Ec-28_000500.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-28_000500.1
Unique Name	Ec-28_000500.1
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	512

Homology

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BLAST of Ec-28_000500.1 vs. uniprot
Match: D7G9D4_ECTSI (Spherulin 4 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9D4_ECTSI)

HSP 1 Score: 1016 bits (2626), Expect = 0.000e+0
Identity = 511/511 (100.00%), Postives = 511/511 (100.00%), Query Frame = 1

Query:    1 MMGGTTLFAVAAAGLLNVAVSQEFPAMEFVIPLYIAPMFDNGTTVTIDPQWTALAETAATGATVFGILNPASGPGEVTDASYPDVIDYVKGAGAKMLCYVATTYGNKTTGSVEEEITAYQSEARVVFNTGQAADEQYFSFSPPAEVLGYENYFKAVRQLGVPETSDISTPPQNMLLLHSATELAEKPELIQPFVDKAYCKGWGTVYVTDDLFDEGNPWDNPPTFWTAFIEASRNIPTVESCGDGGLKIIAPLLGNDDADTEAIMATADPGDYGDRIMVAMNVEITETGESTDRAAAVRDAGAKVLCYIEADKYGNDLATLEEVVETYTFFPLNEICGGFFFGAFNILLAIEDMPGMQSLYLKTQKTFLQPTVVFAPEVQDYSDGFESSYSFSYDFVEVDEDDWYSTNNWDSTTNFELPWEDVMTETDLVALAESLTVGLGDGATAGEIVVAEAIDGGSVIPEAPEPNESTAALVTGYAGAPENGDRERERRPAGRRPSERWLPEFKPHDTR 1533
            MMGGTTLFAVAAAGLLNVAVSQEFPAMEFVIPLYIAPMFDNGTTVTIDPQWTALAETAATGATVFGILNPASGPGEVTDASYPDVIDYVKGAGAKMLCYVATTYGNKTTGSVEEEITAYQSEARVVFNTGQAADEQYFSFSPPAEVLGYENYFKAVRQLGVPETSDISTPPQNMLLLHSATELAEKPELIQPFVDKAYCKGWGTVYVTDDLFDEGNPWDNPPTFWTAFIEASRNIPTVESCGDGGLKIIAPLLGNDDADTEAIMATADPGDYGDRIMVAMNVEITETGESTDRAAAVRDAGAKVLCYIEADKYGNDLATLEEVVETYTFFPLNEICGGFFFGAFNILLAIEDMPGMQSLYLKTQKTFLQPTVVFAPEVQDYSDGFESSYSFSYDFVEVDEDDWYSTNNWDSTTNFELPWEDVMTETDLVALAESLTVGLGDGATAGEIVVAEAIDGGSVIPEAPEPNESTAALVTGYAGAPENGDRERERRPAGRRPSERWLPEFKPHDTR
Sbjct:    1 MMGGTTLFAVAAAGLLNVAVSQEFPAMEFVIPLYIAPMFDNGTTVTIDPQWTALAETAATGATVFGILNPASGPGEVTDASYPDVIDYVKGAGAKMLCYVATTYGNKTTGSVEEEITAYQSEARVVFNTGQAADEQYFSFSPPAEVLGYENYFKAVRQLGVPETSDISTPPQNMLLLHSATELAEKPELIQPFVDKAYCKGWGTVYVTDDLFDEGNPWDNPPTFWTAFIEASRNIPTVESCGDGGLKIIAPLLGNDDADTEAIMATADPGDYGDRIMVAMNVEITETGESTDRAAAVRDAGAKVLCYIEADKYGNDLATLEEVVETYTFFPLNEICGGFFFGAFNILLAIEDMPGMQSLYLKTQKTFLQPTVVFAPEVQDYSDGFESSYSFSYDFVEVDEDDWYSTNNWDSTTNFELPWEDVMTETDLVALAESLTVGLGDGATAGEIVVAEAIDGGSVIPEAPEPNESTAALVTGYAGAPENGDRERERRPAGRRPSERWLPEFKPHDTR 511

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BLAST of Ec-28_000500.1 vs. uniprot
Match: D8LFB3_ECTSI (Mannuronan C-5 epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFB3_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 4.250e-19
Identity = 77/279 (27.60%), Postives = 128/279 (45.88%), Query Frame = 1

Query:  373 VVFNTGQAADEQYFSFSPPAEVLGYENYFKAVRQLGVPET-SDISTPPQNMLLLHSAT-----ELAEKPELIQPFVDKAYCKGWGTVYVTDDLFDEG-----NPWDNPPTFWTAFIEASRNIPTVE--SCGDGGLKIIAP--LLGN--DDADTEAIMATADPGDYGDRIMVAMNVEITETGESTDRAAA-VRDAGAKVLCYIEADKYGNDLATLEEVVETYTFFPL-NEICGGFFFGAFN-ILLAIEDMPGMQSLYLKTQKTFLQPTVVFAPEVQDYSD 1149
            V FN G   D  YF+FS    V+ YEN+++ ++ +G+P T S +  P Q+ L +H+ +        E   L++  V +A C GWG +Y+T D  D G     NPW+    +W   +EA +  PT+   SC    + ++ P  L G   +DA  + +            + V ++      G+ T+  A  +RDAGA+VLCY + + Y +    + E+           E+CGG +   ++   L+ E    +  LY+  Q    +  +V      DY D
Sbjct:  179 VTFNPGGGVDPAYFAFSGNPTVMSYENFYRVMKNVGMPRTPSSVLDPSQHALAVHTTSPDLDGNTEETRALVEAIVQEAACSGWGKIYLTSDSQDPGSDDGGNPWNVLTNYWDTLVEAVKAYPTLPPPSCSGPEMALMVPVWLAGEALEDAVDDVLGVVTKSNFLEGGVTVVLDAR---DGDGTNPTATQLRDAGARVLCYFDFNSYTDVYDLIGELTSADPPAAFATEVCGGLYVDNYSEFTLSAEQ--NIYDLYITVQNVIPRGMLVI-----DYED 447

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BLAST of Ec-28_000500.1 vs. uniprot
Match: A0A517XLQ9_9BACT (Spherulation-specific family 4 n=1 Tax=Urbifossiella limnaea TaxID=2528023 RepID=A0A517XLQ9_9BACT)

HSP 1 Score: 74.3 bits (181), Expect = 8.390e-11
Identity = 63/221 (28.51%), Postives = 92/221 (41.63%), Query Frame = 1

Query:  142 DPQWTALAETAATGATVFGILNPASGPGEVTDASYPDVIDYVKGAGAKMLCYVATTYGNKTTGSV-------------------------EEEITAY----------QSEARVVFNTGQAADEQYFSFSPPAEVLGYENYFKAVRQLGVPETSDISTPPQNMLLLHSATELAEKPELIQPFVDKAYCKG--WGTVYVTDDLFDEGNPWDNPPTFWTAFIEA 693
            D +W  LA+ A  G  +  I+NPASGPG+VTD +Y  VID V+ AG   + YV+T+Y  +    V                           E+ AY            +  ++ N G   D  YF    P  V  +EN   + R+   P  +    P +   L+H+       P+   P  + A  +G  +G V+VTD      NPWD  PT+W   + A
Sbjct:   41 DARWQQLADAAKNGVPLTVIVNPASGPGKVTDPNYTAVIDGVQKAGVTTVGYVSTSYARRPAADVLADVKTWLKLYPTTQGIFLDEQPSGAAEVAAYLELCESIRRLNPKLTILSNPGTVCDAGYFGTGGPDVVCVHENE-GSFRKYARPAKA--YPPGRTAGLVHTT------PQGANPAAEVALARGHGFGMVFVTDARMP--NPWDRLPTYWDDLLTA 250

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BLAST of Ec-28_000500.1 vs. uniprot
Match: A0A1I2K2G6_9ACTN (Spherulation-specific family 4 n=9 Tax=Streptomyces TaxID=1883 RepID=A0A1I2K2G6_9ACTN)

HSP 1 Score: 58.2 bits (139), Expect = 1.980e-5
Identity = 53/184 (28.80%), Postives = 81/184 (44.02%), Query Frame = 1

Query:   79 MEFVIPLYIAPMFDNGTTVTIDPQWTALAETAATGATVFGILNPASGPGEVTDASYPDVIDYVKGAGAKMLCYVATTYGNKTTGSVEEEITAYQSEARVVFNTGQAADEQYFS--FSPPAEVLGYENYFKAVRQLGVPETSDISTPPQNMLLLHSATELAEKPELIQPFVDKAYCKGWGTVYVT 624
            M  +IPLY+ P  D G        W  L   AA   T   ++NPA+GPG   D ++      ++ AGA++L YV T YG ++T  V E++  ++            AD  +     S PAE+       ++VR+LG   T+ +  P      +H A   A   +L   F      +G  T YV+
Sbjct:    1 MSLLIPLYVHPAEDPG-------AWHQLVTAAAR--TYAVVINPANGPGPSPDPAFTAAAGALRAAGARLLGYVDTDYGARSTAEVAEDVVRHRE--------WYGADGCFLDRVTSDPAELRACRRLVRSVRRLGA--TTVVLNPG-----VHPAPGYARVADLTVTF------EGHWTTYVS 154

The following BLAST results are available for this feature:

BLAST of Ec-28_000500.1 vs. uniprot

BLAST of Ec-28_000500.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
D7G9D4_ECTSI	0.000e+0	100.00	Spherulin 4 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7...	[more]
D8LFB3_ECTSI	4.250e-19	27.60	Mannuronan C-5 epimerase n=1 Tax=Ectocarpus silicu...	[more]
A0A517XLQ9_9BACT	8.390e-11	28.51	Spherulation-specific family 4 n=1 Tax=Urbifossiel...	[more]
A0A1I2K2G6_9ACTN	1.980e-5	28.80	Spherulation-specific family 4 n=9 Tax=Streptomyce...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_28	contig	chr_28:503666..516092 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Taxonomic scope	Bacteria
Seed ortholog score	84.3
Seed ortholog evalue	1.8e-13
Seed eggNOG ortholog	1000565.METUNv1_03506
Length	3030
Hectar predicted targeting category	signal peptide
Gene id	Ec-28_000500.1
EggNOG free text desc.	Spherulation-specific family 4
EggNOG OGs	1N0H6@1224,2VV7F@28216,COG1122@1,COG1122@2
COG Functional cat.	P
Best tax level	Betaproteobacteria
Best eggNOG OG	NA\|NA\|NA

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-28_000500	Ec-28_000500	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_28 503465..516092 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-28_000500.1	Ec-28_000500.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_28 503666..514598 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-28_000500.1.1	Ec-28_000500.1.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 503666..503675 +
Ec-28_000500.1.2	Ec-28_000500.1.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 506944..507066 +
Ec-28_000500.1.3	Ec-28_000500.1.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 507726..507877 +
Ec-28_000500.1.4	Ec-28_000500.1.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 508736..508813 +
Ec-28_000500.1.5	Ec-28_000500.1.5	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 510100..510200 +
Ec-28_000500.1.6	Ec-28_000500.1.6	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 510540..510639 +
Ec-28_000500.1.7	Ec-28_000500.1.7	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 510852..510929 +
Ec-28_000500.1.8	Ec-28_000500.1.8	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 511302..511434 +
Ec-28_000500.1.9	Ec-28_000500.1.9	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 511945..512078 +
Ec-28_000500.1.10	Ec-28_000500.1.10	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 512454..512636 +
Ec-28_000500.1.11	Ec-28_000500.1.11	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 512868..512967 +
Ec-28_000500.1.12	Ec-28_000500.1.12	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 513366..513448 +
Ec-28_000500.1.13	Ec-28_000500.1.13	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 513780..513950 +
Ec-28_000500.1.14	Ec-28_000500.1.14	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 514509..516092 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-28_000500.1	CDS:Ec-28_000500.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_28 503666..503675 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-28_000500	3UTR:Ec-28_000500.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	three_prime_UTR	chr_28 514599..516092 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_28:503666..516092+
coding sequence from alignment at chr_28:503666..516092+

mRNA sequence

>Ec-28_000500.1 ID=Ec-28_000500.1|Name=Ec-28_000500.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=512bp
MMGGTTLFAVAAAGLLNVAVSQEFPAMEFVIPLYIAPMFDNGTTVTIDPQ
WTALAETAATGATVFGILNPASGPGEVTDASYPDVIDYVKGAGAKMLCYV
ATTYGNKTTGSVEEEITAYQSEARVVFNTGQAADEQYFSFSPPAEVLGYE
NYFKAVRQLGVPETSDISTPPQNMLLLHSATELAEKPELIQPFVDKAYCK
GWGTVYVTDDLFDEGNPWDNPPTFWTAFIEASRNIPTVESCGDGGLKIIA
PLLGNDDADTEAIMATADPGDYGDRIMVAMNVEITETGESTDRAAAVRDA
GAKVLCYIEADKYGNDLATLEEVVETYTFFPLNEICGGFFFGAFNILLAI
EDMPGMQSLYLKTQKTFLQPTVVFAPEVQDYSDGFESSYSFSYDFVEVDE
DDWYSTNNWDSTTNFELPWEDVMTETDLVALAESLTVGLGDGATAGEIVV
AEAIDGGSVIPEAPEPNESTAALVTGYAGAPENGDRERERRPAGRRPSER
WLPEFKPHDTR*

spliced messenger RNA

>Ec-28_000500.1 ID=Ec-28_000500.1|Name=Ec-28_000500.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3030bp|location=Sequence derived from alignment at chr_28:503666..516092+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGATGGGAGGGACTACGCTGTTTGCGGTGGCGGCGGCGGGCCTCCTGAA
TGTCGCCGTCTCGCAAGAGTTCCCCGCGATGGAGTTCGTGATCCCACTGT
ACATCGCTCCGATGTTCGACAATGGCACCACCGTCACGATCGACCCGCAG
TGGACGGCGCTTGCCGAGACCGCGGCGACGGGTGCGACCGTGTTCGGGAT
CCTCAACCCGGCGAGCGGGCCGGGTGAGGTCACCGACGCCAGCTACCCGG
ACGTGATCGATTACGTCAAGGGAGCGGGAGCCAAGATGCTGTGCTACGTG
GCGACGACGTACGGCAACAAGACCACTGGCTCTGTGGAGGAGGAGATCAC
GGCCTACCAAAGCGAAGCTCGCGTCGTCTTCAACACCGGCCAGGCGGCAG
ACGAGCAGTACTTTTCCTTCTCGCCCCCGGCTGAGGTCCTGGGTTACGAG
AACTACTTCAAGGCCGTGAGGCAGCTCGGAGTGCCGGAAACCAGCGACAT
TTCCACGCCGCCCCAAAACATGCTTCTCCTGCACAGCGCCACCGAGCTGG
CCGAGAAGCCTGAGCTGATCCAACCCTTCGTGGACAAGGCCTACTGCAAG
GGCTGGGGCACGGTGTACGTGACTGACGACCTCTTCGACGAGGGCAACCC
TTGGGACAACCCGCCGACCTTCTGGACAGCCTTTATCGAAGCCTCGAGGA
ACATCCCCACCGTGGAGTCCTGCGGCGACGGCGGCCTCAAGATCATCGCC
CCCCTCCTTGGCAACGACGACGCCGACACGGAGGCCATCATGGCGACCGC
TGACCCGGGGGACTACGGCGACAGGATCATGGTCGCTATGAACGTCGAGA
TCACCGAGACCGGCGAGTCTACCGACAGGGCTGCCGCGGTCAGGGACGCC
GGGGCGAAGGTGCTCTGCTACATCGAGGCCGACAAGTACGGCAACGACCT
GGCCACCCTCGAGGAGGTCGTGGAGACGTATACCTTCTTCCCCCTCAACG
AGATCTGCGGCGGGTTTTTCTTCGGGGCCTTCAACATCCTTCTGGCCATC
GAGGACATGCCCGGCATGCAGTCCCTCTACCTCAAGACCCAGAAAACCTT
CCTCCAGCCGACCGTGGTGTTCGCACCCGAGGTCCAGGACTACTCGGACG
GCTTCGAGTCGAGCTACAGCTTCAGCTACGACTTCGTGGAAGTCGATGAA
GATGACTGGTACAGCACGAACAACTGGGACAGCACCACCAACTTCGAGCT
CCCGTGGGAAGACGTTATGACCGAGACTGACCTCGTTGCGCTGGCGGAGT
CCCTCACCGTGGGGCTGGGTGACGGCGCCACGGCCGGCGAGATCGTGGTC
GCGGAGGCCATAGACGGCGGCTCGGTCATCCCCGAGGCCCCCGAGCCCAA
CGAGAGCACCGCTGCCCTCGTCACCGGCTACGCCGGGGCCCCGGAGAATG
GCGACAGGGAGAGAGAGAGACGGCCGGCCGGCCGCCGGCCGTCAGAGCGT
TGGCTACCGGAATTCAAACCGCACGACACTCGTTAAGGTTAAGGAGAGCG
TGTGACTGCTACGACCCGAATACAAGCCACACGAAACTTGGGGAAGGAAT
CGAGTGTTTCGAGTGTTTGGTTTGCCCTTTCCTTTCCCTCTGCCAGATAG
AAGCGTCGTCCCCTTAATACGCGTTTTGTTCGGTGTTGTTTTTGTTTTTT
TTATGTTCGGAACTTCAAATCCGTGACGAGGCACAAAATTCAGTGGTGTA
GAAATCCTCGCGTTGTGTGTGCGTGTGCGTGTTTTTTTTAGGGGGGTCAT
TCGCTTGTTTCCTGGATTTGCTGGGAGTCCTAATCCGTGTAAGGGTGGTG
GCGGCGGGGCACGCGGTTGGATAGATGGGCAGACTCACTTTTGCGTACGC
ACCACGACCCATTTTGTCCGTGTCCTGCCCGGTGCGCGCGAAATTATCTT
GAGCCTGTCCTTCGATGGTTTCTTGAAACATTTTTGTCCATCGATGACTT
CTTCTTGTGTGTGAGTGGCGTTGTTGTGCATGCGGTACACAGATGCACCA
CAAAAACTAGCGTCTGTTTGTTTTCGGAGGGGCTGGAGGCAATGGGGGAA
AAAAATGGTCTAGGTTGTAGACTAGATCGATTGCTCTCGCACGATGAGTG
CTGATCGTTGCAGATGTGCATGTAGTCGTGTTGTTTGTTGCCTTCTCTCC
CTCTCTCTCTTGAGAAGGAGAGGAGAGAAGGCAAAAAGAAACACCATGGC
CGAGAACAACGGAAACGTTAAGGTAGAAGTGGTGGTTGTCTTGTCTTTGC
ACCCCGAGTACGGTTTTGGTTCACGGCTAACGCTTTTCCCATTTCGCGAG
GTCAGGTCAGGTCAGGTGTTGAGGGGTAATAACCTCTTGGCACATGAGAA
ACCTACCAGCGCGTTTAGTGTTCGGTGGTGTAGTACTGTAATACTTGCTT
CGTCTGTTGCTGGTGCGAAACCCTTACAATGGTGAATTATTTTGTATTAA
CGTGTTTTTCGTACGCCGGATGACGTTCCCATTCGGGGGGGCGGGGGGGG
GGGGGGGGCGTAAGGGCCGAGACTCCGGAGTGCCCCGTGGGTTGGATTTT
ACCCCAGGGTCTGTACCCGTTCGAGTAGTTCGAGCTGCCTGGTACTATCT
ACCACGCTTAACGGTAACGTGCTTGCTTGTGGCTGCGCAAAGAGCTGCCT
TCGCAGCTTTGCACCGGGTGGGTGTCGTTGCGACGCGCACGGCGCGCGGT
GCTGCTGCACTGTGACGGGTGGCTTGCCTTTTGCTTGCTATTGTTTTCGT
GGCTCCAATTCGAGGAGACCACCGTCCCTGTCCCAACCCTTTACGTTTCT
TAATTAAGTTGCTGTAGCATGTGTGTGTTCTTCGACGACTTGCAGCAAGA
AGAGTCGAGGGTAGAGGGTAGAGGATATACTAATGATACCCTATCGATTT
TTGGATATTCGGCCGCTGAGCCTTTTGCCGTTTGCGGTGAAGACGCAAAG
AGAAAAGGCACGCGCAGTTACTGTTACTAC

protein sequence of Ec-28_000500.1

>Ec-28_000500.1 ID=Ec-28_000500.1|Name=Ec-28_000500.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=512bp
MMGGTTLFAVAAAGLLNVAVSQEFPAMEFVIPLYIAPMFDNGTTVTIDPQ
WTALAETAATGATVFGILNPASGPGEVTDASYPDVIDYVKGAGAKMLCYV
ATTYGNKTTGSVEEEITAYQSEARVVFNTGQAADEQYFSFSPPAEVLGYE
NYFKAVRQLGVPETSDISTPPQNMLLLHSATELAEKPELIQPFVDKAYCK
GWGTVYVTDDLFDEGNPWDNPPTFWTAFIEASRNIPTVESCGDGGLKIIA
PLLGNDDADTEAIMATADPGDYGDRIMVAMNVEITETGESTDRAAAVRDA
GAKVLCYIEADKYGNDLATLEEVVETYTFFPLNEICGGFFFGAFNILLAI
EDMPGMQSLYLKTQKTFLQPTVVFAPEVQDYSDGFESSYSFSYDFVEVDE
DDWYSTNNWDSTTNFELPWEDVMTETDLVALAESLTVGLGDGATAGEIVV
AEAIDGGSVIPEAPEPNESTAALVTGYAGAPENGDRERERRPAGRRPSER
WLPEFKPHDTR*

mRNA from alignment at chr_28:503666..516092+

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-28_000500.1 ID=Ec-28_000500.1|Name=Ec-28_000500.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=12427bp|location=Sequence derived from alignment at chr_28:503666..516092+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGATGGGAGGTGAGTGAGGGGGACAAGCTCTCGCGGGATGTGGCGGTCG
GCATTTGGTTGGTAATGGTCGTCTAGATAGACCACCACACAGATTTCTTG
ACCAATCAAGAAATCGGGAGCTTCACGTATGTTGTCGGTATGCACGCATA
CATACGCGATGCTGATCCCGTCGGAGACAACGGCGGGCAAAGCCTATCAT
CTATCGGCCATTGCGCAAGAGGCAATGCAGCAGGGGTGAACCGGAAACCA
TCCCGTTTGCATACCTTCTGGTGAGCACACGGAGCAAAAACATGTATAGG
TGACACACTGCACCCGCCCGGCTGCTTGTACACACCAGATTTTGTAAGTT
GACACGAAGCCTCTTGCGATCTCTGGTGGCGGGGAAACTTGGTCAAACAA
TGGTATCCATACAGTTTAATGTGAAGAAAAACAACAACAACAACAACAAA
TACATCCCACACCCCAGGCAGGCAGGGGGTTATCTCTAGACCCCGCGCTG
GAGGCCGCCTATGTAGACCGCGGGGCGGCCGCCAGAGCTCTAGAGTCGTG
AGCGCAGCATCACAGACAGCAGTTAGTTGCACCTGGGATGCGCTCATCAT
TTTGCACACAAGCATCAAAGCCAAGCATTTTTTGGACGCGAACAAATAAA
ATGACCGGCGACCCGAGAACATTTTACTGTACGACAGGGTTCTCTTCTCC
CCTCTTCCCAGCTGTCGATCGGATCGCAACTTGTTACCCACCCGTTGGCC
GATTGAGTGACCTCGGGCCGTGCCGGCAAACTGCTGCAACTATCAGCCTG
TTGCCCCCCTTGGTCGCACACACTCATGGCGTGAAGTGCGCTCTCACGCT
TGAGCGGACGGGAATTGTGTGGGCCTCTCTCTCCGGAGAGATAAAGTATG
CCGAAGGACCTGTCTCAATGTATGTATGTACATGTATGCGCCTCGATGTA
CACCTGCTCTAAACCAACTGCCGGAGAGGCTTCACTGCTTCACTAAGTAA
TCGCCGTGAAACTATTTGCTGTTCCAGCCGTCGAGCGGTAGATACGTTGG
ACAGGTTGCGATCTCGGAAGGCTTCCCCTCCTTTTGAGCGTGCTCAAGGC
GTGCTCGCCAAGAAGTTATTGCATAGATAAATAGCCGGGGGGAACTTTGG
ATGAAAGAACTCTCTGGCGACAGCTGTGGATCTTTGTGCCATATGTCTTG
CGTGCCGAATGTGCAAACAGATGGATGGGCACATGGGCACATTCGTGACC
AGGCCGGACGAACAATCCATCCAGCAAAGGAACGGTTTCTCGTCACGTGG
TTGCCCACTAGTCTAGACTATAGACATTATCGTCACCCCTGTTCTTAAAT
AATACTTCGAACGCACGCATAGATAGGGCCGCGACAAGGCGAAAGAAGCA
GTGCACTCCTCCTCCGGCCTGTTTGCCTCGCACAACTATGTAGTCTACGC
CCGCAAAACTAACGAGAGTGCCAATACTACTCTCCGCCACTCGGTCTACG
CTTTGGATACATAAATACGAGACATAATTCGTTCTCATTTTTATTCCTGT
TGGTGTTGTTGGTGTTGATGGTGGTGGTGTTGTCGCCGCATCCATTGTTT
TTGCGCAGGTCCTTGTGTACCCTTCGTTGCTGTCGCTCCCTCTTGCGCAC
AATACTTGCGCACAACAACACTACACACAGGAAGGGGTTGATACAGGTCT
GGATGATGTCGAGTACATGTCATGTATCGGCCTGCTGTTGTTTATTTTTT
GCTCCAGAACATCAACATCGGGGTATCTGTAGTTGGCCCGACCGGGGTTG
ATCCGTATCCATCCGTCGTGTGGTGATCCACTCACAATAATGACTGTAGG
TTTTGTGTGTCTATCGTATCCGAATACTGACTGACTGGTTTGGCTTTACT
GGCGGCGAGGGATGGTTGTACATTTATCACGAGAAATTAGAGAAATTAAC
TCATCAAAGTGTACCGCGACAGGAAAAGAAAGAAACAAGAAAATAATTTC
CCTCCCTCCAGGTGCCCATCTTCCTTCCTGCGTCACCCCGGCTGGTGTCT
GAAAATAATAAATAAGTAAATAATACCGGATCCCGCGCAACAAAATATAT
CTACGCCAGCAGCCGGACTAACGGGACGACAGAAACACCACCTTGTTTGA
TTCTGTCCTCGTCCAACACCCGATTTTTCGTATTGGATGATGATGGCTTT
GCCAACAACCCATTCAAGAGTAACGGAGTCCACGAAGAAGACAGGCTGAC
ATCTCTTATTATTCCATTTGGAAACAATGGGCTGGACGTCGTCGAGGTCT
CGCCTGAATCCGGGGGTGTTCGCGAATGTTGCTGGTGGCAACCTCACCAG
AATTTTCTCGCCGGGGGGGTCGGGCGCGTGCGGCACGTTGCCCTGCTGAA
ACGCAATGAATGTTCTCCAGGGCAGCGCAATCAATTAGCAGAGAGAATAG
GGCAGCCGACCGAACAGAAGCAACAGTAGTTCTGTGGCCGCGCCAAGAGA
TGATGGTTATTTACTTGCTAAATCGATCCTCGATTCAAATGTCAGTATAT
TTCACGGTAGCAACCTCCCACCAACGGGTGATTTCGGGCTTTTAGCCTTC
GATTCACCCGTGAATTTGTTTTATATTGTGCGTCGTGGTGCCCACAATCG
GGCTTATGGCACAGGGATGCGCAATAAATGCAAGAGAGAACAGCACGGGT
TGTTATTTGTTGCATTTCCGCACCGGCCGGTGTCCTGGGTATTACCGCAC
GCACCCTGTGCCATATCAACGATAGTCTATATAACCTGTGTAGGATGTCA
AGTTTCATACTCCCCAAAGGTACCCGTATAGACTACCCTCCGGGCCACGT
ATTGAACTGTAGACTATGTCCCGAACGGCTGGGAGATAACAATTGAGGCG
CAATCCTTCCATGTTTAGACATGGTGCCGTCGAGGTACGCGTAGAAATGA
ATCATCAATCGATGATTTTTTATAGAACGATCGCAACCAACCCCGTGCTA
CAACATTGTCACACGCACAAACAACCGCTGTATGCGATGTATCGTATTCA
ACCTTTCACTCGCTCGCGTCGTTCGGTGATACTCCGAAGGTTTTTCCCTC
CATCGCGGCTGACTGTGAGATAGATGCGACTCCCGTTGGGGCTGCTTTGG
TACAGACACCACAAACAACAATGATGTGACGCGATACGGTTATCTCCTCG
CAAACAGAATAATAGTCTACAGCAGTCAACAAATTTCTTGATCGCTCTTC
TGCTGTTCGTTGCTGTTTGTCTCAGCAGGGACTACGCTGTTTGCGGTGGC
GGCGGCGGGCCTCCTGAATGTCGCCGTCTCGCAAGAGTTCCCCGCGATGG
AGTTCGTGATCCCACTGTACATCGCTCCGATGTTCGACAATGGCACCACC
GGTGAGTGCCCGATATGCCTCTAAGGGTAAGAATGATTTTTTTGCCGTGC
GACTTTTCGACGTCAATCTCTTGGTTCGCCAGCGAGCAGCGCTCCTTGCA
AGCATTAGTAGGAAGAAGTGCATCACGTTGTCGTACCACCTGAGGAATGT
TGTCGCCGGTGGTAACGCCCACATCATCAGTCGAGAATCAAGGTGGACGT
TGTTGGTTGCAGGAGCCACCAAGCAAGGCCCCTCCCCGCTCTCCCCCTCC
CTCCGTCTGTACCTTGAAACGATCGACAAAGAATAATAATGTCCTCCGCG
TTTAATTTTTTTACAACACTAATTCTTGAAGGACTTTTTTGACCGTTCAA
GATAATAACTGAAATATCGAAGGCAGTCAATGTATGTCTTCGCAGTGAGA
GGGGGAGAAACAAACCTGCCACAGAAAAAGCTGCCGCACTTGAGAACTTG
GCAGTTGAGAAAATGAAGAACCCCAGCGTCTGCCAAAACTAGAGGTTCCT
ACGCTAAGTGCGGGCGTTTCTCCGTTTTTCCTATGCTAAGTGCGGGCGTT
TCTCCGTTTTTCATATGCTAAGTTCGGGCGAGTTCTCCGTTTTTCATCAA
CTCTTCTTGCTTTCCGTCTTTCTTTCTCTTCTCAATCAACAATCTGTTCG
GTCGGTTCAGTCACGATCGACCCGCAGTGGACGGCGCTTGCCGAGACCGC
GGCGACGGGTGCGACCGTGTTCGGGATCCTCAACCCGGCGAGCGGGCCGG
GTGAGGTCACCGACGCCAGCTACCCGGACGTGATCGATTACGTCAAGGGA
GCGGGAGCCAAGGTGATGATGGAGACATGATGTGATGACCTGCAAGTTAC
GGTAGTTCGTGGTGTGGTTGTGATGATGCAGTTGTGATGACCTGAAAAAA
CGTGACAGCAAGTAAGTCAGTGCTTGGTGTGTTTCTTTGTTCGGAATATG
ATGACGTAAAATGACAAAAATTTGGACGATATTGTGTGAAGCGGCATACG
GAAGAAGGCGCGGGGTCACGCGAAGGTTTCGGTTGCTGTGTACGTCGATG
GAATACGTTTCGATTTTCGATATATATCAACCACCGTGCTCTCAGACGCA
ATAGGCAGAACGCAGACGAGTTGGGCTGGGCCCCTCTTGTCGCTGTCGGG
TGTGCCAGCATGACGTGTCTTCGTGCCAACGATACTTGGAGAGAACGAGG
GGGGGGGGGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNGCGCCAGGCATCCTTGGAGTGAACGAGGGGGGGGGGGGT
TGGTCGGATAGAGTGCCACCCACCCCCGCATAGCCCACATGAACGGTAAA
TCGACAGCGTGAAGCTCATGTTGGTGCATCGGGCTACTTAGCTGTGGCTG
GCGGTAGGGCATGGTTTACTTTATACACCAAACACCCTGCCGGGCCCTTC
GCTTGAACGCGTGCTGCGCATGGAGACGAACCGGCCGGTCTCGCGGGGCG
TCTTGGCAAGAAACACGGCATGACTCAGTTTTTGATTGAGTCACCCACGA
GTGTTCCGCCACCCCTGACCCCACCCCGCTTCTTGTACTGTTGCAACCAC
AACAACCTCGTGTGTAATAGATGCTGTGCTACGTGGCGACGACGTACGGC
AACAAGACCACTGGCTCTGTGGAGGAGGAGATCACGGCCTACCAAAGCGT
GAGAGAGGGACCCCGGGGGCTGGTCGTCGTCGTTACACGTTCGGTCGCCG
TTGAATCGAATCTTTTGTCGGTTGTTGCTCGCTCTGCACGGGATGAGAAA
TTAGTCTTGAGCTACCAAAGAGTACCGTTGATGGTATCGTGAAGGAATTC
TTGTCGATTTTGAGAGTGGGCCTAATTACCCCGCTGCCCTGTGGGGCGCC
GAGCTTCTGCCTGACTGAAAAGGTATTTCCTCTAGCGTCCGTAGAGCATG
CATTCCCCCGTCTCTCGCCGCGTGGGTGCACGGCCCTCCCGGACCGCCTT
CGCAAGAAATTCAGGTTGGGGGTACGCAGACCCTATCCCTAGCCCTTACC
CCAACTTCCTCGATTGCATACTACATCCAACATGTTTACGTAATCGAATC
CCTGGAAAAGGCTACGGCCCGTCCCTAACTCCCCGACAACCTCTGCTGTG
ATCGTTTTATTCGTTCGTGCCCTCGCGCCGTATGCCCCCCCCCCCCCTCC
TTCGTTCCAAAGCTGCTATTATAACTTTACCCCGGGGCCTGCGACGGCAT
CTTCTTCCACGAAGCCCCCCACCTGCTCACCGATGCGGGCAACCTCCAGA
TCTACACGGGCCACAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGCAAAGAGAAAGAAAAAGA
AAAGGTACCTTGAGGTAGCCCACCCGCCCACCGCCCCAGGTACCCCCTTG
AAAGGGGGGGTCACGATTGTTTTTTTGCCATTTTTTGTCGCGAAACGCAG
AGCATTACTGCACGCCTTCCTATTAGACCATCGGCCGAAAGGCGGGGGGG
GGGGGAAATACTCGTGTTTCGCAGGCCTTCGGGTAGGACGGGATTCCGGA
GGCACGCTCCTCGAGAGGCCGGCCTGGCTGGTGGTATTAAACCGGGTAGT
TCCGTCTGTTTCTTCGCCGAGTTCTTAACCCCCCGCCCACCCCCCACCCC
CCATCTCTCTCCCGCGGTGCCTTGCACCTTGCAGGAAGCTCGCGTCGTCT
TCAACACCGGCCAGGCGGCAGACGAGCAGTACTTTTCCTTCTCGCCCCCG
GCTGAGGTCCTGGGTTACGAGAACTACTTCAAGGCGTGAGTTCGCGGGGT
CCATTCCCACGCTTTCACCGGGGGGGAGGGGAGGGGGGGGGGGGCGACTA
CTACCGTCGTCGTTCGTTTTCGCTTGCCCACTGGGCGTTTGTTGCGGCCC
GTCTCTTGCTTCTTGTTGCCGTGGTTTGTTTTGTTTTATCTGGCGATGTG
CGGTGCTGTACGGTAGCTGCTAGAAGCGCGTCTACTTGCGGCAGGCTGCT
CTACGAGCCCCTCACTTGCGCCTTTGTGTTGGCAAAAAATTGTTTTTTTT
CATACCAGCTCGTGCGCCGTGTTTCGAAAACTCTGACCGTGCATGGTCGT
GTTGGGTGTATTTTTTTTTTGCAGCGTGAGGCAGCTCGGAGTGCCGGAAA
CCAGCGACATTTCCACGCCGCCCCAAAACATGCTTCTCCTGCACAGCGCC
ACCGAGCTGGCCGAGAAGCCTGAGGTACGTCTGCATATCACACCCATCTA
AAGGTCGTTGTAAATACGTTTGTTTCCTTCCCATTCTCTTCGTGTCTCAT
CACATCTGGTAAGTGTACGGCAACGTGTATGCGTTTCCTGCCTCCTCTCT
TTTGGTGTCCCATCACAACCTCCCCGCGCTTTCCCGTCGCCACCACCTCC
TTGCTCGTTCTCTCTCCGGCCGTCAAACCACGACAGCTGATCCAACCCTT
CGTGGACAAGGCCTACTGCAAGGGCTGGGGCACGGTGTACGTGACTGACG
ACCTCTTCGACGAGGTGCGTTTTGTTTTTTTGTATACTTGGTAGTCTTTG
CTGTTCTTTTGTCGACGCCTGTTGTACTCGTCGACGCCGCCATCGTCTTC
GTCGTCGCTGTATTAGTCACGGTTCTTACCGTTGTCGTTATCGTTCCTCT
CGTCGGCCGTGTACGCAAGGGTGTCTGTAGTCCCCAGCCCTTGCATCAAA
ACCCGCCGCCCGTCCGTCTGTCCCGTGAGATTGTCCGACTCCCGGCCTCG
TGTCGTCTCCTTTGGCTGTCTTTGCCGGCTGCCCAGGGTGTTTGTCCCCA
GCCCAACTTTACAACCCGGACGACTGACCCGCTACAATGAAATAACTTTT
CGATTTTCCGTGCCGTGTAACTCCTCTCCTCTACAGGGCAACCCTTGGGA
CAACCCGCCGACCTTCTGGACAGCCTTTATCGAAGCCTCGAGGAACATCC
CCACCGTGGAGTCCTGCGGCGACGGCGGCCTCAAGATCATCGCCCCCCTC
CTTGGCAACGACGACGCCGGTGAGTGGTAACACGGCAACTTACCTGTAAA
CGTTTTTTTGCTCTCATTTGTTTCAAGAAAATGTCGGGGGGAAATATCAG
AGCATCCAAAGCCGCCGGTGAGTGATACCACGCCAAGTTACCTTGGGACT
TCGCTCGGCGAAGCTTATAAAGAGTTTGTCTTCCGTTTGTTTGTTTGTTT
TCGCCCCGCGAAGACTGCCGTATTGTTCGCAAAAGAAGATAAAAACTTTA
GAATTATCACCGGTAGGTCTCTTCGTACCGCCGTCGATGATACCATATCA
TTGAAAGACACGGCGTATACACACCCGAGGTCCTTTTCATTTCTGCTTCT
CGTGTGTTTTGTGGTAAAAGGGGTGTTTTTATTGTACCGTGTTCGGGGCG
CAGGCCAACGTATTTAGGTGCGCAAATTCTCCACATCCACACGCGATTTC
TGCCGGCGAAAACCAACGTCGCTCTCGTCCCCCTGTCGTGTGCTGCTCCC
ATTTTTTTTGTGTTCTCTCTTTTTGGCAGACACGGAGGCCATCATGGCGA
CCGCTGACCCGGGGGACTACGGCGACAGGATCATGGTCGCTATGAACGTC
GAGATCACCGAGACCGGCGAGTCTACCGACAGGGCTGCCGCGGTCAGGGA
CGCCGGGGCGAAGGTACAGAGCATACTTCCGTGTATGGGCACATACAGAC
TCAAGTAGAGGCCAGCATCCAGGCGGTTTTGCCCCCCACTCAAATGCAAG
GACATGATCCCCTGCGGCTGCGGTATTATTTCCTTGAACGGGGAGTCGTT
CCGTGGCGTTGGTACAGTGTATCCCGGACTCTCATTCGTGGGTAGAGATG
AATATGTTGTGAGGTTTTCGTACTTCCATGATATGATATCTATAGTAGGG
TGTGTGTGTCGTCGACTCGAACGGAACGCACACCGAGAAAACCCCTCTGG
GGCCGGCCGTATCGCCCTCATGCTGTCCGTCGCCGCCCTCCCCTGTTGCT
CGCGCTGTTGTTGTCTGTACGCTCTTCTTCCCCTTAAGGTGCTCTGCTAC
ATCGAGGCCGACAAGTACGGCAACGACCTGGCCACCCTCGAGGAGGTCGT
GGAGACGTATACCTTCTTCCCCCTCAACGAGATCTGCGGCGGGTTTTTCT
TCGGGGCCTTCAACATCCTTCTGGCCATCGAGGACATGCCCGGCATGCAG
TCCCTCTACCTCAAGACCCAGGTGCACGGGCGTTGTGGGAGGGGGGGCGG
GCGGGGGGGGGGGGACATGCAAACGGACGTATTATGCGGGGGGAAAGCGG
ACAATCATGTAGCGTAACCTAGGAGCGTGTAGGGTTAACCCTAAGGAAAA
TGACCTATGTAGGCTTCGCATCACGCTCAGCTGTATTCATAACCACCCCC
CCTTACGATCCGTCTCTCCGGTGTTCGCAACACGGCCATATTCTCGGAGC
AGAAAACCTTCCTCCAGCCGACCGTGGTGTTCGCACCCGAGGTCCAGGAC
TACTCGGACGGCTTCGAGTCGAGCTACAGCTTCAGCTACGACTTCGTGGA
AGGTGTGAGCGCTTCGGCAATCTTGCTTTTTGACTCTCTGCGTTCCCGAA
GAGCGCCTGGCGGACGATGAGTTGAGGCGCGCGCCCCCCTTTTCCAGTGA
CATGCGATAGGATGCTAGCGCTTTCCTGCCGAGGGCTTGATGTACCCCAA
TGACACACGCGCAAATCGTTTCTGCGTGGTGCGCCGCTTTTTTGTATTTC
GGGGGTCCGCGCTCTCGTGTTCTGTTGTCCGTTTTGTTTTTCTGCCACCC
ATCATCGTGGATCGGTCTGTACAAATCAGTGCGATCGATGCGAAAGTCTA
ACCTAACCTCTGTCCTTTCTTGTTTTCCGCGCGCCCTGCCGCAACCAACC
CTGTCCGGGACCGGCTGCCGCCTTTTTCTCTGTTCTGCTCGCGGTTCGAG
TCGATGAAGATGACTGGTACAGCACGAACAACTGGGACAGCACCACCAAC
TTCGAGCTCCCGTGGGAAGACGTTATGACCGAGGTGAGGGAGATAGTTCG
GCGGCCTGTATTTTTCCCCACGTAATTGTTTTTTTCCAGAAAGAGTTGAG
AGCATTTTTTTCAACCCAATTTTGTGTGTCGCGACGTACTACATTCGACA
CAAAACCAAACTTTGCCACCACCACACGAACGTCCGCAGGAAACCTCGTT
ACTCCGACGGCATCGCCTTCTTACCTGTTGTTCAACTCCTCAAAACGGTA
CCAAATGTCTCACGTTCGAATTTCATCACCTCTACATGAAGAGACCCCCA
GACACTTACGCTCACGCCCCCCCCCCTCCTTTCTCGACGAAAAAAACTTC
ATCGGGCCCGCAAGACTGACCTCGTTGCGCTGGCGGAGTCCCTCACCGTG
GGGCTGGGTGACGGCGCCACGGCCGGCGAGATCGTGGTCGCGGAGGCCAT
AGACGGCGGCTCGGTCATCCCCGAGGCCCCCGAGCCCAACGAGAGCACCG
CTGCCCTCGTCACCGGCTACGCCGGGGCCCCGGAGGTGGGAAGGAACTAG
GAGAAATTTTGGCGCTCGCGACGACGATGTTTTTGACGGCCTTTGCTGTG
CTTTTGCGTTGCTTTGTCATGCTTGATCTTTGATCTATATATGTTTTTTA
TGCCTTTGTCCGACACTTGCTTGCGATTACGATAGTATGTGATTCCTCTC
GGCTGCTGCGAAGCTATTTGGTTTCGTTCTCCGACAAGTGGCGCCTCTTT
GGGCGTACGAAGAACGAGATAATAGAAAACAACGTCCCTCCCCCGAAAGT
GTCACGACGCCCGGGGCGCTTGCCTCCAAGCTCAAACTATTGAACACCCC
CCTTTTCCTTCCCTCACCCCCCCCCCCCCCCCCCCCCCCCCCCCTCTGCC
TGACGCCATTGTTTTTTTCATGCGACCCCACCCCCCCCCCCCGGAGGGAG
GTGTTTCCTTTTTTTATCAAAAAAAGGCCCCCCGTGGCGNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATCGTCTAAAGTTG
GAACTACCTACAAACTCGCCCGATCCGATCGCATGGACTTAAGAATGGCG
ACAGGGAGAGAGAGAGACGGCCGGCCGGCCGCCGGCCGTCAGAGCGTTGG
CTACCGGAATTCAAACCGCACGACACTCGTTAAGGTTAAGGAGAGCGTGT
GACTGCTACGACCCGAATACAAGCCACACGAAACTTGGGGAAGGAATCGA
GTGTTTCGAGTGTTTGGTTTGCCCTTTCCTTTCCCTCTGCCAGATAGAAG
CGTCGTCCCCTTAATACGCGTTTTGTTCGGTGTTGTTTTTGTTTTTTTTA
TGTTCGGAACTTCAAATCCGTGACGAGGCACAAAATTCAGTGGTGTAGAA
ATCCTCGCGTTGTGTGTGCGTGTGCGTGTTTTTTTTAGGGGGGTCATTCG
CTTGTTTCCTGGATTTGCTGGGAGTCCTAATCCGTGTAAGGGTGGTGGCG
GCGGGGCACGCGGTTGGATAGATGGGCAGACTCACTTTTGCGTACGCACC
ACGACCCATTTTGTCCGTGTCCTGCCCGGTGCGCGCGAAATTATCTTGAG
CCTGTCCTTCGATGGTTTCTTGAAACATTTTTGTCCATCGATGACTTCTT
CTTGTGTGTGAGTGGCGTTGTTGTGCATGCGGTACACAGATGCACCACAA
AAACTAGCGTCTGTTTGTTTTCGGAGGGGCTGGAGGCAATGGGGGAAAAA
AATGGTCTAGGTTGTAGACTAGATCGATTGCTCTCGCACGATGAGTGCTG
ATCGTTGCAGATGTGCATGTAGTCGTGTTGTTTGTTGCCTTCTCTCCCTC
TCTCTCTTGAGAAGGAGAGGAGAGAAGGCAAAAAGAAACACCATGGCCGA
GAACAACGGAAACGTTAAGGTAGAAGTGGTGGTTGTCTTGTCTTTGCACC
CCGAGTACGGTTTTGGTTCACGGCTAACGCTTTTCCCATTTCGCGAGGTC
AGGTCAGGTCAGGTGTTGAGGGGTAATAACCTCTTGGCACATGAGAAACC
TACCAGCGCGTTTAGTGTTCGGTGGTGTAGTACTGTAATACTTGCTTCGT
CTGTTGCTGGTGCGAAACCCTTACAATGGTGAATTATTTTGTATTAACGT
GTTTTTCGTACGCCGGATGACGTTCCCATTCGGGGGGGCGGGGGGGGGGG
GGGGGCGTAAGGGCCGAGACTCCGGAGTGCCCCGTGGGTTGGATTTTACC
CCAGGGTCTGTACCCGTTCGAGTAGTTCGAGCTGCCTGGTACTATCTACC
ACGCTTAACGGTAACGTGCTTGCTTGTGGCTGCGCAAAGAGCTGCCTTCG
CAGCTTTGCACCGGGTGGGTGTCGTTGCGACGCGCACGGCGCGCGGTGCT
GCTGCACTGTGACGGGTGGCTTGCCTTTTGCTTGCTATTGTTTTCGTGGC
TCCAATTCGAGGAGACCACCGTCCCTGTCCCAACCCTTTACGTTTCTTAA
TTAAGTTGCTGTAGCATGTGTGTGTTCTTCGACGACTTGCAGCAAGAAGA
GTCGAGGGTAGAGGGTAGAGGATATACTAATGATACCCTATCGATTTTTG
GATATTCGGCCGCTGAGCCTTTTGCCGTTTGCGGTGAAGACGCAAAGAGA
AAAGGCACGCGCAGTTACTGTTACTAC

Coding sequence (CDS) from alignment at chr_28:503666..516092+

>Ec-28_000500.1 ID=Ec-28_000500.1|Name=Ec-28_000500.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1536bp|location=Sequence derived from alignment at chr_28:503666..516092+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGATGGGAGGGACTACGCTGTTTGCGGTGGCGGCGGCGGGCCTCCTGAA
TGTCGCCGTCTCGCAAGAGTTCCCCGCGATGGAGTTCGTGATCCCACTGT
ACATCGCTCCGATGTTCGACAATGGCACCACCGTCACGATCGACCCGCAG
TGGACGGCGCTTGCCGAGACCGCGGCGACGGGTGCGACCGTGTTCGGGAT
CCTCAACCCGGCGAGCGGGCCGGGTGAGGTCACCGACGCCAGCTACCCGG
ACGTGATCGATTACGTCAAGGGAGCGGGAGCCAAGATGCTGTGCTACGTG
GCGACGACGTACGGCAACAAGACCACTGGCTCTGTGGAGGAGGAGATCAC
GGCCTACCAAAGCGAAGCTCGCGTCGTCTTCAACACCGGCCAGGCGGCAG
ACGAGCAGTACTTTTCCTTCTCGCCCCCGGCTGAGGTCCTGGGTTACGAG
AACTACTTCAAGGCCGTGAGGCAGCTCGGAGTGCCGGAAACCAGCGACAT
TTCCACGCCGCCCCAAAACATGCTTCTCCTGCACAGCGCCACCGAGCTGG
CCGAGAAGCCTGAGCTGATCCAACCCTTCGTGGACAAGGCCTACTGCAAG
GGCTGGGGCACGGTGTACGTGACTGACGACCTCTTCGACGAGGGCAACCC
TTGGGACAACCCGCCGACCTTCTGGACAGCCTTTATCGAAGCCTCGAGGA
ACATCCCCACCGTGGAGTCCTGCGGCGACGGCGGCCTCAAGATCATCGCC
CCCCTCCTTGGCAACGACGACGCCGACACGGAGGCCATCATGGCGACCGC
TGACCCGGGGGACTACGGCGACAGGATCATGGTCGCTATGAACGTCGAGA
TCACCGAGACCGGCGAGTCTACCGACAGGGCTGCCGCGGTCAGGGACGCC
GGGGCGAAGGTGCTCTGCTACATCGAGGCCGACAAGTACGGCAACGACCT
GGCCACCCTCGAGGAGGTCGTGGAGACGTATACCTTCTTCCCCCTCAACG
AGATCTGCGGCGGGTTTTTCTTCGGGGCCTTCAACATCCTTCTGGCCATC
GAGGACATGCCCGGCATGCAGTCCCTCTACCTCAAGACCCAGAAAACCTT
CCTCCAGCCGACCGTGGTGTTCGCACCCGAGGTCCAGGACTACTCGGACG
GCTTCGAGTCGAGCTACAGCTTCAGCTACGACTTCGTGGAAGTCGATGAA
GATGACTGGTACAGCACGAACAACTGGGACAGCACCACCAACTTCGAGCT
CCCGTGGGAAGACGTTATGACCGAGACTGACCTCGTTGCGCTGGCGGAGT
CCCTCACCGTGGGGCTGGGTGACGGCGCCACGGCCGGCGAGATCGTGGTC
GCGGAGGCCATAGACGGCGGCTCGGTCATCCCCGAGGCCCCCGAGCCCAA
CGAGAGCACCGCTGCCCTCGTCACCGGCTACGCCGGGGCCCCGGAGAATG
GCGACAGGGAGAGAGAGAGACGGCCGGCCGGCCGCCGGCCGTCAGAGCGT
TGGCTACCGGAATTCAAACCGCACGACACTCGTTAA

Synonyms

The feature 'Ec-28_000500.1' has the following synonyms


Synonym
Esi0098_0003
Esi_0098_0003