Ec-00_005880.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-00_005880.1
Unique NameEc-00_005880.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length50
Homology
BLAST of Ec-00_005880.1 vs. uniprot
Match: D7G2E6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2E6_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 5.660e-28
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0
Query:    1 MMWANIWKLLGATMLPMFTAGTGLGMTSTTEDGGVIAVRDGVVVQMSSW 49
            MMWANIWKLLGATMLPMFTAGTGLGMTSTTEDGGVIAVRDGVVVQMSSW
Sbjct:    1 MMWANIWKLLGATMLPMFTAGTGLGMTSTTEDGGVIAVRDGVVVQMSSW 49          
BLAST of Ec-00_005880.1 vs. uniprot
Match: D7FSJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSJ7_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 5.670e-14
Identity = 33/44 (75.00%), Postives = 37/44 (84.09%), Query Frame = 0
Query:    2 MWANIWKLLGATMLPMFTAGTGLGMTSTTEDGGVIAVRDGVVVQ 45
            MWANIW++LG TM+P+FT GTGL M S  ED GVIAVRDGVVVQ
Sbjct:   20 MWANIWQILGVTMIPIFTVGTGLSMASRAEDAGVIAVRDGVVVQ 63          
BLAST of Ec-00_005880.1 vs. uniprot
Match: A0A6H5L7B0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7B0_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 1.940e-8
Identity = 28/44 (63.64%), Postives = 35/44 (79.55%), Query Frame = 0
Query:    2 MWANIWKLLGATMLPMFTAGTGLGMTSTTEDGGVIAVRDGVVVQ 45
            MWA++ +++GATM+ M TAGTGL M S T +GGVI VR GVVVQ
Sbjct:    1 MWASVRRMVGATMVSMLTAGTGLHMESVTANGGVIDVRHGVVVQ 44          
The following BLAST results are available for this feature:
BLAST of Ec-00_005880.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G2E6_ECTSI5.660e-28100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FSJ7_ECTSI5.670e-1475.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7B0_9PHAE1.940e-863.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..49
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.679

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:9377728..9378491 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_005880.1Ec-00_005880.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_00 9377728..9378491 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-00_005880.1 ID=Ec-00_005880.1|Name=Ec-00_005880.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=50bp
MMWANIWKLLGATMLPMFTAGTGLGMTSTTEDGGVIAVRDGVVVQMSSW*
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