Ec-28_000500.3 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-28_000500.3
Unique NameEc-28_000500.3
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length114
Homology
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BLAST of Ec-28_000500.3 vs. uniprot
Match: D7G9D4_ECTSI (Spherulin 4 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9D4_ECTSI)

HSP 1 Score: 268 bits (684), Expect = 1.080e-75
Identity = 223/482 (46.27%), Postives = 255/482 (52.90%), Query Frame = 1 
Query:  286 QGSGSQVLCYVATTYGNKTTGSVEEEITAYQSKLASSSTPARRQTSSTFPSRPRLRSWVTRTTSRREAARSAG------------NQRHFHAAPKHASPAQRHRAGREA*VIQPFVDKAYCKGWGTVYVTDDLFDEATLGTTRRPSGQPLSKPRGTSPPWSPAATAASRSSPPS-------------------------LATTTPHGGHHGDR*PGGLRRQDHGRYERRDHRDRRVYRQGCRGQGRRGEVLCYIEADKYGNDLATLEEVVETYTFFPLNEICGGFFFGAFNILLAIEDMPGMQSLYLKTQKPSSSRPWCSHPRSRTTRTASSRATASATTSWKR*R*LVQHEQLGQHH--------QLRAPVGRRYDRADLVALAESLTVGLGDGATAGEIVVAEAIDGGSVIPEAPEPNESTAALVTGYAGAPEMATGRERDGRPAAGRQSVGYRNSNRTTLVKVKESV*LLRPEYKPHET 1596
            +G+G+++LCYVATTYGNKTTGSVEEEITAYQS+        +      F   P     V    +  +A R  G            N    H+A + A   +         +IQPFVDKAYCKGWGTVYVTDDLFDE          G P   P    P +  A   ASR+ P                           +AT  P  G +GDR    +  +     E  +  DR       R  G   +VLCYIEADKYGNDLATLEEVVETYTFFPLNEICGGFFFGAFNILLAIEDMPGMQSLYLKTQK          P     +  S    +S + S+      V+ ++   +             P        DLVALAESLTVGLGDGATAGEIVVAEAIDGGSVIPEAPEPNESTAALVTGYAGAPE    RER+ RPA      G R S R              PE+KPH+T
Sbjct:   90 KGAGAKMLCYVATTYGNKTTGSVEEEITAYQSEARVVFNTGQAADEQYFSFSPPAE--VLGYENYFKAVRQLGVPETSDISTPPQNMLLLHSATELAEKPE---------LIQPFVDKAYCKGWGTVYVTDDLFDE----------GNPWDNP----PTFWTAFIEASRNIPTVESCGDGGLKIIAPLLGNDDADTEAIMATADP--GDYGDRIMVAMNVEI---TETGESTDRAA---AVRDAG--AKVLCYIEADKYGNDLATLEEVVETYTFFPLNEICGGFFFGAFNILLAIEDMPGMQSLYLKTQKTFLQPTVVFAPE---VQDYSDGFESSYSFSYD----FVEVDEDDWYSTNNWDSTTNFELPWEDVMTETDLVALAESLTVGLGDGATAGEIVVAEAIDGGSVIPEAPEPNESTAALVTGYAGAPENGD-RERERRPA------GRRPSERWL------------PEFKPHDT 510
The following BLAST results are available for this feature:
BLAST of Ec-28_000500.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G9D4_ECTSI1.080e-7546.27Spherulin 4 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:503644..516088 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length3048
Hectar predicted targeting categoryother localisation
Gene idEc-28_000500.3
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_000500Ec-28_000500Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_28 503465..516092 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000500.3Ec-28_000500.3Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_28 515206..515547 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000500.3.1Ec-28_000500.3.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 503644..503675 +
Ec-28_000500.3.2Ec-28_000500.3.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 506944..507066 +
Ec-28_000500.3.3Ec-28_000500.3.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 507726..507877 +
Ec-28_000500.3.4Ec-28_000500.3.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 508736..508813 +
Ec-28_000500.3.5Ec-28_000500.3.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 510100..510200 +
Ec-28_000500.3.6Ec-28_000500.3.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 510540..510639 +
Ec-28_000500.3.7Ec-28_000500.3.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 510852..510929 +
Ec-28_000500.3.8Ec-28_000500.3.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 511302..511434 +
Ec-28_000500.3.9Ec-28_000500.3.9Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 511945..512078 +
Ec-28_000500.3.10Ec-28_000500.3.10Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 512454..512636 +
Ec-28_000500.3.11Ec-28_000500.3.11Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 512868..512967 +
Ec-28_000500.3.12Ec-28_000500.3.12Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 513366..513448 +
Ec-28_000500.3.13Ec-28_000500.3.13Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 513780..513950 +
Ec-28_000500.3.14Ec-28_000500.3.14Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 514509..516088 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0005005UTR:Ec-28_000500.3Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_28 503644..503675 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000500.3CDS:Ec-28_000500.3Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_28 515206..515547 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0005003UTR:Ec-28_000500.3Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_28 515548..516088 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-28_000500.3 ID=Ec-28_000500.3|Name=Ec-28_000500.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=114bp
MSADRCRCACSRVVCCLLSLSLLRRRGEKAKRNTMAENNGNVKVEVVVVL
SLHPEYGFGSRLTLFPFREVRSGQVLRGNNLLAHEKPTSAFSVRWCSTVI
LASSVAGAKPLQW*
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spliced messenger RNA

>Ec-28_000500.3 ID=Ec-28_000500.3|Name=Ec-28_000500.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3048bp|location=Sequence derived from alignment at chr_28:503644..516088+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
TTTCCGCTACTCAAGCCCGAAGATGATGGGAGGGACTACGCTGTTTGCGG
TGGCGGCGGCGGGCCTCCTGAATGTCGCCGTCTCGCAAGAGTTCCCCGCG
ATGGAGTTCGTGATCCCACTGTACATCGCTCCGATGTTCGACAATGGCAC
CACCGTCACGATCGACCCGCAGTGGACGGCGCTTGCCGAGACCGCGGCGA
CGGGTGCGACCGTGTTCGGGATCCTCAACCCGGCGAGCGGGCCGGGTGAG
GTCACCGACGCCAGCTACCCGGACGTGATCGATTACGTCAAGGGAGCGGG
AGCCAAGATGCTGTGCTACGTGGCGACGACGTACGGCAACAAGACCACTG
GCTCTGTGGAGGAGGAGATCACGGCCTACCAAAGCGAAGCTCGCGTCGTC
TTCAACACCGGCCAGGCGGCAGACGAGCAGTACTTTTCCTTCTCGCCCCC
GGCTGAGGTCCTGGGTTACGAGAACTACTTCAAGGCCGTGAGGCAGCTCG
GAGTGCCGGAAACCAGCGACATTTCCACGCCGCCCCAAAACATGCTTCTC
CTGCACAGCGCCACCGAGCTGGCCGAGAAGCCTGAGCTGATCCAACCCTT
CGTGGACAAGGCCTACTGCAAGGGCTGGGGCACGGTGTACGTGACTGACG
ACCTCTTCGACGAGGGCAACCCTTGGGACAACCCGCCGACCTTCTGGACA
GCCTTTATCGAAGCCTCGAGGAACATCCCCACCGTGGAGTCCTGCGGCGA
CGGCGGCCTCAAGATCATCGCCCCCCTCCTTGGCAACGACGACGCCGACA
CGGAGGCCATCATGGCGACCGCTGACCCGGGGGACTACGGCGACAGGATC
ATGGTCGCTATGAACGTCGAGATCACCGAGACCGGCGAGTCTACCGACAG
GGCTGCCGCGGTCAGGGACGCCGGGGCGAAGGTGCTCTGCTACATCGAGG
CCGACAAGTACGGCAACGACCTGGCCACCCTCGAGGAGGTCGTGGAGACG
TATACCTTCTTCCCCCTCAACGAGATCTGCGGCGGGTTTTTCTTCGGGGC
CTTCAACATCCTTCTGGCCATCGAGGACATGCCCGGCATGCAGTCCCTCT
ACCTCAAGACCCAGAAAACCTTCCTCCAGCCGACCGTGGTGTTCGCACCC
GAGGTCCAGGACTACTCGGACGGCTTCGAGTCGAGCTACAGCTTCAGCTA
CGACTTCGTGGAAGTCGATGAAGATGACTGGTACAGCACGAACAACTGGG
ACAGCACCACCAACTTCGAGCTCCCGTGGGAAGACGTTATGACCGAGACT
GACCTCGTTGCGCTGGCGGAGTCCCTCACCGTGGGGCTGGGTGACGGCGC
CACGGCCGGCGAGATCGTGGTCGCGGAGGCCATAGACGGCGGCTCGGTCA
TCCCCGAGGCCCCCGAGCCCAACGAGAGCACCGCTGCCCTCGTCACCGGC
TACGCCGGGGCCCCGGAGAATGGCGACAGGGAGAGAGAGAGACGGCCGGC
CGGCCGCCGGCCGTCAGAGCGTTGGCTACCGGAATTCAAACCGCACGACA
CTCGTTAAGGTTAAGGAGAGCGTGTGACTGCTACGACCCGAATACAAGCC
ACACGAAACTTGGGGAAGGAATCGAGTGTTTCGAGTGTTTGGTTTGCCCT
TTCCTTTCCCTCTGCCAGATAGAAGCGTCGTCCCCTTAATACGCGTTTTG
TTCGGTGTTGTTTTTGTTTTTTTTATGTTCGGAACTTCAAATCCGTGACG
AGGCACAAAATTCAGTGGTGTAGAAATCCTCGCGTTGTGTGTGCGTGTGC
GTGTTTTTTTTAGGGGGGTCATTCGCTTGTTTCCTGGATTTGCTGGGAGT
CCTAATCCGTGTAAGGGTGGTGGCGGCGGGGCACGCGGTTGGATAGATGG
GCAGACTCACTTTTGCGTACGCACCACGACCCATTTTGTCCGTGTCCTGC
CCGGTGCGCGCGAAATTATCTTGAGCCTGTCCTTCGATGGTTTCTTGAAA
CATTTTTGTCCATCGATGACTTCTTCTTGTGTGTGAGTGGCGTTGTTGTG
CATGCGGTACACAGATGCACCACAAAAACTAGCGTCTGTTTGTTTTCGGA
GGGGCTGGAGGCAATGGGGGAAAAAAATGGTCTAGGTTGTAGACTAGATC
GATTGCTCTCGCACGATGAGTGCTGATCGTTGCAGATGTGCATGTAGTCG
TGTTGTTTGTTGCCTTCTCTCCCTCTCTCTCTTGAGAAGGAGAGGAGAGA
AGGCAAAAAGAAACACCATGGCCGAGAACAACGGAAACGTTAAGGTAGAA
GTGGTGGTTGTCTTGTCTTTGCACCCCGAGTACGGTTTTGGTTCACGGCT
AACGCTTTTCCCATTTCGCGAGGTCAGGTCAGGTCAGGTGTTGAGGGGTA
ATAACCTCTTGGCACATGAGAAACCTACCAGCGCGTTTAGTGTTCGGTGG
TGTAGTACTGTAATACTTGCTTCGTCTGTTGCTGGTGCGAAACCCTTACA
ATGGTGAATTATTTTGTATTAACGTGTTTTTCGTACGCCGGATGACGTTC
CCATTCGGGGGGGCGGGGGGGGGGGGGGGGCGTAAGGGCCGAGACTCCGG
AGTGCCCCGTGGGTTGGATTTTACCCCAGGGTCTGTACCCGTTCGAGTAG
TTCGAGCTGCCTGGTACTATCTACCACGCTTAACGGTAACGTGCTTGCTT
GTGGCTGCGCAAAGAGCTGCCTTCGCAGCTTTGCACCGGGTGGGTGTCGT
TGCGACGCGCACGGCGCGCGGTGCTGCTGCACTGTGACGGGTGGCTTGCC
TTTTGCTTGCTATTGTTTTCGTGGCTCCAATTCGAGGAGACCACCGTCCC
TGTCCCAACCCTTTACGTTTCTTAATTAAGTTGCTGTAGCATGTGTGTGT
TCTTCGACGACTTGCAGCAAGAAGAGTCGAGGGTAGAGGGTAGAGGATAT
ACTAATGATACCCTATCGATTTTTGGATATTCGGCCGCTGAGCCTTTTGC
CGTTTGCGGTGAAGACGCAAAGAGAAAAGGCACGCGCAGTTACTGTTA
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protein sequence of Ec-28_000500.3

>Ec-28_000500.3 ID=Ec-28_000500.3|Name=Ec-28_000500.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=114bp
MSADRCRCACSRVVCCLLSLSLLRRRGEKAKRNTMAENNGNVKVEVVVVL
SLHPEYGFGSRLTLFPFREVRSGQVLRGNNLLAHEKPTSAFSVRWCSTVI
LASSVAGAKPLQW*
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mRNA from alignment at chr_28:503644..516088+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-28_000500.3 ID=Ec-28_000500.3|Name=Ec-28_000500.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=12445bp|location=Sequence derived from alignment at chr_28:503644..516088+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
TTTCCGCTACTCAAGCCCGAAGATGATGGGAGGTGAGTGAGGGGGACAAG
CTCTCGCGGGATGTGGCGGTCGGCATTTGGTTGGTAATGGTCGTCTAGAT
AGACCACCACACAGATTTCTTGACCAATCAAGAAATCGGGAGCTTCACGT
ATGTTGTCGGTATGCACGCATACATACGCGATGCTGATCCCGTCGGAGAC
AACGGCGGGCAAAGCCTATCATCTATCGGCCATTGCGCAAGAGGCAATGC
AGCAGGGGTGAACCGGAAACCATCCCGTTTGCATACCTTCTGGTGAGCAC
ACGGAGCAAAAACATGTATAGGTGACACACTGCACCCGCCCGGCTGCTTG
TACACACCAGATTTTGTAAGTTGACACGAAGCCTCTTGCGATCTCTGGTG
GCGGGGAAACTTGGTCAAACAATGGTATCCATACAGTTTAATGTGAAGAA
AAACAACAACAACAACAACAAATACATCCCACACCCCAGGCAGGCAGGGG
GTTATCTCTAGACCCCGCGCTGGAGGCCGCCTATGTAGACCGCGGGGCGG
CCGCCAGAGCTCTAGAGTCGTGAGCGCAGCATCACAGACAGCAGTTAGTT
GCACCTGGGATGCGCTCATCATTTTGCACACAAGCATCAAAGCCAAGCAT
TTTTTGGACGCGAACAAATAAAATGACCGGCGACCCGAGAACATTTTACT
GTACGACAGGGTTCTCTTCTCCCCTCTTCCCAGCTGTCGATCGGATCGCA
ACTTGTTACCCACCCGTTGGCCGATTGAGTGACCTCGGGCCGTGCCGGCA
AACTGCTGCAACTATCAGCCTGTTGCCCCCCTTGGTCGCACACACTCATG
GCGTGAAGTGCGCTCTCACGCTTGAGCGGACGGGAATTGTGTGGGCCTCT
CTCTCCGGAGAGATAAAGTATGCCGAAGGACCTGTCTCAATGTATGTATG
TACATGTATGCGCCTCGATGTACACCTGCTCTAAACCAACTGCCGGAGAG
GCTTCACTGCTTCACTAAGTAATCGCCGTGAAACTATTTGCTGTTCCAGC
CGTCGAGCGGTAGATACGTTGGACAGGTTGCGATCTCGGAAGGCTTCCCC
TCCTTTTGAGCGTGCTCAAGGCGTGCTCGCCAAGAAGTTATTGCATAGAT
AAATAGCCGGGGGGAACTTTGGATGAAAGAACTCTCTGGCGACAGCTGTG
GATCTTTGTGCCATATGTCTTGCGTGCCGAATGTGCAAACAGATGGATGG
GCACATGGGCACATTCGTGACCAGGCCGGACGAACAATCCATCCAGCAAA
GGAACGGTTTCTCGTCACGTGGTTGCCCACTAGTCTAGACTATAGACATT
ATCGTCACCCCTGTTCTTAAATAATACTTCGAACGCACGCATAGATAGGG
CCGCGACAAGGCGAAAGAAGCAGTGCACTCCTCCTCCGGCCTGTTTGCCT
CGCACAACTATGTAGTCTACGCCCGCAAAACTAACGAGAGTGCCAATACT
ACTCTCCGCCACTCGGTCTACGCTTTGGATACATAAATACGAGACATAAT
TCGTTCTCATTTTTATTCCTGTTGGTGTTGTTGGTGTTGATGGTGGTGGT
GTTGTCGCCGCATCCATTGTTTTTGCGCAGGTCCTTGTGTACCCTTCGTT
GCTGTCGCTCCCTCTTGCGCACAATACTTGCGCACAACAACACTACACAC
AGGAAGGGGTTGATACAGGTCTGGATGATGTCGAGTACATGTCATGTATC
GGCCTGCTGTTGTTTATTTTTTGCTCCAGAACATCAACATCGGGGTATCT
GTAGTTGGCCCGACCGGGGTTGATCCGTATCCATCCGTCGTGTGGTGATC
CACTCACAATAATGACTGTAGGTTTTGTGTGTCTATCGTATCCGAATACT
GACTGACTGGTTTGGCTTTACTGGCGGCGAGGGATGGTTGTACATTTATC
ACGAGAAATTAGAGAAATTAACTCATCAAAGTGTACCGCGACAGGAAAAG
AAAGAAACAAGAAAATAATTTCCCTCCCTCCAGGTGCCCATCTTCCTTCC
TGCGTCACCCCGGCTGGTGTCTGAAAATAATAAATAAGTAAATAATACCG
GATCCCGCGCAACAAAATATATCTACGCCAGCAGCCGGACTAACGGGACG
ACAGAAACACCACCTTGTTTGATTCTGTCCTCGTCCAACACCCGATTTTT
CGTATTGGATGATGATGGCTTTGCCAACAACCCATTCAAGAGTAACGGAG
TCCACGAAGAAGACAGGCTGACATCTCTTATTATTCCATTTGGAAACAAT
GGGCTGGACGTCGTCGAGGTCTCGCCTGAATCCGGGGGTGTTCGCGAATG
TTGCTGGTGGCAACCTCACCAGAATTTTCTCGCCGGGGGGGTCGGGCGCG
TGCGGCACGTTGCCCTGCTGAAACGCAATGAATGTTCTCCAGGGCAGCGC
AATCAATTAGCAGAGAGAATAGGGCAGCCGACCGAACAGAAGCAACAGTA
GTTCTGTGGCCGCGCCAAGAGATGATGGTTATTTACTTGCTAAATCGATC
CTCGATTCAAATGTCAGTATATTTCACGGTAGCAACCTCCCACCAACGGG
TGATTTCGGGCTTTTAGCCTTCGATTCACCCGTGAATTTGTTTTATATTG
TGCGTCGTGGTGCCCACAATCGGGCTTATGGCACAGGGATGCGCAATAAA
TGCAAGAGAGAACAGCACGGGTTGTTATTTGTTGCATTTCCGCACCGGCC
GGTGTCCTGGGTATTACCGCACGCACCCTGTGCCATATCAACGATAGTCT
ATATAACCTGTGTAGGATGTCAAGTTTCATACTCCCCAAAGGTACCCGTA
TAGACTACCCTCCGGGCCACGTATTGAACTGTAGACTATGTCCCGAACGG
CTGGGAGATAACAATTGAGGCGCAATCCTTCCATGTTTAGACATGGTGCC
GTCGAGGTACGCGTAGAAATGAATCATCAATCGATGATTTTTTATAGAAC
GATCGCAACCAACCCCGTGCTACAACATTGTCACACGCACAAACAACCGC
TGTATGCGATGTATCGTATTCAACCTTTCACTCGCTCGCGTCGTTCGGTG
ATACTCCGAAGGTTTTTCCCTCCATCGCGGCTGACTGTGAGATAGATGCG
ACTCCCGTTGGGGCTGCTTTGGTACAGACACCACAAACAACAATGATGTG
ACGCGATACGGTTATCTCCTCGCAAACAGAATAATAGTCTACAGCAGTCA
ACAAATTTCTTGATCGCTCTTCTGCTGTTCGTTGCTGTTTGTCTCAGCAG
GGACTACGCTGTTTGCGGTGGCGGCGGCGGGCCTCCTGAATGTCGCCGTC
TCGCAAGAGTTCCCCGCGATGGAGTTCGTGATCCCACTGTACATCGCTCC
GATGTTCGACAATGGCACCACCGGTGAGTGCCCGATATGCCTCTAAGGGT
AAGAATGATTTTTTTGCCGTGCGACTTTTCGACGTCAATCTCTTGGTTCG
CCAGCGAGCAGCGCTCCTTGCAAGCATTAGTAGGAAGAAGTGCATCACGT
TGTCGTACCACCTGAGGAATGTTGTCGCCGGTGGTAACGCCCACATCATC
AGTCGAGAATCAAGGTGGACGTTGTTGGTTGCAGGAGCCACCAAGCAAGG
CCCCTCCCCGCTCTCCCCCTCCCTCCGTCTGTACCTTGAAACGATCGACA
AAGAATAATAATGTCCTCCGCGTTTAATTTTTTTACAACACTAATTCTTG
AAGGACTTTTTTGACCGTTCAAGATAATAACTGAAATATCGAAGGCAGTC
AATGTATGTCTTCGCAGTGAGAGGGGGAGAAACAAACCTGCCACAGAAAA
AGCTGCCGCACTTGAGAACTTGGCAGTTGAGAAAATGAAGAACCCCAGCG
TCTGCCAAAACTAGAGGTTCCTACGCTAAGTGCGGGCGTTTCTCCGTTTT
TCCTATGCTAAGTGCGGGCGTTTCTCCGTTTTTCATATGCTAAGTTCGGG
CGAGTTCTCCGTTTTTCATCAACTCTTCTTGCTTTCCGTCTTTCTTTCTC
TTCTCAATCAACAATCTGTTCGGTCGGTTCAGTCACGATCGACCCGCAGT
GGACGGCGCTTGCCGAGACCGCGGCGACGGGTGCGACCGTGTTCGGGATC
CTCAACCCGGCGAGCGGGCCGGGTGAGGTCACCGACGCCAGCTACCCGGA
CGTGATCGATTACGTCAAGGGAGCGGGAGCCAAGGTGATGATGGAGACAT
GATGTGATGACCTGCAAGTTACGGTAGTTCGTGGTGTGGTTGTGATGATG
CAGTTGTGATGACCTGAAAAAACGTGACAGCAAGTAAGTCAGTGCTTGGT
GTGTTTCTTTGTTCGGAATATGATGACGTAAAATGACAAAAATTTGGACG
ATATTGTGTGAAGCGGCATACGGAAGAAGGCGCGGGGTCACGCGAAGGTT
TCGGTTGCTGTGTACGTCGATGGAATACGTTTCGATTTTCGATATATATC
AACCACCGTGCTCTCAGACGCAATAGGCAGAACGCAGACGAGTTGGGCTG
GGCCCCTCTTGTCGCTGTCGGGTGTGCCAGCATGACGTGTCTTCGTGCCA
ACGATACTTGGAGAGAACGAGGGGGGGGGGGGTNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGCCAGGCATCCTTGG
AGTGAACGAGGGGGGGGGGGGTTGGTCGGATAGAGTGCCACCCACCCCCG
CATAGCCCACATGAACGGTAAATCGACAGCGTGAAGCTCATGTTGGTGCA
TCGGGCTACTTAGCTGTGGCTGGCGGTAGGGCATGGTTTACTTTATACAC
CAAACACCCTGCCGGGCCCTTCGCTTGAACGCGTGCTGCGCATGGAGACG
AACCGGCCGGTCTCGCGGGGCGTCTTGGCAAGAAACACGGCATGACTCAG
TTTTTGATTGAGTCACCCACGAGTGTTCCGCCACCCCTGACCCCACCCCG
CTTCTTGTACTGTTGCAACCACAACAACCTCGTGTGTAATAGATGCTGTG
CTACGTGGCGACGACGTACGGCAACAAGACCACTGGCTCTGTGGAGGAGG
AGATCACGGCCTACCAAAGCGTGAGAGAGGGACCCCGGGGGCTGGTCGTC
GTCGTTACACGTTCGGTCGCCGTTGAATCGAATCTTTTGTCGGTTGTTGC
TCGCTCTGCACGGGATGAGAAATTAGTCTTGAGCTACCAAAGAGTACCGT
TGATGGTATCGTGAAGGAATTCTTGTCGATTTTGAGAGTGGGCCTAATTA
CCCCGCTGCCCTGTGGGGCGCCGAGCTTCTGCCTGACTGAAAAGGTATTT
CCTCTAGCGTCCGTAGAGCATGCATTCCCCCGTCTCTCGCCGCGTGGGTG
CACGGCCCTCCCGGACCGCCTTCGCAAGAAATTCAGGTTGGGGGTACGCA
GACCCTATCCCTAGCCCTTACCCCAACTTCCTCGATTGCATACTACATCC
AACATGTTTACGTAATCGAATCCCTGGAAAAGGCTACGGCCCGTCCCTAA
CTCCCCGACAACCTCTGCTGTGATCGTTTTATTCGTTCGTGCCCTCGCGC
CGTATGCCCCCCCCCCCCCTCCTTCGTTCCAAAGCTGCTATTATAACTTT
ACCCCGGGGCCTGCGACGGCATCTTCTTCCACGAAGCCCCCCACCTGCTC
ACCGATGCGGGCAACCTCCAGATCTACACGGGCCACAANNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NCCGCAAAGAGAAAGAAAAAGAAAAGGTACCTTGAGGTAGCCCACCCGCC
CACCGCCCCAGGTACCCCCTTGAAAGGGGGGGTCACGATTGTTTTTTTGC
CATTTTTTGTCGCGAAACGCAGAGCATTACTGCACGCCTTCCTATTAGAC
CATCGGCCGAAAGGCGGGGGGGGGGGGAAATACTCGTGTTTCGCAGGCCT
TCGGGTAGGACGGGATTCCGGAGGCACGCTCCTCGAGAGGCCGGCCTGGC
TGGTGGTATTAAACCGGGTAGTTCCGTCTGTTTCTTCGCCGAGTTCTTAA
CCCCCCGCCCACCCCCCACCCCCCATCTCTCTCCCGCGGTGCCTTGCACC
TTGCAGGAAGCTCGCGTCGTCTTCAACACCGGCCAGGCGGCAGACGAGCA
GTACTTTTCCTTCTCGCCCCCGGCTGAGGTCCTGGGTTACGAGAACTACT
TCAAGGCGTGAGTTCGCGGGGTCCATTCCCACGCTTTCACCGGGGGGGAG
GGGAGGGGGGGGGGGGCGACTACTACCGTCGTCGTTCGTTTTCGCTTGCC
CACTGGGCGTTTGTTGCGGCCCGTCTCTTGCTTCTTGTTGCCGTGGTTTG
TTTTGTTTTATCTGGCGATGTGCGGTGCTGTACGGTAGCTGCTAGAAGCG
CGTCTACTTGCGGCAGGCTGCTCTACGAGCCCCTCACTTGCGCCTTTGTG
TTGGCAAAAAATTGTTTTTTTTCATACCAGCTCGTGCGCCGTGTTTCGAA
AACTCTGACCGTGCATGGTCGTGTTGGGTGTATTTTTTTTTTGCAGCGTG
AGGCAGCTCGGAGTGCCGGAAACCAGCGACATTTCCACGCCGCCCCAAAA
CATGCTTCTCCTGCACAGCGCCACCGAGCTGGCCGAGAAGCCTGAGGTAC
GTCTGCATATCACACCCATCTAAAGGTCGTTGTAAATACGTTTGTTTCCT
TCCCATTCTCTTCGTGTCTCATCACATCTGGTAAGTGTACGGCAACGTGT
ATGCGTTTCCTGCCTCCTCTCTTTTGGTGTCCCATCACAACCTCCCCGCG
CTTTCCCGTCGCCACCACCTCCTTGCTCGTTCTCTCTCCGGCCGTCAAAC
CACGACAGCTGATCCAACCCTTCGTGGACAAGGCCTACTGCAAGGGCTGG
GGCACGGTGTACGTGACTGACGACCTCTTCGACGAGGTGCGTTTTGTTTT
TTTGTATACTTGGTAGTCTTTGCTGTTCTTTTGTCGACGCCTGTTGTACT
CGTCGACGCCGCCATCGTCTTCGTCGTCGCTGTATTAGTCACGGTTCTTA
CCGTTGTCGTTATCGTTCCTCTCGTCGGCCGTGTACGCAAGGGTGTCTGT
AGTCCCCAGCCCTTGCATCAAAACCCGCCGCCCGTCCGTCTGTCCCGTGA
GATTGTCCGACTCCCGGCCTCGTGTCGTCTCCTTTGGCTGTCTTTGCCGG
CTGCCCAGGGTGTTTGTCCCCAGCCCAACTTTACAACCCGGACGACTGAC
CCGCTACAATGAAATAACTTTTCGATTTTCCGTGCCGTGTAACTCCTCTC
CTCTACAGGGCAACCCTTGGGACAACCCGCCGACCTTCTGGACAGCCTTT
ATCGAAGCCTCGAGGAACATCCCCACCGTGGAGTCCTGCGGCGACGGCGG
CCTCAAGATCATCGCCCCCCTCCTTGGCAACGACGACGCCGGTGAGTGGT
AACACGGCAACTTACCTGTAAACGTTTTTTTGCTCTCATTTGTTTCAAGA
AAATGTCGGGGGGAAATATCAGAGCATCCAAAGCCGCCGGTGAGTGATAC
CACGCCAAGTTACCTTGGGACTTCGCTCGGCGAAGCTTATAAAGAGTTTG
TCTTCCGTTTGTTTGTTTGTTTTCGCCCCGCGAAGACTGCCGTATTGTTC
GCAAAAGAAGATAAAAACTTTAGAATTATCACCGGTAGGTCTCTTCGTAC
CGCCGTCGATGATACCATATCATTGAAAGACACGGCGTATACACACCCGA
GGTCCTTTTCATTTCTGCTTCTCGTGTGTTTTGTGGTAAAAGGGGTGTTT
TTATTGTACCGTGTTCGGGGCGCAGGCCAACGTATTTAGGTGCGCAAATT
CTCCACATCCACACGCGATTTCTGCCGGCGAAAACCAACGTCGCTCTCGT
CCCCCTGTCGTGTGCTGCTCCCATTTTTTTTGTGTTCTCTCTTTTTGGCA
GACACGGAGGCCATCATGGCGACCGCTGACCCGGGGGACTACGGCGACAG
GATCATGGTCGCTATGAACGTCGAGATCACCGAGACCGGCGAGTCTACCG
ACAGGGCTGCCGCGGTCAGGGACGCCGGGGCGAAGGTACAGAGCATACTT
CCGTGTATGGGCACATACAGACTCAAGTAGAGGCCAGCATCCAGGCGGTT
TTGCCCCCCACTCAAATGCAAGGACATGATCCCCTGCGGCTGCGGTATTA
TTTCCTTGAACGGGGAGTCGTTCCGTGGCGTTGGTACAGTGTATCCCGGA
CTCTCATTCGTGGGTAGAGATGAATATGTTGTGAGGTTTTCGTACTTCCA
TGATATGATATCTATAGTAGGGTGTGTGTGTCGTCGACTCGAACGGAACG
CACACCGAGAAAACCCCTCTGGGGCCGGCCGTATCGCCCTCATGCTGTCC
GTCGCCGCCCTCCCCTGTTGCTCGCGCTGTTGTTGTCTGTACGCTCTTCT
TCCCCTTAAGGTGCTCTGCTACATCGAGGCCGACAAGTACGGCAACGACC
TGGCCACCCTCGAGGAGGTCGTGGAGACGTATACCTTCTTCCCCCTCAAC
GAGATCTGCGGCGGGTTTTTCTTCGGGGCCTTCAACATCCTTCTGGCCAT
CGAGGACATGCCCGGCATGCAGTCCCTCTACCTCAAGACCCAGGTGCACG
GGCGTTGTGGGAGGGGGGGCGGGCGGGGGGGGGGGGACATGCAAACGGAC
GTATTATGCGGGGGGAAAGCGGACAATCATGTAGCGTAACCTAGGAGCGT
GTAGGGTTAACCCTAAGGAAAATGACCTATGTAGGCTTCGCATCACGCTC
AGCTGTATTCATAACCACCCCCCCTTACGATCCGTCTCTCCGGTGTTCGC
AACACGGCCATATTCTCGGAGCAGAAAACCTTCCTCCAGCCGACCGTGGT
GTTCGCACCCGAGGTCCAGGACTACTCGGACGGCTTCGAGTCGAGCTACA
GCTTCAGCTACGACTTCGTGGAAGGTGTGAGCGCTTCGGCAATCTTGCTT
TTTGACTCTCTGCGTTCCCGAAGAGCGCCTGGCGGACGATGAGTTGAGGC
GCGCGCCCCCCTTTTCCAGTGACATGCGATAGGATGCTAGCGCTTTCCTG
CCGAGGGCTTGATGTACCCCAATGACACACGCGCAAATCGTTTCTGCGTG
GTGCGCCGCTTTTTTGTATTTCGGGGGTCCGCGCTCTCGTGTTCTGTTGT
CCGTTTTGTTTTTCTGCCACCCATCATCGTGGATCGGTCTGTACAAATCA
GTGCGATCGATGCGAAAGTCTAACCTAACCTCTGTCCTTTCTTGTTTTCC
GCGCGCCCTGCCGCAACCAACCCTGTCCGGGACCGGCTGCCGCCTTTTTC
TCTGTTCTGCTCGCGGTTCGAGTCGATGAAGATGACTGGTACAGCACGAA
CAACTGGGACAGCACCACCAACTTCGAGCTCCCGTGGGAAGACGTTATGA
CCGAGGTGAGGGAGATAGTTCGGCGGCCTGTATTTTTCCCCACGTAATTG
TTTTTTTCCAGAAAGAGTTGAGAGCATTTTTTTCAACCCAATTTTGTGTG
TCGCGACGTACTACATTCGACACAAAACCAAACTTTGCCACCACCACACG
AACGTCCGCAGGAAACCTCGTTACTCCGACGGCATCGCCTTCTTACCTGT
TGTTCAACTCCTCAAAACGGTACCAAATGTCTCACGTTCGAATTTCATCA
CCTCTACATGAAGAGACCCCCAGACACTTACGCTCACGCCCCCCCCCCTC
CTTTCTCGACGAAAAAAACTTCATCGGGCCCGCAAGACTGACCTCGTTGC
GCTGGCGGAGTCCCTCACCGTGGGGCTGGGTGACGGCGCCACGGCCGGCG
AGATCGTGGTCGCGGAGGCCATAGACGGCGGCTCGGTCATCCCCGAGGCC
CCCGAGCCCAACGAGAGCACCGCTGCCCTCGTCACCGGCTACGCCGGGGC
CCCGGAGGTGGGAAGGAACTAGGAGAAATTTTGGCGCTCGCGACGACGAT
GTTTTTGACGGCCTTTGCTGTGCTTTTGCGTTGCTTTGTCATGCTTGATC
TTTGATCTATATATGTTTTTTATGCCTTTGTCCGACACTTGCTTGCGATT
ACGATAGTATGTGATTCCTCTCGGCTGCTGCGAAGCTATTTGGTTTCGTT
CTCCGACAAGTGGCGCCTCTTTGGGCGTACGAAGAACGAGATAATAGAAA
ACAACGTCCCTCCCCCGAAAGTGTCACGACGCCCGGGGCGCTTGCCTCCA
AGCTCAAACTATTGAACACCCCCCTTTTCCTTCCCTCACCCCCCCCCCCC
CCCCCCCCCCCCCCCCTCTGCCTGACGCCATTGTTTTTTTCATGCGACCC
CACCCCCCCCCCCCGGAGGGAGGTGTTTCCTTTTTTTATCAAAAAAAGGC
CCCCCGTGGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNGATCGTCTAAAGTTGGAACTACCTACAAACTCGCCCGATCCGA
TCGCATGGACTTAAGAATGGCGACAGGGAGAGAGAGAGACGGCCGGCCGG
CCGCCGGCCGTCAGAGCGTTGGCTACCGGAATTCAAACCGCACGACACTC
GTTAAGGTTAAGGAGAGCGTGTGACTGCTACGACCCGAATACAAGCCACA
CGAAACTTGGGGAAGGAATCGAGTGTTTCGAGTGTTTGGTTTGCCCTTTC
CTTTCCCTCTGCCAGATAGAAGCGTCGTCCCCTTAATACGCGTTTTGTTC
GGTGTTGTTTTTGTTTTTTTTATGTTCGGAACTTCAAATCCGTGACGAGG
CACAAAATTCAGTGGTGTAGAAATCCTCGCGTTGTGTGTGCGTGTGCGTG
TTTTTTTTAGGGGGGTCATTCGCTTGTTTCCTGGATTTGCTGGGAGTCCT
AATCCGTGTAAGGGTGGTGGCGGCGGGGCACGCGGTTGGATAGATGGGCA
GACTCACTTTTGCGTACGCACCACGACCCATTTTGTCCGTGTCCTGCCCG
GTGCGCGCGAAATTATCTTGAGCCTGTCCTTCGATGGTTTCTTGAAACAT
TTTTGTCCATCGATGACTTCTTCTTGTGTGTGAGTGGCGTTGTTGTGCAT
GCGGTACACAGATGCACCACAAAAACTAGCGTCTGTTTGTTTTCGGAGGG
GCTGGAGGCAATGGGGGAAAAAAATGGTCTAGGTTGTAGACTAGATCGAT
TGCTCTCGCACGATGAGTGCTGATCGTTGCAGATGTGCATGTAGTCGTGT
TGTTTGTTGCCTTCTCTCCCTCTCTCTCTTGAGAAGGAGAGGAGAGAAGG
CAAAAAGAAACACCATGGCCGAGAACAACGGAAACGTTAAGGTAGAAGTG
GTGGTTGTCTTGTCTTTGCACCCCGAGTACGGTTTTGGTTCACGGCTAAC
GCTTTTCCCATTTCGCGAGGTCAGGTCAGGTCAGGTGTTGAGGGGTAATA
ACCTCTTGGCACATGAGAAACCTACCAGCGCGTTTAGTGTTCGGTGGTGT
AGTACTGTAATACTTGCTTCGTCTGTTGCTGGTGCGAAACCCTTACAATG
GTGAATTATTTTGTATTAACGTGTTTTTCGTACGCCGGATGACGTTCCCA
TTCGGGGGGGCGGGGGGGGGGGGGGGGCGTAAGGGCCGAGACTCCGGAGT
GCCCCGTGGGTTGGATTTTACCCCAGGGTCTGTACCCGTTCGAGTAGTTC
GAGCTGCCTGGTACTATCTACCACGCTTAACGGTAACGTGCTTGCTTGTG
GCTGCGCAAAGAGCTGCCTTCGCAGCTTTGCACCGGGTGGGTGTCGTTGC
GACGCGCACGGCGCGCGGTGCTGCTGCACTGTGACGGGTGGCTTGCCTTT
TGCTTGCTATTGTTTTCGTGGCTCCAATTCGAGGAGACCACCGTCCCTGT
CCCAACCCTTTACGTTTCTTAATTAAGTTGCTGTAGCATGTGTGTGTTCT
TCGACGACTTGCAGCAAGAAGAGTCGAGGGTAGAGGGTAGAGGATATACT
AATGATACCCTATCGATTTTTGGATATTCGGCCGCTGAGCCTTTTGCCGT
TTGCGGTGAAGACGCAAAGAGAAAAGGCACGCGCAGTTACTGTTA
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Coding sequence (CDS) from alignment at chr_28:503644..516088+

>Ec-28_000500.3 ID=Ec-28_000500.3|Name=Ec-28_000500.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=342bp|location=Sequence derived from alignment at chr_28:503644..516088+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGAGTGCTGATCGTTGCAGATGTGCATGTAGTCGTGTTGTTTGTTGCCT
TCTCTCCCTCTCTCTCTTGAGAAGGAGAGGAGAGAAGGCAAAAAGAAACA
CCATGGCCGAGAACAACGGAAACGTTAAGGTAGAAGTGGTGGTTGTCTTG
TCTTTGCACCCCGAGTACGGTTTTGGTTCACGGCTAACGCTTTTCCCATT
TCGCGAGGTCAGGTCAGGTCAGGTGTTGAGGGGTAATAACCTCTTGGCAC
ATGAGAAACCTACCAGCGCGTTTAGTGTTCGGTGGTGTAGTACTGTAATA
CTTGCTTCGTCTGTTGCTGGTGCGAAACCCTTACAATGGTGA
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Synonyms
The feature 'Ec-28_000500.3' has the following synonyms
Synonym
Esi0098_0003
Esi_0098_0003