Ec-27_005220.2 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-27_005220.2
Unique NameEc-27_005220.2
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length240
Homology
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BLAST of Ec-27_005220.2 vs. uniprot
Match: D8LB50_ECTSI (Palmitoyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB50_ECTSI)

HSP 1 Score: 449 bits (1154), Expect = 1.830e-155
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0 
Query:   13 GAGNHKQMLLFLVYSAACAVHAAFLFCRLCNAFLMAVLLVGIFSWLVCLISSQVHGIRVHAGTVDRMQAAAPGYRAAGQAGALGAAPPDSRRQDGWPGLLPTRRECPPGHLPLPGDGRVTPVLDEDATSSTGQELTQGARRPASASSGGFEVAVSLPRATPGAVAGDAASGGLGLRFRVIRGLWETVHQEILGEGAWVLWFVPTPARLSPELEQRVYAPHGKAGRAQ 239
            GAGNHKQMLLFLVYSAACAVHAAFLFCRLCNAFLMAVLLVGIFSWLVCLISSQVHGIRVHAGTVDRMQAAAPGYRAAGQAGALGAAPPDSRRQDGWPGLLPTRRECPPGHLPLPGDGRVTPVLDEDATSSTGQELTQGARRPASASSGGFEVAVSLPRATPGAVAGDAASGGLGLRFRVIRGLWETVHQEILGEGAWVLWFVPTPARLSPELEQRVYAPHGKAGRAQ
Sbjct:  244 GAGNHKQMLLFLVYSAACAVHAAFLFCRLCNAFLMAVLLVGIFSWLVCLISSQVHGIRVHAGTVDRMQAAAPGYRAAGQAGALGAAPPDSRRQDGWPGLLPTRRECPPGHLPLPGDGRVTPVLDEDATSSTGQELTQGARRPASASSGGFEVAVSLPRATPGAVAGDAASGGLGLRFRVIRGLWETVHQEILGEGAWVLWFVPTPARLSPELEQRVYAPHGKAGRAQ 470
The following BLAST results are available for this feature:
BLAST of Ec-27_005220.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LB50_ECTSI1.830e-155100.00Palmitoyltransferase n=1 Tax=Ectocarpus siliculosu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001594Palmitoyltransferase, DHHC domainPFAMPF01529DHHCcoord: 1..40
e-value: 9.5E-8
score: 32.2
NoneNo IPR availablePANTHERPTHR22883:SF23PALMITOYLTRANSFERASEcoord: 1..61
NoneNo IPR availablePANTHERPTHR22883ZINC FINGER DHHC DOMAIN CONTAINING PROTEINcoord: 1..61
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..62
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 63..239
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..38
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 39..43
NoneNo IPR availablePROSITEPS50216DHHCcoord: 1..25
score: 13.157
NoneNo IPR availableTMHMMTMhelixcoord: 20..39
NoneNo IPR availableTMHMMTMhelixcoord: 44..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:4718196..4718915 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_005220.2Ec-27_005220.2Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_27 4717107..4721450 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-27_005220.2 ID=Ec-27_005220.2|Name=Ec-27_005220.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=240bp
MDHHCAFVANCVGAGNHKQMLLFLVYSAACAVHAAFLFCRLCNAFLMAVL
LVGIFSWLVCLISSQVHGIRVHAGTVDRMQAAAPGYRAAGQAGALGAAPP
DSRRQDGWPGLLPTRRECPPGHLPLPGDGRVTPVLDEDATSSTGQELTQG
ARRPASASSGGFEVAVSLPRATPGAVAGDAASGGLGLRFRVIRGLWETVH
QEILGEGAWVLWFVPTPARLSPELEQRVYAPHGKAGRAQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001594Palmitoyltrfase_DHHC