Ec-00_005770.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ec-00_005770.1
Unique Name	Ec-00_005770.1
Type	polypeptide
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	420

Homology

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BLAST of Ec-00_005770.1 vs. uniprot
Match: D7G2D7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2D7_ECTSI)

HSP 1 Score: 746 bits (1927), Expect = 1.720e-271
Identity = 374/374 (100.00%), Postives = 374/374 (100.00%), Query Frame = 0

Query:   46 MQDDTHVIVLENIACKLPRAVIVSGPYAFLVSSELASLTFENLRFSIKDGADFFLNLSSDEYQGTVAFVGTSPQQSHGGTFKIELGASLTFGAPVIFMGSSVVAGKRGGAIYNNGYLTFEHSAKFANCSVVSEDGEAPTTPTLKPGISLDDASGLPGTAAAFADAAVSTNVEPAHPVPHWGCGGALYNGESAQASFQDVTWFNDNIAGVGSAGGAVCNEGVASFSSRTYFTGNTVPEHSLYGRGEGGALFTAAGAVTTLVRKANFRNNRSGGEGGAIYSAGITTLQGSGVFYGNMAWGWASGRGGHVFSSGVFEVKRDTSFRSGRASHDGGALFVSDIGEACFDGELGFHGNEAARQCHDVYDASSKTVCLSVG 419
            MQDDTHVIVLENIACKLPRAVIVSGPYAFLVSSELASLTFENLRFSIKDGADFFLNLSSDEYQGTVAFVGTSPQQSHGGTFKIELGASLTFGAPVIFMGSSVVAGKRGGAIYNNGYLTFEHSAKFANCSVVSEDGEAPTTPTLKPGISLDDASGLPGTAAAFADAAVSTNVEPAHPVPHWGCGGALYNGESAQASFQDVTWFNDNIAGVGSAGGAVCNEGVASFSSRTYFTGNTVPEHSLYGRGEGGALFTAAGAVTTLVRKANFRNNRSGGEGGAIYSAGITTLQGSGVFYGNMAWGWASGRGGHVFSSGVFEVKRDTSFRSGRASHDGGALFVSDIGEACFDGELGFHGNEAARQCHDVYDASSKTVCLSVG
Sbjct:    1 MQDDTHVIVLENIACKLPRAVIVSGPYAFLVSSELASLTFENLRFSIKDGADFFLNLSSDEYQGTVAFVGTSPQQSHGGTFKIELGASLTFGAPVIFMGSSVVAGKRGGAIYNNGYLTFEHSAKFANCSVVSEDGEAPTTPTLKPGISLDDASGLPGTAAAFADAAVSTNVEPAHPVPHWGCGGALYNGESAQASFQDVTWFNDNIAGVGSAGGAVCNEGVASFSSRTYFTGNTVPEHSLYGRGEGGALFTAAGAVTTLVRKANFRNNRSGGEGGAIYSAGITTLQGSGVFYGNMAWGWASGRGGHVFSSGVFEVKRDTSFRSGRASHDGGALFVSDIGEACFDGELGFHGNEAARQCHDVYDASSKTVCLSVG 374

[Close]

BLAST of Ec-00_005770.1 vs. uniprot
Match: A0A6H5LLM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLM6_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 4.880e-27
Identity = 56/57 (98.25%), Postives = 56/57 (98.25%), Query Frame = 0

Query:   63 PRAVIVSGPYAFLVSSELASLTFENLRFSIKDGADFFLNLSSDEYQGTVAFVGTSPQ 119
            PR VIVSGPYAFLVSSELASLTFENLRFSIKDGADFFLNLSSDEYQGTVAFVGTSPQ
Sbjct:   23 PRGVIVSGPYAFLVSSELASLTFENLRFSIKDGADFFLNLSSDEYQGTVAFVGTSPQ 79

The following BLAST results are available for this feature:

BLAST of Ec-00_005770.1 vs. uniprot

BLAST of Ec-00_005770.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G2D7_ECTSI	1.720e-271	100.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5LLM6_9PHAE	4.880e-27	98.25	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003368	Polymorphic outer membrane protein repeat	TIGRFAM	TIGR01376	TIGR01376	coord: 308..330 e-value: 7.3E-5 score: 20.4
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..28
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..7
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 29..419
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 20..28
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 8..19
None	No IPR available	SIGNALP_EUK	SignalP-TM	SignalP-TM	coord: 1..28 score: 0.596
None	No IPR available	TMHMM	TMhelix		coord: 12..34

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:9260393..9269981 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_005770.1	Ec-00_005770.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	mRNA	chr_00 9257839..9270762 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ec-00_005770.1 ID=Ec-00_005770.1|Name=Ec-00_005770.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=420bp
MVMVGRRLSSIFLCCCCALSLWSHGVFGISYYVSSCKDFLSLPTPMQDDT
HVIVLENIACKLPRAVIVSGPYAFLVSSELASLTFENLRFSIKDGADFFL
NLSSDEYQGTVAFVGTSPQQSHGGTFKIELGASLTFGAPVIFMGSSVVAG
KRGGAIYNNGYLTFEHSAKFANCSVVSEDGEAPTTPTLKPGISLDDASGL
PGTAAAFADAAVSTNVEPAHPVPHWGCGGALYNGESAQASFQDVTWFNDN
IAGVGSAGGAVCNEGVASFSSRTYFTGNTVPEHSLYGRGEGGALFTAAGA
VTTLVRKANFRNNRSGGEGGAIYSAGITTLQGSGVFYGNMAWGWASGRGG
HVFSSGVFEVKRDTSFRSGRASHDGGALFVSDIGEACFDGELGFHGNEAA
RQCHDVYDASSKTVCLSVG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003368	POMP_repeat