRLQLENRCMERVLMNRGGT 276
The following BLAST results are available for this feature:
BLAST of Ec-27_005360.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LB37_ECTSI4.220e-195100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 242..262
NoneNo IPR availablePANTHERPTHR31728:SF5coord: 5..200
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..276
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
IPR023238FAM175 familyPRINTSPR02051PROTEINF175coord: 80..99
score: 28.1
coord: 105..121
score: 24.93
coord: 181..195
score: 32.7
coord: 9..27
score: 27.82
IPR023238FAM175 familyPANTHERPTHR31728FAMILY NOT NAMEDcoord: 5..200

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:4846880..4851234 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_005360.1Ec-27_005360.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_27 4846880..4851234 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-27_005360.1 ID=Ec-27_005360.1|Name=Ec-27_005360.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=277bp
MYSLDGVALSGSLLASLLNEAASPYAGSEPRKGTRYTDGLLFGSVNRRQG
TETEDDHERRATTHREAALSGYVRSPARCGFYDEFGAIDEGRLALLIPQG
QRLAGYFVVHKGGSTRPSLREIEVFRGMVASSSASGQLPVLLVACLRLRD
GAPTQSFQYQCLTAQGGVGGPQGAGRLEVLPCRINNLTMDSSAEYGHVRP
SPVVPLGVEGAQQSALEEAFGPVPPPYVSEAEALLDTGIKTMEDLVSELK
LVENTVVRLQLENRCMERVLMNRGGT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023238FAM175