Ec-27_004820.2 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-27_004820.2
Unique NameEc-27_004820.2
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length186
Homology
BLAST of Ec-27_004820.2 vs. uniprot
Match: D8LB85_ECTSI (Protein RER1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB85_ECTSI)

HSP 1 Score: 371 bits (953), Expect = 4.300e-130
Identity = 185/188 (98.40%), Postives = 185/188 (98.40%), Query Frame = 0
Query:    1 MEDPGSSKLDVYSAKIRRTYQYWLDRSVIYTMWRWGLFFVSVCLFLLRIYLVKGWFIVTYGLGIFLLNNLIGFLSPQIDPESEGPGLPTSGSDEF---SRRLPEFQFWLSSQKGLLMAFGMTFFSLFDIPVFWPILLIYFIVLMFLTMKRQVKHMIKHKYVPWNWGKATYKGGASNGTGGGKPFKNNK 185
            MEDPGSSKLDVYSAKIRRTYQYWLDRSVIYTMWRWGLFFVSVCLFLLRIYLVKGWFIVTYGLGIFLLNNLIGFLSPQIDPESEGPGLPTSGSDEF   SRRLPEFQFWLSSQKGLLMAFGMTFFSLFDIPVFWPILLIYFIVLMFLTMKRQVKHMIKHKYVPWNWGKATYKGGASNGTGGGKPFKNNK
Sbjct:    1 MEDPGSSKLDVYSAKIRRTYQYWLDRSVIYTMWRWGLFFVSVCLFLLRIYLVKGWFIVTYGLGIFLLNNLIGFLSPQIDPESEGPGLPTSGSDEFRPFSRRLPEFQFWLSSQKGLLMAFGMTFFSLFDIPVFWPILLIYFIVLMFLTMKRQVKHMIKHKYVPWNWGKATYKGGASNGTGGGKPFKNNK 188          
BLAST of Ec-27_004820.2 vs. uniprot
Match: A0A7S3K339_9STRA (Protein RER1 n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K339_9STRA)

HSP 1 Score: 216 bits (551), Expect = 1.070e-68
Identity = 109/175 (62.29%), Postives = 136/175 (77.71%), Query Frame = 0
Query:    7 SKLDVYSAKIRRTYQYWLDRSVIYTMWRWGLFFVSVCLFLLRIYLVKGWFIVTYGLGIFLLNNLIGFLSPQIDPESEGPGLPTSGSDE----FSRRLPEFQFWLSSQKGLLMAFGMTFFSLFDIPVFWPILLIYFIVLMFLTMKRQVKHMIKHKYVPWNWGKATYKGGASNGTGG 177
            S ++ +  KI+R +Q  LD S +Y + RW +FFV + ++++R   + GW+IVTYGLGIFLLNN IGFLSPQ+DPE+EGP LPTS  D     FSRR+PEF+FW SS KG+L+AF MTFFS FDIPVFWPILL+Y+I L+FLTMKRQ+KHMIKHKYVPW++GKA Y   A  G GG
Sbjct:   17 SGIEKFLVKIQRQFQRILDISTVYVITRWLIFFVCILIYVIRTASINGWYIVTYGLGIFLLNNFIGFLSPQMDPENEGPVLPTSSDDAEFRPFSRRVPEFKFWYSSTKGVLIAFVMTFFSFFDIPVFWPILLLYWIALVFLTMKRQIKHMIKHKYVPWSYGKAKY--AAPGGAGG 189          
BLAST of Ec-27_004820.2 vs. uniprot
Match: A0A7S2W0T1_9STRA (Protein RER1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0T1_9STRA)

HSP 1 Score: 215 bits (548), Expect = 2.070e-68
Identity = 108/177 (61.02%), Postives = 132/177 (74.58%), Query Frame = 0
Query:    1 MEDPGSSKLDVYSAKIRRTYQYWLDRSVIYTMWRWGLFFVSVCLFLLRIYLVKGWFIVTYGLGIFLLNNLIGFLSPQIDPESEGPGLPTSGSDE---FSRRLPEFQFWLSSQKGLLMAFGMTFFSLFDIPVFWPILLIYFIVLMFLTMKRQVKHMIKHKYVPWNWGKATYKGGASNG 174
            M++P  SK +V+ +++R T Q WLD S  Y   RW  F V + L++LR+YLV GWFI+TYGLGI LLNN IGFLSPQ+DPESEG  LPT  SDE   F RRLPEF+FWL+S + + ++F MTFF +FDIPVFWPILL+YF  L F TMKRQ+ HMIKHKYVPW WGK  Y G ++ G
Sbjct:   10 MDEP--SKFEVFQSQLRITTQQWLDWSTPYVTARWIFFVVLLSLYMLRVYLVNGWFIITYGLGIHLLNNFIGFLSPQMDPESEGATLPTFESDEPRPFRRRLPEFKFWLASARAVCLSFFMTFFQIFDIPVFWPILLLYFFALFFFTMKRQIMHMIKHKYVPWTWGKRRYTGKSAAG 184          
BLAST of Ec-27_004820.2 vs. uniprot
Match: A0A7R9YCX7_9STRA (Protein RER1 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCX7_9STRA)

HSP 1 Score: 213 bits (543), Expect = 1.110e-67
Identity = 110/171 (64.33%), Postives = 136/171 (79.53%), Query Frame = 0
Query:    7 SKLDVYSAKIRRTYQYWLDRSVIYTMWRWGLFFVSVCLFLLRIYLVKGWFIVTYGLGIFLLNNLIGFLSPQIDPESE---GPGLPTSGSD-----EFSRRLPEFQFWLSSQKGLLMAFGMTFFSLFDIPVFWPILLIYFIVLMFLTMKRQVKHMIKHKYVPWNWGKATYKG 169
            SKL+V+ AK+ RTYQ++LD+S IYT  RW  FF  + L+LLRIY+V G+F+VTY LGIFLLNNLIGFL+PQ+DPE++   G GLPT+ +D      F RRLPEFQFW S  KGL+  F MTFFS+FD+PVFWPILLIYFIVL  LTMKRQ++HMIK+KYVP++WGK  + G
Sbjct:    9 SKLEVFQAKLSRTYQHYLDKSAIYTAPRWLSFFGILALYLLRIYVVNGFFLVTYALGIFLLNNLIGFLTPQLDPEADRGDGLGLPTTNNDVDEFRPFERRLPEFQFWYSCIKGLVYCFMMTFFSVFDVPVFWPILLIYFIVLFSLTMKRQIQHMIKYKYVPFSWGKPKHTG 179          
BLAST of Ec-27_004820.2 vs. uniprot
Match: A0A835YJT4_9STRA (Lactonase, 7-bladed beta-propeller-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJT4_9STRA)

HSP 1 Score: 223 bits (569), Expect = 1.180e-66
Identity = 117/212 (55.19%), Postives = 141/212 (66.51%), Query Frame = 0
Query:    4 PGSSKLDVYSAKIRRTYQYWLDRSVIYTMWRWGLFFVSVCLFLLRIYLVKGWFIVTYGLGIFLLNNLIGFLSPQIDPESEGPGLPTSGSDEF---SRRLPEFQFWLSSQK------------------------------------------GLLMAFGMTFFSLFDIPVFWPILLIYFIVLMFLTMKRQVKHMIKHKYVPWNWGKATYKGG 170
            P   KL+   A++ RTYQ+WLDRSVIY   RW  F V + ++LLR+Y+++GWFIVTYGLGIFLLNN IGFLSPQ+DPE +GPGLPT+ +DEF   +RRLPEFQFW SS +                                          G+L A  MT FSLFD+PVFWPILL+YF+VL FLTMKRQ+KHMIKH+YVPWNWGKA Y+GG
Sbjct:    8 PTPGKLEQLRAQVSRTYQHWLDRSVIYHTGRWVGFGVLLGVYLLRVYIIQGWFIVTYGLGIFLLNNFIGFLSPQVDPEMDGPGLPTASTDEFRPFTRRLPEFQFWHSSTRDAAXXXXXXXXXXXXXXXXXXXSFRXXXXXXXXXXXXXXXXRGVLTALVMTHFSLFDVPVFWPILLVYFVVLFFLTMKRQIKHMIKHRYVPWNWGKAKYRGG 219          
BLAST of Ec-27_004820.2 vs. uniprot
Match: A0A7S2V4J3_9STRA (Protein RER1 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4J3_9STRA)

HSP 1 Score: 204 bits (519), Expect = 3.560e-64
Identity = 98/155 (63.23%), Postives = 123/155 (79.35%), Query Frame = 0
Query:   16 IRRTYQYWLDRSVIYTMWRWGLFFVSVCLFLLRIYLVKGWFIVTYGLGIFLLNNLIGFLSPQIDPESEGPGLPTSGSDEF---SRRLPEFQFWLSSQKGLLMAFGMTFFSLFDIPVFWPILLIYFIVLMFLTMKRQVKHMIKHKYVPWNWGKATY 167
            + R YQ++LD+S I+T+ RWG F + + ++ LR+YLV GW+IVTYGLGIFLLNN IGFLSPQ+DP+S+GP LP+  SDEF   +RRLPEFQFW +  + +++AF MTFF +FDIPVFWPILL YF VL  LTMKRQ+KHMI H YVPWN GK  +
Sbjct:   16 LSRRYQHFLDKSTIHTVPRWGFFILCLGIYALRVYLVNGWYIVTYGLGIFLLNNFIGFLSPQVDPDSDGPVLPSKDSDEFRPFTRRLPEFQFWHACTRAVIIAFFMTFFKVFDIPVFWPILLFYFFVLFVLTMKRQIKHMITHGYVPWNRGKQRF 170          
BLAST of Ec-27_004820.2 vs. uniprot
Match: F0YLH9_AURAN (Protein RER1 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLH9_AURAN)

HSP 1 Score: 202 bits (513), Expect = 2.810e-63
Identity = 106/186 (56.99%), Postives = 136/186 (73.12%), Query Frame = 0
Query:    3 DPGSSKLDVYSAKIRRTYQYWLDRSVIYTMWRWGLFFVSVCLFLLRIYLVKGWFIVTYGLGIFLLNNLIGFLSPQIDPESEGPGLPTSGSDEF---SRRLPEFQFWLSSQKGLLMAFGMTFFSLFDIPVFWPILLIYFIVLMFLTMKRQVKHMIKHKYVPWNWGKATYKGGASNGTGGGKPFKNNK 185
            D   S  D + A +++ +Q +LDRS ++ +       V++ ++  R+Y+V GWFIVTYGLGIFLLNN IGFLSPQ+DPES+GP LP SG  +F   SRR+PEF+FW SS KG+++AF MTFFS   IPVFWPILLIYF  L FLTMKRQ+KHMIKHKYVPW+WGK +Y     +G G  +P K++K
Sbjct:    4 DEQPSAADSFRAGVQQKFQVFLDRSTVHLV-------VALAVYACRVYVVNGWFIVTYGLGIFLLNNFIGFLSPQVDPESDGPLLPVSGDGDFKPFSRRVPEFKFWYSSTKGVVVAFFMTFFS---IPVFWPILLIYFFALFFLTMKRQIKHMIKHKYVPWSWGKKSY----LDGGGTARPAKDDK 175          
BLAST of Ec-27_004820.2 vs. uniprot
Match: A0A1E7FRY9_9STRA (Protein RER1 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FRY9_9STRA)

HSP 1 Score: 201 bits (512), Expect = 7.860e-63
Identity = 105/185 (56.76%), Postives = 134/185 (72.43%), Query Frame = 0
Query:    2 EDP-GSSKLDVYSAKIRRTYQYWLDRSVIYTMWRWGLFFVSVCLFLLRIYLVKGWFIVTYGLGIFLLNNLIGFLSPQIDPESEGPGLPTSGSD-----EFSRRLPEFQFWLSSQKGLLMAFGMTFFSLFDIPVFWPILLIYFIVLMFLTMKRQVKHMIKHKYVPWNWGKATYK--GGASNGTGGG 178
            +DP GS   D +SA  +R  QYW+D+S I+ + RW LF   + +F LRIYL++G+FIV YGLGIFLLNN I FLSP  DP   GPGLP++ S+      F+RRLPEF+FW++  +G + +  MTFFS+FDIPVFWPILL+YF VL F+TMKRQ+ HM KHKYVP +WGK+ YK  G  +N  GGG
Sbjct:    7 DDPEGSQSFDQHSANFKRMTQYWMDKSTIHVVPRWCLFAFLLLMFFLRIYLIQGYFIVAYGLGIFLLNNFIAFLSPLEDPTDNGPGLPSTESEGKEYRPFTRRLPEFKFWMACTRGTITSIFMTFFSVFDIPVFWPILLMYFFVLFFMTMKRQILHMYKHKYVPISWGKSKYKDAGVENNMFGGG 191          
BLAST of Ec-27_004820.2 vs. uniprot
Match: A0A7S2FFP1_9STRA (Protein RER1 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FFP1_9STRA)

HSP 1 Score: 199 bits (507), Expect = 2.790e-62
Identity = 98/175 (56.00%), Postives = 128/175 (73.14%), Query Frame = 0
Query:    1 MEDPGSSKLDVYSAKIRRTYQYWLDRSVIYTMWRWGLFFVSVCLFLLRIYLVKGWFIVTYGLGIFLLNNLIGFLSPQIDPESEGPGLPTSGSDEF---SRRLPEFQFWLSSQKGLLMAFGMTFFSLFDIPVFWPILLIYFIVLMFLTMKRQVKHMIKHKYVPWNWGKATYKGGAS 172
            M+    S +  ++AK    +Q  LDRS  + + RW  F   + ++ LR+YLV GW+I+TYGLGI+LLNNLIGFLSPQ+DP+SEGP LPT  S+EF   SRRLPEF+FW +S + + ++F +TFF +FDIPVFWPILL+YFI L  LTMKRQ+KHM+KH YVPW  GK  + GG +
Sbjct:    1 MQQEPPSSISGFNAKFNSQFQMLLDRSTPHIVGRWIAFVFLMGIYTLRVYLVNGWYIITYGLGIYLLNNLIGFLSPQVDPDSEGPCLPTRDSEEFRPFSRRLPEFKFWYASARAVCVSFFLTFFQIFDIPVFWPILLLYFIALFILTMKRQIKHMMKHNYVPWASGKKRFTGGGA 175          
BLAST of Ec-27_004820.2 vs. uniprot
Match: A0A8J2X2Q3_9STRA (Protein RER1 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X2Q3_9STRA)

HSP 1 Score: 197 bits (501), Expect = 3.130e-61
Identity = 104/169 (61.54%), Postives = 128/169 (75.74%), Query Frame = 0
Query:   10 DVYSAKIRRTYQYWLDRSVIYTMWRWGLFF--VSVCLFL--LRIYLVKGWFIVTYGLGIFLLNNLIGFLSPQIDPESEGPGLPTSGSDEF---SRRLPEFQFWLSSQKGLLMAFGMTFFSLFDIPVFW----PILLIYFIVLMFLTMKRQVKHMIKHKYVPWNWGKATY 167
            +V S+ I +  Q  LDRS ++ + RW  F    +VCL L  LR+Y+++GWFIVTYGLGIFLLNN IGFLSPQIDP+ +GP LPTS  D F   SRR+PEF+FW +S KG+  AF MTFFS+FD+PVFW    PILL+YF  L FLTMKRQ+KHMIKH+YVPW+WGK +Y
Sbjct:   12 EVVSSGIAQRLQQLLDRSTVHILPRWLGFARPSAVCLALYGLRVYIIQGWFIVTYGLGIFLLNNFIGFLSPQIDPDGDGPLLPTSTGDNFKPFSRRVPEFKFWYTSIKGVCTAFFMTFFSIFDVPVFWHSAVPILLVYFFALFFLTMKRQIKHMIKHEYVPWSWGKKSY 180          
The following BLAST results are available for this feature:
BLAST of Ec-27_004820.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB85_ECTSI4.300e-13098.40Protein RER1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A7S3K339_9STRA1.070e-6862.29Protein RER1 n=1 Tax=Aureoumbra lagunensis TaxID=4... [more]
A0A7S2W0T1_9STRA2.070e-6861.02Protein RER1 n=1 Tax=Rhizochromulina marina TaxID=... [more]
A0A7R9YCX7_9STRA1.110e-6764.33Protein RER1 n=1 Tax=Pinguiococcus pyrenoidosus Ta... [more]
A0A835YJT4_9STRA1.180e-6655.19Lactonase, 7-bladed beta-propeller-domain-containi... [more]
A0A7S2V4J3_9STRA3.560e-6463.23Protein RER1 n=1 Tax=Fibrocapsa japonica TaxID=946... [more]
F0YLH9_AURAN2.810e-6356.99Protein RER1 n=1 Tax=Aureococcus anophagefferens T... [more]
A0A1E7FRY9_9STRA7.860e-6356.76Protein RER1 n=1 Tax=Fragilariopsis cylindrus CCMP... [more]
A0A7S2FFP1_9STRA2.790e-6256.00Protein RER1 n=1 Tax=Dictyocha speculum TaxID=3568... [more]
A0A8J2X2Q3_9STRA3.130e-6161.54Protein RER1 n=1 Tax=Pelagomonas calceolata TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004932Retrieval of early ER protein Rer1PFAMPF03248Rer1coord: 14..168
e-value: 3.3E-60
score: 202.7
IPR004932Retrieval of early ER protein Rer1PIRSFPIRSF016013AtER_Rer1pcoord: 1..178
e-value: 7.1E-66
score: 219.5
IPR004932Retrieval of early ER protein Rer1PANTHERPTHR10743PROTEIN RER1coord: 13..170
NoneNo IPR availablePANTHERPTHR10743:SF0PROTEIN RER1coord: 13..170
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..31
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..51
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..78
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 144..185
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 112..143
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 79..111
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 52..57
NoneNo IPR availableTMHMMTMhelixcoord: 29..51
NoneNo IPR availableTMHMMTMhelixcoord: 121..143
NoneNo IPR availableTMHMMTMhelixcoord: 56..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:4276763..4282326 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_004820.2Ec-27_004820.2Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_27 4275024..4282352 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-27_004820.2 ID=Ec-27_004820.2|Name=Ec-27_004820.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=186bp
MEDPGSSKLDVYSAKIRRTYQYWLDRSVIYTMWRWGLFFVSVCLFLLRIY
LVKGWFIVTYGLGIFLLNNLIGFLSPQIDPESEGPGLPTSGSDEFSRRLP
EFQFWLSSQKGLLMAFGMTFFSLFDIPVFWPILLIYFIVLMFLTMKRQVK
HMIKHKYVPWNWGKATYKGGASNGTGGGKPFKNNK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004932Rer1