Ec-27_005040.4 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ec-27_005040.4
Unique Name	Ec-27_005040.4
Type	polypeptide
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	732

Homology

[Close]

BLAST of Ec-27_005040.4 vs. uniprot
Match: D8LB64_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB64_ECTSI)

HSP 1 Score: 182 bits (463), Expect = 9.840e-46
Identity = 390/390 (100.00%), Postives = 390/390 (100.00%), Query Frame = 0

Query:    1 MRLLRWRCALLIATLAASNVVSPANSQDSSLTSAGDDVEDTSSSSDPAXXXXXAVAEIDPSDDXXXXXXXXXXXXXXXXXXXXXXSPVEXXXXXPAPVEDESVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEETXXXXXXXXXXXXXXXXXXETPSPVEXXXXXXXXXXXXXXXXXXXPEXXEDETPSXXXXXXXXXXXXXXXXXXTPAEEEAEXXXXXXXXXXXXXXXXPAEETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEEAXXXXXXXXXXXXXXXXXPTEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPVADELTDAPVIDATENPASAETPAPVAIIXXXXXXXXXXXXXXXXXXXXXASERT 390
            MRLLRWRCALLIATLAASNVVSPANSQDSSLTSAGDDVEDTSSSSDPAXXXXXAVAEIDPSDDXXXXXXXXXXXXXXXXXXXXXXSPVEXXXXXPAPVEDESVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEETXXXXXXXXXXXXXXXXXXETPSPVEXXXXXXXXXXXXXXXXXXXPEXXEDETPSXXXXXXXXXXXXXXXXXXTPAEEEAEXXXXXXXXXXXXXXXXPAEETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEEAXXXXXXXXXXXXXXXXXPTEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPVADELTDAPVIDATENPASAETPAPVAIIXXXXXXXXXXXXXXXXXXXXXASERT
Sbjct:    1 MRLLRWRCALLIATLAASNVVSPANSQDSSLTSAGDDVEDTSSSSDPAXXXXXAVAEIDPSDDXXXXXXXXXXXXXXXXXXXXXXSPVEXXXXXPAPVEDESVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEETXXXXXXXXXXXXXXXXXXETPSPVEXXXXXXXXXXXXXXXXXXXPEXXEDETPSXXXXXXXXXXXXXXXXXXTPAEEEAEXXXXXXXXXXXXXXXXPAEETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEEAXXXXXXXXXXXXXXXXXPTEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPVADELTDAPVIDATENPASAETPAPVAIIXXXXXXXXXXXXXXXXXXXXXASERT 390

[Close]

BLAST of Ec-27_005040.4 vs. uniprot
Match: A0A6H5KLT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLT6_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 2.870e-16
Identity = 172/221 (77.83%), Postives = 177/221 (80.09%), Query Frame = 0

Query:    1 MRLLRWRCALLIATLAASNVVSPANSQDSSLTSAGDDVEDTSSSSDPAXXXXXAVAEIDPSDDXXXXXXXXXXXXXXXXXXXXXXSPVEXXXXXPAPVEDESVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-DIEETXXXXXXXXXXXXXXXXXXETPSPVEXXXXXXXXXXXXXXXXXXXPEXXEDETPSXXXXXXXXXXXXXXXXXXTPAEEEAE 220
            MRLLRWRCALLIATLAASN+VSPANSQDSS TSAGDDVEDT SS DPA     AVAEID SD XXXXXXXXXXXXXXXXXX XXX  VE      APVE+ESVD             XXXXXXXXXXXXXXXX   DIE  XXXXXXXXXXXXXXXXXXETP PVE XXXXXXXXXXXXXXXXXXP+  E+ETP+   XXXXXXXXXXXXXXXTPAEEEAE
Sbjct:    1 MRLLRWRCALLIATLAASNLVSPANSQDSSPTSAGDDVEDTGSSLDPAPEPTPAVAEIDASDXXXXXXXXXXXXXXXXXXXPXXXX-VEEEQDTLAPVENESVDTPAPSAAEEDAPEXXXXXXXXXXXXXXXXPVEDIEXXXXXXXXXXXXXXXXXXXXETPPPVEEXXXXXXXXXXXXXXXXXXPDEGEEETPAPAGXXXXXXXXXXXXXXXTPAEEEAE 220

The following BLAST results are available for this feature:

BLAST of Ec-27_005040.4 vs. uniprot

BLAST of Ec-27_005040.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LB64_ECTSI	9.840e-46	100.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KLT6_9PHAE	2.870e-16	77.83	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..7
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 8..18
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 19..26
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 27..731
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..26
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..26 score: 0.636

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_27	contig	chr_27:4565472..4572283 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-27_005040.4	Ec-27_005040.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	mRNA	chr_27 4565262..4573314 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ec-27_005040.4 ID=Ec-27_005040.4|Name=Ec-27_005040.4|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=732bp
MRLLRWRCALLIATLAASNVVSPANSQDSSLTSAGDDVEDTSSSSDPAPK
PTPAVAEIDPSDDPPSDDTPSPVEEEEEEEDEPTPSPVEEEEDTPAPVED
ESVDTPAPSTEEEDAPETPAPVEEEEEEKTPSPVEDIEETPQPTPGEEEA
EETPTPVEETPSPVEEVEATPAPVEEVEETLQPTPEEEEDETPSPVEETP
SPVEELEETPQPTPAEEEAEETPSPVEEVEETPQPTPAEETPSPVEEVEE
TPQPTPAEETPSPVEEVEETPQPTPGEEEAEETPSPVEDIDKQETPAPTE
AETPEPTEPATPEPTVRWTYAPADPWTESPETPIPVADELTDAPVIDATE
NPASAETPAPVAIITDAPIIDATENPASAETPAPVASERTDAPVIDATEN
PASAEAPAPVASERTDAPVIDATENPASVETPAPVASIIDAPIIDATETP
ASAETPAPVASERTDAPVIDATENPASVETPAPVASIIDAPIIDATETPA
SAKTPAPVASERTDAPVTGETGRTATGETPTPVTDTPVTADPVAQPETEP
PTGTATLLPTVDPTLAPTVKQTWAPADPWTESPGATPAPQRVWTASPDAT
PAPVAPWTASPGATPAPQREWTASPGATAAPQREWTASPGATAAPVAPWT
ASPGATPAPQREWTASPGATPAPQREWTASPGATFAPAAPWTASPGMIRA
QLWRFRCERRPANERFFREPPRDSRTLERRE*