Ec-27_004530.3 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-27_004530.3
Unique NameEc-27_004530.3
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length417
Homology
BLAST of Ec-27_004530.3 vs. uniprot
Match: D8LBB5_ECTSI (Essential abundant protein involved in regulation of transcription n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBB5_ECTSI)

HSP 1 Score: 432 bits (1112), Expect = 2.420e-133
Identity = 246/252 (97.62%), Postives = 246/252 (97.62%), Query Frame = 0
Query:  165 RSXSSRAPAESTGKGGKPPPTTTTRGKGSLPRQEEATTAGDGVASPLPGRKCLVFAQHKAALDVTESALLRPCFPGVKYLRMDGSVSQAERAAAVDRFSADPSVAILLLTTRVGHLGLNLSAASMVVFLEHDWNPQVDLQAMDRAHRLGQRKAVNVYRLIAADSVEQRVLRLQGHKLQVAAAVVSRENASAFSSGTGGVLGMLGEAMAVVAXXXXXXXXXXXXDGESVELWSADEDYAYLAAERLADSVARE 416
            RS SSRAPAESTGKGGKP     TRGKGSLPRQEEATTAGDGVASPLPGRKCLVFAQHKAALDVTESALLRPCFPGVKYLRMDGSVSQAERAAAVDRFSADPSVAILLLTTRVGHLGLNLSAASMVVFLEHDWNPQVDLQAMDRAHRLGQRKAVNVYRLIAADSVEQRVLRLQGHKLQVAAAVVSRENASAFSSGTGGVLGMLGEAMAVVAXXXXXXXXXXXXDGESVELWSADEDYAYLAAERLADSVARE
Sbjct: 2080 RSSSSRAPAESTGKGGKPXXXXXTRGKGSLPRQEEATTAGDGVASPLPGRKCLVFAQHKAALDVTESALLRPCFPGVKYLRMDGSVSQAERAAAVDRFSADPSVAILLLTTRVGHLGLNLSAASMVVFLEHDWNPQVDLQAMDRAHRLGQRKAVNVYRLIAADSVEQRVLRLQGHKLQVAAAVVSRENASAFSSGTGGVLGMLGEAMAVVAXXXXXXXXXXXXDGESVELWSADEDYAYLAAERLADSVARE 2331          
BLAST of Ec-27_004530.3 vs. uniprot
Match: A0A6H5J4R7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4R7_9PHAE)

HSP 1 Score: 352 bits (904), Expect = 6.200e-106
Identity = 236/313 (75.40%), Postives = 242/313 (77.32%), Query Frame = 0
Query:    1 MSADVKLSGKLMALRELLWDAGIGKRQTSVSFGGXXXXXXXXXXXXXXXXXXXXXXXXDTGTMDDSXXXXXXXXXXXXXXXXXRAERAVNDGKRQRSLEQRXXXXXXXXXXXXXXXRPEGGGSRAGHTNPNLAKAGPNSSTSSPGKPDTKRSTVGTAGSSARAARSXSSRAPAESTGKGGKPPPTTTTRGKGSLPRQEEATTAGDGVASPLPGRKCLVFAQHKAALDVTESALLRPCFPGVKYLRMDGSVSQAERAAAVDRFSADPSVAILLLTTRVGHLGLNLSAASMVVFLEHDWNPQVDLQAMDRAHRLG 313
            MS DVKLSGKLMALRELLWDAGIGK + SV  G                         DTGT+DD XXXXXXXXXXXXXXXXX                  XXXXXX          PEGGGSRAG+TNP+ AKAGPNSSTSSPGK DTKR TVGTAGSS RAARS SSRAPAESTGKGGKPPPT+TTRGKGSLPRQEEATTAGDGVASPLPG KCL+FAQHKAALDVTESALLRPCFPGVKYLRMDGSVSQAERAAAVDRFSADPSVAILLLTTRVGHLGLNLSAASMVVFLEHDWNPQVDLQ    A  LG
Sbjct: 1280 MSEDVKLSGKLMALRELLWDAGIGKSE-SVDIGSSDS---------------------DTGTVDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXRKRGRNSRGGPEGGGSRAGYTNPSPAKAGPNSSTSSPGKLDTKRPTVGTAGSSVRAARSSSSRAPAESTGKGGKPPPTSTTRGKGSLPRQEEATTAGDGVASPLPGCKCLIFAQHKAALDVTESALLRPCFPGVKYLRMDGSVSQAERAAAVDRFSADPSVAILLLTTRVGHLGLNLSAASMVVFLEHDWNPQVDLQVRGCAGVLG 1567          
BLAST of Ec-27_004530.3 vs. uniprot
Match: A0A835Z4M3_9STRA (SNF2 family N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4M3_9STRA)

HSP 1 Score: 194 bits (494), Expect = 1.080e-52
Identity = 116/209 (55.50%), Postives = 142/209 (67.94%), Query Frame = 0
Query:  205 DGVASPLPGRKCLVFAQHKAALDVTESALLRPCFPGVKYLRMDGSVSQAERAAAVDRFSADPSVAILLLTTRVGHLGLNLSAASMVVFLEHDWNPQVDLQAMDRAHRLGQRKAVNVYRLIAADSVEQRVLRLQGHKLQVAAAVVSRENASAFSSGTGGVLGMLGEAMAVVAXXXXXXXXXXXXDGESVELWSADEDYAYLAAERLADSV 413
            +GV   L  RKCLVFAQHKAALD  E  LLR   P VKYLR+DGS+ Q  RAA ++RF++D +V++LLLTT VG LGLNL+ A  V+FLEH WNPQVDLQAMDRAHR+GQR+AVNVYRL+A  +VE+R+L LQ  KL  A  VV ++NAS +S  T  VL +   A  + A       XXXXX   + E     ++YA   AER A SV
Sbjct:  374 EGVQQQLQ-RKCLVFAQHKAALDAAEQCLLRQHLPSVKYLRIDGSIGQDARAAVLERFTSDAAVSLLLLTTAVGGLGLNLTVADTVIFLEHHWNPQVDLQAMDRAHRIGQRRAVNVYRLVATGTVEERILLLQAGKLATAEKVVGKDNASLWSLDTDSVLQLFNAA--IDASGAADGSXXXXXXXAAAEERQLQDEYASFDAERFAVSV 579          
BLAST of Ec-27_004530.3 vs. uniprot
Match: B5YN14_THAPS (Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YN14_THAPS)

HSP 1 Score: 163 bits (413), Expect = 1.870e-45
Identity = 80/146 (54.79%), Postives = 107/146 (73.29%), Query Frame = 0
Query:  215 KCLVFAQHKAALDVTESALLRPCFPGVKYLRMDGSVSQAERAAAVDRFSADPSVAILLLTTRVGHLGLNLSAASMVVFLEHDWNPQVDLQAMDRAHRLGQRKAVNVYRLIAADSVEQRVLRLQGHKLQVAAAVVSRENASAFSSGT 360
            KCL+FAQ   +LDV E  L  P  P ++YLR+DG V    R+A V+RF+ D ++ +LLLTT+VG LGLNL+ A  V+FLE DWNP VDLQAMDRAHR+GQ K VNVYRLI  D++E+++++LQ  K   + AVV+ EN++ +S GT
Sbjct:    1 KCLIFAQFTQSLDVVERFLFEPHMPSLEYLRLDGKVPSNRRSAIVERFNHDDNIKVLLLTTKVGGLGLNLTGADKVIFLEPDWNPFVDLQAMDRAHRIGQTKTVNVYRLITTDTIEEKIMKLQQRKQTTSDAVVNTENSTMYSMGT 146          
BLAST of Ec-27_004530.3 vs. uniprot
Match: A0A7S2URQ5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2URQ5_9STRA)

HSP 1 Score: 176 bits (446), Expect = 2.440e-45
Identity = 82/155 (52.90%), Postives = 118/155 (76.13%), Query Frame = 0
Query:  206 GVASPLPGRKCLVFAQHKAALDVTESALLRPCFPGVKYLRMDGSVSQAERAAAVDRFSADPSVAILLLTTRVGHLGLNLSAASMVVFLEHDWNPQVDLQAMDRAHRLGQRKAVNVYRLIAADSVEQRVLRLQGHKLQVAAAVVSRENASAFSSGT 360
            G+ S     KCL+FAQ   +LDV E  L  P  P ++YLR+DG V  A+R+A VD+F+ D S+ +LLLTTR+G LGLNL+ A +V+FLEHDWNP VD+QAMDRAHR+GQ+K V+VYRL+ + ++E+++++LQG KL ++ A+V+ EN++ +S GT
Sbjct:  463 GLDSLQSSSKCLIFAQFTQSLDVVEQFLFEPHMPSLRYLRLDGRVPVADRSAIVDQFNQDESIKVLLLTTRIGGLGLNLTGADIVIFLEHDWNPHVDIQAMDRAHRIGQKKTVHVYRLVTSGTIEEKIMKLQGVKLAMSEAIVNSENSTMYSMGT 617          
BLAST of Ec-27_004530.3 vs. uniprot
Match: A0A7R9Z664_9STRA (Hypothetical protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z664_9STRA)

HSP 1 Score: 173 bits (439), Expect = 3.640e-45
Identity = 86/166 (51.81%), Postives = 116/166 (69.88%), Query Frame = 0
Query:  195 PRQEEATTAGDGVASPLPGRKCLVFAQHKAALDVTESALLRPCFPGVKYLRMDGSVSQAERAAAVDRFSADPSVAILLLTTRVGHLGLNLSAASMVVFLEHDWNPQVDLQAMDRAHRLGQRKAVNVYRLIAADSVEQRVLRLQGHKLQVAAAVVSRENASAFSSGT 360
            P  E   T  + V     G KCL+FAQ   +LD+ E  L RP  P ++YLR+DG V    R   V+RF++D S+  LLLTTRVG LGLNL+ A  V+FLEHDWNP VDLQAMDRAHR+GQ K VNVYRL+AA ++E++++++Q  KL ++ A+V+ +N++ FS GT
Sbjct:  317 PVGEHLCTEEEDVDVKPHGSKCLIFAQFSQSLDIVEQYLFRPHMPSLRYLRLDGKVPPEGRTQIVERFNSDDSIKALLLTTRVGGLGLNLTGADTVIFLEHDWNPHVDLQAMDRAHRIGQTKTVNVYRLVAAGTIEEKIMKIQRSKLIMSNAIVNTDNSTMFSMGT 482          
BLAST of Ec-27_004530.3 vs. uniprot
Match: A0A7S0Z8Q0_9CHLO (Hypothetical protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0Z8Q0_9CHLO)

HSP 1 Score: 165 bits (418), Expect = 6.160e-45
Identity = 87/170 (51.18%), Postives = 119/170 (70.00%), Query Frame = 0
Query:  197 QEEATTAGDGVASPLPG--RKCLVFAQHKAALDVTESALLRPCFPGVKYLRMDGSVSQAERAAAVDRFSADPSVAILLLTTRVGHLGLNLSAASMVVFLEHDWNPQVDLQAMDRAHRLGQRKAVNVYRLIAADSVEQRVLRLQGHKLQVAAAVVSRENASAFSSGTGGVL 364
            +EE    G+   +P  G   + LVF+Q K+ LD+ E+ L       V +LR+DGSV+ ++R   V +F+ADPS+ +LLLTT VG LGLNL++A  VVFLEHDWNPQ DLQAMDRAHRLGQR+ VNVYR++   ++E++++ LQ  KL VA AVV+ +NAS  +  TG +L
Sbjct:   13 EEEKANGGEAKPNPASGSGHRVLVFSQLKSLLDLVENELFSNSMRDVSWLRLDGSVAPSQRFEVVRKFNADPSIDVLLLTTHVGGLGLNLTSADTVVFLEHDWNPQKDLQAMDRAHRLGQRRTVNVYRILTRGTLEEKIMSLQRFKLDVANAVVNADNASMSAMDTGQML 182          
BLAST of Ec-27_004530.3 vs. uniprot
Match: A0A7S0VQ36_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0VQ36_9CHLO)

HSP 1 Score: 161 bits (408), Expect = 2.230e-44
Identity = 82/140 (58.57%), Postives = 107/140 (76.43%), Query Frame = 0
Query:  215 KCLVFAQHKAALDVTESALLRPCFPGVKYLRMDGSVSQAERAAAVDRFSADPSVAILLLTTRVGHLGLNLSAASMVVFLEHDWNPQVDLQAMDRAHRLGQRKAVNVYRLIAADSVEQRVLRLQGHKLQVAAAVVSRENAS 354
            + L+FAQ KA LD+ ES++L P   GV YLR+DGSV  A R + V +F+ADP+V +LLLTT VG +GLNL+AA  V+FLEHDWNP  DLQAMDRAHRLGQRK V VYR++   ++E+R++ LQ  KL VAA V++ +N+S
Sbjct:   18 RILIFAQLKAMLDLVESSVLNPY--GVSYLRLDGSVDAASRFSVVQKFNADPTVDVLLLTTSVGGVGLNLTAADTVIFLEHDWNPMKDLQAMDRAHRLGQRKTVQVYRILTQGTLEERIMGLQQFKLNVAATVINADNSS 155          
BLAST of Ec-27_004530.3 vs. uniprot
Match: A0A0L0FJM7_9EUKA (Helicase C-terminal domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FJM7_9EUKA)

HSP 1 Score: 170 bits (430), Expect = 2.380e-44
Identity = 90/171 (52.63%), Postives = 116/171 (67.84%), Query Frame = 0
Query:  190 GKGSLPRQEEATTAGDGVASPLPGRKCLVFAQHKAALDVTESALLRPCFPGVKYLRMDGSVSQAERAAAVDRFSADPSVAILLLTTRVGHLGLNLSAASMVVFLEHDWNPQVDLQAMDRAHRLGQRKAVNVYRLIAADSVEQRVLRLQGHKLQVAAAVVSRENASAFSSGT 360
            G G    + E  T GDG  S     + L+F QHKA LD+ E  L +   PG+ YLRMDGSV    R A V +F+ADP++ +LLLTT VG LGLNL+ A  VVF+EHDWNP  DLQAMDRAHR+GQ+K V+VYRLI  +++E++V+ LQ  KL +A +V++ ENAS  S  T
Sbjct:  248 GLGITADETENGTLGDGGVSS--NHRVLIFCQHKAMLDLIEQDLFKALMPGIIYLRMDGSVESVNRFAIVSKFNADPTIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMKDLQAMDRAHRIGQKKVVSVYRLITKNTLEEKVMGLQKFKLNIANSVITSENASMRSMDT 416          
BLAST of Ec-27_004530.3 vs. uniprot
Match: E2BIA8_HARSA (TATA-binding protein-associated factor 172 n=1 Tax=Harpegnathos saltator TaxID=610380 RepID=E2BIA8_HARSA)

HSP 1 Score: 165 bits (418), Expect = 3.980e-44
Identity = 84/146 (57.53%), Postives = 107/146 (73.29%), Query Frame = 0
Query:  215 KCLVFAQHKAALDVTESALLRPCFPGVKYLRMDGSVSQAERAAAVDRFSADPSVAILLLTTRVGHLGLNLSAASMVVFLEHDWNPQVDLQAMDRAHRLGQRKAVNVYRLIAADSVEQRVLRLQGHKLQVAAAVVSRENASAFSSGT 360
            + L+F Q KA LD+ E  LLR   P V YLR+DGS+  A+R + V RF+ADPS+ +LLLTT+VG LGLNL+ A  V+F+EHDWNP  DLQAMDRAHR+GQ+K VNVYRLI   +VE++++ LQ  KL  A  V+S ENAS  + GT
Sbjct:  108 RALIFCQLKAMLDIVEKDLLRMHLPTVTYLRLDGSIPAAQRHSVVARFNADPSIDVLLLTTQVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRSTVEEKIMGLQKFKLLTANTVISTENASLDTMGT 253          
The following BLAST results are available for this feature:
BLAST of Ec-27_004530.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBB5_ECTSI2.420e-13397.62Essential abundant protein involved in regulation ... [more]
A0A6H5J4R7_9PHAE6.200e-10675.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z4M3_9STRA1.080e-5255.50SNF2 family N-terminal domain-containing protein n... [more]
B5YN14_THAPS1.870e-4554.79Predicted protein (Fragment) n=1 Tax=Thalassiosira... [more]
A0A7S2URQ5_9STRA2.440e-4552.90Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7R9Z664_9STRA3.640e-4551.81Hypothetical protein n=2 Tax=Pseudictyota dubia Ta... [more]
A0A7S0Z8Q0_9CHLO6.160e-4551.18Hypothetical protein n=1 Tax=Ostreococcus mediterr... [more]
A0A7S0VQ36_9CHLO2.230e-4458.57Hypothetical protein (Fragment) n=1 Tax=Polytomell... [more]
A0A0L0FJM7_9EUKA2.380e-4452.63Helicase C-terminal domain-containing protein n=1 ... [more]
E2BIA8_HARSA3.980e-4457.53TATA-binding protein-associated factor 172 n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 71..91
NoneNo IPR availableGENE3D3.40.50.300coord: 209..399
e-value: 5.1E-54
score: 185.4
NoneNo IPR availablePANTHERPTHR10799SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATEDcoord: 5..366
NoneNo IPR availablePANTHERPTHR10799:SF814B-TFIID TATA-BOX-BINDING PROTEIN-ASSOCIATED FACTOR 1coord: 5..366
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 227..313
e-value: 3.0E-17
score: 73.3
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 212..313
e-value: 1.5E-14
score: 54.3
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 203..355
score: 14.059
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 212..361

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:3994357..3996837 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_004530.3Ec-27_004530.3Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_27 3992971..4004261 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-27_004530.3 ID=Ec-27_004530.3|Name=Ec-27_004530.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=417bp
MSADVKLSGKLMALRELLWDAGIGKRQTSVSFGGGGGGGGSGESSSGSES
VDIGSSDSDTGTMDDSSSDDNEEEEVVVEEEEERAERAVNDGKRQRSLEQ
RQSSSDSRKRGRNSRGRPEGGGSRAGHTNPNLAKAGPNSSTSSPGKPDTK
RSTVGTAGSSARAARSSSSRAPAESTGKGGKPPPTTTTRGKGSLPRQEEA
TTAGDGVASPLPGRKCLVFAQHKAALDVTESALLRPCFPGVKYLRMDGSV
SQAERAAAVDRFSADPSVAILLLTTRVGHLGLNLSAASMVVFLEHDWNPQ
VDLQAMDRAHRLGQRKAVNVYRLIAADSVEQRVLRLQGHKLQVAAAVVSR
ENASAFSSGTGGVLGMLGEAMAVVAAANKKKDGGGGDDGESVELWSADED
YAYLAAERLADSVARE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase