Ec-28_002060.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-28_002060.1
Unique NameEc-28_002060.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length580
Homology
[Close]
BLAST of Ec-28_002060.1 vs. uniprot
Match: D7FXK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXK6_ECTSI)

HSP 1 Score: 1193 bits (3087), Expect = 0.000e+0
Identity = 579/579 (100.00%), Postives = 579/579 (100.00%), Query Frame = 1 
Query:    1 MFRFDVSTFFTHIALRVFSRHREHAPHAHTPLSPPSFGRPLYFLLSDDRQGEGLRNGQQGARNPERMKKEKKVEAKASTDHEYLGCYRYNKDISSLLKNGKSFYDKTDQALCRAHCEEYDTAFYAMEHGDICWCPTSPDINDYIIDDVGNCDKPCTGDPSIFCGGVFSISMFEYQDVGSSTGTGEYEEYEXXXXXVQEXDDDGFSSSTESVCTNGVSGIESDGVCCEIRMKVLWTLLLGAAPVAFAEDSTAAVWLGDHSIQGEGLVAETGSSLQRKVSKKNEGPSHHGARSSRKSRPCRKRNNDGVKAEFSLEYEHIGCFADNKTDRVLGHLMKSPLMTSAMCAEHCFGRRATYMALQYGYECWCSRYTELDYSRHSGTDKGDADLCDLSCYGCDAETCGGLYAFDLYKLDGPMPSDSREYVGCFADDQEDRALANKIKFQDNMTQDVCRVYCERFGSSFYATQYGDECWCGATDDVEEYKRHGDGECIAGCFGDPAIACGGYYAFSLFEYLDDDDDETATECADEGSDDDDHGEDAWYTPSPSTARTDSPESPTTSEMPGFMPIDGDLPLCQNSATLA 1737
            MFRFDVSTFFTHIALRVFSRHREHAPHAHTPLSPPSFGRPLYFLLSDDRQGEGLRNGQQGARNPERMKKEKKVEAKASTDHEYLGCYRYNKDISSLLKNGKSFYDKTDQALCRAHCEEYDTAFYAMEHGDICWCPTSPDINDYIIDDVGNCDKPCTGDPSIFCGGVFSISMFEYQDVGSSTGTGEYEEYEXXXXXVQEXDDDGFSSSTESVCTNGVSGIESDGVCCEIRMKVLWTLLLGAAPVAFAEDSTAAVWLGDHSIQGEGLVAETGSSLQRKVSKKNEGPSHHGARSSRKSRPCRKRNNDGVKAEFSLEYEHIGCFADNKTDRVLGHLMKSPLMTSAMCAEHCFGRRATYMALQYGYECWCSRYTELDYSRHSGTDKGDADLCDLSCYGCDAETCGGLYAFDLYKLDGPMPSDSREYVGCFADDQEDRALANKIKFQDNMTQDVCRVYCERFGSSFYATQYGDECWCGATDDVEEYKRHGDGECIAGCFGDPAIACGGYYAFSLFEYLDDDDDETATECADEGSDDDDHGEDAWYTPSPSTARTDSPESPTTSEMPGFMPIDGDLPLCQNSATLA
Sbjct:    1 MFRFDVSTFFTHIALRVFSRHREHAPHAHTPLSPPSFGRPLYFLLSDDRQGEGLRNGQQGARNPERMKKEKKVEAKASTDHEYLGCYRYNKDISSLLKNGKSFYDKTDQALCRAHCEEYDTAFYAMEHGDICWCPTSPDINDYIIDDVGNCDKPCTGDPSIFCGGVFSISMFEYQDVGSSTGTGEYEEYEXXXXXVQEXDDDGFSSSTESVCTNGVSGIESDGVCCEIRMKVLWTLLLGAAPVAFAEDSTAAVWLGDHSIQGEGLVAETGSSLQRKVSKKNEGPSHHGARSSRKSRPCRKRNNDGVKAEFSLEYEHIGCFADNKTDRVLGHLMKSPLMTSAMCAEHCFGRRATYMALQYGYECWCSRYTELDYSRHSGTDKGDADLCDLSCYGCDAETCGGLYAFDLYKLDGPMPSDSREYVGCFADDQEDRALANKIKFQDNMTQDVCRVYCERFGSSFYATQYGDECWCGATDDVEEYKRHGDGECIAGCFGDPAIACGGYYAFSLFEYLDDDDDETATECADEGSDDDDHGEDAWYTPSPSTARTDSPESPTTSEMPGFMPIDGDLPLCQNSATLA 579
[Close]
BLAST of Ec-28_002060.1 vs. uniprot
Match: D8LTS2_ECTSI (Similar to Gram-negative bacteria-binding protein 1, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTS2_ECTSI)

HSP 1 Score: 288 bits (738), Expect = 1.380e-90
Identity = 151/206 (73.30%), Postives = 163/206 (79.13%), Query Frame = 1 
Query:  139 DDRQGEGLRNGQQGARNPERMKKEKKVEAKASTDHEYLGCYRYNKDISSLLKNGKSFYDKTDQALCRAHCEEYDTAFYAMEHGDICWCPTSPDINDYIIDDVGNCDKPCTGDPSIFCGGVFSISMFEYQDVGSSTGTGEYEEYEXXXXXVQEXDDD-----------------------GFSSSTE-SVCTNGVSGIESDGVCCEI 684
            D  QGEG+RNGQQGAR+ +RMK+EKKV+A+ASTDHEYLGCYRYNK+   LLKNGKSF+DKTDQALCRAHCEEYDTAFYA+E GD+CWCPTSPDINDYIID+VG CDKPCTGDPSIFCGGV SISMFEYQDV SST TGEYEE + XXXX   X                          GFSSSTE SVCTNGVSGIESDGVCCEI
Sbjct:   12 DSNQGEGVRNGQQGARSLKRMKREKKVKARASTDHEYLGCYRYNKENGMLLKNGKSFFDKTDQALCRAHCEEYDTAFYALEDGDVCWCPTSPDINDYIIDEVGICDKPCTGDPSIFCGGVSSISMFEYQDVDSSTSTGEYEEDDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFSSSTEESVCTNGVSGIESDGVCCEI 217
[Close]
BLAST of Ec-28_002060.1 vs. uniprot
Match: D8LED7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED7_ECTSI)

HSP 1 Score: 255 bits (652), Expect = 3.040e-71
Identity = 114/198 (57.58%), Postives = 142/198 (71.72%), Query Frame = 1 
Query:  940 YEHIGCFADNKTDRVLGHLMKSPLMTSAMCAEHCFGRRATYMALQYGYECWCSRYTELDYSRHSGTDKGDADLCDLSCYGCDAETCGGLYAFDLYKLDGPMPSDSREYVGCFADDQEDRALANKIKFQDNMTQDVCRVYCERFGSSFYATQYGDECWCGATDDVEEYKRHGDGECIAGCFGDPAIACGGYYAFSLFEY 1533
            Y ++GCFAD+K DRV  ++  S  MT+A+C E+C  RRATYMA QYGYECWCS   E++Y RHS        +CD +C G  A+ CGG  AFDLYK+  P      EYVGCFADD+EDR L ++IK Q +MTQ VCR YCE   + FYATQYGDECWCG ++D E+YKRHG G C+AGC GDP +ACGG+ AF+LF++
Sbjct:  433 YSYVGCFADSKEDRVFEYMKTSSTMTTAVCLEYCLDRRATYMATQYGYECWCSVDAEVEYDRHSD------GVCDHACGGDAADICGGFDAFDLYKITEPTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQAVCRTYCEERDAYFYATQYGDECWCGMSNDEEDYKRHGRGSCLAGCSGDPTVACGGFDAFNLFKF 624
[Close]
BLAST of Ec-28_002060.1 vs. uniprot
Match: A0A6H5JMV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMV6_9PHAE)

HSP 1 Score: 239 bits (611), Expect = 8.660e-69
Identity = 105/198 (53.03%), Postives = 136/198 (68.69%), Query Frame = 1 
Query:  940 YEHIGCFADNKTDRVLGHLMKSPLMTSAMCAEHCFGRRATYMALQYGYECWCSRYTELDYSRHSGTDKGDADLCDLSCYGCDAETCGGLYAFDLYKLDGPMPSDSREYVGCFADDQEDRALANKIKFQDNMTQDVCRVYCERFGSSFYATQYGDECWCGATDDVEEYKRHGDGECIAGCFGDPAIACGGYYAFSLFEY 1533
            Y ++GCFAD+K DRV  ++  SP MT+A+C E+C  RRAT+MA Q+G ECWCS   E++Y RHS        +CD  C G   + CGG  AFDLYK+  P      EYVGCFADD+EDR L ++IK Q +MTQ VCR YCE   + FYATQYGDECWCG ++D ++YKRHG G C+AGC GDP +ACG  +   ++++
Sbjct:   11 YSYVGCFADSKDDRVFEYMKTSPTMTTAVCLEYCLDRRATFMATQFGIECWCSVDAEIEYDRHSD------GVCDCECGGEATDICGGFDAFDLYKITEPTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQTVCRTYCEERDAYFYATQYGDECWCGMSEDEQDYKRHGRGSCLAGCSGDPTVACGRDFQVVIYKH 202
[Close]
BLAST of Ec-28_002060.1 vs. uniprot
Match: A0A6H5JN72_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JN72_9PHAE)

HSP 1 Score: 243 bits (620), Expect = 2.510e-68
Identity = 116/217 (53.46%), Postives = 140/217 (64.52%), Query Frame = 1 
Query:  940 YEHIGCFADNKTDRVLGHLMKSPLMTSAMCAEHCFGRRATYMALQYGYECWCSRYTELDYSRHSG----TDKGDADLCDLSCYGCDAE----TCGGLYAFD------------LYKLDGPMPSDSREYVGCFADDQEDRALANKIKFQDNMTQDVCRVYCERFGSSFYATQYGDECWCGATDDVEEYKRHGDGECIAGCFGDPAIACGGYYAFSLFE 1530
            Y H+GCF+DNK DRVL  ++ S  MT AMC EHC  RRATYMA QYG+ECWCS  ++LDY+RHS      D  D  LC   C G        +C    A +            LYK+  P   +  EYVGCFADD +DR L N+IK+Q +MTQ VCR YCE FG+ FYATQYGDECWCG +DD E+YKRHG G C+A C GDP  ACGG+ +F+LF+
Sbjct:  451 YTHVGCFSDNKEDRVLEAMITSSAMTGAMCYEHCVDRRATYMATQYGFECWCSHDSDLDYARHSDDLERVDGRDYGLCGTRCEGDKVRILHGSCRQREALENHAMGEIRNLHYLYKITEPTEPEGEEYVGCFADDGDDRLLKNEIKYQPDMTQAVCRTYCEGFGAHFYATQYGDECWCGTSDDKEDYKRHGHGSCVAQCSGDPTTACGGFDSFNLFK 667
[Close]
BLAST of Ec-28_002060.1 vs. uniprot
Match: D8LED9_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED9_ECTSI)

HSP 1 Score: 238 bits (607), Expect = 4.070e-67
Identity = 109/206 (52.91%), Postives = 138/206 (66.99%), Query Frame = 1 
Query:  916 VKAEFSLEYEHIGCFADNKTDRVLGHLMKSPLMTSAMCAEHCFGRRATYMALQYGYECWCSRYTELDYSRHSGTDKGDADLCDLSCYGCDAETCGGLYAFDLYKLDGPMPSDSREYVGCFADDQEDRALANKIKFQDNMTQDVCRVYCERFGSSFYATQYGDECWCGATDDVEEYKRHGDGECIAGCFGDPAIACGGYYAFSLFEY 1533
            V       Y ++GCFADNK DRV  ++  S  MT+A+C E+C  RRATYMA QYG ECWCS   E +Y RHS        +CD +C G +A+ CGG  AFDLYK+  P      EYVGCFAD+ ED  L  +IK Q +MTQ VCR YCE   ++FYATQ G+ECWCG +++ E+Y R G G C+AGC GDPA+ACGG+ AF+LF++
Sbjct:  392 VTLPVEASYSYVGCFADNKHDRVFEYMRTSFTMTTAVCLEYCLERRATYMATQYGIECWCSVDAETEYDRHSD------GVCDHACGGDEADYCGGFDAFDLYKITEPREPTGDEYVGCFADNPEDWVLGGEIKSQPDMTQAVCRTYCEDLDANFYATQNGEECWCGMSEEEEDYTRSGRGSCLAGCSGDPAVACGGFNAFNLFKF 591
[Close]
BLAST of Ec-28_002060.1 vs. uniprot
Match: D8LED5_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED5_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 2.310e-52
Identity = 94/182 (51.65%), Postives = 115/182 (63.19%), Query Frame = 1 
Query: 1024 MCAEHCFGRRATYMALQYGYECWCSRYTELDYSRHSGTDKGDADLCDLSCYGCDAETCGGLYAFD----------LYKLDGPMPSDSREYVGCFADDQEDRALANKIKFQDNMTQDVCRVYCERFGSSFYATQYGDECWCGATDDVEEYKRHGDGECIAGCFGDPAIACGGYYAFSLFEYLD 1539
            MC EHC+   A YMA Q+G+ECWCS  T+LDYSRHS    G   LC  +C G   +TC    A D          L   +G    +  EYVGCFADD EDR L N+IK+Q +MTQ VCR YCE + + FYATQYGDECWCG ++D E+YKRHG G C+  C GDP   CGG  AF+L++ +D
Sbjct:  276 MCYEHCYSEGAAYMATQFGFECWCSDDTDLDYSRHSDNIDGGDGLCTTACQG---DTCWRERALDACAVLVDRRALLVEEG---DEVDEYVGCFADDPEDRLLGNEIKYQPDMTQAVCRTYCEGYDAHFYATQYGDECWCGMSNDEEDYKRHGSGSCLMECSGDPGTVCGGNDAFNLYKNMD 451
[Close]
BLAST of Ec-28_002060.1 vs. uniprot
Match: A0A6H5JLD0_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLD0_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 4.970e-51
Identity = 95/200 (47.50%), Postives = 116/200 (58.00%), Query Frame = 1 
Query:  997 MKSPLMTSAMCAEHCFGRRATYMALQYGYECWCSRYTELDYSRHSGTDKGDADLCDLSCYGCDAETCGG---------------LYAFDLYKLDGPMPSDSR----EYVGCFADDQEDRALANKIKFQDNMTQDVCRVYCERFGSSFYATQYGDECWCGATDDVEEYKRHGDGECIAGCFGDPAIACGGYYAFSLFEYLD 1539
            M+  L  + MC EHC    A YMA Q+G+EC CS   +LDY+RHS   +G   LC   C G    T                  L   DLYK+  P   +      EYVGCFADD EDR L N+IK Q +MTQ VCRVYCE + + FYATQYGDECWCG ++D E+YKRHG G C+  C GD A  CGG+ AF+L++  D
Sbjct:    1 MRVFLCRTQMCYEHCHSEGAAYMATQFGFECLCSHDADLDYARHS---EGTDGLCMTECEGDTLPTSTSWRGRSSRRNVCLELALLFPDLYKIAEPKEVEXXXXXXEYVGCFADDPEDRLLGNEIKHQPDMTQVVCRVYCEGYDAQFYATQYGDECWCGMSNDEEDYKRHGSGSCLMECSGDSATVCGGFNAFNLYKNKD 197
[Close]
BLAST of Ec-28_002060.1 vs. uniprot
Match: D8LGP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP4_ECTSI)

HSP 1 Score: 173 bits (439), Expect = 4.540e-44
Identity = 86/208 (41.35%), Postives = 116/208 (55.77%), Query Frame = 1 
Query:  913 GVKAEFSLEYEHIGCFADNKTDRVLGHL-MKSPLMTSAMCAEHCFGRRATYMALQYGYECWCSRYTELDYSRHSGTDKGDADLCDLSCYGCDAETCGGLYAFDLYKLDGPMPSDSREYVGCFADDQEDRALANKIKFQDNMTQDVCRVYCERFGSSFYATQYGDECWCGATDDVEEYKRHGDGECIAGCFGDPAIACGGYYAFSLFEY 1533
            G+       YEH+GC+ DN       HL +    MT+ MC + C    + +M  Q G EC CSR  +L YS        D  +CD+ C G   ETCGG    DLYKL      D  EYVGC++D  E R + + +   + MT D+CR +CE   + +YATQYG+EC+CG + D E+Y+ HG G C   C GD   ACGGY+AFSL+++
Sbjct:   35 GLSGSSYEAYEHVGCYVDNGMVNARPHLPLVMETMTNEMCYDRCHELGSFFMGTQKGNECRCSREEDLAYSAF------DFGVCDIPCAGDSDETCGGQLTIDLYKLTAAQTPDHEEYVGCWSDANESRVMEDML-VDEGMTTDMCRDHCESSDAVYYATQYGNECFCGYSSDPEDYETHGLGTCHMHCGGDSGSACGGYWAFSLYQF 235
[Close]
BLAST of Ec-28_002060.1 vs. uniprot
Match: A0A6H5KBW3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW3_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 1.020e-41
Identity = 88/209 (42.11%), Postives = 117/209 (55.98%), Query Frame = 1 
Query:  913 GVKAEFSLEYEHIGCFADNKTDRVLGHL-MKSPLMTSAMCAEHCFGRRATYMALQYGYECWCSRYTELDY-SRHSGTDKGDADLCDLSCYGCDAETCGGLYAFDLYKLDGPMPSDSREYVGCFADDQEDRALANKIKFQDNMTQDVCRVYCERFGSSFYATQYGDECWCGATDDVEEYKRHGDGECIAGCFGDPAIACGGYYAFSLFEY 1533
            G+       YEH+GC+ DN       HL +    MT+ +C + C    A +M  Q G EC CSR  +LDY S  SG       +CD  C G   ETCGG    DLYKL      D  EY GC++D  E R + + +   ++MT D+CR +CE   + +YATQYG+EC+CG + D E+Y+ HG G C   C GD   ACGGY+AFSLF++
Sbjct:  101 GLSGSSYESYEHLGCYVDNGMVNSSPHLPLVLDAMTNELCYDRCHELGAFFMGTQKGNECRCSREEDLDYFSFESG-------VCDEPCAGDSTETCGGDLTLDLYKLTPADEPDHEEYEGCWSDLGESRVMQDML-VDESMTTDMCRDHCESSDAVYYATQYGNECFCGYSSDPEDYETHGPGTCHMHCAGDSGSACGGYWAFSLFKF 301
The following BLAST results are available for this feature:
BLAST of Ec-28_002060.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXK6_ECTSI0.000e+0100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LTS2_ECTSI1.380e-9073.30Similar to Gram-negative bacteria-binding protein ... [more]
D8LED7_ECTSI3.040e-7157.58EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JMV6_9PHAE8.660e-6953.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN72_9PHAE2.510e-6853.46Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LED9_ECTSI4.070e-6752.91EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LED5_ECTSI2.310e-5251.65EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JLD0_9PHAE4.970e-5147.50WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LGP4_ECTSI4.540e-4441.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KBW3_9PHAE1.020e-4142.11Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:1856887..1872651 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score285.4
Seed ortholog evalue5.9e-74
Seed eggNOG ortholog2880.D8LTS2
Length1740
Hectar predicted targeting categorymitochondrion
Gene idEc-28_002060.1
EggNOG free text desc.WSC domain
EggNOG OGs2EWMG@1,2SYEH@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_002060Ec-28_002060Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_28 1856887..1872651 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_002060.1.14Ec-28_002060.1.14Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1856887..1857125 -
Ec-28_002060.1.13Ec-28_002060.1.13Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1857616..1857724 -
Ec-28_002060.1.12Ec-28_002060.1.12Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1858060..1858235 -
Ec-28_002060.1.11Ec-28_002060.1.11Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1858518..1858548 -
Ec-28_002060.1.10Ec-28_002060.1.10Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1859072..1859233 -
Ec-28_002060.1.9Ec-28_002060.1.9Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1859729..1859827 -
Ec-28_002060.1.8Ec-28_002060.1.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1860201..1860341 -
Ec-28_002060.1.7Ec-28_002060.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1861105..1861201 -
Ec-28_002060.1.6Ec-28_002060.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1869216..1869276 -
Ec-28_002060.1.5Ec-28_002060.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1869521..1869655 -
Ec-28_002060.1.4Ec-28_002060.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1869984..1870092 -
Ec-28_002060.1.3Ec-28_002060.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1870449..1870634 -
Ec-28_002060.1.2Ec-28_002060.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1870994..1871038 -
Ec-28_002060.1.1Ec-28_002060.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1872502..1872651 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_002060.1CDS:Ec-28_002060.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_28 1856887..1857125 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_002060.1Ec-28_002060.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_28 1856887..1872651 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-28_002060.1 ID=Ec-28_002060.1|Name=Ec-28_002060.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=580bp
MFRFDVSTFFTHIALRVFSRHREHAPHAHTPLSPPSFGRPLYFLLSDDRQ
GEGLRNGQQGARNPERMKKEKKVEAKASTDHEYLGCYRYNKDISSLLKNG
KSFYDKTDQALCRAHCEEYDTAFYAMEHGDICWCPTSPDINDYIIDDVGN
CDKPCTGDPSIFCGGVFSISMFEYQDVGSSTGTGEYEEYESSSGTVQEDD
DDGFSSSTESVCTNGVSGIESDGVCCEIRMKVLWTLLLGAAPVAFAEDST
AAVWLGDHSIQGEGLVAETGSSLQRKVSKKNEGPSHHGARSSRKSRPCRK
RNNDGVKAEFSLEYEHIGCFADNKTDRVLGHLMKSPLMTSAMCAEHCFGR
RATYMALQYGYECWCSRYTELDYSRHSGTDKGDADLCDLSCYGCDAETCG
GLYAFDLYKLDGPMPSDSREYVGCFADDQEDRALANKIKFQDNMTQDVCR
VYCERFGSSFYATQYGDECWCGATDDVEEYKRHGDGECIAGCFGDPAIAC
GGYYAFSLFEYLDDDDDETATECADEGSDDDDHGEDAWYTPSPSTARTDS
PESPTTSEMPGFMPIDGDLPLCQNSATLA*
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spliced messenger RNA

>Ec-28_002060.1 ID=Ec-28_002060.1|Name=Ec-28_002060.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1740bp|location=Sequence derived from alignment at chr_28:1856887..1872651- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGTTCCGTTTCGACGTTTCGACCTTCTTCACACATATCGCCCTACGTGT
TTTTTCACGACACAGAGAGCACGCCCCACACGCCCACACGCCACTCTCCC
CCCCTTCGTTTGGAAGACCGCTATACTTCCTACTTTCCGACGACCGACAG
GGTGAAGGGTTGAGGAATGGTCAGCAGGGCGCCCGAAACCCCGAGAGAAT
GAAGAAGGAGAAGAAGGTGGAAGCCAAGGCATCCACCGATCACGAGTACC
TCGGCTGCTACCGCTACAACAAGGACATTAGTAGCCTCCTGAAGAACGGG
AAATCGTTCTACGACAAGACGGATCAGGCCCTGTGCCGCGCCCACTGCGA
AGAGTACGATACAGCCTTCTATGCCATGGAGCACGGGGATATCTGCTGGT
GCCCTACTTCTCCCGACATCAACGACTACATCATAGACGATGTTGGTAAC
TGCGACAAGCCCTGCACTGGAGACCCGAGCATTTTTTGCGGCGGGGTCTT
CTCTATTAGCATGTTCGAGTACCAGGATGTCGGCAGCTCCACCGGCACGG
GCGAGTACGAGGAATACGAGAGCTCCAGCGGTACTGTCCAGGAAGACGAT
GACGACGGTTTCAGCAGCTCCACTGAATCGGTTTGCACCAACGGCGTCTC
CGGCATCGAGTCCGACGGTGTTTGCTGCGAGATCAGGATGAAGGTGCTTT
GGACCCTCCTTCTCGGCGCGGCTCCCGTCGCATTTGCGGAAGATTCGACG
GCGGCTGTATGGCTGGGCGACCACTCAATTCAGGGCGAGGGGTTGGTCGC
TGAGACAGGAAGCTCTCTCCAACGGAAAGTCTCCAAGAAAAATGAAGGCC
CTTCACATCACGGCGCTCGCTCCAGCCGCAAATCTCGCCCATGCCGCAAG
CGCAACAACGACGGGGTCAAGGCGGAATTCTCCCTCGAGTACGAGCACAT
CGGATGCTTTGCTGACAACAAAACCGACCGGGTGCTCGGACACCTGATGA
AGTCACCTCTTATGACGAGCGCTATGTGCGCCGAGCACTGCTTCGGAAGA
CGCGCCACCTACATGGCCCTTCAGTACGGGTATGAATGCTGGTGCAGCCG
GTACACGGAGCTTGACTATTCTCGCCACTCTGGGACGGACAAGGGCGACG
CGGACCTATGCGATCTTAGCTGCTACGGATGTGACGCTGAGACTTGCGGA
GGATTATATGCCTTCGACCTGTACAAACTCGACGGCCCAATGCCGTCCGA
CAGTCGCGAGTATGTAGGCTGCTTCGCAGATGACCAGGAGGACAGGGCAC
TGGCAAACAAGATAAAGTTCCAGGACAACATGACCCAGGACGTCTGCCGC
GTCTACTGTGAAAGGTTCGGCTCGAGCTTCTACGCCACTCAGTACGGAGA
TGAGTGCTGGTGTGGTGCGACCGACGACGTCGAGGAGTACAAACGGCACG
GGGACGGCGAGTGCATCGCCGGCTGTTTCGGGGACCCGGCGATAGCTTGT
GGCGGATACTATGCCTTTAGTCTGTTCGAGTACTTGGACGACGACGACGA
CGAGACCGCCACCGAGTGCGCCGACGAGGGTAGCGACGACGACGACCACG
GCGAAGACGCTTGGTATACCCCGTCTCCGTCGACCGCCCGCACGGACAGC
CCAGAATCTCCGACAACCTCGGAGATGCCCGGGTTCATGCCTATCGATGG
TGATTTGCCGCTGTGTCAGAATTCTGCAACCTTGGCTTGA
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protein sequence of Ec-28_002060.1

>Ec-28_002060.1 ID=Ec-28_002060.1|Name=Ec-28_002060.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=580bp
MFRFDVSTFFTHIALRVFSRHREHAPHAHTPLSPPSFGRPLYFLLSDDRQ
GEGLRNGQQGARNPERMKKEKKVEAKASTDHEYLGCYRYNKDISSLLKNG
KSFYDKTDQALCRAHCEEYDTAFYAMEHGDICWCPTSPDINDYIIDDVGN
CDKPCTGDPSIFCGGVFSISMFEYQDVGSSTGTGEYEEYESSSGTVQEDD
DDGFSSSTESVCTNGVSGIESDGVCCEIRMKVLWTLLLGAAPVAFAEDST
AAVWLGDHSIQGEGLVAETGSSLQRKVSKKNEGPSHHGARSSRKSRPCRK
RNNDGVKAEFSLEYEHIGCFADNKTDRVLGHLMKSPLMTSAMCAEHCFGR
RATYMALQYGYECWCSRYTELDYSRHSGTDKGDADLCDLSCYGCDAETCG
GLYAFDLYKLDGPMPSDSREYVGCFADDQEDRALANKIKFQDNMTQDVCR
VYCERFGSSFYATQYGDECWCGATDDVEEYKRHGDGECIAGCFGDPAIAC
GGYYAFSLFEYLDDDDDETATECADEGSDDDDHGEDAWYTPSPSTARTDS
PESPTTSEMPGFMPIDGDLPLCQNSATLA*
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mRNA from alignment at chr_28:1856887..1872651-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-28_002060.1 ID=Ec-28_002060.1|Name=Ec-28_002060.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=15765bp|location=Sequence derived from alignment at chr_28:1856887..1872651- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTTCCGTTTCGACGTTTCGACCTTCTTCACACATATCGCCCTACGTGT
TTTTTCACGACACAGAGAGCACGCCCCACACGCCCACACGCCACTCTCCC
CCCCTTCGTTTGGAAGACCGCTATACTTCCTACTTTCCGACGACCGACAG
GTAAGAGCGTGATACGTCTTGCGGGCAGGTAGAGGCCAAACAGTCGACTA
CACCCTACATACATAGGCATCATTCGTCTCTCCACACCGTACTCTCACTG
TTCTCAAGAAACCGACGTCGTCGATCTGATATGACCCCATGTTATAGCTC
TAGTAGTTGTGCCATTCCGTTCTTTATGCCCTGCCCGGCGTTGCGGACGT
GTGCTGTGGTCGTGTGCTGAATTGATTTTTCAGATACAGCACGATGGTCA
AACTTGCGGTTTGCCTTGTCCTCGTCACGGCTACCGTGGCACTAGCCGGC
GGTTCGTATCAGGTGCGTACGATTTCCTTTTGGGGGAGAGGCTGCATAGA
CTGCTGTAAAGAATAGCGCTTCATCTCTTTGCCCTCTCCTATGTAGCGCG
ATTTTGTGGCTGGATTTTGTACACTCACAACAGGTAAGATGCAACGAATA
TTTGTCCACCGCAGCAATTAAATGCGATAGTCTCTCGCGGTACTGAGGTT
CTCAATTGCCTTGATGGCGGCCACCGCCCCTACTTCGCATTAGGGCATAG
GCGCGTGACGGGCGGGAGAATGTTCGACCAACCAAAAAAATGCGCCGCAG
CAGGGCTGTGTGAGGAGATCGGGCCCGGCTCGTGCCCTTTCAGTAGGCGG
GAAACAAAAGTGCTTTCCAGAAAACGCTCTTCTTGAATGCTTGGGCGAGA
ACCATGCTTAGCCACCCACAACATTATCTAAACTAACCCTTCGCTGTATG
TGGTCTGTATCGTGGTGAGCGTAGTTGTTGATAGTTTCGGCTGGCCAAAT
GTCGCATATCCGGGAAACTTCGAGCGAGGGAGAGATTCAACCGGCCCATG
AATTTGTTCGATCTGTAAGGTTGTACCATAAATACATATAGGGCGTACAC
CTGAGGGATTCGAGGAACGTGTTTGATATTTTCCGATGGGCTTCATTTCG
TGTTCATACAGCAGACCCTTGGATGACAAAGGATGCTAGTTTGCAGTATG
CACATCCCAAGTGTGTAGGACGATCCCCATGTAGCTGAAGATTTGTCCAG
AAAACCCGAACAATAATACAATATGCTTTTAATCTGGGTCCTAGGCTTTC
CTCGAGCTGAATTATCCGTATCGAATTTCAAGGCTGTTGCTGTTCCAGCC
CACTCAACAACTTGATGTGAAGGCACCCACAGGACGATAATCGACTGCGT
TCACAACGAACGAGAGGAATTAGTCACACTCGTTTTTGATCCAGATCCCG
CCCAGTCCTTACCCTCTCCTTCCACCACTCACTCCTCTTGACATCATGTT
GTCATGACAAAAAACGGCGGGCGCTACATGTATTCAATGTTCCATTTGAG
TATCAGTTGCTTGTTTCATGCGCTCATGTTCACATCGCTTCGGCCTCTGT
GACTCTCCGCCTGTTTTTCCCGGATCGCTCCATTCACACTCGTTTGCTTC
TTTTCTTGTGCAGGGTGAAGGGTTGAGGAATGGTCAGCAGGGCGCCCGAA
ACCCCGAGGTACGATTAGTTTGACACCCAAGAAAAACGAGTACACAAACT
CAAAGTACAGACACCTGTATCTGGTTACATACATCTATCTACAGCAGTAG
TAATGTTCTACCAAAGGGGAGACTTAGGAGCGCATCACAATACTCATAAA
TACCATTTTTTGTAGTGCCAGGTGTCACCACGGATGGTATGTGGGCCACG
ACAACATGCGATTGCTGCACTAAAGTAACAAACTGCTATTTGCATGACTA
TTTGCTGTAAACGTGTTTCGCTTCTCTCTCCGATGTACGCATATCTATGT
ATATGAATGATTGTATTGTTTTGGCGAACTCCCTCGCTTGCGTTCGTTTG
GGGCGTCGTGTCTACAGAGAATGAAGAAGGAGAAGAAGGTGGAAGCCAAG
GCATCCACCGATCACGAGTACCTCGGCTGCTACCGCTACAACAAGGACAT
TAGTAGCCTCCTGAAGAACGGGAAATCGTTCTACGACAAGACGGATCAGG
CCCTGTGCCGCGCCCACTGCGAAGAGTACGATACAGCCTTCTATGCCATG
GAGGTATGAGTTTGAAGTGTAACGCCTTCGGCCATGTCCTGTTTGGATGG
GAGTGGTAGATTGAATCACAACCACCAATATGGTGCCAATACGTTGTTTG
ATATTGCACGGACCGAAGCACCCGTGATCTCAGACCACATCCCTACACAC
AGATTTGAAGCAGGGCACTCAGGACGTACGCCATAAACATCGTCCCTTGA
TATCGACTGCACAAACGGAACAACTTGGCCACCAGTGGTTAATGCTGACA
ATATGGATCCATACGCGACGGATTGATTCTTAAAGACTCTCATTTCCCCC
GCTATTGAGTTCATCGTCTTATCGTACTCCCCCCCACTTTTCATATTCCA
ACAAAACAGCACGGGGATATCTGCTGGTGCCCTACTTCTCCCGACATCAA
CGACTACATCATAGACGATGTTGGTAACTGCGACAAGCCCTGCACTGGAG
ACCCGAGCATTTTTTGCGGTGAGTCCAAATGAAGGGCAAGCGACATATGA
GGTTGTTTGATGGTGCAAGGTGGAAGGGAATATGTGAAGGCGGAGAAAGG
GGGTATCAACACAACTAAGAGAGGCAATGAGAAAGCATTAGCCACCCAGG
CTGTCCGTCACCGCGCCTTCTACGCCCTCCTAACACGTACCCGGGCACTT
GTAGCATATCACGAACTGTTGAGCCGCTGACCCATCCAGCCGACCATTGG
TTAGGATACCGCCCTTGTTTACGTTAGGATACCGCATACATACGCTTACC
CTCCTACCCTTGTCGCTTTTCACCATCATCACCCCCCTTACTCCAGGCGG
GGTCTTCTCTATTAGCATGTTCGAGTACCAGGATGTCGGCAGCTCCACCG
GCACGGGCGAGTACGAGGAATACGAGAGCTCCAGCGGTACTGTCCAGGAA
GACGATGACGACGGTTTCAGCAGCTCCACTGGTGTGTAAACGTGATTTTG
ACACCGGGCTTTACAGCATAAAGTGTCTATTTCGCCCCCTTGAAATGTAT
CGTTTGGAAATATTTCGTGTGTCGTATATGACCTTGGTTCCCTCATTGTC
ATTTGGTTTTTCTTGTATGGCCCCCACGACTCATATGATTCGCTTTCGTA
CGCCCCCAGCGCCTCGATTTCATTGTACTCGATGAACACCGTGCTATCTT
TGTTCACGTGATCGTTGTTGCACAGAATCGGTTTGCACCAACGGCGTCTC
CGGCATCGAGTCCGACGGTGTTTGCTGCGAGATCAGGTACGTCGAAACAG
TCATGCGTAGCCCACTCGCCATTCGGCAGTTGGGATAGCGTTACTTCACG
AGGTCGCTAGCGTATTTTGGTTGCGATTTATATATCATCGTACCATGGTA
TATGAATGACAGCGGGTAGCCTCGCGTGCCGACCACTCTCGGACCCGAAC
TCTCTTCCCCCCTTACCTCAACTTAGGTCATGTCTCAATCTAGGTGCCTC
GTTGGACGTGCCGCCACTATTCATATGTGGGGTCTTATCTCAGCCCGAGA
TGGATGGCATATATATATCGTCTCTTGACACTAGAGAAGAAAGCATGGCT
CCCCGTGAAATGCGCCATCCCCGCAGCCAGGCACTCGTTAGGTCATGAAT
GCGTGTTCAGGTCTTGCCGCGATAGTGCACATTAGGCAATGGTACAACAG
CAACGTAGACGATCGCGTGTGCAGGGAGCGCGTGCGCTCCACGACGAGCG
TGCCTATCACTCAAATCCCTTTCTCCCAACTCACCACCCCTATCCCATGC
GGTTTTCGAAATTTCGGGCACCTGATGAAGACTTCGAGGGCCTGCAAACG
CTTAATGGTTCGCGACCACATGTGGATGTTTTCATAACCATAAGAACAAA
CCTCGTTGTTTGGGTGCATTTGGTCTCGACGCAGTTGCGGGCAGTGCGGC
GGTTCCGGCTGTTCATCGCGTGGCAACGGCGCCCAATCCTGCTGCACGAG
CACAATTCTGGAGTTCGGGGAAGTTTGCGGCGTGGCACCCTGCATCATCT
AAGGCGCTGAGGGAACGTTCTCACATGTATGCACCAACGTTGAAGCCGGT
TTCCCGTTTCTTAGGGTGGTGTTTGGTTCTCTAACGTCGTTGATAGTTGC
TGTCATCGATTTGGATCAGTCTATGTCATTGGCCTCAACATCCGACAACG
ACATTGTCGTCTCCGGTTTCATTTCATTTCGCTTTCTACGGCCCCGAGAC
GAAGGGCAATGCCGGAGTTACTGTCAGAGAAACACACGGACCAGCGCTTG
AACGGCCGTGCAATTCCTGAAACACTCCTCGTTCTGCCCCATTGTTTTGG
TTGTTTCGCGTCTGTACCTGTCCAGACGTACCAGGATCAGTGACTGCGAG
ACATGAGGGATATACCATGGTATATGAGCGAGCCCAAACGGAACGACCAA
GAGGGTCCGCGCTGTTGCTTGCTAAGGGAAGGCTTGTATTCACAGATGTA
TCAACATGGACATTTATGTGTCGACATGTATTATGTGTCGCCTGGAGCAG
ATTGAACTACAGTACCAGAACTTCGTCTTTCTGCATATGATAAACGACGT
CAGTATCTAGGCTGTTCTTTGCGGGCATCAGCTGTTGCTGCCGTGGCGGT
TTCTAGGCACTAAAATGTGAAATCTACTCTGGAGATAGTCGCAATATGGG
GTTCCAGGGTCCATTGGTTCTTCCGGATTAGGTCTGGTTAATGCCTGCAT
GAGGTGAAGGCGGCTCGAAAATAAGTGATGCCGAAGAAATACGATGGGAG
AGGCATGTCTGGGCGTAGAGTTTTTAGGATATGGCCCTATTTGTTGGGCA
GTGCCTTCTGACGTGTCATCACTGTGTCGGGCTCTGTGTAGAGAATCCTT
GGGTTCCACGGAGGTCGATTCAAGTTTGGTCAGCATATGTTGAGGTGTGG
TCTGCTGTGCCAATTTTTGCTGGCGTTTGGATGTTGCTTGATGTGCTGTA
GTACATATCGGTCTGGGCAAGACGTCGGTGTTGGTGTTGACGTTTGAGAA
TCAGAAAAGCATCTCGTTTGTTGAAAACCGAGATCGTCATCTTGGGCCGA
CGAAAACGACCTCTGACTGCGACAGAGGACTGCCCACCTAAGGTCTAATC
CCCTTGCCGGTACCCCTCATCCCCATTTGCTCAACTCCTCCAGAAACACT
TCCACCGATTCGCCCCCGCCGCCAACAAAACGATCCCATCAGTTGTGACT
CAGGAGCTTTCCTTGCCGCGCCGGCAGTGAGATTCTGAGGCTGCAACAGT
ATCCTCCCACCGGACTCTCCCTGCCCCACGTGATGATTGCTGCTCGACCC
AGCAGTTTGGATATCGTCTCACACATATGGCGTTCGTGATAGTCTTGTTG
TCTTGTGCAAACCAGTGACAGGAGGCAGGCACAGGTTTGCATGTTTCAGG
AAAAGTTACAGTAGGGAGCGCTGTTAGCTTAGTACTTCTAGTATATGTTT
GAATTGGTACAACTATTTCTGGACATTGCATTGGAGGAAGGATTTGGCAC
GTGTTCATGATGAGTTATGATTGAAGCCCCCGCGCTTTCCGTATGCTCGT
TTTCTTTGCCAAGAAGTGGAAACAAACTTCGTTTTGTTCGAGTATGTTGC
GTCAACTATGTGAAGCTGTCTTCCAATGCCCGTCATTGCTCCGACGCTTG
TCTGATGAAGTAGCACAAATGCTTGTTGGCTGGTCTTCTGAGGATGAAAA
GTTTGTGCTGACTGTTTGAGATCACATCCCGGGACGAATGCATTGGTTCG
TGGATGAACTGATGTGGACGCTTCGCGCTGAATTCATAGATAGTAAGTTT
TTGTAGGGCATATCCAGTGGTGTTATTGGTGTTTTGGTATACATATTTGT
ATAGGTCTGTGGTTGGATGATATTTCACAACGGACTTCAATTCAAGGTCG
TTTGTCGTATTATCAAGTAGGGGGGGCTGTTTGGGGTACATGGATCTGGA
CACAAGACATCCGATCTGGGAAATACATGTGTTTGGGGGGTATGCTGTTG
GGGTCCAAGTGCGGGGCCTATTGAGACAGAGCACGGACACGTGGGAATTG
TTGTCTACCTTGGTTGCTCTTTACCTACAGTATGTCTGTGTGCTGGAAGG
ACCACGGTGTGCGGCACTCAAGGTGTATGTCATCAACATATGTCCTGGGT
GAACCTGTTGTCCCAAAATTCGAACCCTAAACTCCGCGGGAAGGCGCGGA
CGGCTACTAGTCCTAATCGCAACGAAAAGCAAGCGTGCTTGTCGGTGAAA
GCCAAGCTGCAATCGACCCAGCAACCGCCGTTGAGTGCTGTCGGGCGGTG
CCTCTTTGATCGATAATTCGGGTGGCTCAGTTGTGTGTGATGGGAGCGTA
GAGCAGCTCGGCCATGACGGGCCGCACGGGTAGGTAAAGACGTGTAGACG
TGGTGAAAAACGTGTTGTATTCATCGGGGGCGTGCTTGAGCTCGTCATTC
CATCACGGCATCAAGTCACGCATAACGCTTTAATACCCAGAACGAATCTC
CATGAATCTCCACCAATCTACTACACTCCCAAGGAAAACACAAAGAAACT
TCTTGTCCCTCCGTAGTTCGTCACTGCAATCCCCGCATATGTATACGCAA
TATACCACCCCCATGCTATGCTACGAGTATATCGAATAGCCCCCCTGCTC
GTATGCATCGTCATGCTCCAACAAAATATCAAAGTCATCCTTATCATACC
AGTTCATCCCAAAACAAATCAAAACCAAGACAAAATCGAAAACTCCAACA
CCAAAACAATACCTCCAAAAACAATCAATCGCATACCAACTCTTCCAAAT
CATCAAGAAAAATCCCGAACATTAACCTTCCAAAACACTACCATCTCCAC
TTGACCCTCTCTATCTCTTGTTCAAACTCGTACATATCCTCTCTCTTCCA
CTCAACGGCAAAGCACGATTTGATCCCAAAACACCTCTGTCACTGCAAAT
TCATCACAAAGTCTCTGTGCAACGCAAAAGATTCCTTGCTGATAGCCTTC
GTCAAGAAATCTGCATGCTGAAACTCCGACGCCACATGAGTAATCGAAAT
CTCCTTCCTCTCTACCAGTTCCCTGATAAAGTGATGCCGTACATCAATGT
GCTTCGAGTTTGAGTTCGTGATCGGGTTGTGCGCAATCTGAATCGCTCCC
TGATTATCCTCGAAGATTTGAATGCACGGCATACCTGCATCTGGCAACAT
AAAACGCCAAACTTGCCTCAAGAAAAGCACCTCCTTCAAGACGTCGGCAA
TTGCCACATACTCTGCTTCCGTTGTGGAAAGCGTAACGCACTTCTGCGTC
CTCGAAAACCAAGTCACACACCCACCCCCACACATCACTAGTCCTCCTGA
AACCGACCTACGGTCTGCTGCCTTGCTCGCATAGTCAGCATCCACGAACA
CCTGCATGCTCATGCCAGTCACCACACCCCTCTCAAATGTAATCCCCATC
CAACTCGTCCTACGCACGTACCCTAAAATACCAAGTGCTGCCTTCCAGTG
CACCATCTTGGGAGACGCGCAATACCGCGCTACTGCTCGTACTGCATTCG
CGATGTCCGGCCTGGTTTGAGTGGCCAACCACATCAGGGATCCTACCAAC
TCGCGGAAAGGGACATCAGCACACGCTTCGTCCTCGTCAAAGTCGGTGAG
CTTCATGCTCACAGGCAAGGGCACACTCTTCCCCCACTCTACGCCGTACT
CTGCAGCCAACTCTTCTGCAAACCTTTGCTGCGAGATCCTCAAAAGGCCT
CTCTCTAGATCTCTCTGGTAAAAGCACGCGGAGTACCACCTCAACTCCCC
AAGGTTCTTCACGGGGACCATCTCGTTGAGGTCTCTGCCAAACTTGTCAC
ATCTCTCCTTCTGCCCTACGGCAAAAATGTCATCCACGTGGACCACGATG
ATCATGATCACACATCCATCCTCCATAAATCGAAAAACACATGCATCCGC
CAAACACTGCACAAATCCTAAAAGTAACAAACACCTCGTCAGGTGCGCAT
GCCATTGTCGTGACGCCTGCTTCAAACCGTACAGACTCTTGCATAGCTTC
ACGATCAGTCCAGATAACCTACCACAACCTTGCGGGAGACGCATGAAAAC
ATCCTCTTCAAGCTCAGACTGCACAAACGCCTGCTGAATATCGAAATGAC
ACAAGTCAAGGTTCTGCTCACATGCCAAAGCTGCCAACAAACGCACACTA
GACACGGATACGGTGGGTGCAAACAATTCTCCAAAATCAATCGAAGCCCT
CTGCATGTCCCCCCGCGCTACAAGTCTTGCCTTGAATTTCGTCGGCCATC
CGTACTCGTCTGCCTTACAGTTGAATACCCACTTGGCGTTGATGAAGTTT
TCTACTGGTTGCTACACCGGACTAAAAGTACCTGCATCCAACAGACCGAA
AAACTCCCGACCGACTGCATCATCCCACAACTCTGAATGTTGAGACCGCA
TGGCCTCCTTGAACGTTTTCGGCACGCGGAGGTCGCTGGCGAGGCAGTGA
GGGAGGTCCGGCATCTTGTCAGGAGGGCGCTTGCCACGAAGAGTGGCTTC
CACGTCCTCGCGGGTGGCGAACATTGCTGCGAACATGTGCAGGCCCCCCG
GCCCTCCAGCTCCTGCGGCCCCCCCGCTCCCATGGCCTGCTAAACTCGTA
TCTTGCGGCGGTGGGGGAGCGGGAGGGGCGATGCTGGCGGACGGTGGCAG
GTCTCGACGTCCTTGATCGACGGCCTCCCGGGTGGCGAGCGACGAGACGA
GCGCATCCTTGCCCATCATCGACAGCAGCCCAAGGCGGTGTTGGAGAGCG
GTGCCGCCACCTGACGGCGACGGCGGTTGCTGTTGCTCATCCATGAAGCG
CACTCGGTCGCCGCGCGTACGGCCATGCACTCTGGTTTCCTTCTCGCCCA
ATTCTCTGACCGCTCGCTGTGAAAGCGGCGGGTGAGCGGGAGCGGCGGCG
CTTGCGGGCGGGGGTGTCGGCGGTGGACGGGGCGGCGTGGCTGCGGTGGA
CGGCGGTGCACTCGAAGACGCCGTGGAGATCGGCGACGCGGCTCCGGACC
CTGTGAAGATCGACGGAGAAGTGGGCGGCGGCGAAGCGGTGGTCGCTGTG
GGCGGGGTGTAGGTGTACGTCCGCGATGCCCATGGCGGTGGCGGTGCGGC
AGCGGCTGCAGGAACGGCGGCGGCCGGCGAGGGCGCCGCGGTGACCGAAG
AGCCCCCCCCGCTGGCCGGTACCGGCGCCGGCACGGCGGTGCGGCGGTTG
ATCCACACGACGTTGTTGGACAGGCAGATCCTTCCGGTGTCGGCGCTATG
CACCCTACGCATCTCCTCCATGCTCACGCCTTCTTTCCCAACTGGAATTT
TTTCTTCAGTCAGTACTACGTCACGCACTCCTTCCTGGGCAAACATAGCT
ACCATGTTCGATCGAAAAATCAAAAACTTAGCCTGCTCATCCTCCCCTTG
CTTGAAAACACCATCCCAAGGCGCTAGGCGCTTAGTCTCAGTCATTCGAA
CCGTCCCTGCGTTAATGGGTACTCTACCCATGTCCCCTGATGAGACGTGA
AGTCGACCGGTGAGGGCGTCGGCGAGTGTGCGGGCGATTTCGTCGGTCGT
CGGGTTGGCCGATGGCCGCCCCGCGTGTTGCTGGTGGCGATCCTCGTGCT
CTCTTCCGGTCCGGACGTCATCTGTCCTCCGCTCCTCTGCTTCTTGCCTC
GACATATCGGCCAGTCTTGCTTCTACCCTCTGTTCGACCAAGTAGTTGAT
CCGGGCTTCCTCCTCTGCTAGTCGGGCGCTCACTCGATCTTGCTCGGTGT
CGCTCATCGGTGGCTGCTGCTGATCGCCGCAAAGCGATACTCCAAACTAA
GCTCGACTCGAATCTCGTAGACGACGTGTCATACGCTAGCGTGATCGATA
ATTCGGGTGGCTCAGTTGTGTGTGATGGGAGCGTAGAGCAGCTCGGCCAT
GACGGGCCGCACGGGTAGGTAAAGACGTGTAGACGTGGTGAAAAACGTGT
TGTATTCATCGGGGGCGTGCTTGAGCTCGTCATTCCATCACGGCATCAAG
TCACGCATAACGCTTTAATACCCAGAACGAATCTCCATGAATCTCCACCA
ATCTACTACACTCCCAAGGAAAACACAAAGAAACTTCTTGTCCCTCCGTA
GTTCGTCACTGCAATCCCCGCATATGTATACGCAATATACCACCCCCATG
CTATGCTACGAGTATATCGAATATCTTCGCCCAGTGAATCACTAAAACTC
ATTTGTTCGGGAATGCATTATGACTCATGACAGACAAGAGGACATGCAGA
CAAGCAACCGGATGGGCGAAGGACGGGAGTAAGAGGGGCAAGAGTAGGAG
GAAGGGGAGGCTTGAGTAGGTGGGGTCAGGATAGGACTCGGTGGCGACGT
CATTGCCTGGCACAACAGCCGAACCAAGTTTTTCGGATGTATAAGCTCGG
CCACCGTCTGCGATCTCCTGATCTCCCATCTTCACCATCATCAGTCGTGG
TATGCATATGCACATTTGTTTCTGTAGTCTCGACTAAAGGATGAATGCAC
AACTACAAAGGATGGACTGCACAACAACCTCATCAGCAGCAGTTCGGACT
ACATGGTGCAGTATCAGGTTCCTTCACAGCATGTGTTGTAATGAACGGTA
CGCTGCTGTGTACTATGTAGCAGGATTGATGGGTGTGATCCCTTCCAGTC
TTTTCCCAGACGATATGGCAGATACGAGACGTAAGCAACTGGCGAGGTGT
CAACCCCCCAACATCCGCCGAATCTGTGGGAAAATATAATATCCATCAGA
ACTGTTTCTTGAGGGATGCCGGCGGATATTTACGAAGCATTTAGTACAGT
AGCATTCTACCCATCAAAGCTGTTTCACACAAATTGTACATACCAACCCC
CCCTCTTTCTCTCGCTCTCTCTCTTTGTGTGTGTGTTTCGTGATCGTTGT
CACGAGACCCCCACACCACCCACATCCACAACCTACTCTTTCCTCCGTCA
TCGTTCAGCCGAACTCAAGACCCCCATCTTTCCACCACCCGTTGGTAAGG
GCGTGTGACATCTGGCCTTGCGGACGTGTGTTCATAAGTGTCGCTCTTCT
CGTGGCCGAAATGAACGACTCTATTTTACATCCCTGATGAGCGTTAGGCG
GTACTGATGCCAATGCTGTTGTGTCCGATCCTCTTCACGCTTCCGGACCC
TCCGGGCTTGTGGTTCCTGCTGATGGCGTGGTGTGTGTCACAGGCAACAG
GATGAAGGTGCTTTGGACCCTCCTTCTCGGCGCGGCTCCCGTCGCATTTG
CGGAAGATTCGACGGCGGCTGTATGGCTGGGCGACCACTCAATTCAGGTG
CGATACACGTGTTCTCGGCGTATGAGAGATACGAATAAGGACCCGGCAGA
GATGAAGCCTACAGTAGTCGTCATTCGCTTTCATGTATCATGTGTGTGTG
CTCGCCCGCGCGCGCGTGTGCGCTGATACAGACAGGCCAGCGTGCCGAAG
TTGCATCAAGAGCAGGACCCGCTTGTTTCCTCTGGTCCTGACGGTAGTTG
ACCGCGGAAACTGCAGGATTTTGGTTCGTTGATGGTCTCTTACATTGCTC
TACAGCATAGAATCGTTGATGGTCTCTTGCATCTCTCTACAGTAGTGGTT
TGTCTACATCATGAAAGACTACAGTACAGCATTACATCTACACTCGAGGT
GTTCTTCTCGTCGTACTTGATCACTTATCCGTAAGAGTCCTCCTGCCAGA
AGGCAGGCGACCCTTGATGTTTCTGCTCGCCTACAGTGCGGTCATTTCGG
CGACATGTCCTGGAAGCAGCACACAGTTGGCTCCTCTATGCATATAAATA
TACGAACGGCACGTACAAGAACAGAAAAGGTTACGTACTGTGGCAGTCGG
ACGCAAGTCAAAGGACGTGCTCCTGCCAATGCCGACAATACGCCGATACG
CCGATACTGCACGTTACATTTTAGCTCAAGTCCATAAACTCCAATGGGCT
ACGACAGGCTCCCACCCTGCGGTCCCCTTCCCCTCCCCCTTGATCTCTCA
GATTCGTCCCTTGTTTTGACATACGAATTAAGTAAGTACTACATGACTGT
TGTTGTGCAGGGCGAGGGGTTGGTCGCTGAGACAGGAAGCTCTCTCCAAC
GGAAAGTCTCCAAGAAAAATGAAGGCCCTTCACATCACGGCGCTCGCTCC
AGCCGCAAATCTCGCCCATGCCGCAAGCGCAACAACGACGGGGTCAAGGC
GGTACGTACATTGTGCACTCCAGACCAGGACGGCTTCGGACGAGCCCTAA
CAACCATTAGCGGGTGCGGCGTGTAGGTTGTGGCCACCGTATTACTTCCC
AATACTCACGCGAAGGGGTGTTTATTACTATGGGGCTCTTCGGTCTCCGA
TGTGACTGCTGTACGTTGTCAACTACTGAGAATGCGTTTCATTCCTCTTG
TGCATTGCAGTCCTGCTGCACGGGTTGTTCCTGCACCGCACGTGTTTCTA
TTCTTCGTGGAGTATCAGATAGTCGGTACTGTAGGTAACCTTCGCCGATA
AACGATTATTACTGTTTGGTTGTTCTTTTCCACTCGTGTTTTTTGGGGCG
TTTTGCACTACGACTGCTCTCCAGGAATTCTCCCTCGAGTACGAGCACAT
CGGATGCTTTGCTGACAACAAAACCGACCGGGTGCTCGGACACCTGATGA
AGTCACCTCTTATGACGAGCGCTGTGAGTGGCCCCCTTCGCGGCCTGGGG
TTGTCGGCGAAACCAGCCACATCCCATACAATTCGTATGGTTCAAAGTGC
GTATCCTGCAGCAGAATGAATGGCGGCATCAGACCCCGGCATCACTATTG
TTAGCCCCCGCCTCCTCAGGGGTTGGTGTGCTTGTCTGTTTCGTCATTGC
GACAGAGACGGCGCTACGTCGAGCAGGATGAAACTCTGCACGGTTGGTGT
CTGTACCGTGTCGGTTGGTTTCATTTGCATGGACTGCGAGGCCCTGAACT
TGGTTTCATTTGCATGGACTGCGCGCCTCTGACCCGCACAACGTGCTGAA
TTAACCTTCCTTCGGAGGACGGTTCGCCGCGCGGCACAACTAACCTGAAA
CAACCAGCCTCTTCGGTCTGTTTACTCAAAATGCAGCAGGCCACGGCGAG
CTGCGTCGTGTTCGTGTGGTCAGCGATGCGTGTTCAAATCCTTCCCCGCT
CCACACTCGCACATCCAGATGTGCGCCGAGCACTGCTTCGGAAGACGCGC
CACCTACATGGCCCTTCAGTACGGGTATGAATGCTGGTGCAGCCGGTACA
CGGAGCTTGACTATTCTCGCCACTCTGGGACGGACAAGGGCGACGCGGAC
CTATGCGATCTTAGCTGCTACGGATGTGACGTGAGTCATTTGCGAGAAAT
ACTCTAACGCGCTGGCGGGTATTTTAGACTCACGCTCCCATTTCCAAACC
ACTGTAGCGAGGATAACGAAATCATATGAAAAATATCAATGGAGCGAACT
ACTGTACACAGGCAGGCTTGGGTTAGCCGATTCCCCTAGTAAAAAAATGA
TACTACTCTCTGCTGCGACTCCTCGCTTGCTTTCGGCCCTATTGAATACT
TCCCCCGCAAGATTTCTGAATGTTTGGGGCCTTGGCTTGCGCGGCAGGGG
GGCGGGGTGGGAACAGGAGGACGTATTTGAGTCTCGTGGTATGCATTAGA
AAGGTTTGTCTAGAGGGTAGTTTCCCTTCGTACATGTCATTAATGTCCTC
ATTGATAAGCGCGTGGAGATAAGGTTGGCCAACCCATGCATGAACAAAGT
GGTTCCCGATTCGTACAATCTACAGATCACCGTTTTTCAACCCAACCCGA
TGTCACACTTCCTCTGCTCCCTCTCTGGTTTTCGTATCTCCCTTCCCCAT
TAGGCTGAGACTTGCGGAGGATTATATGCCTTCGGTAAGCCCCGTTACTC
TGTCGCTGCGTACTAATAATCGATGCTTTGATTATTTCAGACTTGTACAG
TAGTACACTCCTCTGGTCTTGAGGTTTCATTGGTTTGTGCGTTTTTCTTC
TTCCTTTCCGACGTCGAAAAATATCGGCGCAGGCGCGTGGTCGAACGAGG
CTGGAGCTAATTCAATGCAACACCATTCGTCATTGTGCACTTATCAAACC
GTTTTTCTGGTATACCACATGTACTCTCATTAACTGCTCGTTCGTTTCTG
TTCGTTTTTGGTCCAGACCTGTACAAACTCGACGGCCCAATGCCGTCCGA
CAGTCGCGAGTATGTAGGCTGCTTCGCAGATGACCAGGAGGACAGGGCAC
TGGCAAACAAGATAAAGTTCCAGGACAACATGACCCAGGACGTCTGCCGC
GTCTACTGTGAAAGGTTCGGCTCGAGCTTCTACGCCACTCAGGTGTGAGG
GATGTGTATAAGAAGCACACGCACGAACGCCAAGGGTTGTTGTTGCGTGC
ATTCACTCTCGTGTGCGTGCGTGTATACGCTTGGGCTGAGTGCATTCGGC
GCAGTCTTCCACTGAGTTGAGATGCAGCGCGCCGTGAGAATATCATCGCC
GTGTTCCTCTTGCGTCGCCCCCGGGAAGCATTTCACCAAGCAGCCGAAGC
GCGGTATTAAAACTTGGAATTCTTGTTGGTATCGGTGTCGGTGCTTGGTG
CAACGTCGTCCCTATAGCTGCTCTTCTCGGCTTTTCGCCCGCCTACTCCT
GCCGTCGCCTCACGTAACACGAAAAAGTACGGAGATGAGTGCTGGTGTGG
TGCGACCGACGACGTCGAGGAGTACAAACGGCACGGGGACGGCGAGTGCA
TCGCCGGCTGTTTCGGGGACCCGGCGATAGCTTGTGGTGAGCGACGAATT
AAAAGGGCGAGGGAAGAGACGGAAGCACGACACCCAGGGGCGGAATGACA
GGCATTAGGAAGAGAGCCGGAAAGGGAGGCAGAGAGAGCGAACGGTAGCC
TACCAGCCGGCCAGCCGGAGAGGGCATAGCGGTCCTCGAACCAATAGCGC
GGTAGGAGGACATTGTGAACCTTGATAAATATTCGATGAGCATCCCATTC
TGCACCCTCCTCCTCGTCCCCTTTTCTGCACAATGCATCCTATCAAAAAT
GCCACCCAGTCATTCCCTGCGCTCTCATGTAGGGTATCTCATCTACAAAC
ACGACCTACGTGTCACTGCGTACCTCAGCATTTCGAAAGGTTATGCATGC
AATTCCCGCTCGCCTTTACTTTTCCCAACAAAAATCGCGAACAGGATACT
TCCTCACTTATTCGGATTTCTTCACCGAAACACAGACTGTACTGTAGCCC
CCCCGTGCTCACCCCGATCGTCCCAGGCGGATACTATGCCTTTAGTCTGT
TCGAGTACTTGGACGACGACGACGACGAGACCGCCACCGAGTGCGCCGAC
GAGGGTAGCGACGACGACGACCACGGCGAAGACGCTTGGTATACCCCGTC
TCCGTCGACCGCCCGCACGGACAGCCCAGAATCTCCGACAACCTCGGAGA
TGCCCGGGTTCATGCCTATCGATGGTGATTTGCCGCTGTGTCAGAATTCT
GCAACCTTGGCTTGA
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Coding sequence (CDS) from alignment at chr_28:1856887..1872651-

>Ec-28_002060.1 ID=Ec-28_002060.1|Name=Ec-28_002060.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1740bp|location=Sequence derived from alignment at chr_28:1856887..1872651- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTTCCGTTTCGACGTTTCGACCTTCTTCACACATATCGCCCTACGTGT
TTTTTCACGACACAGAGAGCACGCCCCACACGCCCACACGCCACTCTCCC
CCCCTTCGTTTGGAAGACCGCTATACTTCCTACTTTCCGACGACCGACAG
GGTGAAGGGTTGAGGAATGGTCAGCAGGGCGCCCGAAACCCCGAGAGAAT
GAAGAAGGAGAAGAAGGTGGAAGCCAAGGCATCCACCGATCACGAGTACC
TCGGCTGCTACCGCTACAACAAGGACATTAGTAGCCTCCTGAAGAACGGG
AAATCGTTCTACGACAAGACGGATCAGGCCCTGTGCCGCGCCCACTGCGA
AGAGTACGATACAGCCTTCTATGCCATGGAGCACGGGGATATCTGCTGGT
GCCCTACTTCTCCCGACATCAACGACTACATCATAGACGATGTTGGTAAC
TGCGACAAGCCCTGCACTGGAGACCCGAGCATTTTTTGCGGCGGGGTCTT
CTCTATTAGCATGTTCGAGTACCAGGATGTCGGCAGCTCCACCGGCACGG
GCGAGTACGAGGAATACGAGAGCTCCAGCGGTACTGTCCAGGAAGACGAT
GACGACGGTTTCAGCAGCTCCACTGAATCGGTTTGCACCAACGGCGTCTC
CGGCATCGAGTCCGACGGTGTTTGCTGCGAGATCAGGATGAAGGTGCTTT
GGACCCTCCTTCTCGGCGCGGCTCCCGTCGCATTTGCGGAAGATTCGACG
GCGGCTGTATGGCTGGGCGACCACTCAATTCAGGGCGAGGGGTTGGTCGC
TGAGACAGGAAGCTCTCTCCAACGGAAAGTCTCCAAGAAAAATGAAGGCC
CTTCACATCACGGCGCTCGCTCCAGCCGCAAATCTCGCCCATGCCGCAAG
CGCAACAACGACGGGGTCAAGGCGGAATTCTCCCTCGAGTACGAGCACAT
CGGATGCTTTGCTGACAACAAAACCGACCGGGTGCTCGGACACCTGATGA
AGTCACCTCTTATGACGAGCGCTATGTGCGCCGAGCACTGCTTCGGAAGA
CGCGCCACCTACATGGCCCTTCAGTACGGGTATGAATGCTGGTGCAGCCG
GTACACGGAGCTTGACTATTCTCGCCACTCTGGGACGGACAAGGGCGACG
CGGACCTATGCGATCTTAGCTGCTACGGATGTGACGCTGAGACTTGCGGA
GGATTATATGCCTTCGACCTGTACAAACTCGACGGCCCAATGCCGTCCGA
CAGTCGCGAGTATGTAGGCTGCTTCGCAGATGACCAGGAGGACAGGGCAC
TGGCAAACAAGATAAAGTTCCAGGACAACATGACCCAGGACGTCTGCCGC
GTCTACTGTGAAAGGTTCGGCTCGAGCTTCTACGCCACTCAGTACGGAGA
TGAGTGCTGGTGTGGTGCGACCGACGACGTCGAGGAGTACAAACGGCACG
GGGACGGCGAGTGCATCGCCGGCTGTTTCGGGGACCCGGCGATAGCTTGT
GGCGGATACTATGCCTTTAGTCTGTTCGAGTACTTGGACGACGACGACGA
CGAGACCGCCACCGAGTGCGCCGACGAGGGTAGCGACGACGACGACCACG
GCGAAGACGCTTGGTATACCCCGTCTCCGTCGACCGCCCGCACGGACAGC
CCAGAATCTCCGACAACCTCGGAGATGCCCGGGTTCATGCCTATCGATGG
TGATTTGCCGCTGTGTCAGAATTCTGCAACCTTGGCTTGA
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Synonyms
The feature 'Ec-28_002060.1' has the following synonyms
Synonym
Esi0033_0074
Esi_0033_0074