Ec-28_000820.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-28_000820.1
Unique NameEc-28_000820.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length240
Homology
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BLAST of Ec-28_000820.1 vs. uniprot
Match: D7G9G4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G4_ECTSI)

HSP 1 Score: 437 bits (1123), Expect = 3.950e-153
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 3 
Query:  201 MLADMDSRAGFLRTAAAXXXXXXXXXXXXXSQPSSAAEVAATEFVDFEDSRGLFSCRIPKNFLRAERAKDKRGTVFVAGDYSKAEVLSVQVVKTFDLLTDAGLPTIGDLTKWENVGKPAAIADLLKQRRDSDAAGGTPVESVVLPGVTLDGDVLQFMLKSPIKVMRADLLEKEQGVSELYRNTYVKAIMRGDGSFLVVWAGALNTDWDQEGGAKDRLKVATDSFRLEGLIVDGVRLGAV 917
            MLADMDSRAGFLRTAAAXXXXXXXXXXXXXSQPSSAAEVAATEFVDFEDSRGLFSCRIPKNFLRAERAKDKRGTVFVAGDYSKAEVLSVQVVKTFDLLTDAGLPTIGDLTKWENVGKPAAIADLLKQRRDSDAAGGTPVESVVLPGVTLDGDVLQFMLKSPIKVMRADLLEKEQGVSELYRNTYVKAIMRGDGSFLVVWAGALNTDWDQEGGAKDRLKVATDSFRLEGLIVDGVRLGAV
Sbjct:    1 MLADMDSRAGFLRTAAAXXXXXXXXXXXXXSQPSSAAEVAATEFVDFEDSRGLFSCRIPKNFLRAERAKDKRGTVFVAGDYSKAEVLSVQVVKTFDLLTDAGLPTIGDLTKWENVGKPAAIADLLKQRRDSDAAGGTPVESVVLPGVTLDGDVLQFMLKSPIKVMRADLLEKEQGVSELYRNTYVKAIMRGDGSFLVVWAGALNTDWDQEGGAKDRLKVATDSFRLEGLIVDGVRLGAV 239
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BLAST of Ec-28_000820.1 vs. uniprot
Match: A0A6H5KHB6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHB6_9PHAE)

HSP 1 Score: 424 bits (1090), Expect = 4.140e-147
Identity = 232/239 (97.07%), Postives = 234/239 (97.91%), Query Frame = 3 
Query:  201 MLADMDSRAGFLRTAAAXXXXXXXXXXXXXSQPSSAAEVAATEFVDFEDSRGLFSCRIPKNFLRAERAKDKRGTVFVAGDYSKAEVLSVQVVKTFDLLTDAGLPTIGDLTKWENVGKPAAIADLLKQRRDSDAAGGTPVESVVLPGVTLDGDVLQFMLKSPIKVMRADLLEKEQGVSELYRNTYVKAIMRGDGSFLVVWAGALNTDWDQEGGAKDRLKVATDSFRLEGLIVDGVRLGAV 917
            MLADMDSRAGFLRTAA XXXXXXXXXXXXX  PSSAAEVAATEFVDFEDSRGLFSC IPKNFLRAERAKDKRGTVFVAGDYSKAEVLSVQVVK FDLLTDAGLPT+GDLTKWENVGKPAAIADLLKQRRDSDAAGGTPVESVVLPGVTLDGDVLQFMLKSPIKVMRADLLEKEQGVSELYRNTYVKAIMRGDGSFLVVWAGALNTDWDQEGGAKDRLKVATDSFRLEGLIV+GVRLGAV
Sbjct:   65 MLADMDSRAGFLRTAAXXXXXXXXXXXXXXXXPSSAAEVAATEFVDFEDSRGLFSCLIPKNFLRAERAKDKRGTVFVAGDYSKAEVLSVQVVKAFDLLTDAGLPTVGDLTKWENVGKPAAIADLLKQRRDSDAAGGTPVESVVLPGVTLDGDVLQFMLKSPIKVMRADLLEKEQGVSELYRNTYVKAIMRGDGSFLVVWAGALNTDWDQEGGAKDRLKVATDSFRLEGLIVEGVRLGAV 303
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BLAST of Ec-28_000820.1 vs. uniprot
Match: A0A835Z4Q3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4Q3_9STRA)

HSP 1 Score: 179 bits (453), Expect = 1.110e-51
Identity = 99/188 (52.66%), Postives = 122/188 (64.89%), Query Frame = 3 
Query:  339 FEDSRGLFSCRIPKNFLRAERAKDK--RGTVFVAGDYSKAEVLSVQVVKTFDLLTDAG-----LPTIGDLTKWENVGKPAAIADLLKQRRDSDAAGGTPVESVVLPG-VTLDGDVLQFMLKSPIKVMRADLLEKEQGVSELYRNTYVKAIMRGDGSFLVVWAGALNTDWDQEGGAKDRLKVATDSFRL 878
            + DSRG F   +P N++RAER  D+  +G +FV G+Y KA  LSV ++K+  LL DAG     LPT  DLT W  VG P  IA LL  RRD DAA     +S VLP  V LDG+ L FM+K+ + V R DLLEKE+GV ELYR TY KA+MRGDG+FL+ WAGALNT+W +   A+D L     SF L
Sbjct:   42 YSDSRGYFEISLPANWVRAERKGDQEAKGVLFVTGNYVKAITLSVAIIKSSQLLRDAGTAPLVLPT-DDLTTWAGVGTPMGIAKLLAFRRDQDAAQAAAQDSEVLPDTVVLDGNALTFMIKTRVPVQRPDLLEKERGVRELYRLTYGKALMRGDGTFLLCWAGALNTEWGEPTNARDTLAAVVASFHL 228
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BLAST of Ec-28_000820.1 vs. uniprot
Match: A0A7S0QY41_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QY41_9CRYP)

HSP 1 Score: 125 bits (315), Expect = 4.690e-31
Identity = 75/181 (41.44%), Postives = 100/181 (55.25%), Query Frame = 3 
Query:  297 PSSAAEVAATEFVDFEDSRGL---FSCRIPKNFLRAERAKDKRGTVFVAGDYSKAEVLSVQVVKTFDLLTDAGLPTIGDLTKWENVGKPAAIADLLKQRRDSDAAGGTPVESVVLPG-VTLDGDVLQFMLKSPIKVMRADLLEKEQGVSELYRNTYVKAIMRGDGSFLVVWAGALNTDWDQ 827
            P   A+    E+  F++  GL   F   IPK F +++R     GT+FVAG    AE++SVQ+V    LL D G+   GDL+ WE +G   AIADLL   RD DA     + S V P  V + G  L F   + I V R D L + QG+SEL R T  +A +R DG+ LV+WA AL  DW++
Sbjct:   59 PPDRADAEVYEYSAFKEDGGLDAVFRADIPKEFFKSKRPLTN-GTIFVAGSLQTAEIVSVQIVSIPQLLADIGVLPTGDLSTWEAIGSAKAIADLLTSNRDGDAKQRGGLASKVDPASVAVSGRTLSFRTAATIAVQRPDKLLETQGISELRRITRARAEIRRDGTALVLWASALEQDWNK 238
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BLAST of Ec-28_000820.1 vs. uniprot
Match: K0RXZ5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RXZ5_THAOC)

HSP 1 Score: 115 bits (287), Expect = 1.320e-26
Identity = 91/259 (35.14%), Postives = 128/259 (49.42%), Query Frame = 3 
Query:  150 CTAFSIQMETCAATATSMLADMDSRAGFLRTAAAXXXXXXXXXXXXXSQPSSAAEVAATEFVDFEDSRGLFSCRIPKNFLRAERA-----------KDKRG-TVFVAGDYSKAEVLSVQVVKTFDLLTDAGLPTIGDLTKWENVGKPAAIADLLKQRRDSDAAGGTPV-----ESVVLPGVTLDGDVLQFMLKSPIKVMRADLLEKEQGVSELYRNTYVKAIMRG-DGSFLVVWAGALNTDWDQEGGAKDRLKVATDSF 872
            C+AFS++ +T    AT + A      G  R   A             +    A +V    FVD  +   LF+  +P+ F    R+           K +RG T+F AGD SKAEV++V+      LL + G   +GDL+ +E +G P AIA LL +RR+ D  G   V     +SVV   VT DG  L+F +K  I V + +LL +E GVS L+R T  KA +   DG+ LVV+A AL+ D+    G    L+   DSF
Sbjct:   18 CSAFSLR-QTSPRAATELFAATSGPVG-RRAMVASTLSAAVSVAASKALAEEATDVPMKLFVDTANP-SLFAINVPQRFFAIRRSAKGDLPDEKTGKGRRGGTIFSAGDMSKAEVVAVERFPVKVLLEEEGYSPLGDLSTFEAIGDPTAIATLLLRRREKDRPGNVSVAVLDKDSVV---VTEDGKTLKFTMKQEISVQKPELLMEEMGVSRLFRTTVAKATLSSNDGNLLVVFASALDQDFSGPDGVA--LRKTVDSF 268
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BLAST of Ec-28_000820.1 vs. uniprot
Match: A0A7S2MYB7_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2MYB7_9EUKA)

HSP 1 Score: 81.3 bits (199), Expect = 2.380e-14
Identity = 60/199 (30.15%), Postives = 99/199 (49.75%), Query Frame = 3 
Query:  345 DSRGLFSCRIPKNFLRAERAKDKRGTVFVAGDYSKAEVLSVQVVKTFDLLTD-------AGLPTIGDLTK------WENVGKPAAIADLLKQRRDSDAAGGTPVESVVLPGVTLDGDVLQFMLKSPIKVMRADLLEKEQGVSELYRNTYVKAIMR----GDGS----FLVVWAGALNTDWDQEGGAKDRLKVATDSFRL 878
            D+   F+  IP +F+ ++R K   GT+FVAG++ +A V+SV       LL D        GLP    + +      + ++G   ++A LL + RD DA+ G    ++ L  ++ DG  L+F   + + V   D LE+++GV +L R T   +++     GDG+       VW  AL  DWD++   K  L+    SF +
Sbjct:   46 DAASRFALDIPDDFVVSKR-KAVTGTLFVAGNFPRASVISVTAWPLDALLQDDARSRALPGLPQELVIAEHATPLSFTDIGSAKSVAQLLLRARDRDASSGALQSALTLSQLSSDGSRLEFECATELPVSDPDALEEQRGVRQLIRRTRAASVLGSVPGGDGAPVPALFSVWGSALEQDWDKD--LKAPLEKTVSSFSV 241
The following BLAST results are available for this feature:
BLAST of Ec-28_000820.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G9G4_ECTSI3.950e-153100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KHB6_9PHAE4.140e-14797.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z4Q3_9STRA1.110e-5152.66Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0QY41_9CRYP4.690e-3141.44Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
K0RXZ5_THAOC1.320e-2635.14Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2MYB7_9EUKA2.380e-1430.15Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:788933..792437 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score437.2
Seed ortholog evalue5e-120
Seed eggNOG ortholog2880.D7G9G4
Length921
Hectar predicted targeting categoryother localisation
Gene idEc-28_000820.1
EggNOG OGs2CG9T@1,2S9FD@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_000820Ec-28_000820Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_28 788933..792437 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000820.1Ec-28_000820.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_28 788933..792236 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000820.1.5Ec-28_000820.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 788933..789051 -
Ec-28_000820.1.4Ec-28_000820.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 789376..789511 -
Ec-28_000820.1.3Ec-28_000820.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 790418..790578 -
Ec-28_000820.1.2Ec-28_000820.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 791406..791588 -
Ec-28_000820.1.1Ec-28_000820.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 792116..792437 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000820.1CDS:Ec-28_000820.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_28 788933..789051 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0008205UTR:Ec-28_000820.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_28 792237..792437 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-28_000820.1 ID=Ec-28_000820.1|Name=Ec-28_000820.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=240bp
MLADMDSRAGFLRTAAAAAIGGAALVVCGGSQPSSAAEVAATEFVDFEDS
RGLFSCRIPKNFLRAERAKDKRGTVFVAGDYSKAEVLSVQVVKTFDLLTD
AGLPTIGDLTKWENVGKPAAIADLLKQRRDSDAAGGTPVESVVLPGVTLD
GDVLQFMLKSPIKVMRADLLEKEQGVSELYRNTYVKAIMRGDGSFLVVWA
GALNTDWDQEGGAKDRLKVATDSFRLEGLIVDGVRLGAV*
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spliced messenger RNA

>Ec-28_000820.1 ID=Ec-28_000820.1|Name=Ec-28_000820.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=921bp|location=Sequence derived from alignment at chr_28:788933..792437- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
CGCAACGACATGGCTTTGGCGTCTTGTTTCCGCAGGGTACAGCCAACGAA
GAGCTCCTGCAAAGCGGTGGTTGTTCTGGCCTTGTGCTGCCGAGTGGTCG
CTCTAGCTCCATCTGCTTTTCATCCCACGAGAATAAATACCCCTTCAATT
GCACCGCTTTCAGCATACAAATGGAAACATGCGCAGCAACAGCAACCTCG
GATGTTGGCGGATATGGACAGCAGAGCGGGTTTCCTTCGAACAGCAGCAG
CGGCGGCAATAGGAGGGGCAGCGCTGGTGGTTTGTGGGGGATCGCAACCA
TCCTCGGCAGCGGAAGTTGCGGCAACCGAGTTCGTGGACTTCGAGGATTC
GCGCGGGCTGTTCAGCTGCCGCATCCCCAAGAACTTTCTGCGGGCAGAGC
GCGCCAAGGACAAACGGGGGACGGTATTCGTGGCCGGCGACTACAGCAAA
GCCGAAGTGTTGTCGGTCCAAGTGGTGAAGACCTTCGACCTTTTGACCGA
TGCAGGCCTGCCTACGATAGGAGACCTGACCAAGTGGGAGAACGTGGGCA
AGCCTGCGGCGATCGCGGATCTGCTCAAGCAGAGAAGGGATTCTGACGCG
GCGGGGGGAACTCCGGTGGAGAGCGTCGTCCTTCCCGGGGTGACACTGGA
TGGAGACGTTCTGCAGTTTATGCTCAAGTCGCCGATCAAGGTGATGCGGG
CCGACCTGTTGGAGAAGGAGCAAGGGGTGAGCGAGCTGTACCGGAACACG
TACGTCAAGGCCATCATGCGCGGCGACGGCAGCTTTCTCGTTGTCTGGGC
AGGCGCGCTGAACACGGATTGGGATCAAGAAGGGGGCGCTAAGGACCGCC
TGAAGGTGGCCACTGACTCCTTCCGACTGGAGGGCCTCATCGTTGATGGC
GTGCGTCTGGGGGCTGTGTGA
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protein sequence of Ec-28_000820.1

>Ec-28_000820.1 ID=Ec-28_000820.1|Name=Ec-28_000820.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=240bp
MLADMDSRAGFLRTAAAAAIGGAALVVCGGSQPSSAAEVAATEFVDFEDS
RGLFSCRIPKNFLRAERAKDKRGTVFVAGDYSKAEVLSVQVVKTFDLLTD
AGLPTIGDLTKWENVGKPAAIADLLKQRRDSDAAGGTPVESVVLPGVTLD
GDVLQFMLKSPIKVMRADLLEKEQGVSELYRNTYVKAIMRGDGSFLVVWA
GALNTDWDQEGGAKDRLKVATDSFRLEGLIVDGVRLGAV*
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mRNA from alignment at chr_28:788933..792437-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-28_000820.1 ID=Ec-28_000820.1|Name=Ec-28_000820.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3505bp|location=Sequence derived from alignment at chr_28:788933..792437- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CGCAACGACATGGCTTTGGCGTCTTGTTTCCGCAGGGTACAGCCAACGAA
GAGCTCCTGCAAAGCGGTGGTTGTTCTGGCCTTGTGCTGCCGAGTGGTCG
CTCTAGCTCCATCTGCTTTTCATCCCACGAGAATAAATACCCCTTCAATT
GCACCGCTTTCAGCATACAAATGGAAACATGCGCAGCAACAGCAACCTCG
GATGTTGGCGGATATGGACAGCAGAGCGGGTTTCCTTCGAACAGCAGCAG
CGGCGGCAATAGGAGGGGCAGCGCTGGTGGTTTGTGGGGGATCGCAACCA
TCCTCGGCAGCGGAAGTTGCGGGTACGTTTCAGTTGGAGGGGTACCGGTC
GACGTAAACGTTGCCTGAGATCACCACACAAACAGGCAGTTCAGTAGACG
GACTCTCTGCCGTGTCGTGGATAGAGATGCCCAGCGTCCAAATCTGTCGG
CGCACACCGAAAGGTAATGCCCGAGCCTATCTTCCATTGCAAACACGTGT
GGGTATCATATAAAATCCTGATTTTGCGGGGAAAAAAACTGCGAACGAAC
CCCAGGTGAAAAAAGACATCGCCTACATATGTACTGCTTCATGTACACAT
GAGGAAACACCGACTTGATGCAGTATCAACAAGTCGATCGTGGTCTTACC
TTCGGGACTTAACCCGACTGCTGTGTGAGGTACGTGACTTCCTCGTTGAA
CTTGGTGAAGGATCTCGACACGACCTATGCAACAACGGCGGATGGTGCTC
GTTGGCGGACGCACATTGTCTTGACTCGCCTGCTTCTTCCCATCCCTCGT
CATGTTACCCCCCCTCCGCGTCCTGTTGCTGCGTGTGCTTTTGTCGCAGC
AACCGAGTTCGTGGACTTCGAGGATTCGCGCGGGCTGTTCAGCTGCCGCA
TCCCCAAGAACTTTCTGCGGGCAGAGCGCGCCAAGGACAAACGGGGGACG
GTATTCGTGGCCGGCGACTACAGCAAAGCCGAAGTGTTGTCGGTCCAAGT
GGTGAAGACCTTCGACCTTTTGACCGATGCAGGTGAGGGGGTGGTCTTTG
TCGGTCGATCCTCGTGTGTATCTTCGCGTAGAGGTCAGCCTTGAGGGCGA
AAGCCTCGCACGATAAGGTTGTTTTCACGCGCGAGCTTCGGCCCCAAGAG
TCGGACGTAGATGAGCAAACGGTGGCAGTCGTGTACATCACCAAGACCAT
TTTATTGCACGCCCACGATAACCTCGAGCATGCATGCGTCTCGCGTGCAG
TGTTGCCGAACTCTGCGGCGCCCGCCGCCTTTGCCGGCACCTGCCACACC
CTTGGCGGAGATGCAGGCGAGGATTTGGGATTGTAACGCATGAGTGATTG
AGACCAGACGCTGCTTCCACGATATGCGGACGATGTGTTTCGCTGGGAAT
GAACCGCTGGTGTTCGGCCGTTCTACGCGGCACCACGTTTTGTGTTTCGC
GGGTAAACTACGCGGGGACTCAGGCAGCATAACACCTGACGAACTTCTGT
GTAATGGCCGTGGCGGCGGTACACCTGCGGAAGTTAGAGCGGGGGGCTGA
TGGGGTAGGCGGGATTCTGCGAGAGGGGTCGCAAGACGACACAGTCTCCA
GCGGAACCGTGGGGTTGTGGAGATCTGGCGGGAGAGCGTCTGGGCCGGAG
ACACCCGCATACTATTTCGTGTACGTCTACAGCAGTAGTAAAGCTTTCAA
TCCGTCACCGTCCGCGTTGATCGAGCCCCTTCAGCCCCGTCCAACCACGA
GCTCAGATTTTCATGCATACCTGCTTCACCTATCCAACATCGAGCTGAGA
TCTACATACCTTCTTTCCCCACCAGCAACGTTTGTGCGGTTCCGCCCCCG
CCTCAACAGGCCTGCCTACGATAGGAGACCTGACCAAGTGGGAGAACGTG
GGCAAGCCTGCGGCGATCGCGGATCTGCTCAAGCAGAGAAGGGATTCTGA
CGCGGCGGGGGGAACTCCGGTGGAGAGCGTCGTCCTTCCCGGGGTGACAC
TGGATGGAGACGTTCTGCAGGTCAGCCGGCCGAACTTGAGAAGAGAAAAA
GCTCGGGTGTTGTCAACGATTTTTGAGTCCGCACGGATGTAGAAGCGAGT
CTCGGCCTTTCGGGGGCGACTCGTGTATACGCATGGAAACACCGGCGTCT
ATGCGCAGGATGAATGTTCCCGTAAAATGAGCAGGAGCCGTTGTTGCCAC
ATGCAGTAGTCAGAGTCCGAAGAGGGCTACGCCGCTGAGGATTTTACATC
TTTACCTATTTTACCGTCGAGCCGTGGGTTTGATTCTTGCGAAAGATTTT
TTCTCGGGACGAACGGCACCGCAGGGTCGCCCGCGCAAGGCTTCCTGGTT
TTGTGTTCTGATGTCGATCAAGCGCACCCGCCGTGTTGTACACATTTTGC
CATGACCCTTGTGATGGCTCGTTTCCGAAGGAAAATCTGTCAGATGCGGC
AGGCAGTATTGCAACGTTCGGTCTCTTGTAGGTCCACCACCAGTAAGGCC
GATGCGAGTATCACCTAGACGCAACTCCTCCATGCCGAGAGTATACACGG
ACGGGGCATGCATGGGCACGTTGCGATTTTTCCCAGAAGCTCACGGGCCT
GTGCTTGAACGACGAGAGCGCGTGATTGGTCCTGCCAAGCGCAGGTAGGG
TCTCCTGTCGACTGACAACGAGCAACCGAGCTGTCGACTGCATTTGCGGG
CGTCGTGCATTTGCGGTGATACTGTACCTCACCCAACAAAAGCTGCCGAT
CGCGACCCCTCTCCTCTTACGTTCGGTTGTTTCTGGTATTCTGCAGGACT
CGTGCCGCTATAGCACTTCCTGCTGTCCTTTTTTGGTCCCTGTAAGCGTT
TTTTTTTATTTCTAACATTTGTTTCACTCCGAGGGACACGCGCGTGCTCT
TTGTGTTCGCATCGGTTCATCCGCAGTTTATGCTCAAGTCGCCGATCAAG
GTGATGCGGGCCGACCTGTTGGAGAAGGAGCAAGGGGTGAGCGAGCTGTA
CCGGAACACGTACGTCAAGGCCATCATGCGCGGCGACGGCAGCTTTCTCG
TTGTCTGGGCAGGTGCGTTTGCGACCAGCAGTTCGTCTTTCGTCGAGGTC
CCCGTGTACCACCGTGTGAAGCATGTTCTTTGGAGCGAATTCGAAGAAGC
GTGTCTGTCCCTGTTGCACCAACTTCACGGACATTGTTGTGGTGGGTCGA
CCTTTGTAGAAGACGGTGCGACTGCGTTGACTACCGCCCCCCCAGACCGC
GAAGAACAAGTCTCATCGCACCAAGAGAAGCTTTCATCGCACCGGTTCCT
GCAACGCATCTCCATCCTTGCCCTATTTGAACGCCTTACGCCCGATGTGC
TTCGCTTGCTGCTGTTACGTGGGCCTGATCATTCAGGCGCGCTGAACACG
GATTGGGATCAAGAAGGGGGCGCTAAGGACCGCCTGAAGGTGGCCACTGA
CTCCTTCCGACTGGAGGGCCTCATCGTTGATGGCGTGCGTCTGGGGGCTG
TGTGA
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Coding sequence (CDS) from alignment at chr_28:788933..792437-

>Ec-28_000820.1 ID=Ec-28_000820.1|Name=Ec-28_000820.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=720bp|location=Sequence derived from alignment at chr_28:788933..792437- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTTGGCGGATATGGACAGCAGAGCGGGTTTCCTTCGAACAGCAGCAGC
GGCGGCAATAGGAGGGGCAGCGCTGGTGGTTTGTGGGGGATCGCAACCAT
CCTCGGCAGCGGAAGTTGCGGCAACCGAGTTCGTGGACTTCGAGGATTCG
CGCGGGCTGTTCAGCTGCCGCATCCCCAAGAACTTTCTGCGGGCAGAGCG
CGCCAAGGACAAACGGGGGACGGTATTCGTGGCCGGCGACTACAGCAAAG
CCGAAGTGTTGTCGGTCCAAGTGGTGAAGACCTTCGACCTTTTGACCGAT
GCAGGCCTGCCTACGATAGGAGACCTGACCAAGTGGGAGAACGTGGGCAA
GCCTGCGGCGATCGCGGATCTGCTCAAGCAGAGAAGGGATTCTGACGCGG
CGGGGGGAACTCCGGTGGAGAGCGTCGTCCTTCCCGGGGTGACACTGGAT
GGAGACGTTCTGCAGTTTATGCTCAAGTCGCCGATCAAGGTGATGCGGGC
CGACCTGTTGGAGAAGGAGCAAGGGGTGAGCGAGCTGTACCGGAACACGT
ACGTCAAGGCCATCATGCGCGGCGACGGCAGCTTTCTCGTTGTCTGGGCA
GGCGCGCTGAACACGGATTGGGATCAAGAAGGGGGCGCTAAGGACCGCCT
GAAGGTGGCCACTGACTCCTTCCGACTGGAGGGCCTCATCGTTGATGGCG
TGCGTCTGGGGGCTGTGTGA
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Synonyms
The feature 'Ec-28_000820.1' has the following synonyms
Synonym
Esi0098_0050
Esi_0098_0050