Ec-00_005550.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-00_005550.1
Unique NameEc-00_005550.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length353
Homology
BLAST of Ec-00_005550.1 vs. uniprot
Match: A0A6H5JGF1_9PHAE (HMG box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGF1_9PHAE)

HSP 1 Score: 317 bits (811), Expect = 1.980e-103
Identity = 280/353 (79.32%), Postives = 284/353 (80.45%), Query Frame = 0
Query:    1 MWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAEDKARYARELAEYKAWLLLKQDSTENKGEVPTQADKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAELSVPSTITXXXXXXXXXXXXXPPMTEANVATS-ERGTATTPVAPGAALPALPPPXXXXASLPTSFPEHPSHDGGMGVAMMHQQAKRQRRGESGAGGGDCSIPGAGAVPGVMAGVAAGAAVEGIVAMTPMDQESLAARSRSHVPHLIQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLCDTTRVEGPMVVSQPSLHYSV 352
            MWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAEDKARYARELAEYKAWLLLKQ STENKGEVPTQADKAA                 XXXXXXXXXXXXXXXXXXXX            XXXXXXXXXXXXX   T    ++  ERG ATTPVAPGAALPALPP XXXXASLPTSFPEHP HDGG G+AMMHQQAKRQRR ES A G D SI GAGAVPGVM GVAAGAAVE IVAM  MDQE+LAAR RSHVPHL QQQXXXXXXXXXX    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          QLCDTTRVEGPMVVSQPSLHYSV
Sbjct:    1 MWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAEDKARYARELAEYKAWLLLKQGSTENKGEVPTQADKAAVITAAAPTSRHASVALPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVATSVLPSSECERGKATTPVAPGAALPALPPXXXXXASLPTSFPEHPLHDGGTGMAMMHQQAKRQRREESAAAG-DGSISGAGAVPGVMVGVAAGAAVESIVAMPTMDQEALAARGRSHVPHLTQQQXXXXXXXXXXIMQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------QLCDTTRVEGPMVVSQPSLHYSV 342          
BLAST of Ec-00_005550.1 vs. uniprot
Match: D7G1C1_ECTSI (HMG box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1C1_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 1.640e-23
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0
Query:    1 MWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAE 48
            MWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAE
Sbjct:    1 MWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAE 48          
BLAST of Ec-00_005550.1 vs. uniprot
Match: A0A8J2T2D7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T2D7_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 1.310e-16
Identity = 38/78 (48.72%), Postives = 58/78 (74.36%), Query Frame = 0
Query:    1 MWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAEDKARYARELAEYKAWLLLKQDSTENKGEVP 78
            M+FS+HHR +L+ +N  ++F D+GK VG +WK+AT  +K+PF+DL+A D+ARYAREL EYK   L +Q++  +  + P
Sbjct:   99 MYFSKHHRTLLKRENASLTFGDLGKTVGAMWKAATPGEKKPFEDLAARDRARYARELEEYKKERLAEQEAEVDSDDEP 176          
BLAST of Ec-00_005550.1 vs. uniprot
Match: F0YAN0_AURAN (HMG box domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAN0_AURAN)

HSP 1 Score: 78.6 bits (192), Expect = 1.010e-14
Identity = 31/60 (51.67%), Postives = 49/60 (81.67%), Query Frame = 0
Query:    1 MWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAEDKARYARELAEY 60
            M+FS+HHR +L+ +N +++F D+GK VG +WK+AT ++K+PF+DL+A D+ RY  EL+EY
Sbjct:   24 MYFSKHHRLLLKRENSDLTFGDLGKTVGAMWKAATPQEKKPFEDLAAADRTRYNSELSEY 83          
BLAST of Ec-00_005550.1 vs. uniprot
Match: A0A7S3JW32_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JW32_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 8.520e-14
Identity = 34/62 (54.84%), Postives = 50/62 (80.65%), Query Frame = 0
Query:    1 MWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAEDKARYARELAEYKA 62
            M+FS+HHR +L+ +N  ++F D+GK VG +WK+AT E+KRPF++L+AEDK RY  EL +YK+
Sbjct:  109 MYFSKHHRMLLKQENSYLTFGDLGKTVGAMWKAATPEEKRPFEELAAEDKNRYVNELHDYKS 170          
BLAST of Ec-00_005550.1 vs. uniprot
Match: F4RQM9_MELLP (HMG box domain-containing protein (Fragment) n=1 Tax=Melampsora larici-populina (strain 98AG31 / pathotype 3-4-7) TaxID=747676 RepID=F4RQM9_MELLP)

HSP 1 Score: 60.8 bits (146), Expect = 2.360e-8
Identity = 26/60 (43.33%), Postives = 44/60 (73.33%), Query Frame = 0
Query:    1 MWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAEDKARYARELAEY 60
            M+FS+  R  ++T+N E+SF +IG+ +G+ WKS  +E+K+P++D++  DK R+  E AEY
Sbjct:   21 MFFSQDWRERIKTENPEVSFGEIGRLLGLKWKSLGEEEKKPYEDMACRDKKRHETEKAEY 80          
BLAST of Ec-00_005550.1 vs. uniprot
Match: A0A0S1MK77_PHAPC (HMG box domain-containing protein n=1 Tax=Phakopsora pachyrhizi TaxID=170000 RepID=A0A0S1MK77_PHAPC)

HSP 1 Score: 60.8 bits (146), Expect = 4.110e-8
Identity = 26/60 (43.33%), Postives = 43/60 (71.67%), Query Frame = 0
Query:    1 MWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAEDKARYARELAEY 60
            M+FS+  R  ++ +N E+SF +IG+ +G  WKS +DE+K+P++D++  DK R+  E AEY
Sbjct:   42 MYFSQDWRERIKAENPEVSFGEIGRLLGQKWKSLSDEEKKPYEDMAGRDKKRHEAEKAEY 101          
BLAST of Ec-00_005550.1 vs. uniprot
Match: A0A2T9Z5D4_9FUNG (HMG box domain-containing protein n=2 Tax=Harpellales TaxID=61421 RepID=A0A2T9Z5D4_9FUNG)

HSP 1 Score: 59.3 bits (142), Expect = 1.070e-7
Identity = 27/62 (43.55%), Postives = 43/62 (69.35%), Query Frame = 0
Query:    1 MWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAEDKARYARELAEYKA 62
            M+FS+ +R  ++ +N   +F ++GK +G +WKS TDEQK+PF+  + +DK RY  E A Y+A
Sbjct:   28 MFFSQEYRGKVKKENPAATFGELGKILGEMWKSMTDEQKKPFNLKAEKDKKRYETEKANYQA 89          
BLAST of Ec-00_005550.1 vs. uniprot
Match: A0A5C5G4Q3_9BASI (High mobility group box domain-containing protein n=1 Tax=Rhodotorula diobovata TaxID=5288 RepID=A0A5C5G4Q3_9BASI)

HSP 1 Score: 58.9 bits (141), Expect = 2.340e-7
Identity = 26/65 (40.00%), Postives = 44/65 (67.69%), Query Frame = 0
Query:    1 MWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAEDKARYARELAEYKAWLL 65
            M FS+  R++++ +N +++F +IGK +GV WK AT+  K+P+++ +  DK RY +E A Y   LL
Sbjct:   33 MHFSQDMRSVVKEENPDVTFGEIGKLLGVKWKEATENDKKPYEEKAKADKERYEKEKAAYDVRLL 97          
BLAST of Ec-00_005550.1 vs. uniprot
Match: A0A2T9YT52_9FUNG (HMG box domain-containing protein n=1 Tax=Smittium simulii TaxID=133385 RepID=A0A2T9YT52_9FUNG)

HSP 1 Score: 57.0 bits (136), Expect = 6.900e-7
Identity = 26/64 (40.62%), Postives = 43/64 (67.19%), Query Frame = 0
Query:    1 MWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAEDKARYARELAEYKAWL 64
            M+FS+ +R  ++ +N + +F  +GK +G +WK+ TDEQK+P+   + +DK RY  E A Y+A L
Sbjct:   27 MFFSQEYREKVKKENPDATFGQLGKILGEMWKTMTDEQKKPYALKAEKDKQRYETEKANYQATL 90          
The following BLAST results are available for this feature:
BLAST of Ec-00_005550.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JGF1_9PHAE1.980e-10379.32HMG box domain-containing protein n=1 Tax=Ectocarp... [more]
D7G1C1_ECTSI1.640e-23100.00HMG box domain-containing protein n=1 Tax=Ectocarp... [more]
A0A8J2T2D7_9STRA1.310e-1648.72Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0YAN0_AURAN1.010e-1451.67HMG box domain-containing protein (Fragment) n=1 T... [more]
A0A7S3JW32_9STRA8.520e-1454.84Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
F4RQM9_MELLP2.360e-843.33HMG box domain-containing protein (Fragment) n=1 T... [more]
A0A0S1MK77_PHAPC4.110e-843.33HMG box domain-containing protein n=1 Tax=Phakopso... [more]
A0A2T9Z5D4_9FUNG1.070e-743.55HMG box domain-containing protein n=2 Tax=Harpella... [more]
A0A5C5G4Q3_9BASI2.340e-740.00High mobility group box domain-containing protein ... [more]
A0A2T9YT52_9FUNG6.900e-740.63HMG box domain-containing protein n=1 Tax=Smittium... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 304..324
NoneNo IPR availablePANTHERPTHR46040FAMILY NOT NAMEDcoord: 2..325
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 1..62
e-value: 1.3E-10
score: 51.3
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 1..61
e-value: 3.0E-13
score: 50.0
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 1..61
score: 13.941
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10coord: 1..63
e-value: 3.3E-15
score: 58.2
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 1..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:8849812..8851762 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_005550.1Ec-00_005550.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_00 8849756..8852255 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-00_005550.1 ID=Ec-00_005550.1|Name=Ec-00_005550.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=353bp
MWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAEDK
ARYARELAEYKAWLLLKQDSTENKGEVPTQADKAAAATTAAAPTSRHASV
APPAPAIAAAAAAATTTTTTTTPAAELSVPSTITTAATPVAPAPTPAPPM
TEANVATSERGTATTPVAPGAALPALPPPPLPPASLPTSFPEHPSHDGGM
GVAMMHQQAKRQRRGESGAGGGDCSIPGAGAVPGVMAGVAAGAAVEGIVA
MTPMDQESLAARSRSHVPHLIQQQQQQQQQQQYQQTQHSIMQHQRGQQQH
QHQHHQYQQQQQQQQQQQQQQQQQHQHQHQLCDTTRVEGPMVVSQPSLHY
SV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009071HMG_box_dom
IPR036910HMG_box_dom_sf