Ec-28_000790.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-28_000790.1
Unique NameEc-28_000790.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length715
Homology
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BLAST of Ec-28_000790.1 vs. uniprot
Match: D7G9F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9F9_ECTSI)

HSP 1 Score: 1206 bits (3120), Expect = 0.000e+0
Identity = 714/714 (100.00%), Postives = 714/714 (100.00%), Query Frame = 1 
Query:    1 MFSSSVIRRGRCSLARPPAATRCKVIVVDRGQPQTSRKGQQHAAIHRCPAGAAATAPPARGGGAPSGEAAAGKVQGSIASCCGTKHNLVLGPGIKQHQYFLSETTGGTVNWRRHASTLSRGDNCCLSLRPGAASSALRSRSLQTGGPALQLDRRGFSAGQGPDSDHDGGYEYXXXXXXXXXXXXXXXXSTLFGASSGAKTAAKTEEAGALTAVKEPPAKKNTKPRIPRNRRGGKGERNPSPTEAVQAVAVADGDAGTPAPSPEASEAPPKKAPKAKTPRKRRGNQVKRNPSPTAAAQAXXXXDGEEAGTTATEAAADPXXXNKAPKAKAPRKRRGGQGESSRSPNAGPKDAERKGAAANAAEAGTDPRVPKERKASFERARRAGVARRIEEGGGVPRDSDSGSGXXXXXEADSXXXXXEGSVPDESPFPWKEAETPPFTWQDPDAPVVPKPFLGGSGADGEKGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQLQQEEHPVLGCLVADLKYKRVYVSSLEALEKVRVWEEARTLRPVHAAEIFEGKAIEAQKLEVRRVKEDGKEEKDENLLTKRNQQYVLGVVDGQHRLRALKMLADAKMWDHSERNVVVEVFDAKDERDIEELYAEINRAEPVQIDLDIPGPQEVYKCAEEVVLHLYKLIRTGLIERHELFTPHLLLDFLLRVNEMMSRRDVQTWALMVGDEEGCYYQNS 2142
            MFSSSVIRRGRCSLARPPAATRCKVIVVDRGQPQTSRKGQQHAAIHRCPAGAAATAPPARGGGAPSGEAAAGKVQGSIASCCGTKHNLVLGPGIKQHQYFLSETTGGTVNWRRHASTLSRGDNCCLSLRPGAASSALRSRSLQTGGPALQLDRRGFSAGQGPDSDHDGGYEYXXXXXXXXXXXXXXXXSTLFGASSGAKTAAKTEEAGALTAVKEPPAKKNTKPRIPRNRRGGKGERNPSPTEAVQAVAVADGDAGTPAPSPEASEAPPKKAPKAKTPRKRRGNQVKRNPSPTAAAQAXXXXDGEEAGTTATEAAADPXXXNKAPKAKAPRKRRGGQGESSRSPNAGPKDAERKGAAANAAEAGTDPRVPKERKASFERARRAGVARRIEEGGGVPRDSDSGSGXXXXXEADSXXXXXEGSVPDESPFPWKEAETPPFTWQDPDAPVVPKPFLGGSGADGEKGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQLQQEEHPVLGCLVADLKYKRVYVSSLEALEKVRVWEEARTLRPVHAAEIFEGKAIEAQKLEVRRVKEDGKEEKDENLLTKRNQQYVLGVVDGQHRLRALKMLADAKMWDHSERNVVVEVFDAKDERDIEELYAEINRAEPVQIDLDIPGPQEVYKCAEEVVLHLYKLIRTGLIERHELFTPHLLLDFLLRVNEMMSRRDVQTWALMVGDEEGCYYQNS
Sbjct:    1 MFSSSVIRRGRCSLARPPAATRCKVIVVDRGQPQTSRKGQQHAAIHRCPAGAAATAPPARGGGAPSGEAAAGKVQGSIASCCGTKHNLVLGPGIKQHQYFLSETTGGTVNWRRHASTLSRGDNCCLSLRPGAASSALRSRSLQTGGPALQLDRRGFSAGQGPDSDHDGGYEYXXXXXXXXXXXXXXXXSTLFGASSGAKTAAKTEEAGALTAVKEPPAKKNTKPRIPRNRRGGKGERNPSPTEAVQAVAVADGDAGTPAPSPEASEAPPKKAPKAKTPRKRRGNQVKRNPSPTAAAQAXXXXDGEEAGTTATEAAADPXXXNKAPKAKAPRKRRGGQGESSRSPNAGPKDAERKGAAANAAEAGTDPRVPKERKASFERARRAGVARRIEEGGGVPRDSDSGSGXXXXXEADSXXXXXEGSVPDESPFPWKEAETPPFTWQDPDAPVVPKPFLGGSGADGEKGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQLQQEEHPVLGCLVADLKYKRVYVSSLEALEKVRVWEEARTLRPVHAAEIFEGKAIEAQKLEVRRVKEDGKEEKDENLLTKRNQQYVLGVVDGQHRLRALKMLADAKMWDHSERNVVVEVFDAKDERDIEELYAEINRAEPVQIDLDIPGPQEVYKCAEEVVLHLYKLIRTGLIERHELFTPHLLLDFLLRVNEMMSRRDVQTWALMVGDEEGCYYQNS 714
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BLAST of Ec-28_000790.1 vs. uniprot
Match: A0A6H5KDW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDW4_9PHAE)

HSP 1 Score: 890 bits (2299), Expect = 0.000e+0
Identity = 540/680 (79.41%), Postives = 560/680 (82.35%), Query Frame = 1 
Query:    1 MFSSSVIRRGRCSLARPPAATRCKVIVVDRGQPQTSRKGQQHAAIHRCPAGAAATAPPARGGGAPSGEAAAGKVQGSIASCCGTKHNLVLGPGIKQHQYFLSETTGGTVNWRRHASTLSRGDNCCLSLRPGAASSALRSRSLQTGGPALQLDRRGFSAGQGPDSDHDGGYEYXXXXXXXXXXXXXXXXSTLFGASSGAKTAAKTEEAGALTAVKEPPAKKNTKPRIPRNRRGGKGERNPSPTEAVQAVAVADGDAGTPAPSPEASEAPPKKAPKAKTPRKRRGNQVKRNPSPTAAAQAXXXXDGEEAGTTATEAAADPXXXNKAPKAKAPRKRRGGQGESSRSPNAGPKDAERKGAAANAAEAGTDPRVPKERKASFERARRAGVARRIEEGGGVPRDSDSGSGXXXXXEADSXXXXXEGSVPDESPFPWKEAETPPFTWQDPDAPVVPKPFLGGSGADGEKGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQLQQEEHPVLGCLVADLKYKRVYVSSLEALEKVRVWEEARTLRPVHAAEIFEGKAIEAQKLEVRRVKEDGKEEKDENL------------------LTKRNQQYVLGVVDGQHRLRALKMLADAKMWDHSERNVVVEVFDAKDERDIEELYAEINRAEPVQIDLDIPGPQEVYKCAEEVVLHLYK 1986
            MFSSSVIRRGRCSLARPPAATRC  IVVDRGQPQTSRKGQQHAAIHRC AGAAATA PARGGG  SGE AAGKVQ SI SCCGTKHNLVL  G +QHQ FLSET+GGTVNWRRHASTLSRG+  CLSLRPGAASSALRSR+LQ GGPAL+LDRRGFSAGQGPDS        XXXXXXXXXXXXXXXXSTLFGAS GA+T AKT+EAGA  AVKEPPAK+NTKPRIPRNRRGGKGERNPSPTEA QAVA ADG+AGTPAPSPEAS AP K+APKAKTPRKRR NQ KR+PSP AAAQA    DGEE GT ATEAAA+P   NKAPKAKAPRKRRGGQ ES+RSPNAGP DAERK AAA+AAE GTDPRVP+ERKASFERARRAGVARRIE+GGGVPRDSDSGSG     EADSXXXXX       SPFPWKEAETPPFTWQDPDAPVVPKPFL GSGADGEKGGA           XX                 ++  E HPVLG LVADLKYKRVYV+SLEALEKVRVWEEARTLRPVHAAEIFEGKAIEAQKLEVRRV EDGKEEKDENL                  LTKRNQ YVLGVVDGQHRLRALKMLADAKMWD SERNVV+EVFDAKDERDIEEL      AEPVQIDLDIPGPQEVYKCAEEVVLHLYK
Sbjct:    1 MFSSSVIRRGRCSLARPPAATRCNAIVVDRGQPQTSRKGQQHAAIHRCLAGAAATASPARGGGVASGEEAAGKVQASITSCCGTKHNLVLRLGNEQHQSFLSETSGGTVNWRRHASTLSRGEYYCLSLRPGAASSALRSRALQAGGPALRLDRRGFSAGQGPDSXXXXXXXXXXXXXXXXXXXXXXXXSTLFGASRGAETVAKTKEAGAPAAVKEPPAKRNTKPRIPRNRRGGKGERNPSPTEAAQAVAEADGEAGTPAPSPEASGAPLKRAPKAKTPRKRRANQGKRDPSPAAAAQAVEAADGEEVGTAATEAAAEPPAGNKAPKAKAPRKRRGGQSESARSPNAGPTDAERKRAAADAAEEGTDPRVPEERKASFERARRAGVARRIEDGGGVPRDSDSGSGSGS--EADSXXXXXXXXXXXXSPFPWKEAETPPFTWQDPDAPVVPKPFLAGSGADGEKGGAAAGAEAKITGGXXKASSLAASESSSCE---RIVVEGHPVLGFLVADLKYKRVYVTSLEALEKVRVWEEARTLRPVHAAEIFEGKAIEAQKLEVRRVTEDGKEEKDENLVAKGMPGVITLYRRPLLPLTKRNQSYVLGVVDGQHRLRALKMLADAKMWDQSERNVVIEVFDAKDERDIEEL------AEPVQIDLDIPGPQEVYKCAEEVVLHLYK 669
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BLAST of Ec-28_000790.1 vs. uniprot
Match: A0A0G4J5N5_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J5N5_PLABS)

HSP 1 Score: 85.9 bits (211), Expect = 1.100e-14
Identity = 56/149 (37.58%), Postives = 83/149 (55.70%), Query Frame = 1 
Query: 1492 QQEEHPVLGCLVADLKYKRVYVSSLEALEKVRVWEEARTLRPVHAAEIFEGKAIEAQKLEVRRVKEDGKEEKDENLLTKRNQQYV--LGVVDGQHRLRALKMLADAKMWDHSERNVVVEVFDAKDERDIEELYAEINRAEPVQIDLDIP 1932
            Q   HPVLG +  D+ YKRV+ +S+ AL+ + VW   RTL    A EI +             +K+  +      L  K + + V  LGVVDGQHRL A+++L     WD    N+ V++F   D+ DI +L+++INRAEPV + +D+P
Sbjct:   42 QTPAHPVLGDVARDVTYKRVFFTSISALQGIPVWNRQRTLSQERAVEISQ------------HLKQRPRLPGVITLFEKVSSKGVPELGVVDGQHRLAAVQLLVRQGAWDAHNANIAVDLFRVGDDNDIADLFSDINRAEPVLL-VDLP 177
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BLAST of Ec-28_000790.1 vs. uniprot
Match: A0A7S2XHN0_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XHN0_9EUKA)

HSP 1 Score: 85.9 bits (211), Expect = 2.230e-14
Identity = 64/195 (32.82%), Postives = 96/195 (49.23%), Query Frame = 1 
Query: 1492 QQEEHPVLGCLVADLKYKRVYVSSLEALEKVRVWEEARTLRPVHAAEIFEGKAIEAQK------LEVRRVKEDGKEEKDENLLTKRNQQYVLGVVDGQHRLRALKMLADAKMWDHSERNVVVEVFDAKDERDIEELYAEINRAEPVQIDLDIPGP--QEVYKCAEEVVLHLYKLIRTGLIERHELFTPHLLLDFL 2052
            +   HPVLG LVADL YK+VY +SLE+L+ + +WE+ R  R   A +I + K     K      L     K                Q   +G++DGQHRL A K +A   + D    NV+VEVF   D +  ++L+ EIN+AEPV+  +D+PG     +    ++ V  L+   +       +   PH+ +D L
Sbjct:   90 EANSHPVLGTLVADLGYKKVYRASLESLQNMPMWEKQRAYRDERAKKIAKDKKDSVVKGGFPGCLVAYEFK----------------QTRAIGLLDGQHRLGAQKHMAANGLCDPEANNVLVEVFQFNDGKQADKLFIEINKAEPVK-SIDMPGEVNPNIKVSIDDAVDELHDEFKAMFKVSSKCLAPHVNMDVL 267
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BLAST of Ec-28_000790.1 vs. uniprot
Match: W7TLW5_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLW5_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 2.620e-14
Identity = 61/184 (33.15%), Postives = 95/184 (51.63%), Query Frame = 1 
Query: 1504 HPVLGCLVADLKYKRVYVSSLEALEKVRVWEEARTLRPVHA--------AEIFEGKAIEAQKLEVRRVKEDGKEEKDENLLTKRNQQYVLGVVDGQHRLRALKMLADAKMWDHSERNVVVEVFDAKDERDIEELYAEINRAEPVQIDLDIPGPQEVYKCAEEVVLHLYKLIRTGLIERHELFTP 2031
            HPV G LV DL YK++Y +S++ L  + +WE+ R  R   A        A++ EGKA+                      LT       +G++DGQHRL ALK+L D+ +       ++VEVF  K + D++ L+ EIN A+PV I +D+P   +  +  +E++    +L+R   IE  E+F P
Sbjct:  107 HPVFGELVKDLTYKKIYCTSVQKLASIPIWEQQRIYRAERAQLLANDIKAKLQEGKALTLP-----------------GSLTVYEMGEEIGLLDGQHRLGALKLLMDSGVLIPEAHLILVEVFPVKAQEDVKRLFTEINTAQPVSI-IDMPDMADASE--KEIITQTAELLR---IEFSEMFKP 267
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BLAST of Ec-28_000790.1 vs. uniprot
Match: A0A4D9DI08_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DI08_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 4.450e-11
Identity = 51/147 (34.69%), Postives = 81/147 (55.10%), Query Frame = 1 
Query: 1492 QQEEHPVLGCLVADLKYKRVYVSSLEALEKVRVWEEARTLRPVHAAEIFEGKAIEAQKLEVRRVKEDGKEEKDENLLTKRNQQYVLGVVDGQHRLRALKMLADAKMWDHSERNVVVEVFDAKDERDIEELYAEINRAEPVQIDLDIP 1932
            +   HPVLG L+AD+ YK+VY +++  L  V +WE+ R LR   A  I   K  ++  +++  +           L    ++QY L  +DGQHRL ALK+LAD+ +        ++EVF  + E +   L+ EIN A PV++ +D+P
Sbjct:   35 EDSSHPVLGQLIADMGYKKVYCATINQLADVPIWEKQRILRRERAESIAREKMRQSFPVKLPGII---------TLYQLADKQYKL--LDGQHRLAALKILADSGIISKDNNFCLLEVFTLEKESEARALFLEINSAMPVKL-IDLP 169
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BLAST of Ec-28_000790.1 vs. uniprot
Match: W7TKX0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKX0_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 9.790e-11
Identity = 51/147 (34.69%), Postives = 81/147 (55.10%), Query Frame = 1 
Query: 1492 QQEEHPVLGCLVADLKYKRVYVSSLEALEKVRVWEEARTLRPVHAAEIFEGKAIEAQKLEVRRVKEDGKEEKDENLLTKRNQQYVLGVVDGQHRLRALKMLADAKMWDHSERNVVVEVFDAKDERDIEELYAEINRAEPVQIDLDIP 1932
            +   HPVLG L+AD+ YK+VY +++  L  V +WE+ R LR   A  I   K  ++  +++  +           L    ++QY L  +DGQHRL ALK+LAD+ +        ++EVF  + E +   L+ EIN A PV++ +D+P
Sbjct:  110 EDSSHPVLGQLIADMGYKKVYCATINQLADVPIWEKQRILRRERAESIAREKMRQSFPVKLPGII---------TLYQLADKQYKL--LDGQHRLAALKILADSGIISKDNNFCLLEVFTLEKESEARALFLEINSAMPVKL-IDLP 244
[Close]
BLAST of Ec-28_000790.1 vs. uniprot
Match: A0A7S4ACC8_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ACC8_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 5.680e-8
Identity = 70/244 (28.69%), Postives = 112/244 (45.90%), Query Frame = 1 
Query: 1492 QQEEHPVLGCLVADLKYKRVYVSSLEALEKVRVWEEARTLRPVHAAEIFEGKAIEAQKLEVRRVKEDGKEEKDENLLTKRNQQYVLGVVDGQHR---LRALKMLADAKM--------WDHSER---NVVVEVFDAKDERD--IEELYAEINRAEPVQIDLDIPGPQEVY--KCAEEVVLHLYKLIRTGLIERHELFTPHLLLDFL---------LRVNEMMSRRDVQTWALMVGDEEGCYYQNS 2142
            + +EHP+LG ++ADL YKR++  S   L  + VW   R  R   A      KA+  +K +   +   G       +    +    L +VDGQHR   + ALK   + K+          H+E+    V+VEV+  K E D   E+++ EIN+AEPV++ +D+PG   V   K   E V  LY+   T          P++ +D L         L+ +++ + + +  W L      G  Y+NS
Sbjct:  518 EDQEHPILGPVIADLGYKRIHFVSAGRLGNIPVWNRNRIYRNNRA------KAMAVEKAKSMELGFPGA------ICLHESAGGKLSIVDGQHRVGMMTALKTAFNKKVEKGEDLGGLKHAEKVFEKVLVEVYPEKAEGDKFAEKVFLEINKAEPVKL-IDMPGVASVADRKIITEAVAILYENYPTMFSPSQRCRIPNVNVDNLRSAIFGSNILKRHQLKTSKKLVEWLLETNTALGLEYENS 748
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BLAST of Ec-28_000790.1 vs. uniprot
Match: A0A7S2AIA4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AIA4_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.400e-6
Identity = 54/158 (34.18%), Postives = 83/158 (52.53%), Query Frame = 1 
Query: 1486 QLQQEEHPVLGCLVADLKYKRVYVSSLEALEKVRVWEEARTLRPVHAAEIFEGKAIEAQKLEVRRVKEDG------KE-EKD--------ENLLTKRNQQYVLGVVDGQHRLRALKMLADAKMWDHSERNVVVEVFDAKDERDIEELYAEINRAEPVQ 1914
            QL  E+ P+LG L+ DL+YKR+Y   + AL ++ VW+  R  +   +  I   K ++A K   RR+   G      KE EK         +NL   +  +   G++DGQHR+ ALK L D   +    + V +EV   + E  + +L+ +IN+AEPVQ
Sbjct:  190 QLHVEDDPILGKLICDLEYKRLYTIEIPALTRIPVWDNNRHYKQERSHRI--AKDLKANKN--RRIILPGLITIYEKEWEKQAVPTTALLDNLEELQKARKRFGILDGQHRVGALKKLHDDGDY---LKPVEIEVIRLEGEEQVRDLFNDINKAEPVQ 340
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BLAST of Ec-28_000790.1 vs. uniprot
Match: A0A7S0T5L6_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0T5L6_9CHLO)

HSP 1 Score: 59.7 bits (143), Expect = 7.680e-6
Identity = 54/157 (34.39%), Postives = 81/157 (51.59%), Query Frame = 1 
Query: 1504 HPVLGCLVADLKYKRVYVSS---LEALEKVRVWEEARTLRPVHAAEIFEGKAIEAQ---------KLEVRRVK-EDGKEEKDENLLTKRNQQYVLGVVDGQHRLRALKMLADAKMWDHSERNVVVEVFDAKDERDIEELYAEINRAEPVQIDLDIPG 1935
            HPV G L+ D  YK+VY      L + +KV V+E+ R  R   A  I   K+ EA             +  VK E G  E  E+       +  + ++DGQHR+ ALK+L   K+    ++ V+VEVF   DE+   +L+ EIN A+P++  +D+PG
Sbjct:   58 HPVFGTLLHDFGYKKVYAMPAVHLVSKDKVMVYEQQRAFRAERAEVIAAEKSKEASFSIPGVISIAEGIVPVKAEAGGAESGESA------RRTVSILDGQHRVGALKILLKNKVLTKGDQ-VLVEVFPDVDEKRAVDLFMEINSAQPIRF-VDLPG 206
The following BLAST results are available for this feature:
BLAST of Ec-28_000790.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7G9F9_ECTSI0.000e+0100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KDW4_9PHAE0.000e+079.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0G4J5N5_PLABS1.100e-1437.58Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
A0A7S2XHN0_9EUKA2.230e-1432.82Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
W7TLW5_9STRA2.620e-1433.15Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A4D9DI08_9STRA4.450e-1134.69Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TKX0_9STRA9.790e-1134.69Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A7S4ACC8_9STRA5.680e-828.69Hypothetical protein n=2 Tax=Pseudo-nitzschia aust... [more]
A0A7S2AIA4_9STRA1.400e-634.18Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S0T5L6_9CHLO7.680e-634.39Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:755789..762955 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1223.8
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7G9F9
Length2145
Hectar predicted targeting categorymitochondrion
Gene idEc-28_000790.1
EggNOG OGs2C3TE@1,2S2UE@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_000790Ec-28_000790Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_28 755789..763030 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000790.1Ec-28_000790.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_28 755789..762955 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000790.1.6Ec-28_000790.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 755789..755803 -
Ec-28_000790.1.5Ec-28_000790.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 756408..756551 -
Ec-28_000790.1.4Ec-28_000790.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 758099..758186 -
Ec-28_000790.1.3Ec-28_000790.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 759125..759303 -
Ec-28_000790.1.2Ec-28_000790.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 760429..760710 -
Ec-28_000790.1.1Ec-28_000790.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 761519..762955 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000790.1CDS:Ec-28_000790.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_28 755789..755803 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-28_000790.1 ID=Ec-28_000790.1|Name=Ec-28_000790.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=715bp
MFSSSVIRRGRCSLARPPAATRCKVIVVDRGQPQTSRKGQQHAAIHRCPA
GAAATAPPARGGGAPSGEAAAGKVQGSIASCCGTKHNLVLGPGIKQHQYF
LSETTGGTVNWRRHASTLSRGDNCCLSLRPGAASSALRSRSLQTGGPALQ
LDRRGFSAGQGPDSDHDGGYEYDYSSGDSGSDSECESESTLFGASSGAKT
AAKTEEAGALTAVKEPPAKKNTKPRIPRNRRGGKGERNPSPTEAVQAVAV
ADGDAGTPAPSPEASEAPPKKAPKAKTPRKRRGNQVKRNPSPTAAAQAAE
AADGEEAGTTATEAAADPPAANKAPKAKAPRKRRGGQGESSRSPNAGPKD
AERKGAAANAAEAGTDPRVPKERKASFERARRAGVARRIEEGGGVPRDSD
SGSGSGSGSEADSGGEGDEGSVPDESPFPWKEAETPPFTWQDPDAPVVPK
PFLGGSGADGEKGGAAAGAEAKSTGGGGKSTRRRGQRKKTQQQQLQLQQE
EHPVLGCLVADLKYKRVYVSSLEALEKVRVWEEARTLRPVHAAEIFEGKA
IEAQKLEVRRVKEDGKEEKDENLLTKRNQQYVLGVVDGQHRLRALKMLAD
AKMWDHSERNVVVEVFDAKDERDIEELYAEINRAEPVQIDLDIPGPQEVY
KCAEEVVLHLYKLIRTGLIERHELFTPHLLLDFLLRVNEMMSRRDVQTWA
LMVGDEEGCYYQNS*
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spliced messenger RNA

>Ec-28_000790.1 ID=Ec-28_000790.1|Name=Ec-28_000790.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2145bp|location=Sequence derived from alignment at chr_28:755789..762955- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGTTCTCCTCCAGCGTCATCCGACGGGGACGCTGCTCCCTGGCCAGGCC
ACCCGCTGCAACGCGTTGCAAAGTGATAGTAGTAGACCGAGGTCAACCAC
AGACCAGCAGGAAAGGTCAACAACATGCGGCGATCCATCGGTGTCCCGCA
GGTGCAGCCGCAACAGCACCGCCAGCTAGAGGCGGAGGGGCACCGTCTGG
AGAAGCAGCGGCGGGAAAGGTACAGGGAAGCATCGCTAGTTGCTGCGGGA
CGAAACACAATCTAGTGCTTGGGCCGGGGATTAAGCAGCATCAATATTTT
CTGTCGGAGACCACCGGCGGGACTGTCAACTGGCGACGGCACGCATCGAC
GCTGAGTCGGGGCGACAACTGCTGTCTCTCGCTGCGACCAGGGGCCGCTT
CGTCTGCGTTGCGCAGCCGATCCTTGCAGACTGGTGGGCCCGCTCTTCAG
CTAGATAGGCGTGGTTTCTCAGCTGGACAAGGGCCCGACAGCGATCACGA
TGGCGGTTACGAATATGACTACAGCAGCGGCGACAGCGGCAGCGACAGTG
AGTGCGAGTCTGAGAGTACGCTTTTCGGGGCTAGCAGCGGGGCAAAAACG
GCGGCGAAGACCGAGGAGGCAGGGGCACTGACAGCGGTGAAAGAACCACC
GGCGAAGAAGAACACGAAGCCCAGAATACCGCGCAACAGACGCGGTGGGA
AAGGCGAGAGGAACCCCTCTCCGACAGAAGCCGTTCAAGCGGTAGCAGTA
GCGGATGGGGATGCAGGAACACCGGCACCGTCACCCGAGGCCTCAGAAGC
ACCGCCAAAGAAGGCCCCAAAGGCCAAAACCCCGCGCAAAAGACGTGGCA
ACCAAGTCAAGAGGAACCCCTCTCCGACAGCAGCCGCTCAAGCGGCAGAA
GCAGCGGACGGGGAAGAAGCAGGAACAACAGCAACCGAGGCCGCAGCAGA
CCCACCGGCAGCGAACAAGGCCCCGAAGGCCAAAGCCCCGCGCAAGCGAC
GTGGCGGCCAAGGCGAAAGCTCCCGCTCTCCGAACGCTGGACCCAAAGAT
GCAGAGAGAAAAGGTGCCGCAGCAAATGCGGCGGAGGCAGGAACGGACCC
GAGAGTCCCCAAGGAGAGGAAGGCGTCGTTCGAGCGCGCGCGACGTGCGG
GCGTAGCCCGAAGAATCGAAGAGGGAGGGGGCGTTCCGCGGGATAGTGAT
AGCGGTAGCGGCAGCGGTAGCGGCAGCGAGGCCGACTCGGGCGGCGAGGG
AGACGAGGGCAGCGTCCCCGACGAGTCGCCCTTTCCGTGGAAGGAGGCAG
AAACGCCTCCTTTCACCTGGCAGGACCCGGATGCCCCCGTCGTTCCCAAG
CCTTTCCTGGGGGGAAGCGGCGCCGACGGCGAGAAGGGCGGGGCGGCGGC
GGGCGCGGAAGCGAAGAGCACCGGGGGCGGTGGCAAGTCTACACGAAGAA
GAGGTCAGCGCAAGAAGACCCAACAGCAGCAGCTGCAGCTGCAGCAGGAA
GAGCACCCAGTGCTGGGATGCTTGGTGGCCGACCTCAAGTACAAGCGCGT
GTACGTGTCGTCCTTGGAGGCCCTGGAGAAGGTGCGGGTGTGGGAGGAGG
CGCGGACTCTGCGGCCGGTGCACGCGGCCGAGATCTTCGAGGGCAAGGCG
ATCGAGGCGCAGAAGCTCGAGGTCAGGCGGGTCAAGGAGGACGGCAAAGA
AGAGAAGGACGAGAATCTGCTGACGAAGAGAAATCAGCAGTACGTCTTGG
GGGTCGTCGATGGGCAGCACCGCCTACGGGCGCTGAAGATGCTGGCGGAC
GCGAAGATGTGGGACCACTCGGAGCGGAACGTGGTGGTAGAGGTGTTCGA
CGCCAAGGACGAGAGGGACATCGAAGAGCTGTACGCGGAAATCAATAGGG
CGGAGCCGGTTCAAATCGATCTAGACATACCAGGGCCGCAAGAGGTGTAC
AAGTGCGCCGAGGAGGTTGTCCTTCACTTGTACAAGTTGATAAGAACCGG
GTTGATCGAGCGGCACGAGCTGTTCACCCCCCACCTTCTCCTCGACTTCC
TGCTGAGGGTGAACGAGATGATGTCCAGGCGGGACGTGCAGACGTGGGCG
CTCATGGTCGGCGACGAGGAGGGCTGCTATTACCAGAACTCGTGA
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protein sequence of Ec-28_000790.1

>Ec-28_000790.1 ID=Ec-28_000790.1|Name=Ec-28_000790.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=715bp
MFSSSVIRRGRCSLARPPAATRCKVIVVDRGQPQTSRKGQQHAAIHRCPA
GAAATAPPARGGGAPSGEAAAGKVQGSIASCCGTKHNLVLGPGIKQHQYF
LSETTGGTVNWRRHASTLSRGDNCCLSLRPGAASSALRSRSLQTGGPALQ
LDRRGFSAGQGPDSDHDGGYEYDYSSGDSGSDSECESESTLFGASSGAKT
AAKTEEAGALTAVKEPPAKKNTKPRIPRNRRGGKGERNPSPTEAVQAVAV
ADGDAGTPAPSPEASEAPPKKAPKAKTPRKRRGNQVKRNPSPTAAAQAAE
AADGEEAGTTATEAAADPPAANKAPKAKAPRKRRGGQGESSRSPNAGPKD
AERKGAAANAAEAGTDPRVPKERKASFERARRAGVARRIEEGGGVPRDSD
SGSGSGSGSEADSGGEGDEGSVPDESPFPWKEAETPPFTWQDPDAPVVPK
PFLGGSGADGEKGGAAAGAEAKSTGGGGKSTRRRGQRKKTQQQQLQLQQE
EHPVLGCLVADLKYKRVYVSSLEALEKVRVWEEARTLRPVHAAEIFEGKA
IEAQKLEVRRVKEDGKEEKDENLLTKRNQQYVLGVVDGQHRLRALKMLAD
AKMWDHSERNVVVEVFDAKDERDIEELYAEINRAEPVQIDLDIPGPQEVY
KCAEEVVLHLYKLIRTGLIERHELFTPHLLLDFLLRVNEMMSRRDVQTWA
LMVGDEEGCYYQNS*
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mRNA from alignment at chr_28:755789..762955-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-28_000790.1 ID=Ec-28_000790.1|Name=Ec-28_000790.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=7167bp|location=Sequence derived from alignment at chr_28:755789..762955- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTTCTCCTCCAGCGTCATCCGACGGGGACGCTGCTCCCTGGCCAGGCC
ACCCGCTGCAACGCGTTGCAAAGTGATAGTAGTAGACCGAGGTCAACCAC
AGACCAGCAGGAAAGGTCAACAACATGCGGCGATCCATCGGTGTCCCGCA
GGTGCAGCCGCAACAGCACCGCCAGCTAGAGGCGGAGGGGCACCGTCTGG
AGAAGCAGCGGCGGGAAAGGTACAGGGAAGCATCGCTAGTTGCTGCGGGA
CGAAACACAATCTAGTGCTTGGGCCGGGGATTAAGCAGCATCAATATTTT
CTGTCGGAGACCACCGGCGGGACTGTCAACTGGCGACGGCACGCATCGAC
GCTGAGTCGGGGCGACAACTGCTGTCTCTCGCTGCGACCAGGGGCCGCTT
CGTCTGCGTTGCGCAGCCGATCCTTGCAGACTGGTGGGCCCGCTCTTCAG
CTAGATAGGCGTGGTTTCTCAGCTGGACAAGGGCCCGACAGCGATCACGA
TGGCGGTTACGAATATGACTACAGCAGCGGCGACAGCGGCAGCGACAGTG
AGTGCGAGTCTGAGAGTACGCTTTTCGGGGCTAGCAGCGGGGCAAAAACG
GCGGCGAAGACCGAGGAGGCAGGGGCACTGACAGCGGTGAAAGAACCACC
GGCGAAGAAGAACACGAAGCCCAGAATACCGCGCAACAGACGCGGTGGGA
AAGGCGAGAGGAACCCCTCTCCGACAGAAGCCGTTCAAGCGGTAGCAGTA
GCGGATGGGGATGCAGGAACACCGGCACCGTCACCCGAGGCCTCAGAAGC
ACCGCCAAAGAAGGCCCCAAAGGCCAAAACCCCGCGCAAAAGACGTGGCA
ACCAAGTCAAGAGGAACCCCTCTCCGACAGCAGCCGCTCAAGCGGCAGAA
GCAGCGGACGGGGAAGAAGCAGGAACAACAGCAACCGAGGCCGCAGCAGA
CCCACCGGCAGCGAACAAGGCCCCGAAGGCCAAAGCCCCGCGCAAGCGAC
GTGGCGGCCAAGGCGAAAGCTCCCGCTCTCCGAACGCTGGACCCAAAGAT
GCAGAGAGAAAAGGTGCCGCAGCAAATGCGGCGGAGGCAGGAACGGACCC
GAGAGTCCCCAAGGAGAGGAAGGCGTCGTTCGAGCGCGCGCGACGTGCGG
GCGTAGCCCGAAGAATCGAAGAGGGAGGGGGCGTTCCGCGGGATAGTGAT
AGCGGTAGCGGCAGCGGTAGCGGCAGCGAGGCCGACTCGGGCGGCGAGGG
AGACGAGGGCAGCGTCCCCGACGAGTCGCCCTTTCCGTGGAAGGAGGCAG
AAACGCCTCCTTTCACCTGGCAGGACCCGGATGCCCCCGTCGTTCCCAAG
CCTTTCCTGGGGGGAAGCGGCGCCGACGGCGAGAAGGGCGGGGCGGCGGC
GGGCGCGGAAGCGAAGAGCACCGGGGGCGGTGGCAAGGCAAGTTCCTTGG
CGGCGTCTGATTCGTCATCATGTGTACGTATCGTTGTGGTGGCAAACTAG
CTCTTGTGGCAGCATTTGGCCTTGGCAGCATCTACGCGTGGCACCTGTAA
GCTTGCAAAGCCGTTTTCGATTGACAGGATCGAGGGGAGACTGACTATCT
GTGTTGACAAATGGTTGGCAGTTGGGCGGATGGCCCACTGCATGTTCCAA
AACGGTGTTGCATTTTGAGAAGGCCTACGATACGATGCACGGGTGTTTCC
AGCGAGAGTAGTGAACACGCTGTCATGAATCCAGAGTGTAATGCCCCCTG
AGCTTGACGCCAAACGTCTCAACCCGTTGAATTAAGCTTCACACACTGCA
CACCGACGTTTCCCGTATTTCTCCACCTCTGGTGGTCTACATGTGTCACA
GGTAGTTTTGGTTACTTCGTCGCATGTGTTTCATGATTCACTGCAACTGT
CGTAGCGATCGACACTGGTCCGTCTGTGGGATGGCTTTTTCCCCACGCCT
TTCGTTCGATGGCACGGACCATCGGTGTTGATCGCTCAGCAATGTACGCG
CTGTGTTTGTGAAGAAGGACTCATTCGTTTTCATTTCGTGCAGCTGTCCC
AGCGAGCTTCCAGCGTCTGCGTACCGCCAACCCCGTTGGTGGGGGCCAGT
TCCTTCGCTTGCTGAGAGAAAGCTGTCATGTCCATTTTTTTTTCGAATGC
ACACACCGGGATGGCCGTCATCAACCCCGATTTTTCCTGCTACGACATTC
CCCAGATACCACGCCCCCCCCCCCCGCCCGCCAACCCGTCTCCAGTCTAC
ACGAAGAAGAGGTCAGCGCAAGAAGACCCAACAGCAGCAGCTGCAGCTGC
AGCAGGAAGAGCACCCAGTGCTGGGATGCTTGGTGGCCGACCTCAAGTAC
AAGCGCGTGTACGTGTCGTCCTTGGAGGCCCTGGAGAAGGTGCGGGTGTG
GGAGGAGGCGCGGACTCTGCGGCCGGTGCACGCGGCCGAGATCTTCGAGG
GCAAGGCGATCGAGGCGCAGAAGCTCGAGGTCAGGCGGGTCAAGGAGGAC
GGCAAAGAAGAGAAGGACGAGAATCTGGTATGTTCAGATGCTATGCAATT
TGTTGTGCACGGATGAATGCCTGCTTGTTTGTGTTTGGTTGGCTGTAGAT
GTGTTTGTTGGTCGGCTTGATGTTTGCCCGTGCTGCACAACAACGTTTGA
TTTGCTGTGCTCGGGGACGTATTTTACTGGCTCGTTTGCTTTCTGCGTTC
GCGCGTGGCAGTCCTTCTCTTGCACGTTTCTGCTGTATTTTGTTGCCGCG
TGTAGAACCTGCTTGTTAACGTTGCGGGCAGCCCGTTGCTTGTTGTTGGT
CTCTCGTATTATTTACTCCTCCTTCTGGGCAATGCTGTCGTTGGAACAAG
CCTTTGACGTGTTTGATGCAGTCGCCCCGCGTCTAGAGCACAAACGAGTT
GATGTGCCTGATTTCGCTTCGCTTAGACCCTTTTCGCTCGATCGGATTTT
GGTGTGCCTCGAAACCAGCATAGTCGCGTAAACCTCTGGCCGACCATTGA
ACAGACGTCAGTACCAGTGCGGTTGAAACAGAAAGTGCTTCTAAAAGGCG
TTGTGTGTGTGCGCATTTTGCCCATTCTTTGCGAGACAGGTGGCGAAGGG
CATGCCTGGAGTGATATCTCTCTACCGACGGCCGCTCTTGCCGGTAGGTT
GTGTTAACGCATCGCTGGGGACGGCGGCCTAAGCTGTCCTTCCGCTGGTT
TTCCGTGCGGTTATGCGGGTGGTGCTGGTGTCTTGTTTTGTTGTGTCATG
TCTTTGTACAGATCAAATCTCGTCGTTGGAACGACGTGGTTGTGGTCGTG
GTACAAGGCAAGGCCCACCGTCGTTACTGGCACGGAATACCGAGCTTCCG
TCCCGTTGCCGTTGAGTACCACGTTATATGAACACCTCACCAAGAAGCCT
AACGGACCTACGGCGTTAGCAACACCATCCCAGGCACGTCACCCCCCGGT
ACACTTATGTTACAGCTGCGGCGGTGCCCCCTCTGTCGCTTAGTGTATAC
CTACCCCATGTACAACTGTTCCCTTTTTGTCTCAGCCTTTGCTACCGCCG
CCGCTGCCACGGGAAGCTGACGAAGAGAAATCCATGACGCATGTTCACCG
CTGTTGTCTTTTTTTTCTCTGCCGTCGCTGCCGCCGCCGCTGCCACGGGA
AGCTGACGAAGAGAAATCAGCAGTACGTCTTGGGGGTCGTCGATGGGCAG
CACCGCCTACGGGCGCTGAAGATGCTGGCGGACGCGAAGATGTGGGACCA
CTCGGAGCGGAACGTGGTGGTAGAGGTGTTCGACGCCAAGGACGAGAGGG
ACATCGAAGAGCTGTACGCGGAAATCAATAGGCGAGAGAGAAGAGAGCCC
TACTGTACCCTTCCGCCGCAGTGAATTTAGGCACCTCTAGCAGTGAATGG
GAGGATATGAGCAGAGGAGTGGCGCTCCCGTCTGGCGTTGGAGCAGTCGT
TTCTCACCGTTGGTGTAACTGTACACAACAGTCGGCATGGCATTTCCTCA
ACCACCCAGGTGTGCTGTGAGTGCAACTGTTTTTGAGGAGTAGGAGTGAA
AAGGGCAGCGGCGGTTTTAGTGGAACGTACTTGAGTATCGATAAGTAGTT
GTTGTTGTAGAAAAGTACCTTACCAAAGAGGCCTGCTCGGCTATGCGGAT
CAAACTACGCCCCGTGATTCACTGCAATTGGTTGGACTTTGTTAAGGCTC
TCCTTACAATCAAGCCCGCACCAGAGGCTTCACGGAAGACAAGATCAATT
GCTGGTATAGCCAGTGGCTTGGCGCGTGGAAAAAGAAACGAGAATGACCG
TTGGTTGATTCTGATCGATGCCACGGGGGAACCTAGGTACCCTCGCTTTA
GCCAACAAGCCATGATGGTAGGCGTAGGGCATGAGGTAGAATAGGACATA
ACAGCAGTGAGGACTGGAAAATGCTGCTCTGGCAGTGTCCTGTTCATGGG
TGTGCAGCAGCAGCATGAGGGGGGGGAAACCACCCGCTTCACAACGTTCG
CGGCTCCTCGCTCAACGCACAACACATGATGGAAAATTGTGGCCGTGACA
CAGCAGCAAGCTTGGAGGTGTACATGATTGCGTGTCTTACTCGAATTGTT
TGTGCATGTCCCTCTCGAGTCTGCCATCCCCGCGTTGCAAAACGCTGCCG
ACCCTCTGCCTTTTGGAACACACCAAAACGTGCTGATGGTAACACCGTTT
GCCAACCCGTGTTTTGTGCGTTCCGCGTTTTGTCACTCTTCTTTTTTTTC
TTGTATTTGTCCCGGCCAGGGCGGAGCCGGTTCAAATCGATCTAGACATA
CCAGGGCCGCAAGAGGTGTACAAGTGCGCCGAGGAGGTTGTCCTTCACTT
GTACAAGGTAAGGGGGTCCCAACAAACAGGTTGATGATTTGCGGAGCCCC
GCCCTGGCAAAAAAGTGGTGAACACTACATGCAACACCGCGTAGGATACT
CAACCTTGGGTTATCGCATCGCTCCCAACAGCGGTGGCATGCTCGGAAGT
TCCTTTTCGCGAAACGAACGGGAGTCGCACACGAAGAGGCTGAAAACATT
CTAGTCTTGTTTCCTTGGTTTTGGTTGTGTTCGCTGAGCTGATCCTGTTT
AGTGCTCTACCGCCGAAGTGTTACTGCACAACAGTAAATCTGTGGTGGCG
AGGACGGGGCGGGTGCTGCTCTAGGGCGAGTGCGGCACACTCTTGGGGGC
TGCAATTGTCTGCGTTCCCCTGAGGACCAATGCAATAAACAAACTCGATC
CCGTCATCCTGTCTGTAGAACAGCTCGTACTTGCCACTAACGAGGATTTC
ACGCACATGGAGGAATCAAGAGGTGTGGTTCAACCCTGGCCGGAAGAGGG
ACATTCGTTAGTTGTTAAAGGGATTTGTTTGTGAACGGTGGGGTTTTGCA
CCGTTCCAAGACGGCGGCAGACTGCCTCTGCTATGGCGACTGATCGTTTC
CAGTCGGCGTCGTGTTGTTCGGCATCCGAACGTCGGTCGCCATTCGTGTG
TATCGATTTTTTTGTAGTATTTCACGTACTGAGGGCGAATCGTGACAGCC
TTTTGAACTCTCCCTTGTTTTTCGCTTGTTCGTTACGATTTTTCTCCCTC
TTTTGGTGACGATGAACATCAATGGCCTTTGGCCACGGCGCGCCTTCTCC
ACCACGACCACGCCCAGCAATTCCGGCCCATGTTTGGGGGCAAGAGGGTC
CGCCCGCCGACCCTGAACGCCATTGTCTTCCGTGAGAACGTGAGGGAAAA
CGCACCGTGCTTTGGGTTTTGTTTTGGTGTGTTTGATTCGCGTTTGGTTG
GCTCGCTTCGCTCGGCATTGGCTTCCTTATTTGCTTGGGGGGGTGGGGGG
GGGGTAGCGCCTGCTGTTTTCTCGCAGCGAAGATTGTGGGTTCGAGTTGG
CGTCCTTGACAGGGATATGTCTTGCGCAATAGTGCTAGCGCGTCTCCCTT
GTTCCTCGCGGTCGACTTTCACGACAAACGTCTAAGTAGGAGACATCGAT
CGAGGCCCTCGCTGGCTGATAGGCGGCGTCGCCTGGTTCTTCCGCCACGT
AGAGCATCGAAAATACCCACGGGCCGGTCTCTAGATCGCGACCTGCCGGT
CCTACCGGTTCAACCGTACTGTAACCTGCTCTTGTCGCTGAACCTGACTG
GTACGGCGCGGCGTGACCCAGCTGCCGGAAGGTTTGCTCCGCATGTCCGT
GCTTCCCCATTGACTTTCCGCCGTATGTACGCCGTAAAACGCTTAGGCCA
ACCTCAAACACCGACGCCAACGCCAGTTGGTGGGTAAAAGGCGTTATTTT
CCGACACAAACTTACCGGCCTCACCCTCGCGACTGCCTCTCACCCTCTGT
ATACGAAAACCGGGACGCTTGCTTGTCCCAATCTTTTTTTTTTTTGCGGC
TCAGTTGATAAGAACCGGGTTGATCGAGCGGCACGAGCTGTTCACCCCCC
ACCTTCTCCTCGACTTCCTGCTGAGGGTGAACGAGATGATGTCCAGGCGG
GACGTGCAGACGTGGGCGCTCATGGTCGGCGACGAGGAGGGCTGCTATGT
GAGCGGCCACGGCAGCACTAGTATTTTGGAATTTTTTGGTAGATGTGTTC
AATAAGTCGCGCCGACTTCGGTCGTTTTGCAGGCGCTATATACCTACCTT
GACTTCTTCGTTTGGCAGTTCCAACGCGGGGTCACATTAAAAGACCCCCC
CCGCATTGCGTGCCTTAACTCGTTCCTTGTCCCTTGCGGCGTGTTGTGTA
AGACAAAGCTCAACTCTTGTCGCCGAGTGCACGCGTTGTAAGGGAAGCGC
CTGCTTGCGCTGACTCTGTGTCATCGCGCAATGTGCATGTTGCAAACCTC
GCGTAGTCTTTAATCAGCAAGAACATCCCCTCCGAAGAATGCCACGCCCA
ACCTGCTCAACCTCTTGTTTTAGGAGTCCCTGCTAGTGCGCGGTTCGTCA
CCTGCGGCCGGCGAGGCTGTCAGTTTTCCATGTTCGATTCGTGAAAAATA
TGCACTTGTAGATATCATGGTCAAGGGTTTGCTAGACAGAAGCTTTCGGG
GTTGGCGCTCGGTAAATGGCACATCAAAACGGTGTGGTCAGTCTGGCGTC
TCGAGTTCTCTTCTCGAAAACACATGGCCCCGTGTTGGCGACCGCGACGC
AGTACCAGAACTCGTGA
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Coding sequence (CDS) from alignment at chr_28:755789..762955-

>Ec-28_000790.1 ID=Ec-28_000790.1|Name=Ec-28_000790.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=2145bp|location=Sequence derived from alignment at chr_28:755789..762955- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTTCTCCTCCAGCGTCATCCGACGGGGACGCTGCTCCCTGGCCAGGCC
ACCCGCTGCAACGCGTTGCAAAGTGATAGTAGTAGACCGAGGTCAACCAC
AGACCAGCAGGAAAGGTCAACAACATGCGGCGATCCATCGGTGTCCCGCA
GGTGCAGCCGCAACAGCACCGCCAGCTAGAGGCGGAGGGGCACCGTCTGG
AGAAGCAGCGGCGGGAAAGGTACAGGGAAGCATCGCTAGTTGCTGCGGGA
CGAAACACAATCTAGTGCTTGGGCCGGGGATTAAGCAGCATCAATATTTT
CTGTCGGAGACCACCGGCGGGACTGTCAACTGGCGACGGCACGCATCGAC
GCTGAGTCGGGGCGACAACTGCTGTCTCTCGCTGCGACCAGGGGCCGCTT
CGTCTGCGTTGCGCAGCCGATCCTTGCAGACTGGTGGGCCCGCTCTTCAG
CTAGATAGGCGTGGTTTCTCAGCTGGACAAGGGCCCGACAGCGATCACGA
TGGCGGTTACGAATATGACTACAGCAGCGGCGACAGCGGCAGCGACAGTG
AGTGCGAGTCTGAGAGTACGCTTTTCGGGGCTAGCAGCGGGGCAAAAACG
GCGGCGAAGACCGAGGAGGCAGGGGCACTGACAGCGGTGAAAGAACCACC
GGCGAAGAAGAACACGAAGCCCAGAATACCGCGCAACAGACGCGGTGGGA
AAGGCGAGAGGAACCCCTCTCCGACAGAAGCCGTTCAAGCGGTAGCAGTA
GCGGATGGGGATGCAGGAACACCGGCACCGTCACCCGAGGCCTCAGAAGC
ACCGCCAAAGAAGGCCCCAAAGGCCAAAACCCCGCGCAAAAGACGTGGCA
ACCAAGTCAAGAGGAACCCCTCTCCGACAGCAGCCGCTCAAGCGGCAGAA
GCAGCGGACGGGGAAGAAGCAGGAACAACAGCAACCGAGGCCGCAGCAGA
CCCACCGGCAGCGAACAAGGCCCCGAAGGCCAAAGCCCCGCGCAAGCGAC
GTGGCGGCCAAGGCGAAAGCTCCCGCTCTCCGAACGCTGGACCCAAAGAT
GCAGAGAGAAAAGGTGCCGCAGCAAATGCGGCGGAGGCAGGAACGGACCC
GAGAGTCCCCAAGGAGAGGAAGGCGTCGTTCGAGCGCGCGCGACGTGCGG
GCGTAGCCCGAAGAATCGAAGAGGGAGGGGGCGTTCCGCGGGATAGTGAT
AGCGGTAGCGGCAGCGGTAGCGGCAGCGAGGCCGACTCGGGCGGCGAGGG
AGACGAGGGCAGCGTCCCCGACGAGTCGCCCTTTCCGTGGAAGGAGGCAG
AAACGCCTCCTTTCACCTGGCAGGACCCGGATGCCCCCGTCGTTCCCAAG
CCTTTCCTGGGGGGAAGCGGCGCCGACGGCGAGAAGGGCGGGGCGGCGGC
GGGCGCGGAAGCGAAGAGCACCGGGGGCGGTGGCAAGTCTACACGAAGAA
GAGGTCAGCGCAAGAAGACCCAACAGCAGCAGCTGCAGCTGCAGCAGGAA
GAGCACCCAGTGCTGGGATGCTTGGTGGCCGACCTCAAGTACAAGCGCGT
GTACGTGTCGTCCTTGGAGGCCCTGGAGAAGGTGCGGGTGTGGGAGGAGG
CGCGGACTCTGCGGCCGGTGCACGCGGCCGAGATCTTCGAGGGCAAGGCG
ATCGAGGCGCAGAAGCTCGAGGTCAGGCGGGTCAAGGAGGACGGCAAAGA
AGAGAAGGACGAGAATCTGCTGACGAAGAGAAATCAGCAGTACGTCTTGG
GGGTCGTCGATGGGCAGCACCGCCTACGGGCGCTGAAGATGCTGGCGGAC
GCGAAGATGTGGGACCACTCGGAGCGGAACGTGGTGGTAGAGGTGTTCGA
CGCCAAGGACGAGAGGGACATCGAAGAGCTGTACGCGGAAATCAATAGGG
CGGAGCCGGTTCAAATCGATCTAGACATACCAGGGCCGCAAGAGGTGTAC
AAGTGCGCCGAGGAGGTTGTCCTTCACTTGTACAAGTTGATAAGAACCGG
GTTGATCGAGCGGCACGAGCTGTTCACCCCCCACCTTCTCCTCGACTTCC
TGCTGAGGGTGAACGAGATGATGTCCAGGCGGGACGTGCAGACGTGGGCG
CTCATGGTCGGCGACGAGGAGGGCTGCTATTACCAGAACTCGTGA
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Synonyms
The feature 'Ec-28_000790.1' has the following synonyms
Synonym
Esi0098_0043
Esi_0098_0043