Ec-27_005110.2 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-27_005110.2
Unique NameEc-27_005110.2
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length130
Homology
BLAST of Ec-27_005110.2 vs. uniprot
Match: D8LB60_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB60_ECTSI)

HSP 1 Score: 233 bits (595), Expect = 1.900e-77
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
Query:    1 MAGVMEAMQGPIGVAFLTMVTVLVVVGGVAVCRRLLCKTAVNYTAVNHSLDEEEIAFKNSLEAQNEGGDDIDELFNFSGQDELEFDTNDLDNLEMLQMYRSNLGFPANPRGGVETGLGKDGAA 123
            MAGVMEAMQGPIGVAFLTMVTVLVVVGGVAVCRRLLCKTAVNYTAVNHSLDEEEIAFKNSLEAQNEGGDDIDELFNFSGQDELEFDTNDLDNLEMLQMYRSNLGFPANPRGGVETGLGKDGAA
Sbjct:    1 MAGVMEAMQGPIGVAFLTMVTVLVVVGGVAVCRRLLCKTAVNYTAVNHSLDEEEIAFKNSLEAQNEGGDDIDELFNFSGQDELEFDTNDLDNLEMLQMYRSNLGFPANPRGGVETGLGKDGAA 123          
BLAST of Ec-27_005110.2 vs. uniprot
Match: A0A6H5K9N2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9N2_9PHAE)

HSP 1 Score: 218 bits (555), Expect = 9.540e-71
Identity = 117/123 (95.12%), Postives = 119/123 (96.75%), Query Frame = 0
Query:    1 MAGVMEAMQGPIGVAFLTMVTVLVVVGGVAVCRRLLCKTAVNYTAVNHSLDEEEIAFKNSLEAQNEGGDDIDELFNFSGQDELEFDTNDLDNLEMLQMYRSNLGFPANPRGGVETGLGKDGAA 123
            MAGV+EAMQGPIGVAFLTMVTVLVVVGGVAVCRRL CKTAVNYTAVNHSLDEEE AFKNSLEAQNEGGDDIDELFNFSGQDELEFDTNDLDNLEM+QMYRSNLG PANPRG VETGLGKDGAA
Sbjct:    1 MAGVIEAMQGPIGVAFLTMVTVLVVVGGVAVCRRLCCKTAVNYTAVNHSLDEEETAFKNSLEAQNEGGDDIDELFNFSGQDELEFDTNDLDNLEMMQMYRSNLGVPANPRG-VETGLGKDGAA 122          
BLAST of Ec-27_005110.2 vs. uniprot
Match: A0A7S2V8A7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8A7_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 3.300e-14
Identity = 39/81 (48.15%), Postives = 55/81 (67.90%), Query Frame = 0
Query:   23 LVVVGGVAVCRRLLCKTAVNYTAVNHSLDEEEIAFKNSLEAQNEGGDDIDELFNFSGQDELEFDTNDLDNLEMLQMYRSNL 103
            L++  G+  C +   ++ V Y AV H LD++E+ FK +LE +  G D ID+LF+F GQD++EFD  DLDNLE L+ YR NL
Sbjct:   22 LIIFFGIRRCNKCKRRSQVPYNAVAHELDDDELLFKKTLEMK--GDDVIDKLFDFDGQDDMEFDAKDLDNLESLESYRKNL 100          
BLAST of Ec-27_005110.2 vs. uniprot
Match: A0A7S2RGQ9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RGQ9_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 9.010e-12
Identity = 47/101 (46.53%), Postives = 61/101 (60.40%), Query Frame = 0
Query:   36 LCKTAVNYTAVNHSLDEEEIAFKNSLEAQNEGGDDIDELFNFS--GQDELEFDTNDLDNLEMLQMYRSNL----------GFPANPRG-GVETGLGKDGAA 123
            L K    YT V+H LD+EE AFK +LE Q    D+ID+LFNF+  G  E+EFD ++L+ +EML+ YRSNL          G     RG G+  G+G DGAA
Sbjct:   80 LRKKDYRYTMVHHGLDDEEQAFKRNLETQT---DEIDDLFNFTADGDQEIEFDASELEQIEMLENYRSNLVAASSGAAVPGKGTETRGAGLSNGMGGDGAA 177          
BLAST of Ec-27_005110.2 vs. uniprot
Match: A0A836C8T1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8T1_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 2.100e-8
Identity = 34/71 (47.89%), Postives = 46/71 (64.79%), Query Frame = 0
Query:   33 RRLLCKTAVNYTAVNHSLDEEEIAFKNSLEAQNEGGDDIDELFNFSGQDELEFDTNDLDNLEMLQMYRSNL 103
            RRLL     +Y AVNH LD+EE+ FK  ++  +   ++IDELFNFS  D+L FD  +L  +EML  YR +L
Sbjct:   35 RRLL---NASYQAVNHGLDDEELQFKKRMDEMH--AEEIDELFNFSPDDDLAFDAEELGQIEMLDAYRKDL 100          
The following BLAST results are available for this feature:
BLAST of Ec-27_005110.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LB60_ECTSI1.900e-77100.00Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K9N2_9PHAE9.540e-7195.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2V8A7_9STRA3.300e-1448.15Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2RGQ9_9STRA9.010e-1246.53Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A836C8T1_9STRA2.100e-847.89Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 33..130
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 10..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:4628214..4631159 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_005110.2Ec-27_005110.2Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_27 4627703..4631161 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-27_005110.2 ID=Ec-27_005110.2|Name=Ec-27_005110.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=130bp
MAGVMEAMQGPIGVAFLTMVTVLVVVGGVAVCRRLLCKTAVNYTAVNHSL
DEEEIAFKNSLEAQNEGGDDIDELFNFSGQDELEFDTNDLDNLEMLQMYR
SNLGFPANPRGGVETGLGKDGAAXXXXXXX
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