Ec-27_005240.2 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-27_005240.2
Unique NameEc-27_005240.2
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length409
Homology
BLAST of Ec-27_005240.2 vs. uniprot
Match: D8LB48_ECTSI (Pseudouridine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB48_ECTSI)

HSP 1 Score: 656 bits (1692), Expect = 4.280e-232
Identity = 408/408 (100.00%), Postives = 408/408 (100.00%), Query Frame = 0
Query:    1 MHRQRPDLTLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGSGRTRKTYLARVSGDFGQRLPLDRRKQGSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATDELWWRYESLGEGVVKGRLRSSGAISGEEGGLAESSASSGGVGSGGAGGEKEGVTVRVNCPIRVLDPKHGVYECHPSGKEAQTVVRKVGYDTASDTSVVECTPVHGRTHQIRLHLQWAGHPIANDPCYGGELHFGNPEAKRRAEENPDLEGGWKGVPGSNSTAAAGRGSMGENEARQPRTSEAADGAGMEVDGDSGDWAVEGDGGRGGGGAPDAVVGAPDAGIAGASVEEAAVGGVVSSGDGVEGQREGEDDEKFMGPDWAFETKMPSWATI 408
            MHRQRPDLTLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGSGRTRKTYLARVSGDFGQRLPLDRRKQGSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATDELWWRYESLGEGVVKGRLRSSGAISGEEGGLAESSASSGGVGSGGAGGEKEGVTVRVNCPIRVLDPKHGVYECHPSGKEAQTVVRKVGYDTASDTSVVECTPVHGRTHQIRLHLQWAGHPIANDPCYGGELHFGNPEAKRRAEENPDLEGGWKGVPGSNSTAAAGRGSMGENEARQPRTSEAADGAGMEVDGDSGDWAVEGDGGRGGGGAPDAVVGAPDAGIAGASVEEAAVGGVVSSGDGVEGQREGEDDEKFMGPDWAFETKMPSWATI
Sbjct:  208 MHRQRPDLTLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGSGRTRKTYLARVSGDFGQRLPLDRRKQGSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATDELWWRYESLGEGVVKGRLRSSGAISGEEGGLAESSASSGGVGSGGAGGEKEGVTVRVNCPIRVLDPKHGVYECHPSGKEAQTVVRKVGYDTASDTSVVECTPVHGRTHQIRLHLQWAGHPIANDPCYGGELHFGNPEAKRRAEENPDLEGGWKGVPGSNSTAAAGRGSMGENEARQPRTSEAADGAGMEVDGDSGDWAVEGDGGRGGGGAPDAVVGAPDAGIAGASVEEAAVGGVVSSGDGVEGQREGEDDEKFMGPDWAFETKMPSWATI 615          
BLAST of Ec-27_005240.2 vs. uniprot
Match: A0A6H5KK40_9PHAE (PseudoU_synth_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK40_9PHAE)

HSP 1 Score: 267 bits (683), Expect = 3.680e-82
Identity = 212/220 (96.36%), Postives = 213/220 (96.82%), Query Frame = 0
Query:    1 MHRQRPDLTLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGSGRTRKTYLARVSGDFGQRLPLDRRKQGSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATDELWWRYESLGEGVVKGRLRSSGAISGEEGGLAESSASSGGVGSGGAGGEKEGVTVRVNCPIRVLDPKHGVYECHPSGKEAQTV 220
            MHRQRPDLTLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIG GRTRKTYLARVSGDFGQRLPLDRRKQGSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A DELWWRYESLGEGVVKGRLRSSGA+SGEEGGLAESS SSG  G GGAGGEKEGVTVRVNCPIRVLDPKHGVYECHPSGKEAQTV
Sbjct:  188 MHRQRPDLTLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGLGRTRKTYLARVSGDFGQRLPLDRRKQGSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-DELWWRYESLGEGVVKGRLRSSGAVSGEEGGLAESSVSSGRAGGGGAGGEKEGVTVRVNCPIRVLDPKHGVYECHPSGKEAQTV 406          
BLAST of Ec-27_005240.2 vs. uniprot
Match: A0A6H5KLC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLC8_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 2.590e-29
Identity = 73/115 (63.48%), Postives = 75/115 (65.22%), Query Frame = 0
Query:  325 MEVDGDSGDWAVEGDGGRGGGGAPDAVVGAPDAGIAGASVEEAAVGGVVSSGDGVEGQREGEDDEKFM-------------------------------GPDWAFETKMPSWATI 408
            MEVDGDSGD AVE DGG G GGAPDAV GAPDA IAGASVEEA VGGVV+S DGVEGQREGEDDEKFM                               GPDWAFETK+PSWAT 
Sbjct:    1 MEVDGDSGDCAVESDGGSGAGGAPDAVAGAPDADIAGASVEEAVVGGVVASRDGVEGQREGEDDEKFMVRTCSMCQSGERFKETQLHCVGIWLHALRYQGPDWAFETKVPSWATF 115          
BLAST of Ec-27_005240.2 vs. uniprot
Match: M4C6Q4_HYAAE (PseudoU_synth_2 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C6Q4_HYAAE)

HSP 1 Score: 114 bits (286), Expect = 1.110e-25
Identity = 54/91 (59.34%), Postives = 68/91 (74.73%), Query Frame = 0
Query:  191 TVRVNCPIRVLDPKHGVYECHPSGKEAQTVVRKVGYDTASDTSVVECTPVHGRTHQIRLHLQWAGHPIANDPCYGGELHFGNPEAKRRAEE 281
            T+ ++CP+R L  + GV+ECH +GK ++T+VR V  D +  TS+V+C PV GRTHQIRLHLQ  G PIANDPCYGGELHFG  E+  R EE
Sbjct:  102 TIFISCPLRCLSARDGVWECHENGKASETLVRLVRADKS--TSLVKCQPVTGRTHQIRLHLQLVGFPIANDPCYGGELHFG--ESAERIEE 188          
BLAST of Ec-27_005240.2 vs. uniprot
Match: A0A8K1CHM9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHM9_PYTOL)

HSP 1 Score: 115 bits (289), Expect = 1.040e-24
Identity = 87/280 (31.07%), Postives = 112/280 (40.00%), Query Frame = 0
Query:    1 MHRQRPDLT-LRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGSGRTRKTYLARVSGDFGQRLPLDRRKQGSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATDELWWRYESLGEGVVKGRLRSSGAISGEEGGLAESSASSGGVGSGGAGGEKEGVTVRVNCPIRVLDPKHGVYECHPSGKEAQTVVRKVGYDTASDTSVVECTPVHGRTHQIRLHLQWAGHPIANDPCYGGELHFGNPEAKRRA 279
            +HR RPDL  L + HRLDRLTSG+ I AK+  +A  + + I      KTYLARV G     LP +                                                                      A D+ +   + L     K    S      ++                         T+ ++CP+R L  +  V+ECH  GKE+QT VR +  D    T++VEC P+ GRTHQIRLHLQ  G PIANDPCYGGELHFG    +R A
Sbjct:  211 VHRMRPDLPQLNIVHRLDRLTSGIVILAKSGVKAKALSQCISDREASKTYLARVRGH----LPTE----------------------------------------------------------------------AFDDAF--KQQLVATAAKNCAASEITFPDDQ-------------------------TIHISCPLRCLSQRDAVWECHEEGKESQTRVRVLRID--QQTTLVECKPITGRTHQIRLHLQLLGFPIANDPCYGGELHFGESSERREA 387          
BLAST of Ec-27_005240.2 vs. uniprot
Match: A0A2D4BPM1_PYTIN (RNA pseudouridylate synthase, putative n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BPM1_PYTIN)

HSP 1 Score: 115 bits (288), Expect = 1.760e-24
Identity = 91/278 (32.73%), Postives = 112/278 (40.29%), Query Frame = 0
Query:    3 RQRPDL-TLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGSGRTRKTYLARVSGDFGQRLPLDRRKQGSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATDELWWRYESLGEGVVKGRLRSSGAISGEEGGLAESSASSGGVGSGGAGGEKEGVTVRVNCPIRVLDPKHGVYECHPSGKEAQTVVRKVGYDTASDTSVVECTPVHGRTHQIRLHLQWAGHPIANDPCYGGELHFGNPEAKRRA 279
            R RPDL TL + HRLDRLTSG+ I AK+  +A  + + I      KTYLARV G    +L  D  KQ                                                                  A++  + + +  G  V+                                          V+CP+R L P+  V+ECH  GKE+QT VR    D A  T++VEC P+ GRTHQIRLHLQ  G PIANDPCYGGELHFG   A RRA
Sbjct:  236 RMRPDLPTLNIVHRLDRLTSGIVILAKSGAKAKALAQCISDREASKTYLARVRGHLPLQLD-DAFKQ-------------------------------------------------------RLVETARANCAASEVSFLQQDDDGADVI-----------------------------------------HVSCPLRCLSPRDAVWECHADGKESQTRVRVRRLDGA--TTLVECKPITGRTHQIRLHLQLLGFPIANDPCYGGELHFGE-SADRRA 413          
BLAST of Ec-27_005240.2 vs. uniprot
Match: M4C6A7_HYAAE (PseudoU_synth_2 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C6A7_HYAAE)

HSP 1 Score: 114 bits (286), Expect = 1.810e-24
Identity = 54/91 (59.34%), Postives = 68/91 (74.73%), Query Frame = 0
Query:  191 TVRVNCPIRVLDPKHGVYECHPSGKEAQTVVRKVGYDTASDTSVVECTPVHGRTHQIRLHLQWAGHPIANDPCYGGELHFGNPEAKRRAEE 281
            T+ ++CP+R L  + GV+ECH +GK ++T+VR V  D +  TS+V+C PV GRTHQIRLHLQ  G PIANDPCYGGELHFG  E+  R EE
Sbjct:  274 TIFISCPLRCLSARDGVWECHENGKASETLVRLVRADKS--TSLVKCQPVTGRTHQIRLHLQLVGFPIANDPCYGGELHFG--ESAERIEE 360          
BLAST of Ec-27_005240.2 vs. uniprot
Match: A0A662WKV3_9STRA (PseudoU_synth_2 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WKV3_9STRA)

HSP 1 Score: 114 bits (286), Expect = 2.600e-24
Identity = 53/91 (58.24%), Postives = 66/91 (72.53%), Query Frame = 0
Query:  191 TVRVNCPIRVLDPKHGVYECHPSGKEAQTVVRKVGYDTASDTSVVECTPVHGRTHQIRLHLQWAGHPIANDPCYGGELHFGNPEAKRRAEE 281
            T+ +NCP+R L  + GV+ECH  GK ++T+VR V  D    TS+++C P+ GRTHQIRLHLQ  G PIANDPCYGGELHFG  E+  R EE
Sbjct:  306 TILINCPLRCLSARDGVWECHEEGKPSETLVRLVRTDNC--TSLLQCKPITGRTHQIRLHLQLLGFPIANDPCYGGELHFG--ESVARTEE 392          
BLAST of Ec-27_005240.2 vs. uniprot
Match: G4YVW7_PHYSP (PseudoU_synth_2 domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YVW7_PHYSP)

HSP 1 Score: 113 bits (282), Expect = 5.470e-24
Identity = 55/100 (55.00%), Postives = 71/100 (71.00%), Query Frame = 0
Query:  187 KEGVTVRVNCPIRVLDPKHGVYECHPSGKEAQTVVRKVGYDTASDTSVVECTPVHGRTHQIRLHLQWAGHPIANDPCYGGELHFGNPEAKRRAEENPDLE 286
            KEG  V ++CP+R L  + GV+ECH  GK ++T+V+ +  D    TS++EC P+ GRTHQIRLHLQ  G PIANDPCYGGELHFG  E+  RA+E  D +
Sbjct:  253 KEG-GVLISCPLRCLSARDGVWECHEEGKSSETLVKLIRTDKC--TSLMECKPITGRTHQIRLHLQLIGFPIANDPCYGGELHFG--ESTERAKEIADAK 347          
BLAST of Ec-27_005240.2 vs. uniprot
Match: D0N321_PHYIT (RNA pseudouridylate synthase, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N321_PHYIT)

HSP 1 Score: 114 bits (285), Expect = 6.020e-24
Identity = 55/90 (61.11%), Postives = 66/90 (73.33%), Query Frame = 0
Query:  192 VRVNCPIRVLDPKHGVYECHPSGKEAQTVVRKVGYDTASDTSVVECTPVHGRTHQIRLHLQWAGHPIANDPCYGGELHFGNPEAKRRAEE 281
            V ++CP+R L  + GV+ECH  GK ++T+VR V  D    TS+V+C PV GRTHQIRLHLQ  G PIANDPCYGGELHFG  E+  RAEE
Sbjct:  385 VLISCPLRCLSARDGVWECHEEGKPSETLVRLVRTDKC--TSLVKCKPVTGRTHQIRLHLQLIGFPIANDPCYGGELHFG--ESAERAEE 470          
The following BLAST results are available for this feature:
BLAST of Ec-27_005240.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB48_ECTSI4.280e-232100.00Pseudouridine synthase n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5KK40_9PHAE3.680e-8296.36PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
A0A6H5KLC8_9PHAE2.590e-2963.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
M4C6Q4_HYAAE1.110e-2559.34PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
A0A8K1CHM9_PYTOL1.040e-2431.07Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BPM1_PYTIN1.760e-2432.73RNA pseudouridylate synthase, putative n=2 Tax=Pyt... [more]
M4C6A7_HYAAE1.810e-2459.34PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
A0A662WKV3_9STRA2.600e-2458.24PseudoU_synth_2 domain-containing protein n=2 Tax=... [more]
G4YVW7_PHYSP5.470e-2455.00PseudoU_synth_2 domain-containing protein n=4 Tax=... [more]
D0N321_PHYIT6.020e-2461.11RNA pseudouridylate synthase, putative n=2 Tax=Phy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.2350.10coord: 1..87
e-value: 1.7E-12
score: 49.3
coord: 150..282
e-value: 6.4E-19
score: 70.3
NoneNo IPR availablePANTHERPTHR21600:SF40RNA PSEUDOURIDYLATE SYNTHASE DOMAIN-CONTAINING PROTEIN 2coord: 191..406
NoneNo IPR availablePANTHERPTHR21600:SF40RNA PSEUDOURIDYLATE SYNTHASE DOMAIN-CONTAINING PROTEIN 2coord: 10..58
NoneNo IPR availablePANTHERPTHR21600RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 191..406
NoneNo IPR availablePANTHERPTHR21600RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 10..58
IPR006145Pseudouridine synthase, RsuA/RluAPFAMPF00849PseudoU_synth_2coord: 9..253
e-value: 3.7E-19
score: 69.4
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 8..268

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:4747085..4751213 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_005240.2Ec-27_005240.2Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_27 4747065..4754640 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-27_005240.2 ID=Ec-27_005240.2|Name=Ec-27_005240.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=409bp
MHRQRPDLTLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGSGRTRKTYL
ARVSGDFGQRLPLDRRKQGSPSSSAAAAAAAASARAGGGGDTSLSPPEGT
AGTPPKEGGNPSAGGGTGGERETPPVVSSGGGGPATDELWWRYESLGEGV
VKGRLRSSGAISGEEGGLAESSASSGGVGSGGAGGEKEGVTVRVNCPIRV
LDPKHGVYECHPSGKEAQTVVRKVGYDTASDTSVVECTPVHGRTHQIRLH
LQWAGHPIANDPCYGGELHFGNPEAKRRAEENPDLEGGWKGVPGSNSTAA
AGRGSMGENEARQPRTSEAADGAGMEVDGDSGDWAVEGDGGRGGGGAPDA
VVGAPDAGIAGASVEEAAVGGVVSSGDGVEGQREGEDDEKFMGPDWAFET
KMPSWATI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006145PsdUridine_synth_RsuA/RluA
IPR020103PsdUridine_synth_cat_dom_sf