Ec-28_000520.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-28_000520.1
Unique NameEc-28_000520.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length202
Homology
[Close]
BLAST of Ec-28_000520.1 vs. uniprot
Match: A0A6H5K4H0_9PHAE (Adenine phosphoribosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4H0_9PHAE)

HSP 1 Score: 401 bits (1031), Expect = 5.500e-138
Identity = 200/203 (98.52%), Postives = 201/203 (99.01%), Query Frame = 1 
Query:   37 LPMEETYMPDGPEAQRIARTIPFYPFKGIDRFYDIGGMCADPEAFALAVKIFADRYRGMKIDSIGGFDARGFILGPPVALALNIPFFMLRKKGKMPNVIDGAAYSKEYKGDDGAGQDALCVQRSAATAGQRVVLVDDLVATGGTLMAGVDLVKGLGAEVVECACMIELKALNGVGKLHERHADVPVWSLISENILTVKGEESS 645
            +PMEETYMPDGPEAQRIARTIPFYPFKGIDRFYDIGGMCADPEAFALAVKIFADRYRGMKIDSIGGFDARGFILGPPVALALNIPFFMLRKKGKMPNVIDGAAYSKEYKGDDGAGQDALCVQRSAATAGQRVVLVDDLVATGGTLMAGVDLVKGLGAEVVECACMIELKALNGVGKLHERH DVPVWSLISENILTVKGEE S
Sbjct:    1 MPMEETYMPDGPEAQRIARTIPFYPFKGIDRFYDIGGMCADPEAFALAVKIFADRYRGMKIDSIGGFDARGFILGPPVALALNIPFFMLRKKGKMPNVIDGAAYSKEYKGDDGAGQDALCVQRSAATAGQRVVLVDDLVATGGTLMAGVDLVKGLGAEVVECACMIELKALNGVGKLHERHGDVPVWSLISENILTVKGEEIS 203
[Close]
BLAST of Ec-28_000520.1 vs. uniprot
Match: A0A835ZL34_9STRA (Phosphoribosyltransferase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL34_9STRA)

HSP 1 Score: 261 bits (668), Expect = 5.390e-83
Identity = 123/195 (63.08%), Postives = 152/195 (77.95%), Query Frame = 1 
Query:   55 YMPDGPEAQRIARTIPFYPFKGIDRFYDIGGMCADPEAFALAVKIFADRYRGMKIDSIGGFDARGFILGPPVALALNIPFFMLRKKGKMPNVIDGAAYSKEYKGDDGAGQDALCVQRSAATAGQRVVLVDDLVATGGTLMAGVDLVKGLGAEVVECACMIELKALNGVGKLHERHADVPVWSLISENILTVKGEE 639
            Y+PDGP+AQRIA  IP+Y FK IDRFYD+GG+  D E F L ++I   RY GM ID +GG DARGF+LGPP+ALAL  PFFMLRKKGKMP+V+ G +YSKEYKGDD  G+D LC+QR A   G RV+L+DDL+ATGGT++A V+LVKG G  VVE AC++ELKAL G  ++ E+H ++  WSLISENILT  GE+
Sbjct:    8 YVPDGPDAQRIAAVIPYYRFKSIDRFYDVGGLVGDVEMFQLCIQILTHRYSGMDIDCVGGLDARGFLLGPPLALALKKPFFMLRKKGKMPDVVVGGSYSKEYKGDDAQGEDQLCIQRRAVQQGTRVLLIDDLIATGGTMLAAVELVKGQGGVVVEFACVVELKALKGTQRVQEQHPEIAAWSLISENILTRPGEQ 202
[Close]
BLAST of Ec-28_000520.1 vs. uniprot
Match: A0A7S3UWS1_HETAK (Adenine phosphoribosyltransferase n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWS1_HETAK)

HSP 1 Score: 255 bits (651), Expect = 6.530e-80
Identity = 124/195 (63.59%), Postives = 149/195 (76.41%), Query Frame = 1 
Query:   52 TYMPDGPEAQRIARTIPFYPFKGIDRFYDIGGMCADPEAFALAVKIFADRYRGMKIDSIGGFDARGFILGPPVALALNIPFFMLRKKGKMPNVIDGAAYSKEYKGDDGAGQDALCVQRSAATAGQRVVLVDDLVATGGTLMAGVDLVKGLGAEVVECACMIELKALNGVGKLHERHADVPVWSLISENILTVKGE 636
            TY  +GP AQRIA +IP++PFKGIDRFYDIGGM A PE F LA+  + D+Y+ + I SI GFDARGFILGPP+ALAL  PF MLRK GKMPN I G+ Y KEY+GD+ AG D L +QR A   G RV+LVDDLVATGGTL+AG++LVK LG  VVECACM+EL+AL    ++ E+H ++ VW LISE ILT  GE
Sbjct:   22 TYTTNGPVAQRIASSIPYFPFKGIDRFYDIGGMLAHPEIFQLAIDSYVDKYKDIDITSIAGFDARGFILGPPIALALKKPFIMLRKAGKMPNAITGSEYKKEYEGDNAAGGDTLGIQRGAVKPGDRVLLVDDLVATGGTLLAGIELVKQLGGSVVECACMVELQALGAANRIAEQHPEIAVWGLISEQILTRDGE 216
[Close]
BLAST of Ec-28_000520.1 vs. uniprot
Match: A0A6U1LX89_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1LX89_9STRA)

HSP 1 Score: 250 bits (638), Expect = 1.060e-77
Identity = 120/193 (62.18%), Postives = 148/193 (76.68%), Query Frame = 1 
Query:   55 YMPDGPEAQRIARTIPFYPFKGIDRFYDIGGMCADPEAFALAVKIFADRYRGMKIDSIGGFDARGFILGPPVALALNIPFFMLRKKGKMPNVIDGAAYSKEYKGDDGAGQDALCVQRSAATAGQRVVLVDDLVATGGTLMAGVDLVKGLGAEVVECACMIELKALNGVGKLHERHADVPVWSLISENILTVKG 633
            Y PDGP A+ IA TIP+YPFKGI+RFYD+GGM A P  F  A+  FA RY  + IDSIG  DARGFILGPP+ALALN P FM+RKKGKMPN I G+ Y KEYKGD+ AG DAL +Q+ +   G RV+L+DDLVATGGTL+A ++LV+ +G +VVECACM+ELK L+   K+ E+H +  VW LISE++LTV G
Sbjct:   42 YTPDGPVAREIALTIPYYPFKGIERFYDVGGMLAQPSVFQKAIDAFAARYSDLNIDSIGCIDARGFILGPPIALALNKPCFMVRKKGKMPNTITGSDYRKEYKGDNQAGADALSIQKHSVKTGDRVLLIDDLVATGGTLLAAIELVEAVGGQVVECACMVELKFLDARTKIKEKHPNTEVWGLISEDVLTVAG 234
[Close]
BLAST of Ec-28_000520.1 vs. uniprot
Match: A0A7S3JTN3_9STRA (Adenine phosphoribosyltransferase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JTN3_9STRA)

HSP 1 Score: 240 bits (613), Expect = 1.440e-74
Identity = 119/196 (60.71%), Postives = 149/196 (76.02%), Query Frame = 1 
Query:   49 ETYMPDGPEAQRIARTIPFYPFKGIDRFYDIGGMCADPEAFALAVKIFADRYRGMKIDSIGGFDARGFILGPPVALALNIPFFMLRKKGKMPNVIDGAAYSKEYKGDDGAGQDALCVQRSAATAGQRVVLVDDLVATGGTLMAGVDLVKGLGAEVVECACMIELKALNGVGKLHER-HADVPVWSLISENILTVKG 633
            E Y+PDG  A+RIA+  P++PFKGIDRFYDIGG  ADPEAF+LAV++  +RYR ++ +SIGG DARGFILGPPVALAL  PFFMLRKKGKMPN I G++YSKEY+G D  G     + R A   G +V+L+DDLVATGGTL+A +DLVK  G  V+E AC++ELK LN   K     H DVP+W+++SE+ILT+ G
Sbjct:    5 EEYVPDGAIARRIAKVTPYFPFKGIDRFYDIGGFLADPEAFSLAVEVLTERYRQVEFNSIGGLDARGFILGPPVALALKKPFFMLRKKGKMPNCILGSSYSKEYEGTDSLG-----IPRGAVKPGDKVLLIDDLVATGGTLIAAIDLVKRCGGSVIEAACVVELKCLNAAEKFKASGHQDVPIWAMMSESILTLDG 195
[Close]
BLAST of Ec-28_000520.1 vs. uniprot
Match: A0A7S4A614_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A614_9STRA)

HSP 1 Score: 235 bits (600), Expect = 7.230e-72
Identity = 113/196 (57.65%), Postives = 148/196 (75.51%), Query Frame = 1 
Query:   49 ETYMPDGPEAQRIARTIPFYPFKGIDRFYDIGGMCADPEAFALAVKIFADRYRGMKIDSIGGFDARGFILGPPVALALNIPFFMLRKKGKMPNVIDGAAYSKEYKGDDGAGQDALCVQRSAATAGQRVVLVDDLVATGGTLMAGVDLVKGLGAEVVECACMIELKALNGVGKLHER-HADVPVWSLISENILTVKG 633
            + Y PDGP A+RIA   P++PFKGI +FYDIGG   DPEAFAL V++  +RYR   I SI G DARGF+LGPP+ALAL  PFFMLRKKGKMPNV+ G AY+KEY     AG DAL + R A +AG +V+++DDLVATGGTL+A ++L+K    ++VECAC++ELK L+  G   ++ H DVP+W+++SE+ILT+ G
Sbjct:   58 DAYTPDGPVAKRIASVTPYFPFKGIPKFYDIGGFLKDPEAFALVVEVLVERYRNEDITSICGLDARGFVLGPPLALALKKPFFMLRKKGKMPNVVTGEAYAKEY-----AGNDALSIPRGAVSAGDKVLVIDDLVATGGTLLAAIELIKKFDGKIVECACVVELKFLDARGAFDKKGHGDVPIWAMMSEDILTLDG 248
[Close]
BLAST of Ec-28_000520.1 vs. uniprot
Match: A0A7S1XJV3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJV3_9STRA)

HSP 1 Score: 234 bits (597), Expect = 2.100e-71
Identity = 117/199 (58.79%), Postives = 145/199 (72.86%), Query Frame = 1 
Query:   49 ETYMPDGPEAQRIARTIPFYPFKGIDRFYDIGGMCADPEAFALAVKIFADRYRGMKIDSIGGFDARGFILGPPVALALNIPFFMLRKKGKMPNVIDGAAYSKEYKGDDGAGQDALCVQRSAATAGQRVVLVDDLVATGGTLMAGVDLVKGLGAEVVECACMIELKALNGVGKLHER-HADVPVWSLISENILTVKGEES 642
            + Y  DGP A++IA   P++PFKGIDRFYDIGG   DPEAF LAV++  +RYR   + SIG  DARGF+LGPPVAL L +P FMLRKKGKMPN + GAAYSKEY     AG D+L + R A +AG +V+L+DDLVATGGTL A V+LVK +G EVVECAC++ELK LN      ++   DVP+W+L+SE IL + G  S
Sbjct:   59 DEYQQDGPVARKIAAVTPYFPFKGIDRFYDIGGFMKDPEAFRLAVEVLTERYRNAGLTSIGCIDARGFVLGPPVALNLGLPCFMLRKKGKMPNAVTGAAYSKEY-----AGNDSLSIPRGAVSAGDKVLLIDDLVATGGTLAASVELVKVMGGEVVECACVVELKFLNAAAMFEQKGFGDVPIWALMSEEILELDGMAS 252
[Close]
BLAST of Ec-28_000520.1 vs. uniprot
Match: A0A7S3Z878_9EUKA (Adenine phosphoribosyltransferase n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z878_9EUKA)

HSP 1 Score: 225 bits (574), Expect = 1.930e-68
Identity = 112/196 (57.14%), Postives = 139/196 (70.92%), Query Frame = 1 
Query:   49 ETYMPDGPEAQRIARTIPFYPFKGIDRFYDIGGMCADPEAFALAVKIFADRYRGMKIDSIGGFDARGFILGPPVALALNIPFFMLRKKGKMPNVIDGAAYSKEYKGDDGAGQDALCVQRSAATAGQRVVLVDDLVATGGTLMAGVDLVKGLGAEVVECACMIELKALNGVGKLHER-HADVPVWSLISENILTVKG 633
            E Y  +GP A++IA  +P++PFKGID+FYDIGG    PE F L + +F  RY+ + +DSI GFDARGF++GPP+ALAL  PF MLRKKGKMPN I G  Y KEY     AG D L + R +   G RV+L+DDLVATGGTL AG++LVK LG  V ECAC++ELK LN   KL    H DVPVW+L+ E+ILT+ G
Sbjct:   24 EEYSQNGPVAKKIASVVPYFPFKGIDKFYDIGGFLKHPEIFQLVIDVFVARYKAIGVDSIAGFDARGFVIGPPIALALKKPFIMLRKKGKMPNSISGTEYGKEY-----AGTDVLTIPRGSVKKGDRVLLIDDLVATGGTLSAGIELVKLLGGVVAECACIVELKFLNARKKLDGLGHKDVPVWALMDESILTLDG 214
[Close]
BLAST of Ec-28_000520.1 vs. uniprot
Match: A0A7R9U3S7_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3S7_9STRA)

HSP 1 Score: 223 bits (569), Expect = 2.990e-67
Identity = 115/196 (58.67%), Postives = 137/196 (69.90%), Query Frame = 1 
Query:   49 ETYMPDGPEAQRIARTIPFYPFKGIDRFYDIGGMCADPEAFALAVKIFADRYRGMKIDSIGGFDARGFILGPPVALALNIPFFMLRKKGKMPNVIDGAAYSKEYKGDDGAGQDALCVQRSAATAGQRVVLVDDLVATGGTLMAGVDLVKGLGAEVVECACMIELKALNGVGKLHER-HADVPVWSLISENILTVKG 633
            E Y  DGP AQRIA   PF+PFKGI+RFYDIGG   DPEA  L V++  +RYR  ++ SIG  DARGF+LGPPVALAL +P FMLRKKGKMPN I G AYSKEY GDD     +L + R A   G RV+L+DDLVATGGTL A V+LV  +G  VVECAC +EL+ LN      E+    VP+W+L+SE IL + G
Sbjct:   56 EEYTQDGPIAQRIANVTPFFPFKGIERFYDIGGFMRDPEALRLVVEVLTNRYRDQELTSIGCIDARGFVLGPPVALALGLPCFMLRKKGKMPNAITGKAYSKEYAGDD-----SLSIPRGAVQPGDRVLLIDDLVATGGTLAASVELVHLMGGVVVECACAVELRFLNASKLFEEKGFGQVPIWALMSEEILQLDG 246
[Close]
BLAST of Ec-28_000520.1 vs. uniprot
Match: A0A4D9CQB5_9STRA (Pribosyltran domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CQB5_9STRA)

HSP 1 Score: 221 bits (564), Expect = 4.420e-67
Identity = 107/187 (57.22%), Postives = 138/187 (73.80%), Query Frame = 1 
Query:   73 EAQRIARTIPFYPFKGIDRFYDIGGMCADPEAFALAVKIFADRYRGMKIDSIGGFDARGFILGPPVALALNIPFFMLRKKGKMPNVIDGAAYSKEYKGDDGAGQDALCVQRSAATAGQRVVLVDDLVATGGTLMAGVDLVKGLGAEVVECACMIELKALNGVGKLHERHADVPVWSLISENILTVKG 633
            + ++IA  IP+Y FKGIDRFYDI G+   P      ++I  +RY+GM ID IGGFDARGF+LG P+AL L+IPFFMLRK+ K+PN + G +Y+KEY+GDDG G DALC+ R+A   G +V+LVDDL+ATGGTL+AG+DLV      VVE ACMIEL  L G  K+ ER+ +V VWSL+SE+ L  +G
Sbjct:   15 DKRKIAAVIPYYAFKGIDRFYDISGLLLSPALLRRTIEILVERYKGMAIDKIGGFDARGFLLGTPLALELDIPFFMLRKQSKLPNSVTGDSYTKEYEGDDGKGGDALCISRTAINPGDKVLLVDDLIATGGTLLAGLDLVHARQGVVVEAACMIELGFLEGGKKVRERNPNVTVWSLLSEDHLQTRG 201
The following BLAST results are available for this feature:
BLAST of Ec-28_000520.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K4H0_9PHAE5.500e-13898.52Adenine phosphoribosyltransferase n=2 Tax=Ectocarp... [more]
A0A835ZL34_9STRA5.390e-8363.08Phosphoribosyltransferase-like protein n=1 Tax=Tri... [more]
A0A7S3UWS1_HETAK6.530e-8063.59Adenine phosphoribosyltransferase n=3 Tax=Heterosi... [more]
A0A6U1LX89_9STRA1.060e-7762.18Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3JTN3_9STRA1.440e-7460.71Adenine phosphoribosyltransferase n=1 Tax=Aureoumb... [more]
A0A7S4A614_9STRA7.230e-7257.65Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S1XJV3_9STRA2.100e-7158.79Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S3Z878_9EUKA1.930e-6857.14Adenine phosphoribosyltransferase n=1 Tax=Lotharel... [more]
A0A7R9U3S7_9STRA2.990e-6758.67Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A4D9CQB5_9STRA4.420e-6757.22Pribosyltran domain-containing protein n=3 Tax=Mon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:520416..526441 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score332.4
Seed ortholog evalue1.5e-88
Seed eggNOG ortholog2880.D7G9D6
Preferred nameAPRT
Length1237
KEGG rclassRC00014,RC00039,RC00063
KEGG koko:K00759,ko:K10781
KEGG ReactionR00190,R01229,R01706,R04014,R04378,R08157,R08158,R08159
KEGG Pathwayko00061,ko00230,ko01100,ko01212,map00061,map00230,map01100,map01212
Hectar predicted targeting categoryother localisation
Gene idEc-28_000520.1
GOsGO:0003674,GO:0003824,GO:0003999,GO:0006139,GO:0006144,GO:0006168,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009113,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0034641,GO:0034654,GO:0042440,GO:0043094,GO:0043096,GO:0043101,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046083,GO:0046084,GO:0046112,GO:0046148,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.adenine phosphoribosyltransferase activity
EggNOG OGsCOG0503@1,KOG1712@2759
EC2.4.2.7,3.1.2.14,3.1.2.21
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01004,ko04147
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_000520Ec-28_000520Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_28 520416..526441 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000520.1Ec-28_000520.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_28 520459..525853 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000520.1.1Ec-28_000520.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 520416..520561 +
Ec-28_000520.1.2Ec-28_000520.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 523865..523925 +
Ec-28_000520.1.3Ec-28_000520.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 524122..524227 +
Ec-28_000520.1.4Ec-28_000520.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 524821..525009 +
Ec-28_000520.1.5Ec-28_000520.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 525707..526441 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0005205UTR:Ec-28_000520.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_28 520416..520458 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000520.1CDS:Ec-28_000520.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_28 520459..520561 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0005203UTR:Ec-28_000520.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_28 525854..526441 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-28_000520.1 ID=Ec-28_000520.1|Name=Ec-28_000520.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=202bp
MEETYMPDGPEAQRIARTIPFYPFKGIDRFYDIGGMCADPEAFALAVKIF
ADRYRGMKIDSIGGFDARGFILGPPVALALNIPFFMLRKKGKMPNVIDGA
AYSKEYKGDDGAGQDALCVQRSAATAGQRVVLVDDLVATGGTLMAGVDLV
KGLGAEVVECACMIELKALNGVGKLHERHADVPVWSLISENILTVKGEES
S*
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spliced messenger RNA

>Ec-28_000520.1 ID=Ec-28_000520.1|Name=Ec-28_000520.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1237bp|location=Sequence derived from alignment at chr_28:520416..526441+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
TCAAGCCGGGCATCACGCACAAGCACCGACGCACCCTTTGCCTATGGAGG
AAACGTACATGCCAGATGGGCCAGAGGCTCAGCGTATAGCGAGGACAATC
CCGTTCTACCCGTTCAAAGGAATTGATCGATTCTACGATATCGGAGGCAT
GTGCGCTGACCCCGAAGCCTTCGCTTTGGCCGTCAAGATCTTCGCTGATA
GATACAGGGGCATGAAGATTGACTCCATTGGTGGTTTCGACGCTCGAGGC
TTCATCCTCGGCCCGCCGGTGGCTCTCGCGCTCAACATCCCGTTCTTCAT
GCTGAGGAAAAAGGGGAAAATGCCAAACGTCATCGATGGAGCGGCGTACT
CCAAGGAGTACAAGGGGGACGACGGGGCCGGCCAGGACGCCTTGTGCGTG
CAGCGCTCGGCGGCCACGGCGGGGCAGCGGGTAGTTCTTGTGGACGACTT
GGTGGCAACGGGGGGCACGCTGATGGCCGGAGTCGACCTCGTGAAAGGGT
TGGGTGCTGAGGTGGTGGAGTGCGCGTGTATGATCGAGCTGAAAGCGTTG
AACGGCGTTGGCAAGCTGCACGAGCGCCATGCGGACGTACCTGTGTGGTC
GCTCATCAGCGAGAACATCCTCACCGTCAAGGGCGAGGAGAGCAGCTAGG
CTAGTTTAGCAGCGTAGTTGCGCACGATGCAGGGGACGTCTATCTGCGCG
TGTGGTCAACACCTAGGGATCTTGTTCCCTTTTTGTGCAGGCAGACGTGA
ACGCACAAAAAGTGGCCGTGCTGGTTTTTGGCGCAACGGCACCGGCGCCT
AAATGTGTTTTTTCTTGTGCGTGCGACACTTCTGCCTACGAACTGCTCGC
TGTAGATCTAGACTGACCTAGTAGTCGTCATTAACGGAGCATTCGCGCAG
CTCCGCGGTAAATTTACTCCTTCATTTGTAGAGTTCATGACCGTCTCGAC
AACAGTGAGGATGGAGCTACAACAATCAACCGTGGACGGACTTTCAGTGC
ATACAAGCCTGTGCACACCACTGTTTAAAATGCGCAACGCCAGCGAAAGA
CTACATGCACACACCCTCTGTCGAGATATGTCGAAGTCTTCACAATGAGT
CGAGGGACACCTGTGGGATAGTGGACTTCGCGAGTCTATGCATAATGCAT
ACCACATGCGTACATGCGCACATGCGCACAACAACTTTTGTTCGTATCAA
TGCATGTCATCGCAAAGGGACTAAACTATACATTGAC
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protein sequence of Ec-28_000520.1

>Ec-28_000520.1 ID=Ec-28_000520.1|Name=Ec-28_000520.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=202bp
MEETYMPDGPEAQRIARTIPFYPFKGIDRFYDIGGMCADPEAFALAVKIF
ADRYRGMKIDSIGGFDARGFILGPPVALALNIPFFMLRKKGKMPNVIDGA
AYSKEYKGDDGAGQDALCVQRSAATAGQRVVLVDDLVATGGTLMAGVDLV
KGLGAEVVECACMIELKALNGVGKLHERHADVPVWSLISENILTVKGEES
S*
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mRNA from alignment at chr_28:520416..526441+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-28_000520.1 ID=Ec-28_000520.1|Name=Ec-28_000520.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=6026bp|location=Sequence derived from alignment at chr_28:520416..526441+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
TCAAGCCGGGCATCACGCACAAGCACCGACGCACCCTTTGCCTATGGAGG
AAACGTACATGCCAGATGGGCCAGAGGCTCAGCGTATAGCGAGGACAATC
CCGTTCTACCCGTTCAAAGGAATTGATCGATTCTACGATATCGGAGGTAC
GATCTACCATTTTGGTTGTCAGCAAGTAGTACTGACTGTATCGGTGCATG
CATGGATTGGGGCATCATCCGCGTTGAGAGAGCTGCAGCGCGTACAAGAG
ATTATGGCGGTGATCATCTTGCAATCTCTTTCTGCATTCCGTACCCCCTA
GTGGTCATCTATTTACTGCTGTAATGTAAAAGCGACCCCATGCCCTTGAA
CCCTACAGCAGGAGCAGCAGCAGTGGTGCACAAGTACACCAGCTAGACTA
GTTGTTGCTGCTGTAATTTCTTTTTTCGGGACTGTCGCGTTCTGCCGACC
GCTCCATGTGTTTTTTTATTACAAGTCCCAAAACCAAGTTCACACAGCAT
AAATTGTCCGCAGGAGGTACGGCCTCTGTTCGCACTAATGTAGCAGTTCT
ACTGCTGAAACTGCGGGAAACGCCAAATCTACGTAAGGAGGCAAGCTGAC
TCTAAAATTAACAGGGATGACTGCTACTACTCATTCGGCAGAGGCAGCGC
TATCGCCGGCGACAAAGCCGAATTCTTGAAGGCTCATGTTGCACACCGAT
GTGGTTCTCAGGAGCTGAGACACAGGCGCTGTTGGTGTGGTGTGTGGCTG
GCAGGGGCTGGTGTGTGTGTGGTGTGTGGTTGTGATGGCAGTGGGGGGCG
ACAGGAGTAGGCCCATAGCAGGCGCCTCCGGGGAGCGAAAAAAGGGGGTA
GACAGCTGGGAAACTGACCCCCCCCGGTAAAAAGGGGGCCAAAATATCGA
GTATCGAATACCGATATAAATACCGATTCGTATCGACAAATATCGGCGTG
GAAACCGGCAATACCGATACTGCGTATCGGCGATATATATCAGTTTTGTA
TCGATATTCGATACCCAATATCCAACACTGTTTTTTTAGGTCAGAGAGTT
GATGGGTATCCATACAGTGGGGGTCCCTCTATAGTGCGGGTATGTGACAT
GCGAAAAAAACCGCACTGTAGAGGGCACCCGCATTATATGCTTTCGGGCC
TGAATAGTGCGGGAAGGCGCACTATTCAGGGTTTCAGAACCCTCAATAGT
AGTGTGGGTAGGCGCACTATCCACGAAATCACTAGGTTTTTGCATAGGAC
GTAGCCAAAAGCGAGGGATACTGTATGCAGGTGGCACGGTAGTGCATGTA
ACAAGTGAGGTAGGGAAAAATTGCCGTATCTCTACGGATAGAAGCCTGCA
TCCGTTCGCAGGTGAGCAGAGAACAGCAAAAGTTGCACATACATCGGGAT
GTACTGCACAGCAGCGGCAAACATTATACAACCACATCCTGTACTGTACA
GAGATGTTACGCAATGTACGCTCTGTACCAAAAAGGAAGGCTGCGCACAG
CCCATGTTGTTGTTCCTTGTTCCATTCTGCATTGAAAGTTCCGCTTGCAC
ATTAAAAAAACAAGGCCTCCAAAATGAAACCTGAACTTGCCAAATACGAA
ACACGTCTGTTCACAAACGAAACGAACACCTTTTCAACACGACCCAGACA
CACCCACGGAGAAAAAAAGAGAGGGGGGACACTCCAAGAAAAATATAATA
GAAACAAGGACCCCAAAAAAAATCCTACATTGTACTTCCCGCACGTTCTA
CCTCAAGTTTTCCAAGAAAACCCCACACAACACAACGCCATCTACGTTTG
GGGGCGGCGGCTTTGAAGAAAAAACGGCAAAGTGAAACTCGCAGACAGTT
GACTCATTCAAGCACCCGGCAGATCCACTACCAGCAAATTACAGCAGGAG
CTGCGTGGGGCAAAACGGCTGGCTGATTGCTCTACGCATAAAAAAACTCC
CTAACATCGGCCTGGCGCGACGGCTTCGATGCATGCGCTTCGATCATCAA
CATCCGTGCCCTCTTGAGCAAGTAGCTGGCCTCGTTCAAGCTGCACCCTG
CCGCGTAGCTTTCCAGGGGGGCGAAGTGTTTGGAAAGTTTGGAGGAGAAA
CACGCCGGACAGAGGCGGTTCATTTCGTTCTCGCCGTCCTCCTCCACCTC
GCCGCATATACCATGCAGTCTGCCGCCACATCCTCCTCGACATTGGTGGC
CGTCGGGGGCTTTGGGTGTGAGGTTGCTAAGTTGGCAGAGTTCGCCTGCT
GCACACGGCATCCTGTGCCTCTGCTGCTGTTCCTGTGGCCAGTAGGGGTA
TGCTGCTGCTGCTAGGCGTGGCCGGTAGGGGTATGTGTGTGTGTGTGTTT
TTTATTACATTAGCATCGACCGCGCTAACCGGCTGACCAATGAAAAGACG
TCAGTGCCAACGGGTAAAAATCAAGGTCCCTGGAATGGGGGCCAAAATTC
GAAAAATGCGCAATGCGCTAAATGCGAACGCCAGTACGACTGTGTGTGTT
TGTGTCGGGAAAATGTGTGGGTTGGCTATCTAGGTTTGACCGCATCTAGG
CGGGTGGTGACGTGGCGTGACGTCAAATCCGCACTATATAGGGTCTTGAG
AGGGGTCAAACCCGCACTATAGAGGGGTGCCCCCAATAGTGCGGCACCCG
CACTTTAGAGGACTCAATTTGTGCCTAGCGATTTCACCGCAAATTAGCGG
GCACCCGCACTATATAACCCGCACTATAGAGGGACCCCCACTGTACGTCG
ATATGTCGATAACCGTACCATGTGAAGGGGGAGATGCCACACACAGGATA
AGGGTCGGGTTTGTGTCCAGGGGTAAGTTTGAGATGTGGTTCCTTCGCGT
ACGTTAGTCAACAATAATCGGCGAACATCGAGAGCGTCGGGAGGGGAGTT
CTGGTGTTGTCTACACCAACGGCGAACGATAACATTTGAAAGAGTTGGCA
ATATTTCGGTTTACAGCAGTCTGGGCTGCAGTTGTCCTCCTTTCTGCAAC
AAGCATTGCTGTTCTGGCGCATTTTTTTTTAACAAACATGAGTTTCTGCC
CGGCGTGTCAACTGCTTCTCACCTGCCAAAACTGGCCGTAGGTGCTCCAT
GTACTTTGTAGCTGACTTACTCTACGATCAAGTGTCGTAAGCAAATTTAA
GCCAGATATAAGGTGAACTAAAAGTCCTGTGTGCAACATACCGTGGCGGC
CGTGATGACACCGTCGGAACGAAACCTATTTGCCCGGTCACTGTTGATAG
GCTCACAATACAACCTACTTTGCAGGACACGTTTTGATTTGTCCACACTC
CAACGTGGAATCCCACATGACTCAGAAGCTATAAATGCAACGGCAACGTT
CAATTCCTCGTCCAATCGCGAATGGTGATCACTCGTCCAACTCAGCCAGT
GGTGCCAACCCTCTCTGTAACGCCTTTGTTTTCTCATGGCGCTCACCAGG
CATGTGCGCTGACCCCGAAGCCTTCGCTTTGGCCGTCAAGATCTTCGCTG
ATAGATACAGGTACATGCCATTGAAACGTTCACCTCGAAGGAACAGTCGG
TTGCTTCTACGCGCCACTGGTTTCACGTTCACGTACCCCGGTACATAAAT
GCGCGGACTCGCGACGCCTTTTTTTCGTCGTGGAAATGAACCAACCCTCC
ATTCGATTGATTGTCCCGCTTTCATCAACCTTCTCCCGCGTAAAACCGTT
TTCCAGGGGCATGAAGATTGACTCCATTGGTGGTTTCGACGCTCGAGGCT
TCATCCTCGGCCCGCCGGTGGCTCTCGCGCTCAACATCCCGTTCTTCATG
CTGAGGAAAAAGGTGGAAGTACATTCGTTTCCCTGTCCGAAGAATCAGTA
AGCGCCTTCGTAGATTGTGCTCCTTCTTGTCCGCGTGAACGGAAAAGAAT
GGATGGGTGACAAGGCTTTCGTCTGCCAACGTCGCGGCACGGATCGTCCT
GTTGGGGGCCAACTCAAGGGGGTGCCGGAAGACGGACGTTGCCGAGTCAA
CTCAAGGCGGCACAGCAAAAACCTCGAAGTTTCGGTCTTGCAATAATTGG
ATGTATGTACGCATATGCTAGTACATGAATAATTGGCAGCAACGCCCCGG
CCAAACCCCGGACGCGCCGCCGGAGGTGCGCCAGGTAACCGCCGTCGCAG
CAGTCGATTTCTCTTCTCCCTTGAAGCAGGCCGCCCACTCCCCGCCCCCC
TCTTTGCACCATCGTCGCCGACAAAACCTCGTTCGTGCTGATCACAACTT
GATTTCGACACGCAAACTCTCGTCATCCTTCGTCCCCCACCTACCCCGCC
TCTCAGAGAGGACGCGAGGTCAAAACATTATGCACACGGCATGCAAAACA
TGAGTAGTACTCCCCCGCTCGCACCGTGCGCGCTGAATATTCCCGTTCCC
CCCAGGGGAAAATGCCAAACGTCATCGATGGAGCGGCGTACTCCAAGGAG
TACAAGGGGGACGACGGGGCCGGCCAGGACGCCTTGTGCGTGCAGCGCTC
GGCGGCCACGGCGGGGCAGCGGGTAGTTCTTGTGGACGACTTGGTGGCAA
CGGGGGGCACGCTGATGGCCGGAGTCGACCTCGTGAAAGGGTTGGTGAGT
CGGATCTACGGCTGCGATATACCTACCGCTGCACTAGAACATGTGCAGTA
GTAGTAGCGCATCTGCAGGCCGGCTTGTTGTGTGTGGCGTTCATTTTGTG
GCGAAGATCGACGGCAGCGATGTCGGGGTGAAGGTTGGGTTTGGGCGGTG
TTAAGGGAGAGGGCTACTGCTATGTCGCCGCCATATCCATGAGAAGCTGG
CTGCCGCTGGTGGCGATCGATGGGACCATTCGTCGCAGCAGTTGGGGTTG
AGTTCTATCCTCCAGATTGTTTGTTGATGGAGCTCTGGAGCTTTTCTTTC
CATGGGCAGCCTTGGTGGTTCGTTCATTCGGGCACCGGGACTGGATGGTG
GTTGTAATCGATTTTTTAGTCACAACATGAGTCACGCGTATACGGAGAAA
AGAGGAGGCTAACTCGTTTCAACGTTGTTGGTCGTGGTTTTTGCACGTAC
TACTGCGGTGGTTGTAGCCGTTGTGATCCTGAAGATGCGTCTGGCCATTC
TTTTCTCCAGTGCTTGCGCATCAGCACTAATCCTGCCTGGACAGAAACTA
CCCCCACGGTGCCGGGCCAGAACCTCATTGCATGTGTGCAAAACCATTAG
TCTAGGCTATCGAGAGATGGGGTAGTACGAAATTCATGCAGAACTGCATA
CATACGTCCCGTCCACCTGTCTGTGAAATTTTCGCGTGCAGGGTGCTGAG
GTGGTGGAGTGCGCGTGTATGATCGAGCTGAAAGCGTTGAACGGCGTTGG
CAAGCTGCACGAGCGCCATGCGGACGTACCTGTGTGGTCGCTCATCAGCG
AGAACATCCTCACCGTCAAGGGCGAGGAGAGCAGCTAGGCTAGTTTAGCA
GCGTAGTTGCGCACGATGCAGGGGACGTCTATCTGCGCGTGTGGTCAACA
CCTAGGGATCTTGTTCCCTTTTTGTGCAGGCAGACGTGAACGCACAAAAA
GTGGCCGTGCTGGTTTTTGGCGCAACGGCACCGGCGCCTAAATGTGTTTT
TTCTTGTGCGTGCGACACTTCTGCCTACGAACTGCTCGCTGTAGATCTAG
ACTGACCTAGTAGTCGTCATTAACGGAGCATTCGCGCAGCTCCGCGGTAA
ATTTACTCCTTCATTTGTAGAGTTCATGACCGTCTCGACAACAGTGAGGA
TGGAGCTACAACAATCAACCGTGGACGGACTTTCAGTGCATACAAGCCTG
TGCACACCACTGTTTAAAATGCGCAACGCCAGCGAAAGACTACATGCACA
CACCCTCTGTCGAGATATGTCGAAGTCTTCACAATGAGTCGAGGGACACC
TGTGGGATAGTGGACTTCGCGAGTCTATGCATAATGCATACCACATGCGT
ACATGCGCACATGCGCACAACAACTTTTGTTCGTATCAATGCATGTCATC
GCAAAGGGACTAAACTATACATTGAC
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Coding sequence (CDS) from alignment at chr_28:520416..526441+

>Ec-28_000520.1 ID=Ec-28_000520.1|Name=Ec-28_000520.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=606bp|location=Sequence derived from alignment at chr_28:520416..526441+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGAGGAAACGTACATGCCAGATGGGCCAGAGGCTCAGCGTATAGCGAG
GACAATCCCGTTCTACCCGTTCAAAGGAATTGATCGATTCTACGATATCG
GAGGCATGTGCGCTGACCCCGAAGCCTTCGCTTTGGCCGTCAAGATCTTC
GCTGATAGATACAGGGGCATGAAGATTGACTCCATTGGTGGTTTCGACGC
TCGAGGCTTCATCCTCGGCCCGCCGGTGGCTCTCGCGCTCAACATCCCGT
TCTTCATGCTGAGGAAAAAGGGGAAAATGCCAAACGTCATCGATGGAGCG
GCGTACTCCAAGGAGTACAAGGGGGACGACGGGGCCGGCCAGGACGCCTT
GTGCGTGCAGCGCTCGGCGGCCACGGCGGGGCAGCGGGTAGTTCTTGTGG
ACGACTTGGTGGCAACGGGGGGCACGCTGATGGCCGGAGTCGACCTCGTG
AAAGGGTTGGGTGCTGAGGTGGTGGAGTGCGCGTGTATGATCGAGCTGAA
AGCGTTGAACGGCGTTGGCAAGCTGCACGAGCGCCATGCGGACGTACCTG
TGTGGTCGCTCATCAGCGAGAACATCCTCACCGTCAAGGGCGAGGAGAGC
AGCTAG
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Synonyms
The feature 'Ec-28_000520.1' has the following synonyms
Synonym
Esi0098_0007
Esi_0098_0007
APRT-like