Ec-00_004790.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-00_004790.1
Unique NameEc-00_004790.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length118
Homology
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BLAST of Ec-00_004790.1 vs. uniprot
Match: D7G856_ECTSI (4a-hydroxytetrahydrobiopterin dehydratase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G856_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 2.340e-21
Identity = 49/65 (75.38%), Postives = 50/65 (76.92%), Query Frame = 0 
Query:    4 QPPALSRGGGPRHTRYCAPCLAPISAQRGRDSGAVCVRRWRRNRLRYTKNRSNRLLGGLLLCAAA 68
            QPPALSRGG PR T  CAPCLAP+SAQRGRD GA CVR WRRNR R TKN      GGLLLCAAA
Sbjct:    3 QPPALSRGGRPRQTTCCAPCLAPVSAQRGRDGGAECVRGWRRNRQRDTKN-----FGGLLLCAAA 62
The following BLAST results are available for this feature:
BLAST of Ec-00_004790.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G856_ECTSI2.340e-2175.384a-hydroxytetrahydrobiopterin dehydratase n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 79..117
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..57
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..78
NoneNo IPR availableTMHMMTMhelixcoord: 58..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:6561761..6564102 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_004790.1Ec-00_004790.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_00 6561761..6564102 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-00_004790.1 ID=Ec-00_004790.1|Name=Ec-00_004790.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=118bp
MASQPPALSRGGGPRHTRYCAPCLAPISAQRGRDSGAVCVRRWRRNRLRY
TKNRSNRLLGGLLLCAAAVCSCCSLSVIETSRLPNNPVLFPFASRKTEAQ
KTLSAASRAQRRRGHGT*
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