Ec-27_004820.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-27_004820.1
Unique NameEc-27_004820.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length189
Homology
BLAST of Ec-27_004820.1 vs. uniprot
Match: D8LB85_ECTSI (Protein RER1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB85_ECTSI)

HSP 1 Score: 383 bits (983), Expect = 1.290e-134
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0
Query:    1 MEDPGSSKLDVYSAKIRRTYQYWLDRSVIYTMWRWGLFFVSVCLFLLRIYLVKGWFIVTYGLGIFLLNNLIGFLSPQIDPESEGPGLPTSGSDEFRPFSRRLPEFQFWLSSQKGLLMAFGMTFFSLFDIPVFWPILLIYFIVLMFLTMKRQVKHMIKHKYVPWNWGKATYKGGASNGTGGGKPFKNNK 188
            MEDPGSSKLDVYSAKIRRTYQYWLDRSVIYTMWRWGLFFVSVCLFLLRIYLVKGWFIVTYGLGIFLLNNLIGFLSPQIDPESEGPGLPTSGSDEFRPFSRRLPEFQFWLSSQKGLLMAFGMTFFSLFDIPVFWPILLIYFIVLMFLTMKRQVKHMIKHKYVPWNWGKATYKGGASNGTGGGKPFKNNK
Sbjct:    1 MEDPGSSKLDVYSAKIRRTYQYWLDRSVIYTMWRWGLFFVSVCLFLLRIYLVKGWFIVTYGLGIFLLNNLIGFLSPQIDPESEGPGLPTSGSDEFRPFSRRLPEFQFWLSSQKGLLMAFGMTFFSLFDIPVFWPILLIYFIVLMFLTMKRQVKHMIKHKYVPWNWGKATYKGGASNGTGGGKPFKNNK 188          
BLAST of Ec-27_004820.1 vs. uniprot
Match: A0A7S3K339_9STRA (Protein RER1 n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K339_9STRA)

HSP 1 Score: 226 bits (576), Expect = 1.910e-72
Identity = 113/175 (64.57%), Postives = 140/175 (80.00%), Query Frame = 0
Query:    7 SKLDVYSAKIRRTYQYWLDRSVIYTMWRWGLFFVSVCLFLLRIYLVKGWFIVTYGLGIFLLNNLIGFLSPQIDPESEGPGLPTSGSD-EFRPFSRRLPEFQFWLSSQKGLLMAFGMTFFSLFDIPVFWPILLIYFIVLMFLTMKRQVKHMIKHKYVPWNWGKATYKGGASNGTGG 180
            S ++ +  KI+R +Q  LD S +Y + RW +FFV + ++++R   + GW+IVTYGLGIFLLNN IGFLSPQ+DPE+EGP LPTS  D EFRPFSRR+PEF+FW SS KG+L+AF MTFFS FDIPVFWPILL+Y+I L+FLTMKRQ+KHMIKHKYVPW++GKA Y   A  G GG
Sbjct:   17 SGIEKFLVKIQRQFQRILDISTVYVITRWLIFFVCILIYVIRTASINGWYIVTYGLGIFLLNNFIGFLSPQMDPENEGPVLPTSSDDAEFRPFSRRVPEFKFWYSSTKGVLIAFVMTFFSFFDIPVFWPILLLYWIALVFLTMKRQIKHMIKHKYVPWSYGKAKY--AAPGGAGG 189          
BLAST of Ec-27_004820.1 vs. uniprot
Match: A0A7R9YCX7_9STRA (Protein RER1 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCX7_9STRA)

HSP 1 Score: 223 bits (568), Expect = 1.980e-71
Identity = 114/171 (66.67%), Postives = 140/171 (81.87%), Query Frame = 0
Query:    7 SKLDVYSAKIRRTYQYWLDRSVIYTMWRWGLFFVSVCLFLLRIYLVKGWFIVTYGLGIFLLNNLIGFLSPQIDPESE---GPGLPTSGSD--EFRPFSRRLPEFQFWLSSQKGLLMAFGMTFFSLFDIPVFWPILLIYFIVLMFLTMKRQVKHMIKHKYVPWNWGKATYKG 172
            SKL+V+ AK+ RTYQ++LD+S IYT  RW  FF  + L+LLRIY+V G+F+VTY LGIFLLNNLIGFL+PQ+DPE++   G GLPT+ +D  EFRPF RRLPEFQFW S  KGL+  F MTFFS+FD+PVFWPILLIYFIVL  LTMKRQ++HMIK+KYVP++WGK  + G
Sbjct:    9 SKLEVFQAKLSRTYQHYLDKSAIYTAPRWLSFFGILALYLLRIYVVNGFFLVTYALGIFLLNNLIGFLTPQLDPEADRGDGLGLPTTNNDVDEFRPFERRLPEFQFWYSCIKGLVYCFMMTFFSVFDVPVFWPILLIYFIVLFSLTMKRQIQHMIKYKYVPFSWGKPKHTG 179          
BLAST of Ec-27_004820.1 vs. uniprot
Match: A0A7S2W0T1_9STRA (Protein RER1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0T1_9STRA)

HSP 1 Score: 223 bits (568), Expect = 2.110e-71
Identity = 110/177 (62.15%), Postives = 134/177 (75.71%), Query Frame = 0
Query:    1 MEDPGSSKLDVYSAKIRRTYQYWLDRSVIYTMWRWGLFFVSVCLFLLRIYLVKGWFIVTYGLGIFLLNNLIGFLSPQIDPESEGPGLPTSGSDEFRPFSRRLPEFQFWLSSQKGLLMAFGMTFFSLFDIPVFWPILLIYFIVLMFLTMKRQVKHMIKHKYVPWNWGKATYKGGASNG 177
            M++P  SK +V+ +++R T Q WLD S  Y   RW  F V + L++LR+YLV GWFI+TYGLGI LLNN IGFLSPQ+DPESEG  LPT  SDE RPF RRLPEF+FWL+S + + ++F MTFF +FDIPVFWPILL+YF  L F TMKRQ+ HMIKHKYVPW WGK  Y G ++ G
Sbjct:   10 MDEP--SKFEVFQSQLRITTQQWLDWSTPYVTARWIFFVVLLSLYMLRVYLVNGWFIITYGLGIHLLNNFIGFLSPQMDPESEGATLPTFESDEPRPFRRRLPEFKFWLASARAVCLSFFMTFFQIFDIPVFWPILLLYFFALFFFTMKRQIMHMIKHKYVPWTWGKRRYTGKSAAG 184          
BLAST of Ec-27_004820.1 vs. uniprot
Match: A0A835YJT4_9STRA (Lactonase, 7-bladed beta-propeller-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJT4_9STRA)

HSP 1 Score: 235 bits (599), Expect = 5.000e-71
Identity = 120/212 (56.60%), Postives = 144/212 (67.92%), Query Frame = 0
Query:    4 PGSSKLDVYSAKIRRTYQYWLDRSVIYTMWRWGLFFVSVCLFLLRIYLVKGWFIVTYGLGIFLLNNLIGFLSPQIDPESEGPGLPTSGSDEFRPFSRRLPEFQFWLSSQK------------------------------------------GLLMAFGMTFFSLFDIPVFWPILLIYFIVLMFLTMKRQVKHMIKHKYVPWNWGKATYKGG 173
            P   KL+   A++ RTYQ+WLDRSVIY   RW  F V + ++LLR+Y+++GWFIVTYGLGIFLLNN IGFLSPQ+DPE +GPGLPT+ +DEFRPF+RRLPEFQFW SS +                                          G+L A  MT FSLFD+PVFWPILL+YF+VL FLTMKRQ+KHMIKH+YVPWNWGKA Y+GG
Sbjct:    8 PTPGKLEQLRAQVSRTYQHWLDRSVIYHTGRWVGFGVLLGVYLLRVYIIQGWFIVTYGLGIFLLNNFIGFLSPQVDPEMDGPGLPTASTDEFRPFTRRLPEFQFWHSSTRDAAXXXXXXXXXXXXXXXXXXXSFRXXXXXXXXXXXXXXXXRGVLTALVMTHFSLFDVPVFWPILLVYFVVLFFLTMKRQIKHMIKHRYVPWNWGKAKYRGG 219          
BLAST of Ec-27_004820.1 vs. uniprot
Match: A0A7S2V4J3_9STRA (Protein RER1 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4J3_9STRA)

HSP 1 Score: 216 bits (549), Expect = 1.100e-68
Identity = 101/155 (65.16%), Postives = 126/155 (81.29%), Query Frame = 0
Query:   16 IRRTYQYWLDRSVIYTMWRWGLFFVSVCLFLLRIYLVKGWFIVTYGLGIFLLNNLIGFLSPQIDPESEGPGLPTSGSDEFRPFSRRLPEFQFWLSSQKGLLMAFGMTFFSLFDIPVFWPILLIYFIVLMFLTMKRQVKHMIKHKYVPWNWGKATY 170
            + R YQ++LD+S I+T+ RWG F + + ++ LR+YLV GW+IVTYGLGIFLLNN IGFLSPQ+DP+S+GP LP+  SDEFRPF+RRLPEFQFW +  + +++AF MTFF +FDIPVFWPILL YF VL  LTMKRQ+KHMI H YVPWN GK  +
Sbjct:   16 LSRRYQHFLDKSTIHTVPRWGFFILCLGIYALRVYLVNGWYIVTYGLGIFLLNNFIGFLSPQVDPDSDGPVLPSKDSDEFRPFTRRLPEFQFWHACTRAVIIAFFMTFFKVFDIPVFWPILLFYFFVLFVLTMKRQIKHMITHGYVPWNRGKQRF 170          
BLAST of Ec-27_004820.1 vs. uniprot
Match: F0YLH9_AURAN (Protein RER1 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLH9_AURAN)

HSP 1 Score: 212 bits (540), Expect = 2.490e-67
Identity = 108/186 (58.06%), Postives = 139/186 (74.73%), Query Frame = 0
Query:    3 DPGSSKLDVYSAKIRRTYQYWLDRSVIYTMWRWGLFFVSVCLFLLRIYLVKGWFIVTYGLGIFLLNNLIGFLSPQIDPESEGPGLPTSGSDEFRPFSRRLPEFQFWLSSQKGLLMAFGMTFFSLFDIPVFWPILLIYFIVLMFLTMKRQVKHMIKHKYVPWNWGKATYKGGASNGTGGGKPFKNNK 188
            D   S  D + A +++ +Q +LDRS ++ +       V++ ++  R+Y+V GWFIVTYGLGIFLLNN IGFLSPQ+DPES+GP LP SG  +F+PFSRR+PEF+FW SS KG+++AF MTFFS   IPVFWPILLIYF  L FLTMKRQ+KHMIKHKYVPW+WGK +Y     +G G  +P K++K
Sbjct:    4 DEQPSAADSFRAGVQQKFQVFLDRSTVHLV-------VALAVYACRVYVVNGWFIVTYGLGIFLLNNFIGFLSPQVDPESDGPLLPVSGDGDFKPFSRRVPEFKFWYSSTKGVVVAFFMTFFS---IPVFWPILLIYFFALFFLTMKRQIKHMIKHKYVPWSWGKKSY----LDGGGTARPAKDDK 175          
BLAST of Ec-27_004820.1 vs. uniprot
Match: A0A7S2FFP1_9STRA (Protein RER1 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FFP1_9STRA)

HSP 1 Score: 211 bits (537), Expect = 8.650e-67
Identity = 101/175 (57.71%), Postives = 131/175 (74.86%), Query Frame = 0
Query:    1 MEDPGSSKLDVYSAKIRRTYQYWLDRSVIYTMWRWGLFFVSVCLFLLRIYLVKGWFIVTYGLGIFLLNNLIGFLSPQIDPESEGPGLPTSGSDEFRPFSRRLPEFQFWLSSQKGLLMAFGMTFFSLFDIPVFWPILLIYFIVLMFLTMKRQVKHMIKHKYVPWNWGKATYKGGAS 175
            M+    S +  ++AK    +Q  LDRS  + + RW  F   + ++ LR+YLV GW+I+TYGLGI+LLNNLIGFLSPQ+DP+SEGP LPT  S+EFRPFSRRLPEF+FW +S + + ++F +TFF +FDIPVFWPILL+YFI L  LTMKRQ+KHM+KH YVPW  GK  + GG +
Sbjct:    1 MQQEPPSSISGFNAKFNSQFQMLLDRSTPHIVGRWIAFVFLMGIYTLRVYLVNGWYIITYGLGIYLLNNLIGFLSPQVDPDSEGPCLPTRDSEEFRPFSRRLPEFKFWYASARAVCVSFFLTFFQIFDIPVFWPILLLYFIALFILTMKRQIKHMMKHNYVPWASGKKRFTGGGA 175          
BLAST of Ec-27_004820.1 vs. uniprot
Match: A0A1E7FRY9_9STRA (Protein RER1 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FRY9_9STRA)

HSP 1 Score: 210 bits (534), Expect = 4.020e-66
Identity = 108/185 (58.38%), Postives = 138/185 (74.59%), Query Frame = 0
Query:    2 EDP-GSSKLDVYSAKIRRTYQYWLDRSVIYTMWRWGLFFVSVCLFLLRIYLVKGWFIVTYGLGIFLLNNLIGFLSPQIDPESEGPGLPTSGSD--EFRPFSRRLPEFQFWLSSQKGLLMAFGMTFFSLFDIPVFWPILLIYFIVLMFLTMKRQVKHMIKHKYVPWNWGKATYK--GGASNGTGGG 181
            +DP GS   D +SA  +R  QYW+D+S I+ + RW LF   + +F LRIYL++G+FIV YGLGIFLLNN I FLSP  DP   GPGLP++ S+  E+RPF+RRLPEF+FW++  +G + +  MTFFS+FDIPVFWPILL+YF VL F+TMKRQ+ HM KHKYVP +WGK+ YK  G  +N  GGG
Sbjct:    7 DDPEGSQSFDQHSANFKRMTQYWMDKSTIHVVPRWCLFAFLLLMFFLRIYLIQGYFIVAYGLGIFLLNNFIAFLSPLEDPTDNGPGLPSTESEGKEYRPFTRRLPEFKFWMACTRGTITSIFMTFFSVFDIPVFWPILLMYFFVLFFMTMKRQILHMYKHKYVPISWGKSKYKDAGVENNMFGGG 191          
BLAST of Ec-27_004820.1 vs. uniprot
Match: A0A8J2X2Q3_9STRA (Protein RER1 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X2Q3_9STRA)

HSP 1 Score: 207 bits (528), Expect = 2.790e-65
Identity = 106/169 (62.72%), Postives = 131/169 (77.51%), Query Frame = 0
Query:   10 DVYSAKIRRTYQYWLDRSVIYTMWRWGLFF--VSVCLFL--LRIYLVKGWFIVTYGLGIFLLNNLIGFLSPQIDPESEGPGLPTSGSDEFRPFSRRLPEFQFWLSSQKGLLMAFGMTFFSLFDIPVFW----PILLIYFIVLMFLTMKRQVKHMIKHKYVPWNWGKATY 170
            +V S+ I +  Q  LDRS ++ + RW  F    +VCL L  LR+Y+++GWFIVTYGLGIFLLNN IGFLSPQIDP+ +GP LPTS  D F+PFSRR+PEF+FW +S KG+  AF MTFFS+FD+PVFW    PILL+YF  L FLTMKRQ+KHMIKH+YVPW+WGK +Y
Sbjct:   12 EVVSSGIAQRLQQLLDRSTVHILPRWLGFARPSAVCLALYGLRVYIIQGWFIVTYGLGIFLLNNFIGFLSPQIDPDGDGPLLPTSTGDNFKPFSRRVPEFKFWYTSIKGVCTAFFMTFFSIFDVPVFWHSAVPILLVYFFALFFLTMKRQIKHMIKHEYVPWSWGKKSY 180          
The following BLAST results are available for this feature:
BLAST of Ec-27_004820.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB85_ECTSI1.290e-134100.00Protein RER1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A7S3K339_9STRA1.910e-7264.57Protein RER1 n=1 Tax=Aureoumbra lagunensis TaxID=4... [more]
A0A7R9YCX7_9STRA1.980e-7166.67Protein RER1 n=1 Tax=Pinguiococcus pyrenoidosus Ta... [more]
A0A7S2W0T1_9STRA2.110e-7162.15Protein RER1 n=1 Tax=Rhizochromulina marina TaxID=... [more]
A0A835YJT4_9STRA5.000e-7156.60Lactonase, 7-bladed beta-propeller-domain-containi... [more]
A0A7S2V4J3_9STRA1.100e-6865.16Protein RER1 n=1 Tax=Fibrocapsa japonica TaxID=946... [more]
F0YLH9_AURAN2.490e-6758.06Protein RER1 n=1 Tax=Aureococcus anophagefferens T... [more]
A0A7S2FFP1_9STRA8.650e-6757.71Protein RER1 n=1 Tax=Dictyocha speculum TaxID=3568... [more]
A0A1E7FRY9_9STRA4.020e-6658.38Protein RER1 n=1 Tax=Fragilariopsis cylindrus CCMP... [more]
A0A8J2X2Q3_9STRA2.790e-6562.72Protein RER1 n=1 Tax=Pelagomonas calceolata TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004932Retrieval of early ER protein Rer1PFAMPF03248Rer1coord: 14..171
e-value: 1.2E-65
score: 220.4
IPR004932Retrieval of early ER protein Rer1PIRSFPIRSF016013AtER_Rer1pcoord: 1..181
e-value: 3.4E-71
score: 236.8
IPR004932Retrieval of early ER protein Rer1PANTHERPTHR10743PROTEIN RER1coord: 13..173
NoneNo IPR availablePANTHERPTHR10743:SF0PROTEIN RER1coord: 13..173
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..31
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..51
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..78
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 115..146
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 52..57
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 147..188
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 79..114
NoneNo IPR availableTMHMMTMhelixcoord: 29..51
NoneNo IPR availableTMHMMTMhelixcoord: 56..78
NoneNo IPR availableTMHMMTMhelixcoord: 124..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:4276763..4282326 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_004820.1Ec-27_004820.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_27 4276763..4282326 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-27_004820.1 ID=Ec-27_004820.1|Name=Ec-27_004820.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=189bp
MEDPGSSKLDVYSAKIRRTYQYWLDRSVIYTMWRWGLFFVSVCLFLLRIY
LVKGWFIVTYGLGIFLLNNLIGFLSPQIDPESEGPGLPTSGSDEFRPFSR
RLPEFQFWLSSQKGLLMAFGMTFFSLFDIPVFWPILLIYFIVLMFLTMKR
QVKHMIKHKYVPWNWGKATYKGGASNGTGGGKPFKNNK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004932Rer1