Ec-00_006890.2 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-00_006890.2
Unique NameEc-00_006890.2
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length183
Homology
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BLAST of Ec-00_006890.2 vs. uniprot
Match: D7G3R9_ECTSI (Helicase_C_4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3R9_ECTSI)

HSP 1 Score: 242 bits (617), Expect = 7.670e-72
Identity = 125/127 (98.43%), Postives = 127/127 (100.00%), Query Frame = 0 
Query:    1 MIRDKQDTDVFVLRGSRLLMAWPHLDKAFSFLYGGPSAETKKKDKTVRSPVVHVKAAAPSDPLEEAFAAAAAETLKEFNASCSEEDCGTALVSQEDAGKSFIALQLPTTRSINEHMANQIFDVLERG 127
            +I+DKQDTDVFVLRGSRLLMAWPHLDKAFSFLYGGPSAETKKKDKTVRSPVVHVKAAAPSDPLEEAFAAAAAETLKEFNASCSEEDCGTALVSQEDAGKSFIALQLPTTRSINEHMANQIFDVLERG
Sbjct:  269 IIKDKQDTDVFVLRGSRLLMAWPHLDKAFSFLYGGPSAETKKKDKTVRSPVVHVKAAAPSDPLEEAFAAAAAETLKEFNASCSEEDCGTALVSQEDAGKSFIALQLPTTRSINEHMANQIFDVLERG 395
The following BLAST results are available for this feature:
BLAST of Ec-00_006890.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G3R9_ECTSI7.670e-7298.43Helicase_C_4 domain-containing protein n=1 Tax=Ect... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:10928050..10932222 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_006890.2Ec-00_006890.2Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_00 10921670..10932550 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-00_006890.2 ID=Ec-00_006890.2|Name=Ec-00_006890.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=183bp
MIRDKQDTDVFVLRGSRLLMAWPHLDKAFSFLYGGPSAETKKKDKTVRSP
VVHVKAAAPSDPLEEAFAAAAAETLKEFNASCSEEDCGTALVSQEDAGKS
FIALQLPTTRSINEHMANQIFDVLERGSELLEGSSLLGVGLVATTVGHAG
VSFGLVRGICVAHPVTPLDGNLLPCHDEGFRN*
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