Ec-00_005780.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-00_005780.1
Unique NameEc-00_005780.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length252
Homology
BLAST of Ec-00_005780.1 vs. uniprot
Match: A0A6H5JI65_9PHAE (RRF domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JI65_9PHAE)

HSP 1 Score: 440 bits (1132), Expect = 3.070e-155
Identity = 243/251 (96.81%), Postives = 245/251 (97.61%), Query Frame = 0
Query:    1 MRASVFTAAASAAAVALCSGVSGFVFAPPLAAKRAGVPTTGKASPCASTAPRQRWTSSLKMAADEFDGDAVMASAQERMDKSVESVRLNLETLRTGRANPKILDRVVVECYGAETPLNQVASVKTTSATALLVESYDPTILADIAAAIQEADLGLTPNNDGTVIRLNMPPVTEDRRKELAKEAKGLGEEGKVAIRNIRREAVDTVKKAEKAKNLGKDQSKDAQDAIQKLTDKTTKTIDEKVAAKEKDILKV 251
            MRASVFTAAASAAAVALCSGVSGFVFAPPL AKRAG PTTGKAS CASTAPR RW+SSLKMAADEFDGDAV+ASAQERMDKSVESVRLNLETLRTGRANPKILDRVVVECYGAETPLNQVASVKTTSATALLVESYDPTILADIAAAIQEADLGLTPNNDGTVIRLNMPPVTEDRRKELAKEAK LGEEGKVAIRNIRREAVDTVKKAEKAKNLGKDQSKD QDAIQKLTDKTTKTIDEKVAAKEKDILKV
Sbjct:    1 MRASVFTAAASAAAVALCSGVSGFVFAPPLPAKRAGAPTTGKASACASTAPRLRWSSSLKMAADEFDGDAVLASAQERMDKSVESVRLNLETLRTGRANPKILDRVVVECYGAETPLNQVASVKTTSATALLVESYDPTILADIAAAIQEADLGLTPNNDGTVIRLNMPPVTEDRRKELAKEAKSLGEEGKVAIRNIRREAVDTVKKAEKAKNLGKDQSKDVQDAIQKLTDKTTKTIDEKVAAKEKDILKV 251          
BLAST of Ec-00_005780.1 vs. uniprot
Match: B7GAC1_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GAC1_PHATC)

HSP 1 Score: 206 bits (525), Expect = 2.320e-63
Identity = 107/181 (59.12%), Postives = 142/181 (78.45%), Query Frame = 0
Query:   71 VMASAQERMDKSVESVRLNLETLRTGRANPKILDRVVVECYGAETPLNQVASVKTTSATALLVESYDPTILADIAAAIQEADLGLTPNNDGTVIRLNMPPVTEDRRKELAKEAKGLGEEGKVAIRNIRREAVDTVKKAEKAKNLGKDQSKDAQDAIQKLTDKTTKTIDEKVAAKEKDILKV 251
            V   A +RM KSV+SVRLNL+++RTGRA+ +ILDRV V+ YG ETPLNQ+A++   SA  L ++ YD T L +I  AI E+DLGLT NNDG++IR+N+P +TEDRRKE+ K  K +GEEGKVA+RNIRR+ +DT+KK EK+ ++G+D+ KD QD +QKLTDK  K IDE V AKEK+++KV
Sbjct:   45 VTDDASDRMAKSVDSVRLNLQSVRTGRASAQILDRVKVDYYGVETPLNQMATISVPSAQQLSIDPYDKTSLNNIETAIVESDLGLTTNNDGSIIRINIPSMTEDRRKEMLKLCKSIGEEGKVAVRNIRRDGLDTIKKMEKSSDIGEDEMKDGQDTMQKLTDKNVKEIDEVVGAKEKEVMKV 225          
BLAST of Ec-00_005780.1 vs. uniprot
Match: A0A7S2S100_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S100_9STRA)

HSP 1 Score: 204 bits (518), Expect = 4.240e-62
Identity = 110/185 (59.46%), Postives = 141/185 (76.22%), Query Frame = 0
Query:   69 DAVMASAQERMDKSVESVRLNLETLRTGRANPKILDRVVVECYGAETPLNQVASVKTTSATALLVESYDPTILADIAAAIQEADLGLTPNNDGTVIRLNMPPVTEDRRKELAKEAKGLGEEGKVAIRNIRREAVDTVKKAEKAKNLG--KDQSKDAQDAIQKLTDKTTKTIDEKVAAKEKDILKV 251
            D V + A+ +M KSVESV+ NL TLRTGRANP +LDRV V+ YG  TPLNQVAS+  +S T+L+V+ YD + L D+  AI E+D+G+ P+NDG  IRLN+P +TE+RRKEL K AK LGE+GKVA+RN+RR+AVD++KK  K K+ G  +D  KD+ D+IQKLTDK  K +DE VA KEKDI KV
Sbjct:   56 DEVESEAEVKMKKSVESVQTNLNTLRTGRANPSLLDRVQVDYYGTPTPLNQVASISVSSGTSLIVDPYDKSSLGDVEKAIMESDIGIVPSNDGEKIRLNIPSLTEERRKELMKTAKSLGEDGKVALRNVRRDAVDSIKKLAKDKDAGVSEDSVKDSTDSIQKLTDKYVKEVDEVVAGKEKDISKV 240          
BLAST of Ec-00_005780.1 vs. uniprot
Match: A0A7S2JZ54_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JZ54_9STRA)

HSP 1 Score: 203 bits (516), Expect = 6.030e-62
Identity = 105/183 (57.38%), Postives = 139/183 (75.96%), Query Frame = 0
Query:   69 DAVMASAQERMDKSVESVRLNLETLRTGRANPKILDRVVVECYGAETPLNQVASVKTTSATALLVESYDPTILADIAAAIQEADLGLTPNNDGTVIRLNMPPVTEDRRKELAKEAKGLGEEGKVAIRNIRREAVDTVKKAEKAKNLGKDQSKDAQDAIQKLTDKTTKTIDEKVAAKEKDILKV 251
            D +    +ERM KS +SV  NL+T+ TGRANP +LDR+  + YGA TP+NQ+AS+   SA+ L ++ YD + L+DI  AI  +DLG+TP NDG+VIR+N+P +TE+RRKEL K+ KG+GEEGKVA+RN+RR+ VD +KK EKA  +G+DQSK+ QD IQK+TDK  K IDE VA KEKD+ KV
Sbjct:   47 DEIALEIEERMQKSCDSVVRNLQTISTGRANPAMLDRIQADYYGAPTPINQMASISVPSASQLQIDPYDKSSLSDIEKAIIISDLGMTPQNDGSVIRINIPALTEERRKELLKKCKGIGEEGKVAVRNVRRDGVDKIKKLEKASTIGEDQSKEGQDDIQKMTDKYVKDIDEIVAKKEKDVSKV 229          
BLAST of Ec-00_005780.1 vs. uniprot
Match: A0A6U3R470_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3R470_9STRA)

HSP 1 Score: 202 bits (513), Expect = 1.770e-61
Identity = 111/193 (57.51%), Postives = 143/193 (74.09%), Query Frame = 0
Query:   59 LKMAADEFDGDAVMASAQERMDKSVESVRLNLETLRTGRANPKILDRVVVECYGAETPLNQVASVKTTSATALLVESYDPTILADIAAAIQEADLGLTPNNDGTVIRLNMPPVTEDRRKELAKEAKGLGEEGKVAIRNIRREAVDTVKKAEKAKNLGKDQSKDAQDAIQKLTDKTTKTIDEKVAAKEKDILKV 251
            LKMA +E D   V    +ERM KS+ES++ NL T+RTGRAN  ILDRV  + YGAETP+NQ+A +  T++  L ++ YD + L+ I  AI E+DLG++P NDG+VIR+N+PP+TEDRRKEL K  K  GEEGKVA+RN+RR+ VDT+KK EK   +GKD+S D  D +QKLTDK  K ID+ VAAKEKDI+ V
Sbjct:   41 LKMA-EEID--MVTMDGEERMAKSIESLKRNLSTIRTGRANAAILDRVKADYYGAETPINQMAGISVTNSQQLTIDPYDKSSLSAIEKAIIESDLGISPQNDGSVIRINIPPLTEDRRKELLKVCKSTGEEGKVAVRNVRRDCVDTIKKMEKNSEVGKDESLDGLDEMQKLTDKHVKEIDDIVAAKEKDIMTV 230          
BLAST of Ec-00_005780.1 vs. uniprot
Match: A0A7S2YL39_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YL39_9STRA)

HSP 1 Score: 202 bits (513), Expect = 1.940e-61
Identity = 109/195 (55.90%), Postives = 144/195 (73.85%), Query Frame = 0
Query:   57 SSLKMAADEFDGDAVMASAQERMDKSVESVRLNLETLRTGRANPKILDRVVVECYGAETPLNQVASVKTTSATALLVESYDPTILADIAAAIQEADLGLTPNNDGTVIRLNMPPVTEDRRKELAKEAKGLGEEGKVAIRNIRREAVDTVKKAEKAKNLGKDQSKDAQDAIQKLTDKTTKTIDEKVAAKEKDILKV 251
            S L M+ DE   D V   A+ERM KS++SV+ NL T+RTGRA+  +LDRV V+ YGAETPLNQ+A++   SA  L V+ YD +I  DI  AI E+DLGL  NNDGT++R+N+P +TEDRRKE+ K+ K LGE+GKVA+RN+RR  V+T+KK EK  ++G+D+SK  QD IQKLTD   K ID+ VA KEK+++ V
Sbjct:   39 SRLFMSTDEKTVDDVTLDAEERMSKSIDSVKQNLMTIRTGRASANMLDRVKVDYYGAETPLNQLATIGVPSAQQLTVDPYDKSITNDIEKAIAESDLGLMANNDGTMLRINIPALTEDRRKEMLKQCKALGEDGKVAVRNVRRACVETIKKMEKGGSIGEDESKGGQDDIQKLTDTNVKLIDDIVAKKEKEVMTV 233          
BLAST of Ec-00_005780.1 vs. uniprot
Match: A0A7S2CMX2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CMX2_9STRA)

HSP 1 Score: 201 bits (512), Expect = 2.750e-61
Identity = 103/186 (55.38%), Postives = 139/186 (74.73%), Query Frame = 0
Query:   66 FDGDAVMASAQERMDKSVESVRLNLETLRTGRANPKILDRVVVECYGAETPLNQVASVKTTSATALLVESYDPTILADIAAAIQEADLGLTPNNDGTVIRLNMPPVTEDRRKELAKEAKGLGEEGKVAIRNIRREAVDTVKKAEKAKNLGKDQSKDAQDAIQKLTDKTTKTIDEKVAAKEKDILKV 251
             D D + + A+ +M KS++SV+ NL+TLR GRA+  +LDRVVV+ YGAETPLNQ+A +  T   AL ++ YD + L DI  A+ E+DLG+TPNN+G  IRLN+P +TEDRRKEL+K AK LGE+GK A+RN+RR+AVD VKK  KA ++ +DQ KD +DA+QK+TDK  K I+  +  KE DI+KV
Sbjct:   48 MDVDKITSDAETKMKKSLDSVQSNLDTLRAGRASANLLDRVVVDYYGAETPLNQLAGISVTGGQALTIDPYDKSTLGDIERALMESDLGMTPNNNGETIRLNIPALTEDRRKELSKTAKSLGEDGKTALRNVRRDAVDKVKKLAKAGDISEDQGKDGEDAVQKMTDKYVKEIETVIKKKEADIMKV 233          
BLAST of Ec-00_005780.1 vs. uniprot
Match: A0A7S1TJD3_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TJD3_9RHOD)

HSP 1 Score: 200 bits (508), Expect = 6.280e-61
Identity = 106/199 (53.27%), Postives = 145/199 (72.86%), Query Frame = 0
Query:   53 QRWTSSLKMAADEFDGDAVMASAQERMDKSVESVRLNLETLRTGRANPKILDRVVVECYGAETPLNQVASVKTTSATALLVESYDPTILADIAAAIQEADLGLTPNNDGTVIRLNMPPVTEDRRKELAKEAKGLGEEGKVAIRNIRREAVDTVKKAEKAKNLGKDQSKDAQDAIQKLTDKTTKTIDEKVAAKEKDILKV 251
            +RW  S+K          +   ++ERM KS+E+V  +  T+RTGRANP ILDRV+V  YGAETPL Q+ASV T S+T + ++++D + + DI  AI E+DLGLTP+NDG VIRLN+P +T+DRRKE+ K+ K L EEG+VA+RNIRR+ VD +K  EK+ ++GKD+SK AQD IQKLTDK  KT+D  +  KE +++KV
Sbjct:   26 KRWRMSVK---------DIAKGSEERMKKSIEAVGTSFNTIRTGRANPAILDRVMVSYYGAETPLKQLASVSTPSSTVIAIDAFDKSCIKDIERAIMESDLGLTPSNDGNVIRLNIPALTQDRRKEMVKQLKQLAEEGRVALRNIRRDGVDQIKALEKSSDIGKDESKIAQDEIQKLTDKYVKTVDSLLKDKEGEVMKV 215          
BLAST of Ec-00_005780.1 vs. uniprot
Match: A0A7S4EEJ6_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EEJ6_9STRA)

HSP 1 Score: 200 bits (509), Expect = 6.670e-61
Identity = 103/177 (58.19%), Postives = 137/177 (77.40%), Query Frame = 0
Query:   75 AQERMDKSVESVRLNLETLRTGRANPKILDRVVVECYGAETPLNQVASVKTTSATALLVESYDPTILADIAAAIQEADLGLTPNNDGTVIRLNMPPVTEDRRKELAKEAKGLGEEGKVAIRNIRREAVDTVKKAEKAKNLGKDQSKDAQDAIQKLTDKTTKTIDEKVAAKEKDILKV 251
            A +RM+KS+ESV  N+ T+RTGRA+P ILDRV  + YG ETP+NQ+AS+   SA  L VE +D ++L D+  AI E+D+GLTP NDGTVIRLN+P +TEDRRKE+ K+ K +GEEGKVA+RNIRR+AVD++KK EK  ++ +D+SK +QD IQK+TD+  K ID  V  KE D++KV
Sbjct:   52 AMDRMEKSIESVMQNMNTIRTGRASPAILDRVKCDYYGTETPINQMASISVPSAQQLTVEPFDKSMLGDVERAIMESDVGLTPMNDGTVIRLNIPSLTEDRRKEMMKQCKAIGEEGKVAVRNIRRKAVDSIKKLEKDSDISEDESKSSQDDIQKMTDEKVKEIDGIVEKKENDVMKV 228          
BLAST of Ec-00_005780.1 vs. uniprot
Match: A0A836CN93_9STRA (Ribosome recycling factor domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN93_9STRA)

HSP 1 Score: 198 bits (503), Expect = 9.350e-61
Identity = 108/173 (62.43%), Postives = 132/173 (76.30%), Query Frame = 0
Query:   79 MDKSVESVRLNLETLRTGRANPKILDRVVVECYGAETPLNQVASVKTTSATALLVESYDPTILADIAAAIQEADLGLTPNNDGTVIRLNMPPVTEDRRKELAKEAKGLGEEGKVAIRNIRREAVDTVKKAEKAKNLGKDQSKDAQDAIQKLTDKTTKTIDEKVAAKEKDILKV 251
            M KSV+  R NL TLRTGRA+P ILDRV V+ YG  TPL  +A+VKT+SAT L+VE YD + L+ I   I E+ +GL PNNDG VIRLN+P VTEDRRKEL KEA+ LGEEGKVA+RNIRR+ V+ +KKAEK+K + +DQSK+    IQK+TDK  K +DE VA KEKDI+ V
Sbjct:    1 MQKSVDKCRENLATLRTGRASPGILDRVFVDYYGTPTPLKGLAAVKTSSATQLMVEPYDRSSLSAIERGILESGVGLNPNNDGQVIRLNIPAVTEDRRKELCKEARALGEEGKVAVRNIRRDVVEVIKKAEKSKEISQDQSKNTSGDIQKITDKYAKMVDEAVATKEKDIMTV 173          
The following BLAST results are available for this feature:
BLAST of Ec-00_005780.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JI65_9PHAE3.070e-15596.81RRF domain-containing protein n=2 Tax=Ectocarpus T... [more]
B7GAC1_PHATC2.320e-6359.12Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]
A0A7S2S100_9STRA4.240e-6259.46Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2JZ54_9STRA6.030e-6257.38Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A6U3R470_9STRA1.770e-6157.51Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2YL39_9STRA1.940e-6155.90Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S2CMX2_9STRA2.750e-6155.38Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S1TJD3_9RHOD6.280e-6153.27Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A7S4EEJ6_9STRA6.670e-6158.19Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A836CN93_9STRA9.350e-6162.43Ribosome recycling factor domain-containing protei... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 194..214
NoneNo IPR availableGENE3D1.10.132.20coord: 78..248
e-value: 4.8E-60
score: 203.9
NoneNo IPR availableGENE3D3.30.1360.40coord: 97..171
e-value: 4.8E-60
score: 203.9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..251
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
IPR002661Ribosome recycling factorTIGRFAMTIGR00496TIGR00496coord: 76..251
e-value: 7.0E-64
score: 212.6
IPR002661Ribosome recycling factorPANTHERPTHR20982RIBOSOME RECYCLING FACTORcoord: 68..250
IPR002661Ribosome recycling factorHAMAPMF_00040RRFcoord: 69..251
score: 24.791
IPR023584Ribosome recycling factor domainPFAMPF01765RRFcoord: 89..249
e-value: 2.6E-56
score: 190.0
IPR036191RRF superfamilySUPERFAMILY55194Ribosome recycling factor, RRFcoord: 71..250

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:9272177..9278215 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_005780.1Ec-00_005780.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_00 9271385..9278241 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-00_005780.1 ID=Ec-00_005780.1|Name=Ec-00_005780.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=252bp
MRASVFTAAASAAAVALCSGVSGFVFAPPLAAKRAGVPTTGKASPCASTA
PRQRWTSSLKMAADEFDGDAVMASAQERMDKSVESVRLNLETLRTGRANP
KILDRVVVECYGAETPLNQVASVKTTSATALLVESYDPTILADIAAAIQE
ADLGLTPNNDGTVIRLNMPPVTEDRRKELAKEAKGLGEEGKVAIRNIRRE
AVDTVKKAEKAKNLGKDQSKDAQDAIQKLTDKTTKTIDEKVAAKEKDILK
V*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002661Ribosome_recyc_fac
IPR023584Ribosome_recyc_fac_dom
IPR036191RRF_sf