Ec-28_000680.3 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-28_000680.3
Unique NameEc-28_000680.3
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length489
Homology
[Close]
BLAST of Ec-28_000680.3 vs. uniprot
Match: D7G9E8_ECTSI (Two component sensor histidine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9E8_ECTSI)

HSP 1 Score: 650 bits (1678), Expect = 5.620e-216
Identity = 432/866 (49.88%), Postives = 447/866 (51.62%), Query Frame = 1 
Query: 1276 MVGSPEFVSLVKAQFEVLATVLGADRVVLYARRESTETGSLEFVPAMEYPERPPPAWSMDIDGVQMHEHHASSELLLPAAAGQEMNADSPDAVEGGDGDLSAPIVHSSLLLGMITVIKNGNSDGESRPPSARENAAPRDIENARVLWGERDKRLLETIARSVGVAAVLDQKQRWAAVMQVEPLRKVVAESLHQVKNPMTALRTFGKLLLRRLPQDDTLNRELAKDIILQSDRLVDILLPVDAVLGLLATAVEREREAQMPGMVDPHAAQREDVASTSAAXXXXXXXXXXXXXXVDSTVDGVQDALLSPPAPTGMEETVAYEMMPFGLLSVEDVIQPVTRAAQAAAKERCGGMSKGS*SNRNSGVVVVVMVPFVEVLGSQPPGVQTRLSGLHLTRCQFRIM*NLTRALSHVQLGCPPRSQGIGCGNFVRTLRALRLMIARTCATDGAVRAPAMLCAGHAALLRCCVRRAIVAAVTHRV*VCYCTASART*MTWQLTTHNAHYCIKTYELEHDL*PRLRTHTLRTMAPLSLQELEPQPRPKLEVSSSGHYLYPSGWRVSLPYRRLRASMVCTA*ASVPCVLRILIFVVYPRYPVECPWKRLAEMKQPSSFRSFSGSTDARRVCKSVTNLPWTGTATSVLIDAALRLHALPLFDT*RALLSSTT*GLFLHAALHASAFLRYNYGALLSSVTLSWFHVAGGSASGGGWTKIFPKSLATSGPWRGLVQRRGKRAKVLQDGARRGREGRRGSCDGGLEGPPERGTRVGSREGVVIEVVDNGPGIEAEDMPYIFDRGYRGRQPLQCGIPGTGLGLGIARDTMRSFGGDLEVVNMKRDTDGDGGAGGGLKDGGWGTGVKLYLPRGERRTSEGGG 3873
            MVGSPEFVSLVKAQFEVLATVLGADRVVLYARRESTETGSLEFVPAMEYPERPPPAWSMDIDGVQMHEHHASSELLLPAAAGQEMNADSPDAVEGGDGDLSAPIVHSSLLLGMITVIKNGNSDGESRPPSARENAAPRDIENARVLWGERDKRLLETIARSVGVAAVLDQKQRWAAVMQVEPLRKVVAESLHQVKNPMTALRTFGKLLLRRLPQDDTLNRELAKDIILQSDRLVDILLPVDAVLGLLATAVEREREAQMPG                                       VQDALLSPPAPTGMEETVAYEMMPFGLLSVEDVIQPVTRAAQAAAKER                                             R  FR                                                                                                                                                           WRV                  +P V+                                    D R + ++++N+          ++ AL+                               F +   G              GG   G   T +    L+    W                                           G+  GVVIEVVDNGPGIEAEDMPYIFDRGYRGRQPLQCGIPGTGLGLGIARDTMRSFGGDLEVVNMKRDTDGDGGAGGGLKDGGWGTGVKLYLPRGERRTSEGGG
Sbjct:    1 MVGSPEFVSLVKAQFEVLATVLGADRVVLYARRESTETGSLEFVPAMEYPERPPPAWSMDIDGVQMHEHHASSELLLPAAAGQEMNADSPDAVEGGDGDLSAPIVHSSLLLGMITVIKNGNSDGESRPPSARENAAPRDIENARVLWGERDKRLLETIARSVGVAAVLDQKQRWAAVMQVEPLRKVVAESLHQVKNPMTALRTFGKLLLRRLPQDDTLNRELAKDIILQSDRLVDILLPVDAVLGLLATAVEREREAQMPG---------------------------------------VQDALLSPPAPTGMEETVAYEMMPFGLLSVEDVIQPVTRAAQAAAKER---------------------------------------------RVGFR-----------------------------------------------------------------------------------------------------------------------------------------------------------WRVD---------------QDLPEVVG-----------------------------------DERALEEALSNV----------VENALK-------------------------------FCKMGRGE-------------GGKDGGVRATVVLRARLSAEPEW-------------------------------------------GAESGVVIEVVDNGPGIEAEDMPYIFDRGYRGRQPLQCGIPGTGLGLGIARDTMRSFGGDLEVVNMKRDTDGDGGAGGGLKDGGWGTGVKLYLPRGERRTSEGGG 480
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BLAST of Ec-28_000680.3 vs. uniprot
Match: A0A6H5JXI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXI6_9PHAE)

HSP 1 Score: 515 bits (1327), Expect = 3.840e-167
Identity = 283/310 (91.29%), Postives = 294/310 (94.84%), Query Frame = 1 
Query: 1414 MEYPERPPPAWSMDIDGVQMHEHHASSELLLPAAAGQEMNADSPDAVEGGDGDLSAPIVHSSLLLGMITVIKNGNSDGESRPPSARENAAPRDIENARVLWGERDKRLLETIARSVGVAAVLDQKQRWAAVMQVEPLRKVVAESLHQVKNPMTALRTFGKLLLRRLPQDDTLNRELAKDIILQSDRLVDILLPVDAVLGLLATAVEREREAQMPGMVDPHAAQREDVASTSAAXXXXXXXXXXXXXXVDSTVDGVQDALLSPPAPTGMEETVAYEMMPFGLLSVEDVIQPVTRAAQAAAKERCGGMSKGS 2343
            MEYPERPPPAWSMDI GVQ HEHHASSELLLPAA G EMNADSPDAVEGGDGDLSAPIV+SSLLLGM+TV KNGN DG++R PS REN+AP++IE ARVLW ERDKRLLETIARSVGVAAVLDQKQRWAAVMQVEPLRKVVAESLHQVKNPMTALRTFGKLLLRRLPQDDTLNRELAKDIILQSDRLVDILLPVDAVLGLLATAVERERE QM GMVDPHAAQRED A+TSA XXXXXXXXXXXXX  DSTVDGVQDALLSPP+PTGMEET+AYEMMPFGLLSVEDVIQPVTRAAQAAAKERCGG+SKGS
Sbjct:    1 MEYPERPPPAWSMDIHGVQTHEHHASSELLLPAATGHEMNADSPDAVEGGDGDLSAPIVYSSLLLGMMTVFKNGNGDGKARQPSTRENSAPKNIEEARVLWDERDKRLLETIARSVGVAAVLDQKQRWAAVMQVEPLRKVVAESLHQVKNPMTALRTFGKLLLRRLPQDDTLNRELAKDIILQSDRLVDILLPVDAVLGLLATAVEREREVQMSGMVDPHAAQREDFAATSAXXXXXXXXXXXXXX--DSTVDGVQDALLSPPSPTGMEETMAYEMMPFGLLSVEDVIQPVTRAAQAAAKERCGGISKGS 308
[Close]
BLAST of Ec-28_000680.3 vs. uniprot
Match: A0A6H5JWW5_9PHAE (Histidine kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW5_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 9.390e-51
Identity = 92/103 (89.32%), Postives = 93/103 (90.29%), Query Frame = 1 
Query: 3562 SREGVVIEVVDNGPGIEAEDMPYIFDRGYRGRQPLQCGIPGTGLGLGIARDTMRSFGGDLEVVNMKRDTDGDGGAGGGLKDGGWGTGVKLYLPRGERRTSEGG 3870
            +  GVVIEVVDNGPGIEAEDMPYIFDRGYRGRQPLQCGIPGTGLGLGIARDTMRSFGGDLEVVNMKRDTDGD       KDGGWGTGVKLYLPRGERR SEGG
Sbjct:   64 AESGVVIEVVDNGPGIEAEDMPYIFDRGYRGRQPLQCGIPGTGLGLGIARDTMRSFGGDLEVVNMKRDTDGDXXXXXXXKDGGWGTGVKLYLPRGERRRSEGG 166
[Close]
BLAST of Ec-28_000680.3 vs. uniprot
Match: A0A835ZFA0_9STRA (Two component sensor histidine kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFA0_9STRA)

HSP 1 Score: 191 bits (485), Expect = 9.960e-48
Identity = 120/261 (45.98%), Postives = 152/261 (58.24%), Query Frame = 1 
Query: 1285 SPEFVSLVKAQFEVLATVLGADRVVLYARRESTETGSLEFVPAMEYPERPPPAWSMDIDGVQMHEH-------HASSELLLP---------AAAGQEMNADSPDAVEGGDGDLSAPIVHSSLLLGMITVIKNGNSDGESRPPSARENAAPRDIENARVLWGERDKRLLETIARSVGVAAVLDQKQRWAAVMQVEPLRKVVAESLHQVKNPMTALRTFGKLLLRRLPQDDTLNRELAKDIILQSDRLVDILLPVDAVLGLLA 2019
            S E+ SLV+ QF++L T L   R  L  R+E+  TG LEF     YP +    W +D  G             + S+  LLP         +A G E +A    AVE  DG LSAP+++ SL++GM+TV ++    G     S                W   DK LLE +A S+ + A LDQ+QRWAA  QVE LR++++E+LHQ KNP+TALRTFGKLLLRRLP  D LNRELA+DIILQSDRLVD+LLPVD  LG LA
Sbjct:  108 SQEYASLVQTQFDLLVTALDVARCALGFRKENPATGELEFATIAVYPPKKR-VWVVDAQGRSEQRTGPLELPGYTSAAALLPQYPFVSVSLSADGLETSA----AVENTDGGLSAPLIYGSLVIGMLTVWRDTPPGGSG---SXXXXXXXXXXXXXGTQWRNADKELLEKVASSLAMGAALDQRQRWAAAAQVEELRRMLSETLHQAKNPLTALRTFGKLLLRRLPAADGLNRELAEDIILQSDRLVDLLLPVDDALGALA 360
[Close]
BLAST of Ec-28_000680.3 vs. uniprot
Match: A0A7S0NF57_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0NF57_9CRYP)

HSP 1 Score: 184 bits (468), Expect = 3.790e-45
Identity = 129/369 (34.96%), Postives = 190/369 (51.49%), Query Frame = 1 
Query: 1285 SPEFVSLVKAQFEVLATVLGADRVVLYARRESTETGSLEFVPAMEYPERP------------PPAWSMDIDGVQMHEHHASSELLLPAAAGQEMNADSPDAVEGGDGDLSAPIVHSSLLLGMITVIKNGNSDGESRPPSARENAAPRDIENARVLWGERDKRLLETIARSVGVAAVLDQKQRWAAVMQVEPLRKVVAESLHQVKNPMTALRTFGKLLLRRLPQDDTLNRELAKDIILQSDRLVDILLPVDAVLGLLATAVEREREAQMPGMVDP----HAAQREDVASTSAAXXXXXXXXXXXXXXVDSTV---------DGVQDALLSPPAPTGMEETVAY-EMMPFGLLSVEDVIQPVTRAAQAAAK 2313
            SPEF +L +AQFEVL+ +LGA + VLY RRE  +TG L+FVPA  YPE+             P +  +++ G        S+  + P     +  +     V   DG +S P+ + S++LGM+ V +    +                       W E D + LE IARS+ VA +LDQK +W   +Q E +RK+++E+LHQVKN ++A+R FGKLLLRRLP  D +NRELA+DI++QSDRLVD+LLP+D++     ++  R R+++  G   P     AAQRED   + A+                 TV         D   D  +      G E+  +  +  P  L  +EDV+ P+  A+QA A+
Sbjct:  117 SPEFNALCQAQFEVLSCILGASKCVLYFRREDAKTGQLDFVPAAVYPEKQRVWVVGEGPAGLPASGPIELPGF------FSANSMFPEYPFIKRQSSGIATVSLADGGISLPLEYGSVVLGMLAVWRENQKE-----------------------WQEADLKQLEAIARSLAVAVILDQKHQWQEAVQAESMRKMLSETLHQVKNSLSAVRMFGKLLLRRLPGSDKMNRELARDILIQSDRLVDLLLPIDSM-----SSPARLRQSRSSGHGKPLLLSSAAQREDARRSMASSMVILDDDELNELVGGPTVAERMQIESLDRSLDDAMETIRKGGNEQGESKSKSTPTKLCVLEDVLSPIISASQAIAE 451
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BLAST of Ec-28_000680.3 vs. uniprot
Match: A0A7S4DJM8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DJM8_HETAK)

HSP 1 Score: 172 bits (437), Expect = 7.640e-43
Identity = 97/249 (38.96%), Postives = 158/249 (63.45%), Query Frame = 1 
Query: 1285 SPEFVSLVKAQFEVLATVLGADRVVLYARRESTETGSLEFVPAMEYPE-------RPPPAWSMDIDGVQMHEHHASSELLLPAAAGQEMNADSPDA-VEGGDGDLSAPIVHSSLLLGMITVIKNGNSDGESRPPSARENAAPRDIENARVLWGERDKRLLETIARSVGVAAVLDQKQRWAAVMQVEPLRKVVAESLHQVKNPMTALRTFGKLLLRRLPQDDTLNRELAKDIILQSDRLVDILLPVDAVL 2007
            S E+  L +AQFEV++ +LGA+R  ++ R     TG+LEF P   +P        R  P+     +G +    ++++++LLP       + D  +A  +  DG L+  +++  + +G++ + K G  +       + ++ +  D E     W E+D R+L+ +A ++ +AAVLDQK+RW   MQ++ LR+ +AE+LHQVKNP+TA+RTFGKLLLRRLP +D+LNR+LA+D++ QSDRLVD+LLPVD+++
Sbjct:  116 SQEYSELCQAQFEVVSDMLGAERATVFLRAAHPLTGALEFRPVANFPRTRRRFIGRDGPSGLEAEEGPRELAGYSAADILLPTYPFMATSGDGCEACTKHADGGLTCTMIYGGMAVGVLAIWK-GEDEANFDNTLSNDDDSFID-EGCSANWSEKDCRMLQNVANTLALAAVLDQKERWEHQMQLDGLRRALAETLHQVKNPLTAVRTFGKLLLRRLPAEDSLNRQLARDLLTQSDRLVDLLLPVDSLV 362
[Close]
BLAST of Ec-28_000680.3 vs. uniprot
Match: A0A7S0YLT3_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YLT3_9CRYP)

HSP 1 Score: 162 bits (410), Expect = 8.320e-41
Identity = 102/255 (40.00%), Postives = 150/255 (58.82%), Query Frame = 1 
Query: 1285 SPEFVSLVKAQFEVLATVLGADRVVLYARRESTETGSLEFVPAMEYPERP------------PPAWSMDIDGVQMHEHHASSELLLPAAAGQEMNADSPDAVEGGD---GDLSAPIVHSSLLLGMITVIKNGNSDGESRPPSARENAAPRDIENARVLWGERDKRLLETIARSVGVAAVLDQKQRWA--AVMQVEPLRKVVAESLHQVKNPMTALRTFGKLLLRRLPQDDTLNRELAKDIILQSDRLVDILLPVD 1998
            S EF SL +AQFEVL+ ++GA R VLY RRE   TG LEFVPA  YP+              P +  +++ G        S+E L+P     E   + PD+ +G D   G +S PI + + ++GM+ + +N         PS  E+    D       W   +K  ++ IA ++ +A VLDQ+ +++    +Q E LR ++++SLHQVKN ++A+R FGKLLLRRLP DD +NRELAKDI++QSDR+V++L+P D
Sbjct:   22 SSEFCSLCQAQFEVLSGLVGASRCVLYFRREDPLTGKLEFVPASVYPQTQRVWVVGEGPGGRPSSGPVELPGF------ISAENLMP-----EYPFNMPDSADGSDISDGGISVPIQYGNTVIGMLAIWRN---------PSENESGEAEDR-----AWTRGEKTQIKNIASTLAIAIVLDQRNQFSYNEALQAEKLRSMLSDSLHQVKNSLSAVRMFGKLLLRRLPGDDMMNRELAKDILIQSDRMVELLVPYD 251
[Close]
BLAST of Ec-28_000680.3 vs. uniprot
Match: A0A7S0UAD8_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UAD8_HEMAN)

HSP 1 Score: 168 bits (426), Expect = 4.750e-40
Identity = 108/275 (39.27%), Postives = 159/275 (57.82%), Query Frame = 1 
Query: 1285 SPEFVSLVKAQFEVLATVLGADRVVLYARRESTETGSLEFVPAMEYP------------ERPPPAWSMDIDGVQMHEHHASSELLLPAAAGQEMNADSPDAVEGGD---GDLSAPIVHSSLLLGMITVIKNGNSDGESRPPSARENAAPRDIENARVLWGERDKRLLETIARSVGVAAVLDQKQRWA--AVMQVEPLRKVVAESLHQVKNPMTALRTFGKLLLRRLPQDDTLNRELAKDIILQSDRLVDILLPVDAVLGLLATAVEREREAQMPG 2058
            SPEF SL +AQFEVL+ ++GA R VLY RRE   TG LEFVPA  YP            E  P +  +++ G        S+E L+P     E   + PD  +G D   G +S PI + + ++GM+ + +N         PS  E+    D      +W   +K  ++ IA S+ +A VLDQ+ +++    +Q E LR ++++SLHQVKN ++A+R FGKLLLRRLP DD +NRELAKDI++QSDR+V++L+P D+  G  +    +++   M G
Sbjct:   57 SPEFCSLCQAQFEVLSGLVGASRCVLYFRREDPLTGKLEFVPAAVYPQTQRVWVVGEGPEGRPSSGPVELPGF------ISAENLMP-----EYPFNMPDNADGSDISDGGISVPIQYGNTVIGMLAIWRN---------PSENESGEEEDS-----VWTREEKAHVKNIASSLALAIVLDQRNQFSYNEALQAEKLRSMLSDSLHQVKNSLSAVRMFGKLLLRRLPSDDMMNRELAKDILIQSDRMVELLVPYDSDSGRASALPYQKKPMLMLG 306
[Close]
BLAST of Ec-28_000680.3 vs. uniprot
Match: A0A3M1PE15_9CYAN (Sensor histidine kinase (Fragment) n=1 Tax=Cyanobacteria bacterium J069 TaxID=2420337 RepID=A0A3M1PE15_9CYAN)

HSP 1 Score: 108 bits (269), Expect = 3.050e-22
Identity = 86/266 (32.33%), Postives = 130/266 (48.87%), Query Frame = 1 
Query: 1276 MVGSPEFVSLVKAQFEVLATVLGADRVVLYARRESTETGSLEFVPAMEYPERPPPAWSMDIDGVQMHEHHASSELLLPAAAGQEMNADSPDAVEGGDGDLSAPIVHSSLLLGMITVIKNGNSDGESRP-----------PSARENAAPRDIENAR--VLWGERDKRLLETIARSVGVAAVLDQKQRWAA-------VMQVEPLRKVVAESLHQVKNPMTALRTFGKLLLRRLPQDDTLNRELAKDIILQSDRLVDILLPVDAVLGL 2013
            M  SPEFVSL +AQ  +L   LGA   V+Y   + T  G  + VP   YPE         +D         S E +L   +G + +   P     G+ + S P+++   L       + G +  E RP           P   E      +  AR   LWGE+++  +E +A+++ +A +LDQ+ +W         V+Q    R  + + LHQ +NP+TA+RTFGKLLLRR+  +D  N  +A+ I+ +SDRL D+LL  D V+ L
Sbjct:    3 MPASPEFVSLCQAQIAMLTQGLGAALSVVYLTDDPTAGGDADLVPVAAYPEAA-------VDW--------SQEQILRLLSGSQPHGPLPPQRLLGNAERS-PVLYPDFLEDPAASAEPGKTAAEQRPEPGLYSQKIVLPLVYEGMMMGLLVTARSDCLWGEQERSQVEHVAQTLAIARLLDQRTQWTEFELHQRQVLQSRQ-RDQMDDLLHQFRNPLTAVRTFGKLLLRRVEPEDE-NHTVAEGIVRESDRLQDLLLQFDEVIDL 250
[Close]
BLAST of Ec-28_000680.3 vs. uniprot
Match: A0A2N6K2R3_FISMU (Sensor histidine kinase n=21 Tax=Hapalosiphonaceae TaxID=1892263 RepID=A0A2N6K2R3_FISMU)

HSP 1 Score: 108 bits (271), Expect = 4.810e-21
Identity = 103/362 (28.45%), Postives = 172/362 (47.51%), Query Frame = 1 
Query: 1276 MVGSPEFVSLVKAQFEVLATVLGADRVVLYARRESTE--TGSLEFVPAMEYPERPPPAWSMD---IDGVQMHEHHASSELLLPAAAGQEMNADSPDAVEGG--DGD-LSAPIVHSSLLLGMITVIKNGNSDGESRPPSARENAAPRDIENARVLWGERDKRLLETIARSVGVAAVLDQKQRWAAVM----QV--EPLRKVVAESLHQVKNPMTALRTFGKLLLRRLPQDDTLNRELAKDIILQSDRLVDILLPVDAVLGLLATAVEREREAQMPGMVDPHAAQREDVASTSAAXXXXXXXXXXXXXXVDSTVDGVQDALLSPPAPTGMEETVAYEMMPFGLLSVEDVIQPVTRAAQAAAKER 2319
            M  S EF++L + Q  +L   LGA   V+Y  +E  E  T   + +P + YPE      S +   +  +      A+ +  +P+   Q  +  S +  E     GD +  P+V+  +++G++               +ARE+ A          W E+++  +E+IAR++ +A +LDQ++ W  V     Q+  E  + ++   LHQ +NP+TALRTFGKLLL+RL   D LNRE+A+ I+ +SDRL ++L   D V+ L    VE     ++P        ++E++                    V++TV+      L  P  TG +E   Y         + D++QP+  +AQA A+ER
Sbjct:    3 MSASSEFIALCREQMALLVQGLGASLSVVYLTQELVEAPTNEAKLIPLVVYPEAAVGGQSTNALALPTLNQKLLTAAKDFPVPSKNSQTEDGTSENLPEESLLSGDKIVLPLVYEDVMMGLLV--------------TAREDRA----------WNEQERSRIESIARTLAIACILDQRRTWLEVQLHQQQIVQEKQQDLLDNLLHQFRNPLTALRTFGKLLLKRLRPGD-LNREVAESIVRESDRLQELLKKFDEVIDL---GVENLAPLRLP--------EQEEI-------------------FVEATVEKEHKPPLLLPG-TGEKEADCY---------LADILQPLLISAQAIAQER 299
The following BLAST results are available for this feature:
BLAST of Ec-28_000680.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G9E8_ECTSI5.620e-21649.88Two component sensor histidine kinase n=1 Tax=Ecto... [more]
A0A6H5JXI6_9PHAE3.840e-16791.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWW5_9PHAE9.390e-5189.32Histidine kinase domain-containing protein n=1 Tax... [more]
A0A835ZFA0_9STRA9.960e-4845.98Two component sensor histidine kinase n=1 Tax=Trib... [more]
A0A7S0NF57_9CRYP3.790e-4534.96Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7S4DJM8_HETAK7.640e-4338.96Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S0YLT3_9CRYP8.320e-4140.00Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S0UAD8_HEMAN4.750e-4039.27Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A0A3M1PE15_9CYAN3.050e-2232.33Sensor histidine kinase (Fragment) n=1 Tax=Cyanoba... [more]
A0A2N6K2R3_FISMU4.810e-2128.45Sensor histidine kinase n=21 Tax=Hapalosiphonaceae... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:634809..642891 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score572.8
Seed ortholog evalue1.6e-160
Seed eggNOG ortholog2880.D7G9E8
Length4814
Hectar predicted targeting categorysignal peptide
Gene idEc-28_000680.3
EggNOG free text desc.Histidine kinase-like ATPases
EggNOG OGs2CYMS@1,2S572@2759
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_000680Ec-28_000680Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_28 634809..642891 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000680.3Ec-28_000680.3Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_28 635689..638826 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000680.3.1Ec-28_000680.3.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 634809..636199 +
Ec-28_000680.3.2Ec-28_000680.3.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 636481..636815 +
Ec-28_000680.3.3Ec-28_000680.3.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 637272..637400 +
Ec-28_000680.3.4Ec-28_000680.3.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 637785..637892 +
Ec-28_000680.3.5Ec-28_000680.3.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 638214..638424 +
Ec-28_000680.3.6Ec-28_000680.3.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 638654..639912 +
Ec-28_000680.3.7Ec-28_000680.3.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 640801..640940 +
Ec-28_000680.3.8Ec-28_000680.3.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 641651..642891 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0006805UTR:Ec-28_000680.3Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_28 634809..635688 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000680.3CDS:Ec-28_000680.3Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_28 635689..636199 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0006803UTR:Ec-28_000680.3Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_28 638827..639912 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-28_000680.3 ID=Ec-28_000680.3|Name=Ec-28_000680.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=489bp
MRERRRTLPLVLLVTHVLLLVVARKDSNGMVAFGTAGTVTRIAPQLVTSM
RCSTPAADLQRPRRAGGGGRQYRLAAADPRTGAHDRRGATSIDDPPHHVN
EGQEEPEQQDAWSSAGWAGERNARPPSTSGEAMVGSPEFVSLVKAQFEVL
ATVLGADRVVLYARRESTETGSLEFVPAMEYPERPPPAWSMDIDGVQMHE
HHASSELLLPAAAGQEMNADSPDAVEGGDGDLSAPIVHSSLLLGMITVIK
NGNSDGESRPPSARENAAPRDIENARVLWGERDKRLLETIARSVGVAAVL
DQKQRWAAVMQVEPLRKVVAESLHQVKNPMTALRTFGKLLLRRLPQDDTL
NRELAKDIILQSDRLVDILLPVDAVLGLLATAVEREREAQMPGMVDPHAA
QREDVASTSAAAAAAAAAAAAASSAVDSTVDGVQDALLSPPAPTGMEETV
AYEMMPFGLLSVEDVIQPVTRAAQAAAKERCGGMSKGS*
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spliced messenger RNA

>Ec-28_000680.3 ID=Ec-28_000680.3|Name=Ec-28_000680.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=4814bp|location=Sequence derived from alignment at chr_28:634809..642891+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
TACCTCCACAAGAGAGCACATCATCACCACCAGAAAGAGGGTGTCAACGC
TCACAGCCATGACCGATGGCAAGTGAGGCGAAGCGCCCACCATGCCTGCC
ATTATGTGTACGCTCTCTCGGTTATTTCGCGCTTTTCAGTCGGTCGTTCA
AATTCCCCCTGCAGCGCCTAAGTCACGCGTTTGTAGCTGTCAACGGCATG
TTTTCGAGACCAGAATGAAACGAGCGGTAGGGAGGGTCATGTTCCGAGGG
GCCATCGGGGTAGCGCTGTGGGCGGAAAAGGAGGTCTGGTTGCGGTACAA
TCGAAAAAGACTCCGCTACAAAATGTTTGGATTTCAGAATAGATACACAG
CCGGGGGGTCATCGAAGCTCTCTCACGCATGGATCAGAGCTTTTCTTCCG
ATTAACCAAGCAGTAGCTTCCGCACAGCTGCCAAACTTCAACTTTTGGTC
AAACGTTCAATTCGGAAAATGTCTCCTGCGCTCGCTACCGCTGTGACAGC
AAGCAGGTACACACGTGGCAGTTCAGCTGCGACTCGTTTCGCTACGTGCA
TAACCATCCTCCTTATCCCTGTCAACCTCAGTTCTCAAGATCGCAACACA
TTCGTTGGCCATACCTTTGAGGAAGAGGGAAGCCCAGCAACACGCAAGAG
AGAGCAGAGACCAGCGACAGCTGTGGTGTGACAGCGCAAGCGAGCGAGCT
GGCGTGTGTAGTGGATGTTCTACTCTGCGTGGCCTCCTACAGTCTTGCTA
ATCCCGCCGCACCTGCAGTACCCACGTACACCCACCTCCCCCTCCCCCAG
CAGGAATACCTACTAATAGCACTGCAGTCTGCACACTACCTCCCTGCCTC
CTTCCTGTCTGTTCTCGCCATCCATACACTATGAGAGAGCGACGGCGCAC
ATTACCTTTGGTTTTGTTGGTGACACATGTCCTGCTTCTCGTCGTAGCCC
GCAAGGATTCAAACGGCATGGTCGCCTTCGGTACAGCAGGAACGGTAACC
AGGATTGCTCCACAACTCGTCACAAGCATGCGGTGCTCTACACCAGCAGC
GGACTTGCAACGTCCCAGAAGAGCTGGCGGAGGAGGGCGGCAGTACAGAC
TAGCAGCTGCTGACCCGAGGACAGGCGCACACGACCGGCGTGGGGCTACA
AGTATAGATGATCCGCCCCACCACGTCAACGAGGGGCAAGAGGAACCTGA
GCAGCAGGACGCCTGGTCCAGTGCGGGGTGGGCAGGAGAACGAAACGCAA
GGCCGCCCAGCACCAGCGGCGAGGCAATGGTGGGGTCGCCTGAGTTCGTG
AGCCTGGTCAAGGCTCAGTTCGAGGTGCTCGCCACGGTGCTGGGAGCGGA
TCGGGTCGTGCTGTATGCGAGAAGAGAGAGCACCGAAACAGGTTCCTTGG
AGTTTGTTCCTGCCATGGAGTATCCCGAGAGGCCGCCGCCTGCGTGGAGC
ATGGACATTGACGGTGTCCAGATGCATGAGCACCATGCTAGCAGCGAGCT
GTTGCTCCCGGCAGCCGCCGGGCAGGAGATGAATGCCGACTCCCCCGATG
CGGTGGAGGGAGGCGACGGTGACCTGAGCGCTCCCATCGTGCATTCCTCT
TTACTGCTGGGAATGATTACCGTTATTAAGAATGGGAACAGCGACGGTGA
ATCTAGGCCGCCTTCAGCACGGGAGAACGCTGCCCCGAGGGACATCGAAA
ATGCTCGAGTTTTGTGGGGCGAGCGGGACAAAAGGCTGCTGGAAACAATT
GCCAGGTCGGTGGGGGTGGCTGCTGTCCTCGACCAGAAGCAGAGGTGGGC
GGCTGTGATGCAAGTCGAGCCGCTGAGAAAGGTTGTGGCGGAGTCTCTCC
ACCAGGTGAAGAATCCCATGACGGCGTTGAGGACGTTCGGCAAGTTGCTG
CTCAGAAGGCTGCCGCAGGATGACACGCTTAATCGAGAGCTGGCGAAGGA
CATTATTCTGCAGTCTGACCGCCTCGTGGACATTCTTCTGCCAGTAGACG
CGGTGCTCGGCCTGCTAGCCACGGCCGTTGAACGAGAGCGAGAGGCGCAG
ATGCCAGGCATGGTGGACCCACATGCGGCCCAGAGGGAGGATGTCGCATC
CACTTCCGCCGCCGCCGCCGCCGCAGCAGCAGCAGCAGCAGCAGCATCTT
CCGCGGTGGATAGCACCGTCGACGGGGTGCAGGACGCTCTGCTGTCGCCA
CCAGCCCCGACCGGGATGGAGGAAACGGTGGCGTACGAGATGATGCCGTT
CGGGCTTCTCTCCGTGGAAGACGTGATCCAGCCGGTTACTAGGGCGGCGC
AAGCGGCCGCCAAGGAAAGGTGCGGCGGAATGTCAAAAGGCAGCTAGAAG
CAACCGGAACAGCGGTGTGGTGGTGGTGGTGATGGTACCTTTCGTAGAGG
TGCTAGGGAGCCAGCCCCCAGGGGTGCAAACAAGGTTATCCGGCCTACAT
CTTACCAGGTGCCAATTTCGGATTATGTAAAATCTTACCAGGGCCCTGTC
CCACGTCCAACTCGGGTGTCCTCCCCGTTCGCAAGGTATCGGGTGTGGGA
ATTTCGTCCGTACCCTCCGTGCATTACGTCTCATGATTGCACGTACGTGT
GCCACTGATGGCGCGGTACGCGCCCCTGCCATGCTTTGTGCGGGTCACGC
TGCACTACTACGTTGTTGTGTTCGTCGCGCGATCGTGGCTGCGGTTACAC
ATCGGGTGTGAGTTTGTTATTGTACAGCTAGCGCCCGCACTTGAATGACT
TGGCAGTTAACCACCCACAATGCTCACTATTGCATCAAAACATATGAACT
TGAGCACGATTTGTGACCCCGATTAAGAACCCATACACTAAGAACCATGG
CACCCCTATCCCTACAGGAACTAGAACCCCAGCCTCGACCAAAACTAGAG
GTTTCATCAAGTGGGCACTATCTGTATCCTTCCGGCTGGCGTGTTTCCCT
GCCCTACCGGCGGCTGCGTGCTTCCATGGTCTGCACTGCGTAAGCGAGTG
TTCCCTGTGTGCTGCGAATATTAATATTTGTTGTGTACCCCCGTTACCCT
GTCGAATGCCCGTGGAAACGTTTGGCCGAGATGAAACAACCGAGCTCTTT
TCGGTCATTTAGTGGGAGCACCGACGCTCGCCGTGTCTGTAAGTCGGTTA
CAAACCTGCCGTGGACGGGCACCGCGACGAGTGTGCTTATTGATGCGGCG
CTTAGACTGCATGCTTTGCCCCTCTTCGACACGTAGCGAGCGTTGCTCTC
CTCGACCACGTAGGGTTTGTTTCTTCATGCTGCCCTACACGCCTCTGCAT
TTCTTCGGTATAACTATGGAGCGTTGCTTTCCTCGGTGACACTGTCTTGG
TTTCATGTCGCAGGCGGGTCGGCTTCAGGTGGCGGGTGGACCAAGATCTT
CCCGAAGTCGTTGGCGACGAGCGGGCCTTGGAGGAGGCCTTGTCCAACGT
CGTGGAAAACGCGCTAAAGTTCTGCAAGATGGGGCGCGGCGAGGGCGGGA
AGGACGGCGGGGTTCGTGCGACGGTGGTCTTGAGGGCCCGCCTGAGCGCG
GAACCCGAGTGGGGAGCCGAGAGCGGCGTTGTTATAGAAGTCGTGGACAA
CGGCCCGGGCATCGAAGCAGAAGACATGCCGTACATCTTCGACCGCGGGT
ACAGAGGGAGGCAGCCGTTACAGTGCGGCATTCCGGGGACGGGCCTCGGC
CTGGGCATCGCCAGGGACACGATGCGCTCGTTCGGCGGGGACCTGGAGGT
TGTGAATATGAAGAGGGACACGGATGGTGATGGTGGTGCCGGTGGTGGCT
TAAAGGACGGGGGCTGGGGGACGGGGGTGAAGCTGTACCTGCCGAGGGGG
GAACGAAGGACATCAGAGGGGGGGGGATGAAGCCGAACAGTTATTTAGCG
TGGATGGACCGGCGCCATGTATTCGTGGAATTTTGATTGTCGGACTGCTG
GCAACGCATAGATGGGTGGTTGTGCTTGTAGTGGTTCTTGGGGTGAAGCC
GAACGTGGTTATTCTTGTTGGGTGGCGTTGACGTTTTTGTTGTTTGTTGC
GTCGTTTATATGAAATGCCTCTCTTTTTTCTGGGGCAGGAAAACCGATTT
GTACAGCATTGTTAGTGGTTATTTCGTGGGGTGGATGGGGCGATTCGCCA
GGTACCATCACCTGTTCCGCAATGTGGAGGGCGACACAGGACCCGTTCCG
GGAGGGTACCGCTGATTCTATCTTCGAAGCCAACGCCCACCACGAAGGAA
TCGGTGGGTGAAACGAGCTGCCACTCGGTTCGGGGTTCTTAAGGACAAAA
GTGGTTCGCCGCGTGATCCTCTCTGATACCCTCCCACCCTAGTGGTCGCG
CGCCTCCCCCCCCAAATATGTCGAATGGCTGTGCCGGAACTGTTGTGCCT
TGTCGGTTTTTCTCGAAAGCTGGTGGTGGCGGTTCGCCCGACCCGGGGGG
GCTTTCGTGGACCAAGTTTTGGTACTCTCATTCAGACAACTGCTGTGCGC
TATTAGTGATTGCTTCACAGCATTTTCCACAAGACAGCCGGTTATTTGGC
GACGCCTCTTTGGTACTTTGTGCGTTTGTGCCTGGGGCTTACCCCTAACA
GTGAGAGTCAGTACTGTTGTCGCATTTGTGTTTGTTCAGCGAGACGAAGT
GAGGCCGTTGGCTTTTCCATCCCCCCCTTGTCCACAAACGGTGGTACAGG
TCCTACAAAATATCCTCCCCATATATTTCTTTAAACGGTAGGGGGGGGGG
GGATCCCCCACACCATATTTATGTCAGTCGTCCGCAAAGTGGCGGCAAAA
GAAGAACCGGCGGC
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protein sequence of Ec-28_000680.3

>Ec-28_000680.3 ID=Ec-28_000680.3|Name=Ec-28_000680.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=489bp
MRERRRTLPLVLLVTHVLLLVVARKDSNGMVAFGTAGTVTRIAPQLVTSM
RCSTPAADLQRPRRAGGGGRQYRLAAADPRTGAHDRRGATSIDDPPHHVN
EGQEEPEQQDAWSSAGWAGERNARPPSTSGEAMVGSPEFVSLVKAQFEVL
ATVLGADRVVLYARRESTETGSLEFVPAMEYPERPPPAWSMDIDGVQMHE
HHASSELLLPAAAGQEMNADSPDAVEGGDGDLSAPIVHSSLLLGMITVIK
NGNSDGESRPPSARENAAPRDIENARVLWGERDKRLLETIARSVGVAAVL
DQKQRWAAVMQVEPLRKVVAESLHQVKNPMTALRTFGKLLLRRLPQDDTL
NRELAKDIILQSDRLVDILLPVDAVLGLLATAVEREREAQMPGMVDPHAA
QREDVASTSAAAAAAAAAAAAASSAVDSTVDGVQDALLSPPAPTGMEETV
AYEMMPFGLLSVEDVIQPVTRAAQAAAKERCGGMSKGS*
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mRNA from alignment at chr_28:634809..642891+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-28_000680.3 ID=Ec-28_000680.3|Name=Ec-28_000680.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=8083bp|location=Sequence derived from alignment at chr_28:634809..642891+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
TACCTCCACAAGAGAGCACATCATCACCACCAGAAAGAGGGTGTCAACGC
TCACAGCCATGACCGATGGCAAGTGAGGCGAAGCGCCCACCATGCCTGCC
ATTATGTGTACGCTCTCTCGGTTATTTCGCGCTTTTCAGTCGGTCGTTCA
AATTCCCCCTGCAGCGCCTAAGTCACGCGTTTGTAGCTGTCAACGGCATG
TTTTCGAGACCAGAATGAAACGAGCGGTAGGGAGGGTCATGTTCCGAGGG
GCCATCGGGGTAGCGCTGTGGGCGGAAAAGGAGGTCTGGTTGCGGTACAA
TCGAAAAAGACTCCGCTACAAAATGTTTGGATTTCAGAATAGATACACAG
CCGGGGGGTCATCGAAGCTCTCTCACGCATGGATCAGAGCTTTTCTTCCG
ATTAACCAAGCAGTAGCTTCCGCACAGCTGCCAAACTTCAACTTTTGGTC
AAACGTTCAATTCGGAAAATGTCTCCTGCGCTCGCTACCGCTGTGACAGC
AAGCAGGTACACACGTGGCAGTTCAGCTGCGACTCGTTTCGCTACGTGCA
TAACCATCCTCCTTATCCCTGTCAACCTCAGTTCTCAAGATCGCAACACA
TTCGTTGGCCATACCTTTGAGGAAGAGGGAAGCCCAGCAACACGCAAGAG
AGAGCAGAGACCAGCGACAGCTGTGGTGTGACAGCGCAAGCGAGCGAGCT
GGCGTGTGTAGTGGATGTTCTACTCTGCGTGGCCTCCTACAGTCTTGCTA
ATCCCGCCGCACCTGCAGTACCCACGTACACCCACCTCCCCCTCCCCCAG
CAGGAATACCTACTAATAGCACTGCAGTCTGCACACTACCTCCCTGCCTC
CTTCCTGTCTGTTCTCGCCATCCATACACTATGAGAGAGCGACGGCGCAC
ATTACCTTTGGTTTTGTTGGTGACACATGTCCTGCTTCTCGTCGTAGCCC
GCAAGGATTCAAACGGCATGGTCGCCTTCGGTACAGCAGGAACGGTAACC
AGGATTGCTCCACAACTCGTCACAAGCATGCGGTGCTCTACACCAGCAGC
GGACTTGCAACGTCCCAGAAGAGCTGGCGGAGGAGGGCGGCAGTACAGAC
TAGCAGCTGCTGACCCGAGGACAGGCGCACACGACCGGCGTGGGGCTACA
AGTATAGATGATCCGCCCCACCACGTCAACGAGGGGCAAGAGGAACCTGA
GCAGCAGGACGCCTGGTCCAGTGCGGGGTGGGCAGGAGAACGAAACGCAA
GGCCGCCCAGCACCAGCGGCGAGGCAATGGTGGGGTCGCCTGAGTTCGTG
AGCCTGGTCAAGGCTCAGTTCGAGGTGCTCGCCACGGTGCTGGGAGCGGA
TCGGGTCGTGCTGTATGCGAGAAGAGAGAGCACCGAAACAGGTGAAGACT
ACACGCTGTGAGCGTCCATGATTCGACTCATGCTCCTTCTTTGCTCATGG
CAATCAACCAACACTCGTGCCTGTCGATCGCGGGTTTCGCGATCGGGTTC
GAGATACACCGTCGGTTACTCGCTGAATCTTTCGTTCACATTGAATTTTG
ACTATGGTACCTATACAAAAGTTCCGATGTCACACGGCCCGCTTGCCCTG
CATGTTCAAGTTGGCCTGCTTACCCCTCGTCGGCTCTCTACCCCTCAACC
TCGGCTGGACGGAACACCACAGGTTCCTTGGAGTTTGTTCCTGCCATGGA
GTATCCCGAGAGGCCGCCGCCTGCGTGGAGCATGGACATTGACGGTGTCC
AGATGCATGAGCACCATGCTAGCAGCGAGCTGTTGCTCCCGGCAGCCGCC
GGGCAGGAGATGAATGCCGACTCCCCCGATGCGGTGGAGGGAGGCGACGG
TGACCTGAGCGCTCCCATCGTGCATTCCTCTTTACTGCTGGGAATGATTA
CCGTTATTAAGAATGGGAACAGCGACGGTGAATCTAGGCCGCCTTCAGCA
CGGGAGAACGCTGCCCCGAGGGACATCGAAAATGCTCGAGTTTTGTGGGG
CGAGCGGGTGAGTGAGTGTGTGGATGAGGATTTTAAAGGCAGACGTTTTG
AATCAAGCTCTCCATGATTGTTGTCTTTGATCTGTGCATGCAATCGCGTC
GTTTGGAATATAGGGGGTTAACTCGGTTGTCTGCTTGCTGCTCTTGCAAC
AGGTGTAGCCTAAAGCTTCAAGAAGCTCATGGGGCATTGCAATTTCGTGA
ACATTGTATCTATTGTTGTAGCGCTTCTACAAATAAAGGTCCGCGCCGTG
GATGGTTGCCGTCAATCGTTTTAGGGTTCCACTCGAGGCATCGGTCTCGC
AAGTAGTGCCCACTGCACGTCGAGAGTACAATCGATGACACGGACACGCC
CTTTATCGCCGCATGCGTGCGCCTGCGGTAAAGTTCCAAGATCGCTAAGA
GACAGCAGTAGTCTTCAATCATGCTCGGTTATTTGTGTGTCACATTCGAC
GGTGCTGTCCCAGGACAAAAGGCTGCTGGAAACAATTGCCAGGTCGGTGG
GGGTGGCTGCTGTCCTCGACCAGAAGCAGAGGTGGGCGGCTGTGATGCAA
GTCGAGCCGCTGAGAAAGGTTGTGGCGGAGTCTCTCCACCAGGTGAGCCA
ACCTGCGCCGCCCCGTGCCCTCCATGGCGTGTGGCCCGACCCTGATCTGT
AGACGGTGGGAAGCACGGCATGCGTCGCCCGAGTTGGTTGTGTACATGCG
TGCGCTACCCATACATTCCTTTTTTAGCTTCATCTGGGACGACTCTTGGC
CTCTGCGCTTTCGTTGTCAGCTAGGAATACCGTCTCCGCAGGCGTTGCTG
TCATATCGGTGGTGCTGCTGCTGCGGGTATCCCAAGACAATAAGTTGGCA
CCCTTGGTTGCCTTACCATTTGTCACAGCTTACAGAGAAACAGCGAGAGG
TTCATCCCGCCACACGTGAGTGTTCTGTCAGATTCATGTTCGTCGATGAC
AAGCGCACTTTACCGTGTGGCACCAGGTGAAGAATCCCATGACGGCGTTG
AGGACGTTCGGCAAGTTGCTGCTCAGAAGGCTGCCGCAGGATGACACGCT
TAATCGAGAGCTGGCGAAGGACATTATTCTGCAGGTATCATATGGGGGCG
AGTGTGGGGGCTTTCGCTACAGTTGCTGTCTATCTCTGCCTGTGCAACAC
TTGGTGTTGCGATGGTGTACACTCTAGCTGAAGTTGTTGCGATTCCAGCA
TGAAATCAAGCGCCGAGATGGCAGTATCACGTGTCACACAAAAATAAGTT
TCAAACGTTTGAGCCCTGTGGGCAGCATTGTAGGTGCTTGTGGTTTGCAT
TCCTCGTGAGCGTGTACGGTGTGTTCCTGTTTCCTGGTACATTGCGTTTT
CATCATCCAAACGCCTGCCCCATCTCTTTTTTCTCTGTGCTTTGATGGAG
GCCAGTCTGACCGCCTCGTGGACATTCTTCTGCCAGTAGACGCGGTGCTC
GGCCTGCTAGCCACGGCCGTTGAACGAGAGCGAGAGGCGCAGATGCCAGG
CATGGTGGACCCACATGCGGCCCAGAGGGAGGATGTCGCATCCACTTCCG
CCGCCGCCGCCGCCGCAGCAGCAGCAGCAGCAGCAGCATCTTCCGCGGTG
GATAGCACCGTCGACGGTATGGGTGTAACGGCAACACAGGATTTGCAGTG
GAGGTCTCCCACTGTGCCTTAGCACCTAGTTTTGTCCTGTGCATTGGGGG
AGGGGTTCAACAGCAACACGTTCCGCCTGTATCTTGGAAAATATTCGTAA
GGGCTCGCGTGTTGTTCAGTTTTCCGCGACGACGTACCGGAGTGGTGAAA
GTCCGTGTTCCCGCTCGGGCTGTTGTCGCGTTTTGTCCGCGGCAGGGGTG
CAGGACGCTCTGCTGTCGCCACCAGCCCCGACCGGGATGGAGGAAACGGT
GGCGTACGAGATGATGCCGTTCGGGCTTCTCTCCGTGGAAGACGTGATCC
AGCCGGTTACTAGGGCGGCGCAAGCGGCCGCCAAGGAAAGGTGCGGCGGA
ATGTCAAAAGGCAGCTAGAAGCAACCGGAACAGCGGTGTGGTGGTGGTGG
TGATGGTACCTTTCGTAGAGGTGCTAGGGAGCCAGCCCCCAGGGGTGCAA
ACAAGGTTATCCGGCCTACATCTTACCAGGTGCCAATTTCGGATTATGTA
AAATCTTACCAGGGCCCTGTCCCACGTCCAACTCGGGTGTCCTCCCCGTT
CGCAAGGTATCGGGTGTGGGAATTTCGTCCGTACCCTCCGTGCATTACGT
CTCATGATTGCACGTACGTGTGCCACTGATGGCGCGGTACGCGCCCCTGC
CATGCTTTGTGCGGGTCACGCTGCACTACTACGTTGTTGTGTTCGTCGCG
CGATCGTGGCTGCGGTTACACATCGGGTGTGAGTTTGTTATTGTACAGCT
AGCGCCCGCACTTGAATGACTTGGCAGTTAACCACCCACAATGCTCACTA
TTGCATCAAAACATATGAACTTGAGCACGATTTGTGACCCCGATTAAGAA
CCCATACACTAAGAACCATGGCACCCCTATCCCTACAGGAACTAGAACCC
CAGCCTCGACCAAAACTAGAGGTTTCATCAAGTGGGCACTATCTGTATCC
TTCCGGCTGGCGTGTTTCCCTGCCCTACCGGCGGCTGCGTGCTTCCATGG
TCTGCACTGCGTAAGCGAGTGTTCCCTGTGTGCTGCGAATATTAATATTT
GTTGTGTACCCCCGTTACCCTGTCGAATGCCCGTGGAAACGTTTGGCCGA
GATGAAACAACCGAGCTCTTTTCGGTCATTTAGTGGGAGCACCGACGCTC
GCCGTGTCTGTAAGTCGGTTACAAACCTGCCGTGGACGGGCACCGCGACG
AGTGTGCTTATTGATGCGGCGCTTAGACTGCATGCTTTGCCCCTCTTCGA
CACGTAGCGAGCGTTGCTCTCCTCGACCACGTAGGGTTTGTTTCTTCATG
CTGCCCTACACGCCTCTGCATTTCTTCGGTATAACTATGGAGCGTTGCTT
TCCTCGGTGACACTGTCTTGGTTTCATGTCGCAGGCGGGTCGGCTTCAGG
TGGCGGGTGGACCAAGATCTTCCCGAAGTCGTTGGCGACGAGCGGGCCTT
GGAGGTACGGACGGCACTGCTGCTGCAGTACCGCCGCTCTTATTGTATCG
TCAATCTTGTGTACATAGCACCCTGTGGAGCTTGGAGCTTGGACGTTGTA
TGACAGACCTTTGTCCTTGATTCAGAACTTCCTATGTAGTGTTCTTGTCG
ATTGGCTGTTCGCTGTCTGTCCAAATGCTTTCGTTTGAGAACATACTTCA
TATGTATATATATTTTTTTCAAAACAAACATTATTTTTCTTTTTGTGTTT
CTTTCCTGGCCTCGACGTCGACGATGATCGAGACCAACGATACTTGACGT
CAACGATGCCCAACATGAATGATGCTTGACATCACCGATCCTTTATATCA
ACGTTCGAATCAATCATGAAAATATCGTCAGTATGTCGCCTTTCGTGTAA
TCCCCTCTCAGTTTTATACGAAGCTTTCCGCCATGAACAGCACCCTGCCC
CACTGCAACAGTCTGTCGACCATTAGACCGCATGTTGCCGAGACCGACAA
TACTCAACAATGCACCTGGCCGTTGTGCGATTGTCAACGATGCCCGACAT
CAACGATACATCCCAGGTTTTATTGTTGTATGGATTTGTTGGTTAACGGT
TGCATGAAGAAACGTTCGCTAGACATACTGCCCTTCTTTTGCCGTTCCAC
GTACACTGTTGAGCTGACACCCAGGTTCGAGGGTAGACGTCTTGCTTCGA
TGTCCTCCTGTTCTCTGCCTGATTGGCTCCTCGACACACGAAGCGCTCGC
CCGGAGGGTGTACTCACGTTTTGGGCGCGCGCGGGGGGGGGTGTCAACCT
TCGGCGCGCGTTGTGCACCACGTCTGGCTTGTCTGTCTGTTGATGTGCTC
TCTGATGCCGTGCCGGCGTTCGTTCGTTCGTTGTGGTTTCAGGAGGCCTT
GTCCAACGTCGTGGAAAACGCGCTAAAGTTCTGCAAGATGGGGCGCGGCG
AGGGCGGGAAGGACGGCGGGGTTCGTGCGACGGTGGTCTTGAGGGCCCGC
CTGAGCGCGGAACCCGAGTGGGGAGCCGAGAGGTGGGCGTCGCACGGCAG
TAGCGAACCGTAGGTTGCATGACGTAAGATATCACGCCCCCTGGACCGGT
TTTTCGAAGCTCGATTACTGGGCAGGAAAAGGCAGCGGCGGTGCCGGTAA
TGGCGGCGTTGGGACCGTCTCGTCGAGAGCTTTCCGAAAACTATCCTTTG
ATTTGTGCGTCCTGTTCGTCGTGGAGTAATCGAGCTTTGAAAATCGGTCC
AGGGCACGTGATATATTTGGCAACCTGTGTAGCTTCAGCGCACACCATAA
CATTTCGCCGTCACGTCTCACTATATTGTAGCTCGTGGTTGCCTATCTCT
TCTGTATCTGACACACGAGGTTTTTTGTTTGAACAGCGGCCGTCCTCCCG
GTGCATGTGTTCTATGCGGGATAATTCTGCAATGGTGGCTTTGATCCTAG
GCGACATGAACGAGTTGGAGCTGCTCAAGATGTGTACTTCGATATTTCAG
GCGTGCACTGACCCCGTACGACCGGCCGTGCCTGGCGGAACAGCATTCTG
GTTCTAGAGCCTCCGTTCTTACGCAGCAATACGCAACAAGCTCTATCACC
TTTTCCACTTTGCTTAGGGAATACTTTTCCGCGTGTATCATCAGTTTGTT
TTTCGCTCCGTTTCCCCGCCTGGCCTTTCGAACACCTGCTGGGCAACACC
CCAACTATATGTCTTCCACCTGCGCGCTTACTGTTTTCGCAGCGGCGTTG
TTATAGAAGTCGTGGACAACGGCCCGGGCATCGAAGCAGAAGACATGCCG
TACATCTTCGACCGCGGGTACAGAGGGAGGCAGCCGTTACAGTGCGGCAT
TCCGGGGACGGGCCTCGGCCTGGGCATCGCCAGGGACACGATGCGCTCGT
TCGGCGGGGACCTGGAGGTTGTGAATATGAAGAGGGACACGGATGGTGAT
GGTGGTGCCGGTGGTGGCTTAAAGGACGGGGGCTGGGGGACGGGGGTGAA
GCTGTACCTGCCGAGGGGGGAACGAAGGACATCAGAGGGGGGGGGATGAA
GCCGAACAGTTATTTAGCGTGGATGGACCGGCGCCATGTATTCGTGGAAT
TTTGATTGTCGGACTGCTGGCAACGCATAGATGGGTGGTTGTGCTTGTAG
TGGTTCTTGGGGTGAAGCCGAACGTGGTTATTCTTGTTGGGTGGCGTTGA
CGTTTTTGTTGTTTGTTGCGTCGTTTATATGAAATGCCTCTCTTTTTTCT
GGGGCAGGAAAACCGATTTGTACAGCATTGTTAGTGGTTATTTCGTGGGG
TGGATGGGGCGATTCGCCAGGTACCATCACCTGTTCCGCAATGTGGAGGG
CGACACAGGACCCGTTCCGGGAGGGTACCGCTGATTCTATCTTCGAAGCC
AACGCCCACCACGAAGGAATCGGTGGGTGAAACGAGCTGCCACTCGGTTC
GGGGTTCTTAAGGACAAAAGTGGTTCGCCGCGTGATCCTCTCTGATACCC
TCCCACCCTAGTGGTCGCGCGCCTCCCCCCCCAAATATGTCGAATGGCTG
TGCCGGAACTGTTGTGCCTTGTCGGTTTTTCTCGAAAGCTGGTGGTGGCG
GTTCGCCCGACCCGGGGGGGCTTTCGTGGACCAAGTTTTGGTACTCTCAT
TCAGACAACTGCTGTGCGCTATTAGTGATTGCTTCACAGCATTTTCCACA
AGACAGCCGGTTATTTGGCGACGCCTCTTTGGTACTTTGTGCGTTTGTGC
CTGGGGCTTACCCCTAACAGTGAGAGTCAGTACTGTTGTCGCATTTGTGT
TTGTTCAGCGAGACGAAGTGAGGCCGTTGGCTTTTCCATCCCCCCCTTGT
CCACAAACGGTGGTACAGGTCCTACAAAATATCCTCCCCATATATTTCTT
TAAACGGTAGGGGGGGGGGGGATCCCCCACACCATATTTATGTCAGTCGT
CCGCAAAGTGGCGGCAAAAGAAGAACCGGCGGC
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Coding sequence (CDS) from alignment at chr_28:634809..642891+

>Ec-28_000680.3 ID=Ec-28_000680.3|Name=Ec-28_000680.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1467bp|location=Sequence derived from alignment at chr_28:634809..642891+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGAGAGAGCGACGGCGCACATTACCTTTGGTTTTGTTGGTGACACATGT
CCTGCTTCTCGTCGTAGCCCGCAAGGATTCAAACGGCATGGTCGCCTTCG
GTACAGCAGGAACGGTAACCAGGATTGCTCCACAACTCGTCACAAGCATG
CGGTGCTCTACACCAGCAGCGGACTTGCAACGTCCCAGAAGAGCTGGCGG
AGGAGGGCGGCAGTACAGACTAGCAGCTGCTGACCCGAGGACAGGCGCAC
ACGACCGGCGTGGGGCTACAAGTATAGATGATCCGCCCCACCACGTCAAC
GAGGGGCAAGAGGAACCTGAGCAGCAGGACGCCTGGTCCAGTGCGGGGTG
GGCAGGAGAACGAAACGCAAGGCCGCCCAGCACCAGCGGCGAGGCAATGG
TGGGGTCGCCTGAGTTCGTGAGCCTGGTCAAGGCTCAGTTCGAGGTGCTC
GCCACGGTGCTGGGAGCGGATCGGGTCGTGCTGTATGCGAGAAGAGAGAG
CACCGAAACAGGTTCCTTGGAGTTTGTTCCTGCCATGGAGTATCCCGAGA
GGCCGCCGCCTGCGTGGAGCATGGACATTGACGGTGTCCAGATGCATGAG
CACCATGCTAGCAGCGAGCTGTTGCTCCCGGCAGCCGCCGGGCAGGAGAT
GAATGCCGACTCCCCCGATGCGGTGGAGGGAGGCGACGGTGACCTGAGCG
CTCCCATCGTGCATTCCTCTTTACTGCTGGGAATGATTACCGTTATTAAG
AATGGGAACAGCGACGGTGAATCTAGGCCGCCTTCAGCACGGGAGAACGC
TGCCCCGAGGGACATCGAAAATGCTCGAGTTTTGTGGGGCGAGCGGGACA
AAAGGCTGCTGGAAACAATTGCCAGGTCGGTGGGGGTGGCTGCTGTCCTC
GACCAGAAGCAGAGGTGGGCGGCTGTGATGCAAGTCGAGCCGCTGAGAAA
GGTTGTGGCGGAGTCTCTCCACCAGGTGAAGAATCCCATGACGGCGTTGA
GGACGTTCGGCAAGTTGCTGCTCAGAAGGCTGCCGCAGGATGACACGCTT
AATCGAGAGCTGGCGAAGGACATTATTCTGCAGTCTGACCGCCTCGTGGA
CATTCTTCTGCCAGTAGACGCGGTGCTCGGCCTGCTAGCCACGGCCGTTG
AACGAGAGCGAGAGGCGCAGATGCCAGGCATGGTGGACCCACATGCGGCC
CAGAGGGAGGATGTCGCATCCACTTCCGCCGCCGCCGCCGCCGCAGCAGC
AGCAGCAGCAGCAGCATCTTCCGCGGTGGATAGCACCGTCGACGGGGTGC
AGGACGCTCTGCTGTCGCCACCAGCCCCGACCGGGATGGAGGAAACGGTG
GCGTACGAGATGATGCCGTTCGGGCTTCTCTCCGTGGAAGACGTGATCCA
GCCGGTTACTAGGGCGGCGCAAGCGGCCGCCAAGGAAAGGTGCGGCGGAA
TGTCAAAAGGCAGCTAG
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Synonyms
The feature 'Ec-28_000680.3' has the following synonyms
Synonym
Esi0098_0022
Esi_0098_0022