Ec-28_000790.3 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-28_000790.3
Unique NameEc-28_000790.3
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length145
Homology
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BLAST of Ec-28_000790.3 vs. uniprot
Match: D7G9F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9F9_ECTSI)

HSP 1 Score: 790 bits (2040), Expect = 2.540e-277
Identity = 465/465 (100.00%), Postives = 465/465 (100.00%), Query Frame = 1 
Query:   76 MFSSSVIRRGRCSLARPPAATRCKVIVVDRGQPQTSRKGQQHAAIHRCPAGAAATAPPARGGGAPSGEAAAGKVQGSIASCCGTKHNLVLGPGIKQHQYFLSETTGGTVNWRRHASTLSRGDNCCLSLRPGAASSALRSRSLQTGGPALQLDRRGFSAGQGPDSDHDGGYEYXXXXXXXXXXXXXXXXSTLFGASSGAKTAAKTEEAGALTAVKEPPAKKNTKPRIPRNRRGGKGERNPSPTEAVQAVAVADGDAGTPAPSPEASEAPPKKAPKAKTPRKRRGNQVKRNPSPTAAAQAXXXXDGEEAGTTATEAAADPXXXNKAPKAKAPRKRRGGQGESSRSPNAGPKDAERKGAAANAAEAGTDPRVPKERKASFERARRAGVARRIEEGGGVPRDSDSGSGXXXXXEADSXXXXXEGSVPDESPFPWKEAETPPFTWQDPDAPVVPKPFLGGSGADGEKGGA 1470
            MFSSSVIRRGRCSLARPPAATRCKVIVVDRGQPQTSRKGQQHAAIHRCPAGAAATAPPARGGGAPSGEAAAGKVQGSIASCCGTKHNLVLGPGIKQHQYFLSETTGGTVNWRRHASTLSRGDNCCLSLRPGAASSALRSRSLQTGGPALQLDRRGFSAGQGPDSDHDGGYEYXXXXXXXXXXXXXXXXSTLFGASSGAKTAAKTEEAGALTAVKEPPAKKNTKPRIPRNRRGGKGERNPSPTEAVQAVAVADGDAGTPAPSPEASEAPPKKAPKAKTPRKRRGNQVKRNPSPTAAAQAXXXXDGEEAGTTATEAAADPXXXNKAPKAKAPRKRRGGQGESSRSPNAGPKDAERKGAAANAAEAGTDPRVPKERKASFERARRAGVARRIEEGGGVPRDSDSGSGXXXXXEADSXXXXXEGSVPDESPFPWKEAETPPFTWQDPDAPVVPKPFLGGSGADGEKGGA
Sbjct:    1 MFSSSVIRRGRCSLARPPAATRCKVIVVDRGQPQTSRKGQQHAAIHRCPAGAAATAPPARGGGAPSGEAAAGKVQGSIASCCGTKHNLVLGPGIKQHQYFLSETTGGTVNWRRHASTLSRGDNCCLSLRPGAASSALRSRSLQTGGPALQLDRRGFSAGQGPDSDHDGGYEYXXXXXXXXXXXXXXXXSTLFGASSGAKTAAKTEEAGALTAVKEPPAKKNTKPRIPRNRRGGKGERNPSPTEAVQAVAVADGDAGTPAPSPEASEAPPKKAPKAKTPRKRRGNQVKRNPSPTAAAQAXXXXDGEEAGTTATEAAADPXXXNKAPKAKAPRKRRGGQGESSRSPNAGPKDAERKGAAANAAEAGTDPRVPKERKASFERARRAGVARRIEEGGGVPRDSDSGSGXXXXXEADSXXXXXEGSVPDESPFPWKEAETPPFTWQDPDAPVVPKPFLGGSGADGEKGGA 465
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BLAST of Ec-28_000790.3 vs. uniprot
Match: A0A6H5KDW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDW4_9PHAE)

HSP 1 Score: 642 bits (1655), Expect = 5.490e-219
Identity = 390/467 (83.51%), Postives = 406/467 (86.94%), Query Frame = 1 
Query:   76 MFSSSVIRRGRCSLARPPAATRCKVIVVDRGQPQTSRKGQQHAAIHRCPAGAAATAPPARGGGAPSGEAAAGKVQGSIASCCGTKHNLVLGPGIKQHQYFLSETTGGTVNWRRHASTLSRGDNCCLSLRPGAASSALRSRSLQTGGPALQLDRRGFSAGQGPDSDHDGGYEYXXXXXXXXXXXXXXXXSTLFGASSGAKTAAKTEEAGALTAVKEPPAKKNTKPRIPRNRRGGKGERNPSPTEAVQAVAVADGDAGTPAPSPEASEAPPKKAPKAKTPRKRRGNQVKRNPSPTAAAQAXXXXDGEEAGTTATEAAADPXXXNKAPKAKAPRKRRGGQGESSRSPNAGPKDAERKGAAANAAEAGTDPRVPKERKASFERARRAGVARRIEEGGGVPRDSDSGSGXXXXXEADSXXXXXEGSVPDESPFPWKEAETPPFTWQDPDAPVVPKPFLGGSGADGEKGGAAA 1476
            MFSSSVIRRGRCSLARPPAATRC  IVVDRGQPQTSRKGQQHAAIHRC AGAAATA PARGGG  SGE AAGKVQ SI SCCGTKHNLVL  G +QHQ FLSET+GGTVNWRRHASTLSRG+  CLSLRPGAASSALRSR+LQ GGPAL+LDRRGFSAGQGPDS        XXXXXXXXXXXXXXXXSTLFGAS GA+T AKT+EAGA  AVKEPPAK+NTKPRIPRNRRGGKGERNPSPTEA QAVA ADG+AGTPAPSPEAS AP K+APKAKTPRKRR NQ KR+PSP AAAQA    DGEE GT ATEAAA+P   NKAPKAKAPRKRRGGQ ES+RSPNAGP DAERK AAA+AAE GTDPRVP+ERKASFERARRAGVARRIE+GGGVPRDSDSGSG     EADSXXXXX       SPFPWKEAETPPFTWQDPDAPVVPKPFL GSGADGEKGGAAA
Sbjct:    1 MFSSSVIRRGRCSLARPPAATRCNAIVVDRGQPQTSRKGQQHAAIHRCLAGAAATASPARGGGVASGEEAAGKVQASITSCCGTKHNLVLRLGNEQHQSFLSETSGGTVNWRRHASTLSRGEYYCLSLRPGAASSALRSRALQAGGPALRLDRRGFSAGQGPDSXXXXXXXXXXXXXXXXXXXXXXXXSTLFGASRGAETVAKTKEAGAPAAVKEPPAKRNTKPRIPRNRRGGKGERNPSPTEAAQAVAEADGEAGTPAPSPEASGAPLKRAPKAKTPRKRRANQGKRDPSPAAAAQAVEAADGEEVGTAATEAAAEPPAGNKAPKAKAPRKRRGGQSESARSPNAGPTDAERKRAAADAAEEGTDPRVPEERKASFERARRAGVARRIEDGGGVPRDSDSGSGSGS--EADSXXXXXXXXXXXXSPFPWKEAETPPFTWQDPDAPVVPKPFLAGSGADGEKGGAAA 465
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BLAST of Ec-28_000790.3 vs. uniprot
Match: A0A0G4J5N5_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J5N5_PLABS)

HSP 1 Score: 84.0 bits (206), Expect = 5.530e-14
Identity = 56/160 (35.00%), Postives = 83/160 (51.88%), Query Frame = 2 
Query: 1580 PSAGCLVADLKYKRVYVSSLEALEKVRVWEEARTLRPVHAAEIFEGKAIEAQKLEVRRVKEDGKEEKDENLVAKGMPGVISLYRRPLLPLTKRNQQYVLGVVDGQHRLRALKMLADAKMWDHSERNVVVEVFDAKDERDIEELYAEINRAEPVQIDLDIP 2059
            P  G +  D+ YKRV+ +S+ AL+ + VW   RTL    A EI       +Q L+ R                  +PGVI+L+ +             LGVVDGQHRL A+++L     WD    N+ V++F   D+ DI +L+++INRAEPV + +D+P
Sbjct:   47 PVLGDVARDVTYKRVFFTSISALQGIPVWNRQRTLSQERAVEI-------SQHLKQRP----------------RLPGVITLFEK-----VSSKGVPELGVVDGQHRLAAVQLLVRQGAWDAHNANIAVDLFRVGDDNDIADLFSDINRAEPVLL-VDLP 177
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BLAST of Ec-28_000790.3 vs. uniprot
Match: W7TLW5_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLW5_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 2.500e-10
Identity = 52/168 (30.95%), Postives = 82/168 (48.81%), Query Frame = 2 
Query: 1580 PSAGCLVADLKYKRVYVSSLEALEKVRVWEEARTLRPVHA--------AEIFEGKAIEAQKLEVRRVKEDGKEEKDENLVAKGMPGVISLYRRPLLPLTKRNQQYVLGVVDGQHRLRALKMLADAKMWDHSERNVVVEVFDAKDERDIEELYAEINRAEPVQIDLDIP 2059
            P  G LV DL YK++Y +S++ L  + +WE+ R  R   A        A++ EGKA+                          +PG +++Y               +G++DGQHRL ALK+L D+ +       ++VEVF  K + D++ L+ EIN A+PV I +D+P
Sbjct:  108 PVFGELVKDLTYKKIYCTSVQKLASIPIWEQQRIYRAERAQLLANDIKAKLQEGKALT-------------------------LPGSLTVYE----------MGEEIGLLDGQHRLGALKLLMDSGVLIPEAHLILVEVFPVKAQEDVKRLFTEINTAQPVSI-IDMP 239
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BLAST of Ec-28_000790.3 vs. uniprot
Match: A0A4D9DI08_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DI08_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 3.980e-10
Identity = 54/160 (33.75%), Postives = 82/160 (51.25%), Query Frame = 2 
Query: 1580 PSAGCLVADLKYKRVYVSSLEALEKVRVWEEARTLRPVHAAEIFEGKAIEAQKLEVRRVKEDGKEEKDENLVAKGMPGVISLYRRPLLPLTKRNQQYVLGVVDGQHRLRALKMLADAKMWDHSERNVVVEVFDAKDERDIEELYAEINRAEPVQIDLDIP 2059
            P  G L+AD+ YK+VY +++  L  V +WE+ R LR   A  I   K    Q   V+                  +PG+I+LY+         ++QY L  +DGQHRL ALK+LAD+ +        ++EVF  + E +   L+ EIN A PV++ +D+P
Sbjct:   40 PVLGQLIADMGYKKVYCATINQLADVPIWEKQRILRRERAESIAREKM--RQSFPVK------------------LPGIITLYQLA-------DKQYKL--LDGQHRLAALKILADSGIISKDNNFCLLEVFTLEKESEARALFLEINSAMPVKL-IDLP 169
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BLAST of Ec-28_000790.3 vs. uniprot
Match: W7TKX0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKX0_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 8.380e-10
Identity = 54/160 (33.75%), Postives = 82/160 (51.25%), Query Frame = 2 
Query: 1580 PSAGCLVADLKYKRVYVSSLEALEKVRVWEEARTLRPVHAAEIFEGKAIEAQKLEVRRVKEDGKEEKDENLVAKGMPGVISLYRRPLLPLTKRNQQYVLGVVDGQHRLRALKMLADAKMWDHSERNVVVEVFDAKDERDIEELYAEINRAEPVQIDLDIP 2059
            P  G L+AD+ YK+VY +++  L  V +WE+ R LR   A  I   K    Q   V+                  +PG+I+LY+         ++QY L  +DGQHRL ALK+LAD+ +        ++EVF  + E +   L+ EIN A PV++ +D+P
Sbjct:  115 PVLGQLIADMGYKKVYCATINQLADVPIWEKQRILRRERAESIAREKM--RQSFPVK------------------LPGIITLYQLA-------DKQYKL--LDGQHRLAALKILADSGIISKDNNFCLLEVFTLEKESEARALFLEINSAMPVKL-IDLP 244
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BLAST of Ec-28_000790.3 vs. uniprot
Match: A0A7S2AIA4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AIA4_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 6.850e-7
Identity = 48/168 (28.57%), Postives = 82/168 (48.81%), Query Frame = 2 
Query: 1580 PSAGCLVADLKYKRVYVSSLEALEKVRVWEEARTLRPVHAAEIFEGKAIEAQKLEVRRVKEDGKEEKDENLVAKGMPGVISLYRRP--------------LLPLTKRNQQYVLGVVDGQHRLRALKMLADAKMWDHSERNVVVEVFDAKDERDIEELYAEINRAEPVQ 2041
            P  G L+ DL+YKR+Y   + AL ++ VW+  R  +   +                 R+ +D K  K+  ++   +PG+I++Y +               L  L K  +++  G++DGQHR+ ALK L D   +    + V +EV   + E  + +L+ +IN+AEPVQ
Sbjct:  197 PILGKLICDLEYKRLYTIEIPALTRIPVWDNNRHYKQERS----------------HRIAKDLKANKNRRII---LPGLITIYEKEWEKQAVPTTALLDNLEELQKARKRF--GILDGQHRVGALKKLHDDGDY---LKPVEIEVIRLEGEEQVRDLFNDINKAEPVQ 340
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BLAST of Ec-28_000790.3 vs. uniprot
Match: A0A7S0T5L6_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0T5L6_9CHLO)

HSP 1 Score: 59.3 bits (142), Expect = 1.150e-5
Identity = 52/172 (30.23%), Postives = 85/172 (49.42%), Query Frame = 2 
Query: 1580 PSAGCLVADLKYKRVYVSS---LEALEKVRVWEEARTLRPVHAAEIFEGKAIEAQKLEVRRVKEDGKEEKDENLVAKGMPGVISLYRRPLLPL--------TKRNQQYVLGVVDGQHRLRALKMLADAKMWDHSERNVVVEVFDAKDERDIEELYAEINRAEPVQIDLDIPG 2062
            P  G L+ D  YK+VY      L + +KV V+E+ R  R   A  I   K+ EA                     +  +PGVIS+    ++P+        +  + +  + ++DGQHR+ ALK+L   K+    ++ V+VEVF   DE+   +L+ EIN A+P++  +D+PG
Sbjct:   59 PVFGTLLHDFGYKKVYAMPAVHLVSKDKVMVYEQQRAFRAERAEVIAAEKSKEA---------------------SFSIPGVISI-AEGIVPVKAEAGGAESGESARRTVSILDGQHRVGALKILLKNKVLTKGDQ-VLVEVFPDVDEKRAVDLFMEINSAQPIRF-VDLPG 206
The following BLAST results are available for this feature:
BLAST of Ec-28_000790.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7G9F9_ECTSI2.540e-277100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KDW4_9PHAE5.490e-21983.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0G4J5N5_PLABS5.530e-1435.00Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
W7TLW5_9STRA2.500e-1030.95Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A4D9DI08_9STRA3.980e-1033.75Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TKX0_9STRA8.380e-1033.75Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A7S2AIA4_9STRA6.850e-728.57Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S0T5L6_9CHLO1.150e-530.23Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:755789..763030 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length2346
Hectar predicted targeting categoryother localisation
Gene idEc-28_000790.3
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_000790Ec-28_000790Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_28 755789..763030 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000790.3Ec-28_000790.3Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_28 759125..760630 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000790.3.8Ec-28_000790.3.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 755789..755803 -
Ec-28_000790.3.7Ec-28_000790.3.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 756408..756551 -
Ec-28_000790.3.6Ec-28_000790.3.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 757217..757288 -
Ec-28_000790.3.5Ec-28_000790.3.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 758099..758186 -
Ec-28_000790.3.4Ec-28_000790.3.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 759125..759303 -
Ec-28_000790.3.3Ec-28_000790.3.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 759813..759866 -
Ec-28_000790.3.2Ec-28_000790.3.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 760429..760710 -
Ec-28_000790.3.1Ec-28_000790.3.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 761519..763030 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0007903UTR:Ec-28_000790.3Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_28 755789..755803 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000790.3CDS:Ec-28_000790.3Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_28 759125..759303 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0007905UTR:Ec-28_000790.3Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_28 760631..760710 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-28_000790.3 ID=Ec-28_000790.3|Name=Ec-28_000790.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=145bp
MLGGRPQVQARVRVVLGGPGEGAGVGGGADSAAGARGRDLRGQGDRGAEA
RGQAGQGGRQRREGRESGGEGHAWSDISLPTAALAADEEKSAVRLGGRRW
AAPPTGAEDAGGREDVGPLGAERGGRGVRRQGREGHRRAVRGNQ*
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spliced messenger RNA

>Ec-28_000790.3 ID=Ec-28_000790.3|Name=Ec-28_000790.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2346bp|location=Sequence derived from alignment at chr_28:755789..763030- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ACCCTGTCTGATGATCTCTCTGGCAGGCAGAGTCAACGTAACGACAGACA
GGCGAGAGCAACTCGTGAAGAGGAGATGTTCTCCTCCAGCGTCATCCGAC
GGGGACGCTGCTCCCTGGCCAGGCCACCCGCTGCAACGCGTTGCAAAGTG
ATAGTAGTAGACCGAGGTCAACCACAGACCAGCAGGAAAGGTCAACAACA
TGCGGCGATCCATCGGTGTCCCGCAGGTGCAGCCGCAACAGCACCGCCAG
CTAGAGGCGGAGGGGCACCGTCTGGAGAAGCAGCGGCGGGAAAGGTACAG
GGAAGCATCGCTAGTTGCTGCGGGACGAAACACAATCTAGTGCTTGGGCC
GGGGATTAAGCAGCATCAATATTTTCTGTCGGAGACCACCGGCGGGACTG
TCAACTGGCGACGGCACGCATCGACGCTGAGTCGGGGCGACAACTGCTGT
CTCTCGCTGCGACCAGGGGCCGCTTCGTCTGCGTTGCGCAGCCGATCCTT
GCAGACTGGTGGGCCCGCTCTTCAGCTAGATAGGCGTGGTTTCTCAGCTG
GACAAGGGCCCGACAGCGATCACGATGGCGGTTACGAATATGACTACAGC
AGCGGCGACAGCGGCAGCGACAGTGAGTGCGAGTCTGAGAGTACGCTTTT
CGGGGCTAGCAGCGGGGCAAAAACGGCGGCGAAGACCGAGGAGGCAGGGG
CACTGACAGCGGTGAAAGAACCACCGGCGAAGAAGAACACGAAGCCCAGA
ATACCGCGCAACAGACGCGGTGGGAAAGGCGAGAGGAACCCCTCTCCGAC
AGAAGCCGTTCAAGCGGTAGCAGTAGCGGATGGGGATGCAGGAACACCGG
CACCGTCACCCGAGGCCTCAGAAGCACCGCCAAAGAAGGCCCCAAAGGCC
AAAACCCCGCGCAAAAGACGTGGCAACCAAGTCAAGAGGAACCCCTCTCC
GACAGCAGCCGCTCAAGCGGCAGAAGCAGCGGACGGGGAAGAAGCAGGAA
CAACAGCAACCGAGGCCGCAGCAGACCCACCGGCAGCGAACAAGGCCCCG
AAGGCCAAAGCCCCGCGCAAGCGACGTGGCGGCCAAGGCGAAAGCTCCCG
CTCTCCGAACGCTGGACCCAAAGATGCAGAGAGAAAAGGTGCCGCAGCAA
ATGCGGCGGAGGCAGGAACGGACCCGAGAGTCCCCAAGGAGAGGAAGGCG
TCGTTCGAGCGCGCGCGACGTGCGGGCGTAGCCCGAAGAATCGAAGAGGG
AGGGGGCGTTCCGCGGGATAGTGATAGCGGTAGCGGCAGCGGTAGCGGCA
GCGAGGCCGACTCGGGCGGCGAGGGAGACGAGGGCAGCGTCCCCGACGAG
TCGCCCTTTCCGTGGAAGGAGGCAGAAACGCCTCCTTTCACCTGGCAGGA
CCCGGATGCCCCCGTCGTTCCCAAGCCTTTCCTGGGGGGAAGCGGCGCCG
ACGGCGAGAAGGGCGGGGCGGCGGCGGGCGCGGAAGCGAAGAGCACCGGG
GGCGGTGGCAAGTCTACACGAAGAAGAGGTCAGCGCAAGAAGACCCAACA
GCAGCAGCTGCAGCTGCAGCAGGAAGAGCACCCAGTGCTGGGATGCTTGG
TGGCCGACCTCAAGTACAAGCGCGTGTACGTGTCGTCCTTGGAGGCCCTG
GAGAAGGTGCGGGTGTGGGAGGAGGCGCGGACTCTGCGGCCGGTGCACGC
GGCCGAGATCTTCGAGGGCAAGGCGATCGAGGCGCAGAAGCTCGAGGTCA
GGCGGGTCAAGGAGGACGGCAAAGAAGAGAAGGACGAGAATCTGGTGGCG
AAGGGCATGCCTGGAGTGATATCTCTCTACCGACGGCCGCTCTTGCCGCT
GACGAAGAGAAATCAGCAGTACGTCTTGGGGGTCGTCGATGGGCAGCACC
GCCTACGGGCGCTGAAGATGCTGGCGGACGCGAAGATGTGGGACCACTCG
GAGCGGAACGTGGTGGTAGAGGTGTTCGACGCCAAGGACGAGAGGGACAT
CGAAGAGCTGTACGCGGAAATCAATAGGGCGGAGCCGGTTCAAATCGATC
TAGACATACCAGGGCCGCAAGAGGTGTACAAGTGCGCCGAGGAGGTTGTC
CTTCACTTGTACAAGCAATTCCGGCCCATGTTTGGGGGCAAGAGGGTCCG
CCCGCCGACCCTGAACGCCATTGTCTTCCGTGAGAACTTGATAAGAACCG
GGTTGATCGAGCGGCACGAGCTGTTCACCCCCCACCTTCTCCTCGACTTC
CTGCTGAGGGTGAACGAGATGATGTCCAGGCGGGACGTGCAGACGTGGGC
GCTCATGGTCGGCGACGAGGAGGGCTGCTATTACCAGAACTCGTGA
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protein sequence of Ec-28_000790.3

>Ec-28_000790.3 ID=Ec-28_000790.3|Name=Ec-28_000790.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=145bp
MLGGRPQVQARVRVVLGGPGEGAGVGGGADSAAGARGRDLRGQGDRGAEA
RGQAGQGGRQRREGRESGGEGHAWSDISLPTAALAADEEKSAVRLGGRRW
AAPPTGAEDAGGREDVGPLGAERGGRGVRRQGREGHRRAVRGNQ*
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mRNA from alignment at chr_28:755789..763030-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-28_000790.3 ID=Ec-28_000790.3|Name=Ec-28_000790.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=7242bp|location=Sequence derived from alignment at chr_28:755789..763030- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ACCCTGTCTGATGATCTCTCTGGCAGGCAGAGTCAACGTAACGACAGACA
GGCGAGAGCAACTCGTGAAGAGGAGATGTTCTCCTCCAGCGTCATCCGAC
GGGGACGCTGCTCCCTGGCCAGGCCACCCGCTGCAACGCGTTGCAAAGTG
ATAGTAGTAGACCGAGGTCAACCACAGACCAGCAGGAAAGGTCAACAACA
TGCGGCGATCCATCGGTGTCCCGCAGGTGCAGCCGCAACAGCACCGCCAG
CTAGAGGCGGAGGGGCACCGTCTGGAGAAGCAGCGGCGGGAAAGGTACAG
GGAAGCATCGCTAGTTGCTGCGGGACGAAACACAATCTAGTGCTTGGGCC
GGGGATTAAGCAGCATCAATATTTTCTGTCGGAGACCACCGGCGGGACTG
TCAACTGGCGACGGCACGCATCGACGCTGAGTCGGGGCGACAACTGCTGT
CTCTCGCTGCGACCAGGGGCCGCTTCGTCTGCGTTGCGCAGCCGATCCTT
GCAGACTGGTGGGCCCGCTCTTCAGCTAGATAGGCGTGGTTTCTCAGCTG
GACAAGGGCCCGACAGCGATCACGATGGCGGTTACGAATATGACTACAGC
AGCGGCGACAGCGGCAGCGACAGTGAGTGCGAGTCTGAGAGTACGCTTTT
CGGGGCTAGCAGCGGGGCAAAAACGGCGGCGAAGACCGAGGAGGCAGGGG
CACTGACAGCGGTGAAAGAACCACCGGCGAAGAAGAACACGAAGCCCAGA
ATACCGCGCAACAGACGCGGTGGGAAAGGCGAGAGGAACCCCTCTCCGAC
AGAAGCCGTTCAAGCGGTAGCAGTAGCGGATGGGGATGCAGGAACACCGG
CACCGTCACCCGAGGCCTCAGAAGCACCGCCAAAGAAGGCCCCAAAGGCC
AAAACCCCGCGCAAAAGACGTGGCAACCAAGTCAAGAGGAACCCCTCTCC
GACAGCAGCCGCTCAAGCGGCAGAAGCAGCGGACGGGGAAGAAGCAGGAA
CAACAGCAACCGAGGCCGCAGCAGACCCACCGGCAGCGAACAAGGCCCCG
AAGGCCAAAGCCCCGCGCAAGCGACGTGGCGGCCAAGGCGAAAGCTCCCG
CTCTCCGAACGCTGGACCCAAAGATGCAGAGAGAAAAGGTGCCGCAGCAA
ATGCGGCGGAGGCAGGAACGGACCCGAGAGTCCCCAAGGAGAGGAAGGCG
TCGTTCGAGCGCGCGCGACGTGCGGGCGTAGCCCGAAGAATCGAAGAGGG
AGGGGGCGTTCCGCGGGATAGTGATAGCGGTAGCGGCAGCGGTAGCGGCA
GCGAGGCCGACTCGGGCGGCGAGGGAGACGAGGGCAGCGTCCCCGACGAG
TCGCCCTTTCCGTGGAAGGAGGCAGAAACGCCTCCTTTCACCTGGCAGGA
CCCGGATGCCCCCGTCGTTCCCAAGCCTTTCCTGGGGGGAAGCGGCGCCG
ACGGCGAGAAGGGCGGGGCGGCGGCGGGCGCGGAAGCGAAGAGCACCGGG
GGCGGTGGCAAGGCAAGTTCCTTGGCGGCGTCTGATTCGTCATCATGTGT
ACGTATCGTTGTGGTGGCAAACTAGCTCTTGTGGCAGCATTTGGCCTTGG
CAGCATCTACGCGTGGCACCTGTAAGCTTGCAAAGCCGTTTTCGATTGAC
AGGATCGAGGGGAGACTGACTATCTGTGTTGACAAATGGTTGGCAGTTGG
GCGGATGGCCCACTGCATGTTCCAAAACGGTGTTGCATTTTGAGAAGGCC
TACGATACGATGCACGGGTGTTTCCAGCGAGAGTAGTGAACACGCTGTCA
TGAATCCAGAGTGTAATGCCCCCTGAGCTTGACGCCAAACGTCTCAACCC
GTTGAATTAAGCTTCACACACTGCACACCGACGTTTCCCGTATTTCTCCA
CCTCTGGTGGTCTACATGTGTCACAGGTAGTTTTGGTTACTTCGTCGCAT
GTGTTTCATGATTCACTGCAACTGTCGTAGCGATCGACACTGGTCCGTCT
GTGGGATGGCTTTTTCCCCACGCCTTTCGTTCGATGGCACGGACCATCGG
TGTTGATCGCTCAGCAATGTACGCGCTGTGTTTGTGAAGAAGGACTCATT
CGTTTTCATTTCGTGCAGCTGTCCCAGCGAGCTTCCAGCGTCTGCGTACC
GCCAACCCCGTTGGTGGGGGCCAGTTCCTTCGCTTGCTGAGAGAAAGCTG
TCATGTCCATTTTTTTTTCGAATGCACACACCGGGATGGCCGTCATCAAC
CCCGATTTTTCCTGCTACGACATTCCCCAGATACCACGCCCCCCCCCCCC
GCCCGCCAACCCGTCTCCAGTCTACACGAAGAAGAGGTCAGCGCAAGAAG
ACCCAACAGCAGCAGCTGCAGCTGCAGCAGGAAGAGCACCCAGTGCTGGG
ATGCTTGGTGGCCGACCTCAAGTACAAGCGCGTGTACGTGTCGTCCTTGG
AGGCCCTGGAGAAGGTGCGGGTGTGGGAGGAGGCGCGGACTCTGCGGCCG
GTGCACGCGGCCGAGATCTTCGAGGGCAAGGCGATCGAGGCGCAGAAGCT
CGAGGTCAGGCGGGTCAAGGAGGACGGCAAAGAAGAGAAGGACGAGAATC
TGGTATGTTCAGATGCTATGCAATTTGTTGTGCACGGATGAATGCCTGCT
TGTTTGTGTTTGGTTGGCTGTAGATGTGTTTGTTGGTCGGCTTGATGTTT
GCCCGTGCTGCACAACAACGTTTGATTTGCTGTGCTCGGGGACGTATTTT
ACTGGCTCGTTTGCTTTCTGCGTTCGCGCGTGGCAGTCCTTCTCTTGCAC
GTTTCTGCTGTATTTTGTTGCCGCGTGTAGAACCTGCTTGTTAACGTTGC
GGGCAGCCCGTTGCTTGTTGTTGGTCTCTCGTATTATTTACTCCTCCTTC
TGGGCAATGCTGTCGTTGGAACAAGCCTTTGACGTGTTTGATGCAGTCGC
CCCGCGTCTAGAGCACAAACGAGTTGATGTGCCTGATTTCGCTTCGCTTA
GACCCTTTTCGCTCGATCGGATTTTGGTGTGCCTCGAAACCAGCATAGTC
GCGTAAACCTCTGGCCGACCATTGAACAGACGTCAGTACCAGTGCGGTTG
AAACAGAAAGTGCTTCTAAAAGGCGTTGTGTGTGTGCGCATTTTGCCCAT
TCTTTGCGAGACAGGTGGCGAAGGGCATGCCTGGAGTGATATCTCTCTAC
CGACGGCCGCTCTTGCCGGTAGGTTGTGTTAACGCATCGCTGGGGACGGC
GGCCTAAGCTGTCCTTCCGCTGGTTTTCCGTGCGGTTATGCGGGTGGTGC
TGGTGTCTTGTTTTGTTGTGTCATGTCTTTGTACAGATCAAATCTCGTCG
TTGGAACGACGTGGTTGTGGTCGTGGTACAAGGCAAGGCCCACCGTCGTT
ACTGGCACGGAATACCGAGCTTCCGTCCCGTTGCCGTTGAGTACCACGTT
ATATGAACACCTCACCAAGAAGCCTAACGGACCTACGGCGTTAGCAACAC
CATCCCAGGCACGTCACCCCCCGGTACACTTATGTTACAGCTGCGGCGGT
GCCCCCTCTGTCGCTTAGTGTATACCTACCCCATGTACAACTGTTCCCTT
TTTGTCTCAGCCTTTGCTACCGCCGCCGCTGCCACGGGAAGCTGACGAAG
AGAAATCCATGACGCATGTTCACCGCTGTTGTCTTTTTTTTCTCTGCCGT
CGCTGCCGCCGCCGCTGCCACGGGAAGCTGACGAAGAGAAATCAGCAGTA
CGTCTTGGGGGTCGTCGATGGGCAGCACCGCCTACGGGCGCTGAAGATGC
TGGCGGACGCGAAGATGTGGGACCACTCGGAGCGGAACGTGGTGGTAGAG
GTGTTCGACGCCAAGGACGAGAGGGACATCGAAGAGCTGTACGCGGAAAT
CAATAGGCGAGAGAGAAGAGAGCCCTACTGTACCCTTCCGCCGCAGTGAA
TTTAGGCACCTCTAGCAGTGAATGGGAGGATATGAGCAGAGGAGTGGCGC
TCCCGTCTGGCGTTGGAGCAGTCGTTTCTCACCGTTGGTGTAACTGTACA
CAACAGTCGGCATGGCATTTCCTCAACCACCCAGGTGTGCTGTGAGTGCA
ACTGTTTTTGAGGAGTAGGAGTGAAAAGGGCAGCGGCGGTTTTAGTGGAA
CGTACTTGAGTATCGATAAGTAGTTGTTGTTGTAGAAAAGTACCTTACCA
AAGAGGCCTGCTCGGCTATGCGGATCAAACTACGCCCCGTGATTCACTGC
AATTGGTTGGACTTTGTTAAGGCTCTCCTTACAATCAAGCCCGCACCAGA
GGCTTCACGGAAGACAAGATCAATTGCTGGTATAGCCAGTGGCTTGGCGC
GTGGAAAAAGAAACGAGAATGACCGTTGGTTGATTCTGATCGATGCCACG
GGGGAACCTAGGTACCCTCGCTTTAGCCAACAAGCCATGATGGTAGGCGT
AGGGCATGAGGTAGAATAGGACATAACAGCAGTGAGGACTGGAAAATGCT
GCTCTGGCAGTGTCCTGTTCATGGGTGTGCAGCAGCAGCATGAGGGGGGG
GAAACCACCCGCTTCACAACGTTCGCGGCTCCTCGCTCAACGCACAACAC
ATGATGGAAAATTGTGGCCGTGACACAGCAGCAAGCTTGGAGGTGTACAT
GATTGCGTGTCTTACTCGAATTGTTTGTGCATGTCCCTCTCGAGTCTGCC
ATCCCCGCGTTGCAAAACGCTGCCGACCCTCTGCCTTTTGGAACACACCA
AAACGTGCTGATGGTAACACCGTTTGCCAACCCGTGTTTTGTGCGTTCCG
CGTTTTGTCACTCTTCTTTTTTTTCTTGTATTTGTCCCGGCCAGGGCGGA
GCCGGTTCAAATCGATCTAGACATACCAGGGCCGCAAGAGGTGTACAAGT
GCGCCGAGGAGGTTGTCCTTCACTTGTACAAGGTAAGGGGGTCCCAACAA
ACAGGTTGATGATTTGCGGAGCCCCGCCCTGGCAAAAAAGTGGTGAACAC
TACATGCAACACCGCGTAGGATACTCAACCTTGGGTTATCGCATCGCTCC
CAACAGCGGTGGCATGCTCGGAAGTTCCTTTTCGCGAAACGAACGGGAGT
CGCACACGAAGAGGCTGAAAACATTCTAGTCTTGTTTCCTTGGTTTTGGT
TGTGTTCGCTGAGCTGATCCTGTTTAGTGCTCTACCGCCGAAGTGTTACT
GCACAACAGTAAATCTGTGGTGGCGAGGACGGGGCGGGTGCTGCTCTAGG
GCGAGTGCGGCACACTCTTGGGGGCTGCAATTGTCTGCGTTCCCCTGAGG
ACCAATGCAATAAACAAACTCGATCCCGTCATCCTGTCTGTAGAACAGCT
CGTACTTGCCACTAACGAGGATTTCACGCACATGGAGGAATCAAGAGGTG
TGGTTCAACCCTGGCCGGAAGAGGGACATTCGTTAGTTGTTAAAGGGATT
TGTTTGTGAACGGTGGGGTTTTGCACCGTTCCAAGACGGCGGCAGACTGC
CTCTGCTATGGCGACTGATCGTTTCCAGTCGGCGTCGTGTTGTTCGGCAT
CCGAACGTCGGTCGCCATTCGTGTGTATCGATTTTTTTGTAGTATTTCAC
GTACTGAGGGCGAATCGTGACAGCCTTTTGAACTCTCCCTTGTTTTTCGC
TTGTTCGTTACGATTTTTCTCCCTCTTTTGGTGACGATGAACATCAATGG
CCTTTGGCCACGGCGCGCCTTCTCCACCACGACCACGCCCAGCAATTCCG
GCCCATGTTTGGGGGCAAGAGGGTCCGCCCGCCGACCCTGAACGCCATTG
TCTTCCGTGAGAACGTGAGGGAAAACGCACCGTGCTTTGGGTTTTGTTTT
GGTGTGTTTGATTCGCGTTTGGTTGGCTCGCTTCGCTCGGCATTGGCTTC
CTTATTTGCTTGGGGGGGTGGGGGGGGGGTAGCGCCTGCTGTTTTCTCGC
AGCGAAGATTGTGGGTTCGAGTTGGCGTCCTTGACAGGGATATGTCTTGC
GCAATAGTGCTAGCGCGTCTCCCTTGTTCCTCGCGGTCGACTTTCACGAC
AAACGTCTAAGTAGGAGACATCGATCGAGGCCCTCGCTGGCTGATAGGCG
GCGTCGCCTGGTTCTTCCGCCACGTAGAGCATCGAAAATACCCACGGGCC
GGTCTCTAGATCGCGACCTGCCGGTCCTACCGGTTCAACCGTACTGTAAC
CTGCTCTTGTCGCTGAACCTGACTGGTACGGCGCGGCGTGACCCAGCTGC
CGGAAGGTTTGCTCCGCATGTCCGTGCTTCCCCATTGACTTTCCGCCGTA
TGTACGCCGTAAAACGCTTAGGCCAACCTCAAACACCGACGCCAACGCCA
GTTGGTGGGTAAAAGGCGTTATTTTCCGACACAAACTTACCGGCCTCACC
CTCGCGACTGCCTCTCACCCTCTGTATACGAAAACCGGGACGCTTGCTTG
TCCCAATCTTTTTTTTTTTTGCGGCTCAGTTGATAAGAACCGGGTTGATC
GAGCGGCACGAGCTGTTCACCCCCCACCTTCTCCTCGACTTCCTGCTGAG
GGTGAACGAGATGATGTCCAGGCGGGACGTGCAGACGTGGGCGCTCATGG
TCGGCGACGAGGAGGGCTGCTATGTGAGCGGCCACGGCAGCACTAGTATT
TTGGAATTTTTTGGTAGATGTGTTCAATAAGTCGCGCCGACTTCGGTCGT
TTTGCAGGCGCTATATACCTACCTTGACTTCTTCGTTTGGCAGTTCCAAC
GCGGGGTCACATTAAAAGACCCCCCCCGCATTGCGTGCCTTAACTCGTTC
CTTGTCCCTTGCGGCGTGTTGTGTAAGACAAAGCTCAACTCTTGTCGCCG
AGTGCACGCGTTGTAAGGGAAGCGCCTGCTTGCGCTGACTCTGTGTCATC
GCGCAATGTGCATGTTGCAAACCTCGCGTAGTCTTTAATCAGCAAGAACA
TCCCCTCCGAAGAATGCCACGCCCAACCTGCTCAACCTCTTGTTTTAGGA
GTCCCTGCTAGTGCGCGGTTCGTCACCTGCGGCCGGCGAGGCTGTCAGTT
TTCCATGTTCGATTCGTGAAAAATATGCACTTGTAGATATCATGGTCAAG
GGTTTGCTAGACAGAAGCTTTCGGGGTTGGCGCTCGGTAAATGGCACATC
AAAACGGTGTGGTCAGTCTGGCGTCTCGAGTTCTCTTCTCGAAAACACAT
GGCCCCGTGTTGGCGACCGCGACGCAGTACCAGAACTCGTGA
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Coding sequence (CDS) from alignment at chr_28:755789..763030-

>Ec-28_000790.3 ID=Ec-28_000790.3|Name=Ec-28_000790.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=435bp|location=Sequence derived from alignment at chr_28:755789..763030- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCTTGGTGGCCGACCTCAAGTACAAGCGCGTGTACGTGTCGTCCTTGG
AGGCCCTGGAGAAGGTGCGGGTGTGGGAGGAGGCGCGGACTCTGCGGCCG
GTGCACGCGGCCGAGATCTTCGAGGGCAAGGCGATCGAGGCGCAGAAGCT
CGAGGTCAGGCGGGTCAAGGAGGACGGCAAAGAAGAGAAGGACGAGAATC
TGGTGGCGAAGGGCATGCCTGGAGTGATATCTCTCTACCGACGGCCGCTC
TTGCCGCTGACGAAGAGAAATCAGCAGTACGTCTTGGGGGTCGTCGATGG
GCAGCACCGCCTACGGGCGCTGAAGATGCTGGCGGACGCGAAGATGTGGG
ACCACTCGGAGCGGAACGTGGTGGTAGAGGTGTTCGACGCCAAGGACGAG
AGGGACATCGAAGAGCTGTACGCGGAAATCAATAG
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Synonyms
The feature 'Ec-28_000790.3' has the following synonyms
Synonym
Esi0098_0043
Esi_0098_0043