Ec-28_000750.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-28_000750.1
Unique NameEc-28_000750.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length582
Homology
BLAST of Ec-28_000750.1 vs. uniprot
Match: D7G9F6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9F6_ECTSI)

HSP 1 Score: 728 bits (1879), Expect = 9.160e-261
Identity = 416/416 (100.00%), Postives = 416/416 (100.00%), Query Frame = 1
Query:  496 MHTKEKIRAMRDRLPYSSSDRPPTTTIYSCEQFPFDRNPVVGVLIIEGNIVCKNKRTLVVSERAYLFSHMDEVHLEGVHFIVEENAALGIAVATLHVEKLEGDSGEIFTIDPGGFLGGHADHLRPLPENGTKSPFSPDRSAEYTYEQRLGLNPTHLMILALADSGQATDDKVLHMMARSERLRVWQKETATDMEVDLEKCARGFDELLRAKKRERDLQMXXXXXXXXXXXKTTMPQQQADPTTAAVHSSDPKQEHAGQDASSTXXXXXXXXXXXXXXXXXXVPATVTRYWGDEARRXXXXDVALKVTNTGDVLVTVGDLVVVQKRNPMWTKKKESWLQRKVAKSKPVKKIKDVFGRLGRRGKGNGKTDNKARSDXXXXXXGNGDGAPVSTMYSLHVVENGLEVRLEGVFMWGWYAE 1743
            MHTKEKIRAMRDRLPYSSSDRPPTTTIYSCEQFPFDRNPVVGVLIIEGNIVCKNKRTLVVSERAYLFSHMDEVHLEGVHFIVEENAALGIAVATLHVEKLEGDSGEIFTIDPGGFLGGHADHLRPLPENGTKSPFSPDRSAEYTYEQRLGLNPTHLMILALADSGQATDDKVLHMMARSERLRVWQKETATDMEVDLEKCARGFDELLRAKKRERDLQMXXXXXXXXXXXKTTMPQQQADPTTAAVHSSDPKQEHAGQDASSTXXXXXXXXXXXXXXXXXXVPATVTRYWGDEARRXXXXDVALKVTNTGDVLVTVGDLVVVQKRNPMWTKKKESWLQRKVAKSKPVKKIKDVFGRLGRRGKGNGKTDNKARSDXXXXXXGNGDGAPVSTMYSLHVVENGLEVRLEGVFMWGWYAE
Sbjct:    1 MHTKEKIRAMRDRLPYSSSDRPPTTTIYSCEQFPFDRNPVVGVLIIEGNIVCKNKRTLVVSERAYLFSHMDEVHLEGVHFIVEENAALGIAVATLHVEKLEGDSGEIFTIDPGGFLGGHADHLRPLPENGTKSPFSPDRSAEYTYEQRLGLNPTHLMILALADSGQATDDKVLHMMARSERLRVWQKETATDMEVDLEKCARGFDELLRAKKRERDLQMXXXXXXXXXXXKTTMPQQQADPTTAAVHSSDPKQEHAGQDASSTXXXXXXXXXXXXXXXXXXVPATVTRYWGDEARRXXXXDVALKVTNTGDVLVTVGDLVVVQKRNPMWTKKKESWLQRKVAKSKPVKKIKDVFGRLGRRGKGNGKTDNKARSDXXXXXXGNGDGAPVSTMYSLHVVENGLEVRLEGVFMWGWYAE 416          
BLAST of Ec-28_000750.1 vs. uniprot
Match: D7G9G6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G6_ECTSI)

HSP 1 Score: 447 bits (1149), Expect = 3.100e-142
Identity = 338/699 (48.35%), Postives = 358/699 (51.22%), Query Frame = 1
Query:  166 TLHSCDELRSKRTRVQGVAGALLLDFDIVCPEKRVLEVTDNLLIMSNKPDLRLKGVHFRVRKKAALTFMVPTLTLEKLEGVSGPLFTIEPQGSVEMNADQWVPPPENGTEMHTKEK---------------------IRAM---------RDRL-------------------------------------------------------------------------------------------PYSS-------------------------------------SDRPPTTTIYSCEQFPFDRNPVVGVLIIEGNIVCKNKRTLVVSERAYLFSHMDEVHLEGVHFIVEENAALGIAVATLHVEKLEGDSGEIFTIDPGGFLGGHADHLRPLPENGTK--------------------------------------------------------------SPFSPDRSAEYTYEQRLGLNPTHLM------------------------------------------------------------------------------ILALADSGQATDDKVLHMMARSERLRVWQKETATDMEVDLEKCARGFDELLRAKKRERDLQMXXXXXXXXXXXKTTMPQQQADPTTAAVHSSDPKQEHAGQDASSTXXXXXXXXXXXXXXXXXXVPATVTRYWG 1368
            TLHSCDELRS+RT VQG++GALLLDFDI+C E RVLEVTD LL++S+KP+LRLKGVHFRVRKKAALTFMVPTLT+EKLEGVSGPLFTIEPQGSVEMNADQWVPPPENGTE   KE                      IR++         R+RL                                                                                           P S                                      S   P TTI SC++ PF   PV G+LIIEG+IVC  KRTLVVSE A +FS MD V  E VHFIVE+NA L  AVA+L VEKLEGDSGEIFTI+PGGFLGG  D LRPLPENGTK                                                              SPFSPDRSAEYTYEQRLGL PTHLM                                                                              ILALADSGQATDDKVLHMMARSERLRVWQKETATDMEVDLEKCARGFDELLRAKKRERDL  XXXXXXXXXXXKTTMPQQQADPTTA  HSSDPKQEHAGQDASS XXXXXXXXXXXXXXXXX VPATVTRYWG
Sbjct:  325 TLHSCDELRSERTHVQGMSGALLLDFDILCTETRVLEVTDKLLVVSDKPNLRLKGVHFRVRKKAALTFMVPTLTMEKLEGVSGPLFTIEPQGSVEMNADQWVPPPENGTEASEKEAYTPFIPRTKVYPDASYINRLPIRSLGSCDELPLDRNRLDGAVYVTGPIVCDEKRVIEISQETVIFTRSPDLYLMGVHFLVRENAGLWISMGTMTVEALEASTMDFDGDSEEFFTVEPQGHLGLFANEVGPVSEKGTSEDLFSRLVVKSGGALVIEGRMSCATSIMTIIKDSGDTPMTTINSCDRIPFGLIPVRGILIIEGDIVCAEKRTLVVSELALIFSDMDGVRFERVHFIVEQNATLSFAVASLLVEKLEGDSGEIFTIEPGGFLGGQFDQLRPLPENGTKKDEHSLLHAKEGGEFYFDALVRYTSSSITMVAVSVIEDPAWIRLQRLRRRWIERHFQRHQQQSPFSPDRSAEYTYEQRLGLKPTHLMVGEELRFPSSLTTLDRSHTMTMGTDGSLVLAKADRYVVLFDEMIEAVETRASVEETTMATLAGLSPDYDGGDPGLELKILALADSGQATDDKVLHMMARSERLRVWQKETATDMEVDLEKCARGFDELLRAKKRERDLXXXXXXXXXXXXXKTTMPQQQADPTTAG-HSSDPKQEHAGQDASSXXXXXXXXXXXXXXXXXXAVPATVTRYWG 1022          
BLAST of Ec-28_000750.1 vs. uniprot
Match: D7G9F5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9F5_ECTSI)

HSP 1 Score: 231 bits (588), Expect = 1.250e-69
Identity = 137/140 (97.86%), Postives = 137/140 (97.86%), Query Frame = 1
Query:    1 MYYTDSSVMVVRESKSKNGNNSAKXXXXXXXXXXXXXXXDSTRRSLRVVDDVPLSTLHSCDELRSKRTRVQGVAGALLLDFDIVCPEKRVLEVTDNLLIMSNKPDLRLKGVHFRVRKKAALTFMVPTLTLEKLEGVSGPL 420
            MYYTDSSVMVVRESKSKNGNNSAKXXXXXXXXXXXXXXXDSTRRSLRVVDDVPLSTLHSCDELRSKRTRVQGVAGALLLDFDIVCPEKRVLEVTDNLLIMSNKPDLRLKGVHFRVRKKAALTFMVPTLTLEKLEG   PL
Sbjct:    1 MYYTDSSVMVVRESKSKNGNNSAKXXXXXXXXXXXXXXXDSTRRSLRVVDDVPLSTLHSCDELRSKRTRVQGVAGALLLDFDIVCPEKRVLEVTDNLLIMSNKPDLRLKGVHFRVRKKAALTFMVPTLTLEKLEGGGAPL 140          
BLAST of Ec-28_000750.1 vs. uniprot
Match: A0A6H5L8D9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8D9_9PHAE)

HSP 1 Score: 203 bits (516), Expect = 5.220e-52
Identity = 126/338 (37.28%), Postives = 177/338 (52.37%), Query Frame = 1
Query:  133 SLRVVDDV-PLSTLHSCDELRSKRTRVQGVAGALLLDFDIVCPEKRVLEVTDNLLIMSNKPDLRLKGVHFRVRKKAALTFMVPTLTLEKLEGVSGPLFTIEPQGSVEMNADQWVPPPENGTE------------------------------MHTKEKIRAMRDR--------------------------------------------LPYSSS-------------DRPPTTTIYSCEQFPFDRNPVVGVLIIEGNIVCKNKRTLVVSERAYLFSHMDEVHLEGVHFIVEENAALGIAVATLHVEKLEGDSGEIFTIDPGGFLGGHADHLRPLPEN 882
            +L VVDDV PL TL SC+ELR +RT +QGV+G LLLD DIVC EKR+LEV  +++++S+KPDLRLKGVHF V +K +LTF+V T+ LEK+EG SG LFT+EPQG + M+AD+W P PE GTE                              M  K + + +++                                               YS+S             D+ P   + SC++   DRNP  G + I G+IVC  KR + +   A +++ +D++++ GV F VE+   LGI V  + +E LEGDS E  T++P G LG  AD +  LP++
Sbjct:  578 ALAVVDDVLPLYTLESCNELRFERTPIQGVSGVLLLDDDIVCTEKRILEVDHDVIVVSDKPDLRLKGVHFVVHEKVSLTFVVATMVLEKIEGESGELFTVEPQGVLAMSADKWSPSPEIGTEEDVHSLVALKGGTFELDGKASFTASTMTISMRNKNEEKKLKNNDNEDNRGTCQSTVEHPSTATDDNHNAAAPGNADAGVIDVTSGGGHAYSNSISTTPRFHDDAEWDKLPRRNLGSCDELALDRNPPHGRVFITGDIVCDVKRVIEIRTEAMIYAAVDDLYVRGVQFHVEQTGGLGIMVGAMTMEALEGDSAEFITVEPQGHLGMFADSVGRLPDD 915          
BLAST of Ec-28_000750.1 vs. uniprot
Match: D8LLS3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLS3_ECTSI)

HSP 1 Score: 186 bits (471), Expect = 3.390e-46
Identity = 154/454 (33.92%), Postives = 215/454 (47.36%), Query Frame = 1
Query:  499 HTKEKIRAMRDRLPYSSSDRPPTTTIYSCEQFPFDRNPVVGVLIIEGNIVCKNKRTLVVSERAYLFSHMDEVHLEGVHFIVEENAALGIAVATLHVEKLEGDSGEIFTIDPGGFLGGHADHLRPLPENGTK--------------------------------SPFSPD-----RSAEYTYEQRL-GLNPTHLMILALADSGQATDDKVLHMMARSERLRVWQKETATDMEVDLEKCARGFDELLRAKKRERDLQMXXXXXXXXXXXKTTMPQQQADPTTAAVHSSDPKQEHAGQDASSTXXXXXXXXXXXXXXXXXXVPATVTRYWGDEARRXXXXDVALKVTNTGDVLVTVGDLVVVQKRNPMWTKKKESWLQRKVAKSKPVKKIKDVFGRLGRRGKGNGKTDNKARSDXXXXXXGNGD-GAPVSTMYSLHVVENGLEVRLEGVFMWGWYAE 1743
            +T    +A R RL        P T I SCEQ   DR  V+G+L IEG+I+C+  RT+ V+++A + S+ + +H +GVHF V E A L  A +T+  E LEGDS EIFTI+P G++G H     PL ENGTK                                +P + D        E  +  R+  L+  H+M +  +D      +   +   R E +  +   ++      ++  A G       + R  DL++             T  Q+     TA V +S  +   A    ++                   + +T   YWGD        DV LKVT+ GDVLVTVGD VVVQKRNP    +K  W++ K+  S+P KK+K +F RLGRRGK + K DN            + D GA  ST+YSLHVVENG +VRLEGVF+WGWY +
Sbjct: 1082 NTNASSKAKRHRLSLEGMGHLPLTAIESCEQLRVDRTTVLGILTIEGDILCEELRTIEVTDKAVIVSNRNPLHFKGVHFHVHEKATLRFAFSTMLAENLEGDSSEIFTIEPEGYVGLHPTAWGPLSENGTKKDAHSLVIVRKGGEVYFGGEVRYTASSMKVAKTPVAKDLVWIQAGEELRFPSRMTSLDRRHVMNVG-SDGSLVLANIARYQGLRREVMEAFDSWSSRAPHSSVDMLA-GLGPDYNGEDRGLDLKVLASPDVVQ-----TRRQRLKARGTATVVTSGGETTRARLKGAADMPKA--------------ISSTPEGYWGD--------DVVLKVTDMGDVLVTVGDRVVVQKRNP---NRKVGWVK-KLGNSRPAKKVKGIFRRLGRRGKRD-KNDNXXXXXTRENNARDDDKGAVRSTLYSLHVVENGFQVRLEGVFVWGWYVK 1501          
BLAST of Ec-28_000750.1 vs. uniprot
Match: D8LLQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ5_ECTSI)

HSP 1 Score: 180 bits (457), Expect = 2.270e-44
Identity = 173/496 (34.88%), Postives = 231/496 (46.57%), Query Frame = 1
Query:  499 HTKEKIRAMRDRLPYSSSDRPPTTTIYSCEQFPFDRNPVVGVLIIEGNIVCKNKRTLVVSERAYLFSHMDEVHLEGVHFIVEENAALGIAVATLHVEKLEGDSGEIFTIDPGGFLGGHADHLRPLPENGTKSPF-----------------------------SPDRSAEYTYEQRL-GLNPTHLM----------------------------------------ILALADSGQATDDKVLHMMARSERLRVWQKETATDMEVDLEKCARGFDELLRAKKRERDLQMXXXXXXXXXXXKTTMPQQQA---DPTTAAVHSSDPKQEHAGQDASSTXXXXXXXXXXXXXXXXXX---VPATVTRYWGDEARRXXXXDVALKVTNTGDVLVTVGDLVVVQKRNPMWTKKKESWLQRKVAKSKPVKKIKDVFGRLGRRGKGNGK---TDNKARSDXXXXXXGNGD--GAPVSTMYSLHVVENGLEVRLEGVFMWGWYAE 1743
            +T    +A R RL        P T I SCE+  FDR  V+G+L IEG+I+C+++RT+ V+++A + S+ + +H +GVHF V E A L  A +T+  E LEGDS EIFTI+P G++G H     PL ENG K                                +P    E  +  R+  LN  H+M                                        ILA        +D+ L + A+ E     +KE +  +  D    A+G         R RD +              T  +Q     DP    + +S      +G D S  XXXXXXXXXX           + +T   YWGD        DV LKVT+ GDVLV VGD VVVQKRNP    +K  W++ K+  S+P KK+K +F RLGRRGK +      D+  R +  XXXX   D  GA  ST+YSLHVVENG +VRLEGVF+WGWY +
Sbjct: 1198 NTNASSKAKRHRLSLEGMGHLPLTAIESCERLRFDRTTVLGILTIEGDILCEDQRTIEVTDKAVIVSNRNPLHFKGVHFHVHEKATLRFAFSTMLAENLEGDSSEIFTIEPEGYVGLHPTAWVPLSENGMKKDAHSLVNVRKGGEVYFGGEVRYTASSMKVAKTPVAGEELRFPSRMTSLNGRHVMTVGSDGSLVLANIARYQGLRREVMEAFNSWSSRAPQSSVDILAGLSPDYNGEDRGLDLKAKEEA----EKERSPPLRPDSPAAAQGXXXXXGGDLRGRDDESTAEAGYSCVPP--TGEKQDGNINDPADRDISASST----SGGDKSXXXXXXXXXXXXSREGSVNMPTAISSTPEGYWGD--------DVVLKVTDMGDVLVAVGDRVVVQKRNP---NRKVGWVK-KLGNSRPAKKVKGIFRRLGRRGKRDKNDIDNDSNTRENNAXXXXXXXDNKGAVRSTLYSLHVVENGFQVRLEGVFVWGWYVK 1671          
BLAST of Ec-28_000750.1 vs. uniprot
Match: D8LLQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ3_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 7.120e-40
Identity = 107/343 (31.20%), Postives = 172/343 (50.15%), Query Frame = 1
Query:  145 VDDVPLSTLHSCDELRSKRTRVQGVAGALLLDFDIVCPEKRVLEVTDNLLIMSNKPDLRLKGVHFRVRKKAALTFMVPTLTLEKLEGVSGPLFTIEPQGSVEMNADQWVPPPENGTEMHTKEKIRAMR-----------------------DRLPY----SSSDRPPTTT-------------------------IYSCEQFPFDRNPVVGVLIIEGNIVCKNKRTLVVSERAYLFSHMDEVHLEGVHFIVEENAALGIAVATLHVEKLEGDSGEIFTIDPGGFLGGHADHLRPLPENGTK----SPFSPDRSAEYTYEQRLGLNPTHLMILALADSGQATDD 1005
            +D++  S L+SCD+L +  T V G+   +++   ++C E R +EV+ N   +S  P L  KGV F VR+  +L F +PT+ LE LEG SG +FT+EPQG++ ++AD ++P PE+ T++     +RA                         D+ P     + SD+P   T                         + SC+Q  FDRNP  G + + G+I+C+  RT+V+ E+AY+ S +  +  +G+ F V E+A    AV T+ +E LEG S  IFT++  GFL  +AD   PLPE+ T     S       A+  +E  +G   + + ++++ D      D
Sbjct:  695 IDNIVASNLNSCDDLTAGWTPVYGI---VVVTDHVICQEARTIEVSKNAYFISKIPTLWFKGVTFYVRETGSLKFGIPTMHLETLEGQSGGIFTVEPQGALGLHADSFIPFPEDSTDVDAHSLVRAKEGAKLNFEAAVRYTAVSITVVSTPDQNPQRDNSTPSDQPYLATTGGDTITTAATNQGLLAVDGVQSLLLVSCDQLEFDRNPFYGRVSVRGDIMCQEPRTIVIDEQAYIVSMLPNLRFKGISFHVRESAVARFAVNTMRLETLEGQSEGIFTVERQGFLAMNADGFIPLPEDSTDEDTHSLVRAKEGAKTRFEAAVGYTTSSITVVSMPDQDPQRHD 1034          
BLAST of Ec-28_000750.1 vs. uniprot
Match: D8LLQ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ1_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 3.820e-36
Identity = 83/166 (50.00%), Postives = 111/166 (66.87%), Query Frame = 1
Query:    1 MYYTDSSVMVVRE-SKSKNGNNSAKXXXXXXXXXXXXXXXDSTRRSLRVVDDVPLSTLHSCDELRSKRTRVQGVAGALLLDFDIVCPEKRVLEVTDNLLIMSNKPDLRLKGVHFRVRKKAALTFMVPTLTLEKLEGVSGPLFTIEPQGSVEMNADQWVPPPENGTE 495
            MYYTDS+V VV E S  KN N+   X                  +       + LS    C+ELR +RT V+G++G LLLD D++C EKR+LEV  +++++S+KPDLRLKGVHF V++KA+LTF+V T+ LEKLEG SG LFT+EPQG + M+AD+W P P+NGTE
Sbjct:   54 MYYTDSAVFVVVEPSTDKNDNSXXXXEAAGGSQGHSAGLAQEQLQRELEASGLDLS----CNELRFERTPVEGMSGVLLLDDDVMCKEKRILEVGHHVIVVSDKPDLRLKGVHFVVQEKASLTFIVATMVLEKLEGESGELFTVEPQGVLAMSADKWSPSPDNGTE 215          
BLAST of Ec-28_000750.1 vs. uniprot
Match: D8LLQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ0_ECTSI)

HSP 1 Score: 151 bits (382), Expect = 8.880e-35
Identity = 77/122 (63.11%), Postives = 98/122 (80.33%), Query Frame = 1
Query:  133 SLRVVDDV-PLSTLHSCDELRSKRTRVQGVAGALLLDFDIVCPEKRVLEVTDNLLIMSNKPDLRLKGVHFRVRKKAALTFMVPTLTLEKLEGVSGPLFTIEPQGSVEMNADQWVPPPENGTE 495
            +L VVDDV PL TL SCDELR +RT VQGV+G LLLD DI+C E+R+LEV  +++++S+KPDLRLKGVHF V +K +LTF+V T+ LEKLEG SG LFT+EPQG + ++AD   P P+NGTE
Sbjct:  426 TLAVVDDVLPLYTLESCDELRFERTPVQGVSGVLLLDDDIICREERILEVDHDVIVVSDKPDLRLKGVHFVVHEKVSLTFIVATMVLEKLEGESGELFTVEPQGVLAISADMGSPSPDNGTE 547          
BLAST of Ec-28_000750.1 vs. uniprot
Match: D8LN98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN98_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 1.560e-27
Identity = 165/567 (29.10%), Postives = 250/567 (44.09%), Query Frame = 1
Query:  145 VDDVPLSTLHSCDELRSKRTRVQGVAGALLLDFDIVCPEKRVLEVTDNLLIMSNKPDLRLKGVHFRVRKKAALTFMVPTLTLEKLEGVSGPLFTIEPQGSVEMNADQWVPPPENGTEMHTKEKIRAMRDRLPYSSSDRPPTTTIYSCEQFPFDRNPVVGVLIIEGNIVCKNKRTLVVSERAYLFSHMDEVHLEGVHFIVEENAALGIAVATLHVEKLEGDSGEIFTIDPGGFLGGHADHLRPLPENGTKSPFSPDRSAEYTYEQRLGLNP-THLMILALADSGQAT---DDKVLHMMARSERLRVWQKETATDM-EVDLEKCARGFDELLRAKKRERDLQMXXXXXXXXXXXKTTMPQQQADPTTAAVH------------------------SSDPKQEHAGQDASSTXXXXXXXXXXXXXXXXXXVPATVTRYWGDEARRXXXXDVALKVTNTGDVLVTVGDLVVVQKRNPMWTKKKE--------SWLQRKVAKSKPVKKIKDVFGRLGRRGKGNGKTDNKARSDXXXXXXGNGDGAPVSTMYSLHVVENGLEVRLEGVFMWGW 1734
            ++  P   +HSCDELRS  TR++GV   LL+  D+VC E+R+LE+TD L+I+S KP L L+GV F V++ A L F V  + +E+LEG SG +FT+EPQG V ++A+   P P++G+E+   E++R                        FP     + G  I+   +      +L++S R    +  DE+                       V+  E      F  +   F+ G                 +PD      Y+   G++P   L +LA AD  QA     D+ +   AR + L    +ETA  + E+D +      ++ LR +K++ D+  XXXXXXXXXXX                                         S   +  + G ++ +T                   P T   Y+GD        D+ L+VT TGDV+VTVG  +VV+KRNP   + ++        +WL+R++ K+ P+       GR+ RR         + R +       NG    VS  YSLHVV+ G EV+L+GVF+WGW
Sbjct:  242 IEKSPSQKIHSCDELRSNGTRLEGV---LLITGDVVCQEERLLEITDELIILSEKPVLYLEGVRFHVKQNATLRFGVSAMHVEQLEGGSGAIFTVEPQGYVGLHANGQGPVPQDGSEVG--EELR------------------------FPSSMATLDGEYIMTMGV----DGSLLLSGRQRYDAFHDEM-----------------------VQAAENQPWREFDTET--FVSG----------------LNPD------YD---GVDPRADLKVLAAADPAQAMRSIHDR-MQRTARPKALENQGEETADGVAEIDGK-----LEDFLRERKKKSDVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRGSCTSRSSNNGDESEATAVMAKNGPSIP--------PPT---YFGD--------DIVLQVTKTGDVVVTVGGRIVVEKRNPFARQAEKLDPSGGRGNWLERQLWKANPLA----TLGRIIRR--------RRLRREGKSSGGSNGIDENVSFGYSLHVVQKGFEVQLDGVFVWGW 688          
The following BLAST results are available for this feature:
BLAST of Ec-28_000750.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7G9F6_ECTSI9.160e-261100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G9G6_ECTSI3.100e-14248.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G9F5_ECTSI1.250e-6997.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L8D9_9PHAE5.220e-5237.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLS3_ECTSI3.390e-4633.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LLQ5_ECTSI2.270e-4434.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LLQ3_ECTSI7.120e-4031.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LLQ1_ECTSI3.820e-3650.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LLQ0_ECTSI8.880e-3563.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LN98_ECTSI1.560e-2729.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:719342..727945 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length1746
Hectar predicted targeting categoryother localisation
Gene idEc-28_000750.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_000750Ec-28_000750Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_28 719342..727945 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000750.1Ec-28_000750.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_28 719342..727945 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000750.1.1Ec-28_000750.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 719342..719608 +
Ec-28_000750.1.2Ec-28_000750.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 719954..720088 +
Ec-28_000750.1.3Ec-28_000750.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 720603..720695 +
Ec-28_000750.1.4Ec-28_000750.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 721610..721777 +
Ec-28_000750.1.5Ec-28_000750.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 722245..722379 +
Ec-28_000750.1.6Ec-28_000750.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 722846..722938 +
Ec-28_000750.1.7Ec-28_000750.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 723831..723905 +
Ec-28_000750.1.8Ec-28_000750.1.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 726029..726290 +
Ec-28_000750.1.9Ec-28_000750.1.9Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 726751..726953 +
Ec-28_000750.1.10Ec-28_000750.1.10Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 727631..727945 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000750.1CDS:Ec-28_000750.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_28 719342..719608 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-28_000750.1 ID=Ec-28_000750.1|Name=Ec-28_000750.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=582bp
MYYTDSSVMVVRESKSKNGNNSAKSNTDTGTTDTSNSDTDSTRRSLRVVD
DVPLSTLHSCDELRSKRTRVQGVAGALLLDFDIVCPEKRVLEVTDNLLIM
SNKPDLRLKGVHFRVRKKAALTFMVPTLTLEKLEGVSGPLFTIEPQGSVE
MNADQWVPPPENGTEMHTKEKIRAMRDRLPYSSSDRPPTTTIYSCEQFPF
DRNPVVGVLIIEGNIVCKNKRTLVVSERAYLFSHMDEVHLEGVHFIVEEN
AALGIAVATLHVEKLEGDSGEIFTIDPGGFLGGHADHLRPLPENGTKSPF
SPDRSAEYTYEQRLGLNPTHLMILALADSGQATDDKVLHMMARSERLRVW
QKETATDMEVDLEKCARGFDELLRAKKRERDLQMEKEEEEEKEAEKTTMP
QQQADPTTAAVHSSDPKQEHAGQDASSTSTSTSTSGRGKTKAKAKAVPAT
VTRYWGDEARRYWGDDVALKVTNTGDVLVTVGDLVVVQKRNPMWTKKKES
WLQRKVAKSKPVKKIKDVFGRLGRRGKGNGKTDNKARSDDDDDSKGNGDG
APVSTMYSLHVVENGLEVRLEGVFMWGWYAE*
back to top

spliced messenger RNA

>Ec-28_000750.1 ID=Ec-28_000750.1|Name=Ec-28_000750.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1746bp|location=Sequence derived from alignment at chr_28:719342..727945+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGTACTACACCGACTCCTCGGTGATGGTTGTACGTGAGAGCAAGAGCAA
GAACGGCAACAACAGCGCCAAGTCCAACACCGATACCGGCACCACCGACA
CCTCCAACAGCGACACCGACAGTACACGCCGGTCCCTTCGCGTCGTCGAT
GACGTCCCGCTCTCCACTCTGCACTCGTGCGACGAGCTCCGGTCCAAGCG
AACGCGCGTCCAAGGCGTGGCTGGCGCGCTTCTCCTGGACTTCGACATCG
TGTGCCCGGAGAAAAGGGTGCTGGAAGTCACAGACAATCTGCTCATCATG
TCCAACAAGCCCGACCTGCGCCTCAAGGGCGTGCACTTCCGTGTACGGAA
GAAGGCCGCCTTGACATTCATGGTGCCCACGTTGACGCTGGAAAAACTCG
AGGGGGTATCCGGACCGCTCTTCACCATCGAACCTCAAGGTTCCGTGGAA
ATGAATGCAGACCAGTGGGTCCCACCGCCCGAGAATGGAACGGAGATGCA
CACGAAGGAAAAGATAAGGGCCATGAGGGACCGTCTTCCCTACAGCTCCT
CGGATCGTCCCCCCACCACGACCATCTACTCGTGCGAGCAGTTCCCCTTC
GACCGCAACCCCGTAGTGGGCGTCCTGATCATCGAGGGCAACATCGTCTG
CAAGAATAAGCGGACGCTAGTAGTGAGCGAGCGAGCTTACCTCTTCTCGC
ATATGGACGAAGTGCACCTCGAGGGCGTCCACTTTATCGTGGAGGAGAAC
GCCGCCCTGGGCATCGCCGTGGCCACGCTGCACGTGGAGAAGCTCGAGGG
AGACTCCGGCGAGATCTTCACCATCGATCCAGGAGGGTTTCTGGGCGGGC
ACGCCGATCATTTGCGCCCGTTGCCTGAGAACGGCACCAAGTCCCCCTTC
TCGCCGGACAGATCCGCCGAGTACACCTACGAGCAGCGGTTGGGCTTGAA
CCCGACCCACCTCATGATCCTGGCCCTTGCCGACTCGGGCCAGGCCACCG
ACGACAAGGTTCTCCACATGATGGCGCGCTCGGAGAGGCTAAGGGTGTGG
CAGAAAGAGACGGCCACGGACATGGAAGTCGACCTGGAGAAATGTGCGAG
GGGCTTCGACGAGCTGCTTCGCGCGAAGAAGAGGGAGAGGGACCTTCAGA
TGGAGAAAGAGGAAGAGGAGGAGAAGGAGGCGGAGAAGACAACGATGCCG
CAGCAGCAGGCAGACCCGACGACCGCAGCAGTCCACTCCAGCGACCCGAA
GCAGGAACACGCCGGTCAAGATGCCTCCAGCACCAGCACCAGCACCAGCA
CCAGCGGTCGCGGCAAGACCAAGGCCAAGGCCAAGGCCGTTCCCGCCACT
GTGACGAGATATTGGGGTGACGAGGCGAGGAGGTATTGGGGAGACGACGT
GGCTCTGAAGGTCACCAACACCGGGGACGTGCTGGTGACCGTCGGTGATC
TCGTCGTCGTGCAGAAAAGAAACCCCATGTGGACCAAGAAGAAGGAGAGC
TGGCTGCAGAGGAAGGTGGCCAAGTCAAAGCCGGTCAAGAAGATCAAGGA
CGTCTTCGGGCGTCTCGGCCGCCGCGGCAAGGGCAACGGCAAGACCGACA
ACAAGGCCAGAAGCGACGACGACGACGACAGCAAAGGCAATGGCGACGGT
GCCCCCGTCAGCACCATGTACTCCCTCCACGTCGTCGAGAACGGGCTCGA
GGTCCGACTCGAAGGCGTGTTCATGTGGGGGTGGTACGCCGAGTGA
back to top

protein sequence of Ec-28_000750.1

>Ec-28_000750.1 ID=Ec-28_000750.1|Name=Ec-28_000750.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=582bp
MYYTDSSVMVVRESKSKNGNNSAKSNTDTGTTDTSNSDTDSTRRSLRVVD
DVPLSTLHSCDELRSKRTRVQGVAGALLLDFDIVCPEKRVLEVTDNLLIM
SNKPDLRLKGVHFRVRKKAALTFMVPTLTLEKLEGVSGPLFTIEPQGSVE
MNADQWVPPPENGTEMHTKEKIRAMRDRLPYSSSDRPPTTTIYSCEQFPF
DRNPVVGVLIIEGNIVCKNKRTLVVSERAYLFSHMDEVHLEGVHFIVEEN
AALGIAVATLHVEKLEGDSGEIFTIDPGGFLGGHADHLRPLPENGTKSPF
SPDRSAEYTYEQRLGLNPTHLMILALADSGQATDDKVLHMMARSERLRVW
QKETATDMEVDLEKCARGFDELLRAKKRERDLQMEKEEEEEKEAEKTTMP
QQQADPTTAAVHSSDPKQEHAGQDASSTSTSTSTSGRGKTKAKAKAVPAT
VTRYWGDEARRYWGDDVALKVTNTGDVLVTVGDLVVVQKRNPMWTKKKES
WLQRKVAKSKPVKKIKDVFGRLGRRGKGNGKTDNKARSDDDDDSKGNGDG
APVSTMYSLHVVENGLEVRLEGVFMWGWYAE*
back to top

mRNA from alignment at chr_28:719342..727945+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-28_000750.1 ID=Ec-28_000750.1|Name=Ec-28_000750.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=8604bp|location=Sequence derived from alignment at chr_28:719342..727945+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTACTACACCGACTCCTCGGTGATGGTTGTACGTGAGAGCAAGAGCAA GAACGGCAACAACAGCGCCAAGTCCAACACCGATACCGGCACCACCGACA CCTCCAACAGCGACACCGACAGTACACGCCGGTCCCTTCGCGTCGTCGAT GACGTCCCGCTCTCCACTCTGCACTCGTGCGACGAGCTCCGGTCCAAGCG AACGCGCGTCCAAGGCGTGGCTGGCGCGCTTCTCCTGGACTTCGACATCG TGTGCCCGGAGAAAAGGGTGAGCGAGCGTGTACAGTATTGGTTTTGCAAC GCTGTGTTGTTGTTGTTGTCCCATTCCCCACGACCCTTGAGTGCGGTGGC AACGTCTTTCTTCTCGTCTCTCTTCGTTTCTTTCTTTTATCTGCCTCTCT CTCTCCCTCTCTCTTTCGTCCACGCCTTTGGAGTTTTCCGAGAGACGAGC TGGGGTGTAGGTAGATAAGTATACATCGTTCCAGAGTGCCCGCCCAGTAT TGACATCGAGTACATATCCAACCATTTAAAACATGAGTGGCGTTCGTCCC TTGTCCAATGTGGTCCCCTGTCCCCTGCTGGGTCGCCTTTGCACTCTGCC TGAATACCGCAGGTGCTGGAAGTCACAGACAATCTGCTCATCATGTCCAA CAAGCCCGACCTGCGCCTCAAGGGCGTGCACTTCCGTGTACGGAAGAAGG CCGCCTTGACATTCATGGTGCCCACGTTGACGCTGGAAAAACTCGAGGTG CGCACGTGCTTGAGGAATCTGGAGGTGCTTTTGCTTGCGGGAATACCGGA AAGCTTGGCATGGGGTGTATCGGTAGCGGTGTTGCGGGGATCCTTCAGTT TTGTTATTTGCATGTGGTGAAAGATGTTATGTATGTTTGGGTACAAAAAC GTCTGAACGTCTCACTCAGGGGGGCGGGGCACCCCTCCCTCGCGTACTGG TGAAAAACAAGTTTCGACTTCGTGGGATTGTTCCTTGCCGTGTTGGTTAA TCCCAACCGTTTGGACTCACAGTGGCAGAGCGGTATGCCCACCGGGTTCT CTCCCTCTTCCCTCTCTTCTTTCCGAGAAAACCCAGGAAAAAAAGTGGGA ACTATGAGGCAGGTAGGAAGAAAGCAACACAGAGAGGGGGGGGCTGGCTG TGTTTTTTTTTTTTTTTTGCTGGTGGTGGCGATAGCGAGGTTGCTTGTCC ACGACAGAACGAAACGTTCCTCAGACGAAGCTTAAGTGTTGCTGTTCTTT CCGCCGCGCAGGGGGTATCCGGACCGCTCTTCACCATCGAACCTCAAGGT TCCGTGGAAATGAATGCAGACCAGTGGGTCCCACCGCCCGAGAATGGAAC GGAGGTAAGCACAGGGCGTTATGTTGGCAGCAATGCTTCTTGCTTGTTGT TTCTGTCAATAATGATGCTTCGGCTTTGTGGTTGTCGCTCTGTTGCAGGC ACTTGTGGCACCGGTTTTTTCCAGACAGGTCGCATGTTTCGGTGTTTTTG GTCGTCTTCACAAGCTGACATCGGCCAAACAATTGCAATTTTTCACGCGT TGCAGTGATCGCCATCGCCCTTGTGATGTGGGTTCATGAGCGAGTTCATA ACCCCTCCGACCGTATTCAGCCCCTGTTGGCAGGGGCGTCACTGGATGTT CTGAGTTCGCCCATCACATACAAGAAGGGTTTCACTGAGCTTGCAGACCA GACGACCCACAACCATCTCACCCCCCCCACCCTTCTCTTACCCCGGTTCC CTTAATTCTGTATTCTTCCTCCCTCCGCTCTCGATGCCAATCACCGGGCG AAGGAGGACGTATTCTCTCTCGTCGCCGTAAAGAAGGGGGCAAGCTTCGA GCTGGAAGAAGGCCACGCCCGCTACAAGGCCTCGACCATCACGTTCTTCA TGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGAACGACAAC ATTGACAACGACAAGCTGGGCAATTCACGATCCACCGCCGTGGAGCCCCC CCATTCCACTGCCGACATCATCGAGAAGCAGCAGCAGCAGCAGCAGCAGC AGGACAACAGCAACAACCCGAGCATGTCACGATCCACCGCGGAGCCCCTC CATTCCACTGCTGATACCAACGAGCAGCAGCGGCAGCAGCAGCAGCAAAA GGGCGACGTTCTCCCTCAGCACCCCCAGAGCGGGGACAACAACAACAACA ATAACAACAACAACAATCCCCCCCTTACCGCCAGCGGTGATGCCGACTCC TACCGTGGCAACACGAACATGCACACGAAGGAAAAGATAAGGGCCATGAG GGACCGTCTTCCCTACAGCTCCTCGGATCGTCCCCCCACCACGACCATCT ACTCGTGCGAGCAGTTCCCCTTCGACCGCAACCCCGTAGTGGGCGTCCTG ATCATCGAGGGCAACATCGTCTGCAAGAATAAGCGGGTGAGATGGTGCTC TAGTGTTGTCCTCCGTTAACATGCATGCTTCAGAAGAGCGTGGGTATTGC GACCCCCCTTCCGAATCCCGCGTTCTTTCCGGGGTCCCTTGTGCAGTACG TACGGGACACGTGTGGCACAGAGAATTTTGACTTCACGGGAGTACCGTGT TTTATGATATGAACGTTGACATAACTGGCTCATCAATCCCCACCCCCATG AGTACACCGCCTCACTGTTGGATTACATTAAATTTCTTGTTTTCTCCGCA ATGATTAAGAGGAGAATGGCAATCGTTGCCCAGACGCGGAAAGGGTGGTA TTGGTACACTTGAGCGGAATGATACCTCCGTAGCAACGCCTACTCTATAG AAGCATCGGACCAGCGTTAGCAACGACTCATCGTCTCTTTTGCCGTGTTT TCCTTTGCCGTCCTTTTCCCGCTGCGGCTCATCGATAACAACCAATGCCT CAGACGCTAGTAGTGAGCGAGCGAGCTTACCTCTTCTCGCATATGGACGA AGTGCACCTCGAGGGCGTCCACTTTATCGTGGAGGAGAACGCCGCCCTGG GCATCGCCGTGGCCACGCTGCACGTGGAGAAGCTCGAGGTATGGTCATTG GTGGGTCTGTGTGTGTCGTCTCGTCTTGTGTAGGTTGGGTTCGTGAGTGT ATAGTCTGAGCGTGCGAGAACGTCACGACGAAAAGCAGAGGGAGGGAGGG GGGGGGGGGGAGATGGCCGCATTCTCCATCCCGAAAGAACGGGGTCAGCT TCGAAGTTGTATTGTGGAGGCATGGTAGTCTTTTGGCGGCAAGAAACACG ATCGAAAACAACCGCGGTGTCCTGGAGGGAGGTTGCAGCATCCATCGTGT ATCGTCTGTCATGGGAGTGAGCTCGTAGACGATTCCTCATGTTGCTGGTG ATGTTGGCACCGTTGTTCCTATTGCTGGAGGCGGCGGCAACCATGGTGAT GCCACTTCTTTCTGTTGTTGTGACTGCAATGAACCGATGTTATTGTTGTT GTTGCTGTTGCTGCTGCTGCTGTTGCTGCTGTTGTGTCCTTCCTCACCGT TCAGGGAGACTCCGGCGAGATCTTCACCATCGATCCAGGAGGGTTTCTGG GCGGGCACGCCGATCATTTGCGCCCGTTGCCTGAGAACGGCACCAAGGTG GGAACGGTGTCGTGTTGATACGATACGATGTTGTTATTCTTGTTTTGATG TTGTCCAATCGTTATGTCGTAGTTATGGCAATGTCGCTGTTTTCACCATT ATACTACACGACTCCATTGCTTTGCGGGGTTGGTGTTTAGTGCCAACAGG CCGCTAACGTGTACCCCCCCCCCCGCCGTTCATGCTGTTGGACACAATTC CTGACAGGATGTCGCATGATTGATATTGTTTTCCCACCACTCCGTTGAAG CCTAGGGGAGATGAAAATTATCCCTCGCGCACGTTGATTCCACGCCGACC TTTTAAGTCAGATCAACCCCCCGTCAAGCTTGAACACCTGCTTGGAAGAC GAAGATGTCGAGAGGGTCGTGTGTGATAAATACACTGTTCTTGGCACGAC ACGTCAGCTCTCTTCTAGGCCTACAAACAACAGCAACGTCACCCGACGGT TTTTCCGTCGATGGCGTGGCCCAACCAATAACAACCTTCGACCATATACT TGCTATATTAGGGCCCTTCCTCGCTCTCTCCCCCCCCCCTCTCATTGTTT CTCGTCCCCGCGCTGTCTCCGTCTCTGCCACGACCCGAACCGCCACAGAA GGACGAGCACTCGCTGCTGCACGCAAAAGAGGGAGGCGAGTTTCATTTGG AAGCCCTGGTCCTGTACACATCCTCCTCCATCACGATGGTCACGGAGCCT GTCATCGAGGATCCGGCCTGGATAAGGCTGCAACGCCTCCGCCGGCGGTG GATTGAACGGCACTTCCAGCTTCACCAGCAGCAGGGGAAGCAGCAGCAGC AGCAGCAGCAACAGCAACAGCAGATGAAACACGATGGAGGCCAGAGCGCT TGCACAGCAGCCGCTTCTCTGACGTGTGGACCAAACCAGTCCCCCTTCTC GCCGGACAGATCCGCCGAGTACACCTACGAGCAGCGGTTGGGCTTGAACC CGACCCACCTCATGGTGAGGACAAGGAATGAATGTCTGATGGGTTAGAGT TTTTGAGAACGGCCGCTGGCTGTAGGAGTTCCTGAGCCTGACGAGCGCAG AGCAGCAAATGCTGGTGTTGGCTTGGGCTCTCAATGGAACCCCCCCCAAC AAAACTTCAGAAGATGAGGAACTCCATCCTTTCATCCCTATCGTATCGTA TCGTATCGAGGGGGGGTCGTCGGTGTGCGATCTTCTGACTCGGCAACCCC TCAAGGTTGCCATTATTTGAGGAGGTTGCGTGTATCCCCGCGAGGTTGGC AGCCTTTGGGGCAGGGAGGGGACAAGGTGGTGTGCCAGGGTGGAGGAGTG TATTTAAAGCTGCCGATCGACGTTCATTTCGTACCGGGACTTAGTACAGC TGCGGCCGTGGGATCATGAGCAAGGGTTGGCTGTTGTCCCTGTCTGAAGA TTCTCTGCAATATTCCCGGCATTTGTCACTTCATGTTGTCCTTGAAAAAT GGTATATTTTGCTTCTATTTTGTGTTCGTCTCCTGACCACCTCTCACCAC GCCACCGATTGTACCTGTTTTAGTCTTGTCCATCCCGTGGGACCTCCGAT AGCGCGACCGTTTTGTGTAACAGCAGAAACATGGGCAGGAACAAAATTCC TGCTGTCTCTGTTGTTTGTGAGAAACATGTCGAGGATGGTGTCGTTGTGA ATCGGTTCTCCGTCGATTGGTATGCCTACGTGTNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNACGGGGGGGACCCGGGCTTGGAGTTGAAGATCCTGGCCCTTG CCGACTCGGGCCAGGCCACCGACGACAAGGTTCTCCACATGATGGCGCGC TCGGAGAGGCTAAGGGTGTGGCAGAAAGAGACGGCCACGGACATGGAAGT CGACCTGGAGAAATGTGCGAGGGGCTTCGACGAGCTGCTTCGCGCGAAGA AGAGGGAGAGGGACCTTCAGATGGAGAAAGAGGAAGAGGAGGAGAAGGAG GCGGAGAAGACAACGATGCCGCAGCAGCAGGCAGACCCGACGACCGCAGG TACAGATACCTCCAAGGAACGCGTCTCCCCCCCCCCCGAAGGGAGAAAAG TGTTTGATTTATCCCAGGCACCTGAGTTGTCAATTGGTACATGTACAGGC ACGTCAAGTGCATCCATCTCTCGAAAGTCGCCGTTTCCGGGTAGGGAGGT TTTCTAGATAGGGTATGGGAGTAGGTGATGTCGTCAAGAGCTCGTCGTGC CTTGACGTGCGCGTTGCCGCCGATCTCTCCAGTAGAACAACACCTACCTA CCCTGTTCATGTTTCCATTCTCCAGCTGCCAAACATTGCTGCCATCGTGA GCTGCGCGGAGGGCCCCGACTTCTCAGATTCGCTGGCACACAGAGGTCCA CGCTCCTCTCTACGATAGAGACCTTTCACACATTATCGCTAGATGGCGTG TTTCGGCGGGCTTTGTTTAGTGTTTGCCTCTTTTCCCGACGAAACTCGAT CTTGAACAGCAGTCCACTCCAGCGACCCGAAGCAGGAACACGCCGGTCAA GATGCCTCCAGCACCAGCACCAGCACCAGCACCAGCGGTCGCGGCAAGAC CAAGGCCAAGGCCAAGGCCGTTCCCGCCACTGTGACGAGATATTGGGGTG ACGAGGCGAGGAGGTATTGGGGAGACGACGTGGCTCTGAAGGTCACCAAC ACCGGGGACGTGGTGAGTTGGGTGTACTGAGCAGGAAGACAATGCAACAG CGTTTGGTGGGAAGGTGCGATGGGTGATTGGGTGATCCCACAGGGTGATC CCATTGGTCTATCGTCAGAGGACAGCCGAAGCGTTTTTGTTTGGCCTCGA ACTCTACTGTAGGTGTACGTCGGGCTTCACGGCCAGAAAGCACGTGGCAC CGATTTGAACATGAAACACCAACACCATCTGCGTGCGTAGATTACTGCGG TTGATTTAGCGTGCGTAAGAGAAATGCCATTCTGTGTGTGTATCGTGATT CGTCGAAGGACGTTCTACCAACCCCATCACCTTTCTTACTGCCTGCATAG GTTCTATTCCGACACGAAGGCCCGGTGTTTGTCGTCTTGATTCACTTGGC AATATCTCGCCCTTTGCTTTACCTACCGTATCTTCCAAGCGTACTGCAGG CCCAAGTGTTCGGCAGGACATGAACTACAGTAAACATGGCCCACACTGCT GTTCATCGTCCGTGTGTGTTTTTCATTTTGCCTTTTGACCAAGTCCTCCT GGTTACCAGAAAACAACGCCCTCTTTCTGTTACGTCCGTGTAGTGCATTG TGCCTAGTCCATGCTTCATGACATGTTCTTTGATCATCGTGCTTACAGCT ATCCTTTTTGCTCCATTGCATCGCTGCCTACTTGCCCAGCTGGTGACCGT CGGTGATCTCGTCGTCGTGCAGAAAAGAAACCCCATGTGGACCAAGAAGA AGGAGAGCTGGCTGCAGAGGAAGGTGGCCAAGTCAAAGCCGGTCAAGAAG ATCAAGGACGTCTTCGGGCGTCTCGGCCGCCGCGGCAAGGGCAACGGCAA GACCGACAACAAGGCCAGAAGCGACGACGACGACGACAGCAAAGGCAATG GCGACGGTGCCCCCGTCAGCACCATGTACTCCCTCCACGTCGTCGAGAAC GGGCTCGAGGTCCGACTCGAAGGCGTGTTCATGTGGGGGTGGTACGCCGA GTGA
back to top

Coding sequence (CDS) from alignment at chr_28:719342..727945+

>Ec-28_000750.1 ID=Ec-28_000750.1|Name=Ec-28_000750.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1746bp|location=Sequence derived from alignment at chr_28:719342..727945+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTACTACACCGACTCCTCGGTGATGGTTGTACGTGAGAGCAAGAGCAA
GAACGGCAACAACAGCGCCAAGTCCAACACCGATACCGGCACCACCGACA
CCTCCAACAGCGACACCGACAGTACACGCCGGTCCCTTCGCGTCGTCGAT
GACGTCCCGCTCTCCACTCTGCACTCGTGCGACGAGCTCCGGTCCAAGCG
AACGCGCGTCCAAGGCGTGGCTGGCGCGCTTCTCCTGGACTTCGACATCG
TGTGCCCGGAGAAAAGGGTGCTGGAAGTCACAGACAATCTGCTCATCATG
TCCAACAAGCCCGACCTGCGCCTCAAGGGCGTGCACTTCCGTGTACGGAA
GAAGGCCGCCTTGACATTCATGGTGCCCACGTTGACGCTGGAAAAACTCG
AGGGGGTATCCGGACCGCTCTTCACCATCGAACCTCAAGGTTCCGTGGAA
ATGAATGCAGACCAGTGGGTCCCACCGCCCGAGAATGGAACGGAGATGCA
CACGAAGGAAAAGATAAGGGCCATGAGGGACCGTCTTCCCTACAGCTCCT
CGGATCGTCCCCCCACCACGACCATCTACTCGTGCGAGCAGTTCCCCTTC
GACCGCAACCCCGTAGTGGGCGTCCTGATCATCGAGGGCAACATCGTCTG
CAAGAATAAGCGGACGCTAGTAGTGAGCGAGCGAGCTTACCTCTTCTCGC
ATATGGACGAAGTGCACCTCGAGGGCGTCCACTTTATCGTGGAGGAGAAC
GCCGCCCTGGGCATCGCCGTGGCCACGCTGCACGTGGAGAAGCTCGAGGG
AGACTCCGGCGAGATCTTCACCATCGATCCAGGAGGGTTTCTGGGCGGGC
ACGCCGATCATTTGCGCCCGTTGCCTGAGAACGGCACCAAGTCCCCCTTC
TCGCCGGACAGATCCGCCGAGTACACCTACGAGCAGCGGTTGGGCTTGAA
CCCGACCCACCTCATGATCCTGGCCCTTGCCGACTCGGGCCAGGCCACCG
ACGACAAGGTTCTCCACATGATGGCGCGCTCGGAGAGGCTAAGGGTGTGG
CAGAAAGAGACGGCCACGGACATGGAAGTCGACCTGGAGAAATGTGCGAG
GGGCTTCGACGAGCTGCTTCGCGCGAAGAAGAGGGAGAGGGACCTTCAGA
TGGAGAAAGAGGAAGAGGAGGAGAAGGAGGCGGAGAAGACAACGATGCCG
CAGCAGCAGGCAGACCCGACGACCGCAGCAGTCCACTCCAGCGACCCGAA
GCAGGAACACGCCGGTCAAGATGCCTCCAGCACCAGCACCAGCACCAGCA
CCAGCGGTCGCGGCAAGACCAAGGCCAAGGCCAAGGCCGTTCCCGCCACT
GTGACGAGATATTGGGGTGACGAGGCGAGGAGGTATTGGGGAGACGACGT
GGCTCTGAAGGTCACCAACACCGGGGACGTGCTGGTGACCGTCGGTGATC
TCGTCGTCGTGCAGAAAAGAAACCCCATGTGGACCAAGAAGAAGGAGAGC
TGGCTGCAGAGGAAGGTGGCCAAGTCAAAGCCGGTCAAGAAGATCAAGGA
CGTCTTCGGGCGTCTCGGCCGCCGCGGCAAGGGCAACGGCAAGACCGACA
ACAAGGCCAGAAGCGACGACGACGACGACAGCAAAGGCAATGGCGACGGT
GCCCCCGTCAGCACCATGTACTCCCTCCACGTCGTCGAGAACGGGCTCGA
GGTCCGACTCGAAGGCGTGTTCATGTGGGGGTGGTACGCCGAGTGA
back to top
Synonyms
The feature 'Ec-28_000750.1' has the following synonyms
Synonym
Esi0098_0037
Esi_0098_0037