Ec-28_000480.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-28_000480.1
Unique NameEc-28_000480.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length837
Homology
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BLAST of Ec-28_000480.1 vs. uniprot
Match: D7G9D2_ECTSI (Pyr_redox_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9D2_ECTSI)

HSP 1 Score: 1209 bits (3127), Expect = 0.000e+0
Identity = 766/780 (98.21%), Postives = 766/780 (98.21%), Query Frame = 2 
Query:  323 MRRLSLRPESSRSDNPSSTLGLGVGAILAMGGLLLATQGLPDDGNPAAMEAEGGRGGRHGGDDYHTSLASRT-------------GSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEEFPAEGSYRFYILTPEEAAAEGTSALDGFAGGWDGYEDXXXXXXXXXXXXXXXXXXXXXXXXXXXTTADAAMESILRMRPEAEILCLSDETPCPADDSDTHTGSYEADFRLLKTDLVASFNQWRRHLAFRKEGFANGXXXXXXXXXXTGDSRGADGGEGRWAYGLSKGKEIRYHTYEPHDLIIEPERRCVRLLLDGTEVYYDKCLIANAGKPRDFALGGXXXXXXXXXXXXXXXXXXXXPRGSGRRLXXXXRAKKAGDNGGRRGRSDKPLGIPEREAVGGGXXXXXXGSWRSRINKLTCLRDFVSLELLANDPSVKHVSVLGGGFLGCQVALALAERGRATGVAISQVYSERNPMGHVLPDYLAEHLRGELAKAGVAAVADTRLADLRYNSKTKRLEEQEREGAKHVVGGDDGKVGLETDYVVVASTDVDPGVEVASDSGLEIDERNGGIVVNGLFEAVNGVYAAGGAASFFDPNLGRGKGRRRIASHDHCVNSGLYAGYNMAATLTAAENDHEPAGSSTPSASXXXXXRRKGPPPAPHPRFYDHVPFWRSNLAACGVVMEGLGDVDPSLRTMGVWLDYGEDNRKASYRRGVVYYMRDDKGRKVPRNMALQFTIYGTELGAILKTHRVLYLLA 2623
            MRRLSLRPESSRSDNPSSTLGLGVGAILAMGGLLLATQGLPDDGNPAAMEAEGGRGGRHGGDDYHTSLASRT             GS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEEFPAEGSYRFYILTPEEAAAEGTSALDGFAGGWDGYEDXXXXXXXXXXXXXXXXXXXXXXXXXXXTTADAAMESILRMRPEAEILCLSDETPCPADDSDTHTGSYEADFRLLKTDLVASFNQWRRHLAFRKEGFANGXXXXXXXXXXTGDSRGADGGEGRWAYGLSKGKEIRYHTYEPHDLIIEPERRCVRLLLDGTEVYYDKCLIANAGKPRDFALGGXXXXXXXXXXXXXXXXXXXXPRGSGRRLXXXXRAKKAGDNGGRRGRSDKPLGIPEREAVGGGXXXXXXGSWRSRINKLTCLRDFVSLELLANDPSVKHVSVLGGGFLGCQVALALAERGRATGVAISQVYSERNPMGHVLPDYLAEHLRGELAKAGVAAVADTRLADLRYNSKTKRLEEQEREGAKHVVGGDDGKVGLETDYVVVASTDVDPGVEVASDSGLEIDERNGGIVVNGLFEAVNGVYAAGGAASFFDPNLGRGKGRRRIASHDHCVNSGLYAGYNMAATLTAAENDHEPAGSSTPSASXXXXXRRKGPPPAPHPRFYDHVPFWRSNLAACGVVMEGLGDVDPSLRTMGVWLDYGEDNRKASYRRGVVYYMRDDKGRKVPRNMALQFTIYGTELGAILKTHRVLYLLA
Sbjct:    1 MRRLSLRPESSRSDNPSSTLGLGVGAILAMGGLLLATQGLPDDGNPAAMEAEGGRGGRHGGDDYHTSLASRTARRATTSTEPNATGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEEFPAEGSYRFYILTPEEAAAEGTSALDGFAGGWDGYEDXXXXXXXXXXXXXXXXXXXXXXXXXXXTTADAAMESILRMRPEAEILCLSDETPCPADDSDTHTGSYEADFRLLKTDLVASFNQWRRHLAFRKEGFANGXXXXXXXXXXTGDSRGADGGEGRWAYGLSKGKEIRYHTYEPHDLIIEPERRCVRLLLDGTEVYYDKCLIANAGKPRDFALGGXXXXXXXXXXXXXXXXXXXXPRGSGRRLXXXXRAKKAGDNGGRRGRSDKPLGIPEREAVGGGXXXXXXGSWRSRINKLTCLRDFVSLELLANDPSVKHVSVLGGGFLGCQVALALAERGRATGVAISQVYSERNPMGHVLPDYLAEHLRGELAKAGVAAVADTRLADLRYNSKTKRLEEQEREGAKHVVGGDDGKVGLETDYVVVASTDVDPGVEVASDSGLEIDERNGGIVVNGLFEAVNGVYAAGGAASFFDPNLGRGKGRRRIASHDHCVNSGLYAGYNMAATLTAAENDHEPAGSSTPSASXXXXXRRKGPPPAPHPRFYDHVPFWRSNLAACGVVMEGLGDVDPSLRTMGVWLDYGEDNRKASYRRGVVYYMRDDKGRKVPRNMALQFTIYGTELGAILKTHRVLYLLA 780
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BLAST of Ec-28_000480.1 vs. uniprot
Match: A0A6H5L4I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4I6_9PHAE)

HSP 1 Score: 996 bits (2576), Expect = 0.000e+0
Identity = 695/1090 (63.76%), Postives = 715/1090 (65.60%), Query Frame = 2 
Query:  116 MLAVVVPGAQRVLARQAGHSQRPLGVIGRCRDCAEYPRKVPRSSLTAAAAGGEARCRAKDYGPWSTGGTMRRLSLRPESSRSDNPSSTLGLGVGAILAMGGLLLATQGLPDDGNPAAMEAEGGRGGRHGGDDYHTSLASRTGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEEFPAEGSYRFYILTPEEAAAEGTSALDGFAGGWDGYEDXXXXXXXXXXXXXXXXXXXXXXXXXXXTTADAAMESILRMRPEAEILCLSDETPCPADDSDTHTGSYEADFRLLKTDLVASFNQWRRHLAFRKEGFANGXXXXXXXXXX----TGDSRGADGGEGRWAYGLSKGKEIRYHTYEPHDLIIEPERRCVRLLLDGTEVYYDKCLIANAGKPRDFALG------------------------------------------------------------------------------------------------GXXXXXXXXXXXXXXXXXXXXP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RGSGRRLXXXXRAKKAGDNGGRRGRSDKPLGIPEREAVGGGXXXXXXGSWRSRINKLTCLRDFVSLELLANDPSVKHVSVLGGGFLGCQVALALAERGRATGVAISQ----VYSERNPMGHVLPDYLAEHLRGELAKAGVAAVADTRLADLRYNSKTKRLEEQEREGAKHVVGGDDGKVGLETDYVVVASTDVDPGVEVASDSGLEIDERNGGIVVNGLFEAVNGVYAAGGAASFFDPNLGRGKGRRRIASHDHCVNSGLYAGYNMAATLTAAENDHEPAGSSTPSASXXXXXRRKGPPPAPHPRFYDHVPFWRSNLAACGVVMEGLGDVDPSLRTMGVWLDYGEDNRKASYRRGVVYYMRDDK 2524
            MLAVVVPGAQRVLARQAGHSQRPLGVIGRCRDCAEYPRKVPRSSLTAAAAGGEARCRAKD+GPWST GT+RRLSLRPESSRSDNPSSTLGLGVGAILAMGGLL+ATQGLPD+GNP AMEAEGGRG  HG DDYHTS ASRTGSA  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    FPAEG YR YILTPEE AAE TSALDGF         XXXXXXXXXXXXXXXXXXXXXXXXXXXTTADAAMESILRMRPEAEILCLSD+TPCPADDSDT+TGSYEADFRLLKTDL ASFNQWRR LAFR+EGFANG  XXXXXXXX    TGDSRGA+GGEGR AYGLSKGKEIRYHTYEPHDLIIEPERRCVRLLLDGTEVYYDKCLIANAG P  F                                                                                                   G                    P                                                                                                                                                                                       R SGRRL    RAKKAGDNGGRR RSDKPLGIP REAVGGG      GSW+SRINKLTCLRDFVSLELLAN+PSVKHV+VLGGGF+GC+VALALAERGRATG+ ISQ    VYSERNPM HVLPDYLAEHL+GELAKAGVAAVADT LADLRYNS TKR+EE  +EGAKHVV GD GK GLETDYVVVASTDVDP V+VASDSGLEIDE NGGIVVNGLFEAVNGVYAAGGAASFFDPNLGRGKGRRRIASHDHCVNSGLYAGYNMAATLTAAENDHEPA SSTPSAS     RRKGPPPAPHPRFYDHVPFWRSNLAACGVVMEGLGDVD SLRTMGVWLD GE+NRKASY+RGVVYYMRDDK
Sbjct:    1 MLAVVVPGAQRVLARQAGHSQRPLGVIGRCRDCAEYPRKVPRSSLTAAAAGGEARCRAKDHGPWSTRGTVRRLSLRPESSRSDNPSSTLGLGVGAILAMGGLLVATQGLPDNGNPPAMEAEGGRGELHG-DDYHTSFASRTGSASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----FPAEGRYRVYILTPEEEAAEETSALDGFG-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXTTADAAMESILRMRPEAEILCLSDKTPCPADDSDTYTGSYEADFRLLKTDLAASFNQWRRLLAFREEGFANGGSXXXXXXXXXXTTTGDSRGAEGGEGRSAYGLSKGKEIRYHTYEPHDLIIEPERRCVRLLLDGTEVYYDKCLIANAGHPALFGTSLVKADIGLKKDLQFLNKAGTRASLRILELLKDASKLYTELTYMGMKMACNMPAGGVRKGARLCRLPLCKLLNDRIVGVLEKEHSISERQAGFRKKRGCIDHACTVGRIIQGRKRAGKPTYCFFLDVKKAYDTGQMWRVLKNMTECTKSAVMLDGELSKFFDIEQGVPQGCTLSPTLFQVFINDLLEVVEAVRKGVKNLRKESKGKEGLEVYGMLKKGIGFKDYLHGPMDAGTKLKVKFRTGDIGLRERRRRHRTVDEEDDEFKCDCGFECEDRVHVVAECPLYKKEREVGGDGTSEEEHASRDSGRRLRGRERAKKAGDNGGRRERSDKPLGIPGREAVGGGDSGSDGGSWQSRINKLTCLRDFVSLELLANEPSVKHVTVLGGGFVGCEVALALAERGRATGMTISQASTAVYSERNPMEHVLPDYLAEHLQGELAKAGVAAVADTCLADLRYNSNTKRIEEHGQEGAKHVVSGDGGKAGLETDYVVVASTDVDPCVQVASDSGLEIDEGNGGIVVNGLFEAVNGVYAAGGAASFFDPNLGRGKGRRRIASHDHCVNSGLYAGYNMAATLTAAENDHEPAWSSTPSASRSASSRRKGPPPAPHPRFYDHVPFWRSNLAACGVVMEGLGDVDSSLRTMGVWLDCGENNRKASYKRGVVYYMRDDK 1078
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BLAST of Ec-28_000480.1 vs. uniprot
Match: A0A836C7T6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7T6_9STRA)

HSP 1 Score: 270 bits (691), Expect = 4.300e-74
Identity = 206/548 (37.59%), Postives = 277/548 (50.55%), Query Frame = 2 
Query:  920 TTADAAMESILRMRPEAEILCLSDETPCPA--DDSDTHTGSYEADFRLLKTDLVASFNQWRRHLAFRKEGFANGXXXXXXXXXXTGDSRGADGGEGRWAYGLSKGKEIRYHTYEPHDLIIEPERRCVRLLLD--GTEVYYDKCLIANAGKPRD-FALGGXXXXXXXXXXXXXXXXXXXXPRGSGRRLXXXXRAKKAGDNGGRRGRSDKPLGIPEREAVGGGXXXXXXGSWRSRINKLTCLRDFVSLELLANDPSVKHVSVLGGGFLGCQVALALAERGRATGVAISQVYSERNPMGHVLPDYLAEHLRGELAKAGVAAVADTRLADLRYNSKTKRLEEQEREGAKHVVGGDDGKVGLETDYVVVASTDVDPGVEVASDSGLEIDERNGGIVVNGLFEAVNGVYAAGGAASFFDPNLGRGKGRRRIASHDHCVNSGLYAGYNMAATLTAAENDHEPAGSSTPSASXXXXXRRK---GPPPAPHPRFYDHVPFWRSNLAACGVVMEGLGDVDPSLRTMGVWLDYGEDNRKAS-----YRRGVVYYMRDDK 2524
            TTA AA+ESIL ++P+A+IL L+DET  PA  +  D            +  DL+ S+N+WRR         +               SR  D   G +   ++  +           + I+ +RR  R+LLD   + VYYDKCLIA  GKPR  +AL                                            +  RSD+   +P    +               IN L+ L DF +LE L +   +KHV+V+GGGFLG +VALALA RG   G+ +SQVY+E  PM  +LP YLA HL+  L + GV  + +  + DLR+N           +G+  +V     K  L+TDY+V+AST ++P V VA+ SG+E+D   GG+VVNG FEAV GVYAAGG AS++D  LGR    RRI  +DH VNSGL AGYNMAA + +A   H   G     A      RR+    PPP P P  Y H P  RS L+   V MEGLG++D  LRT+G+WLD  +   + +     YRRG+VYY+R DK
Sbjct:  269 TTASAAIESILNLQPDADILLLTDETASPAFHNQQDVADPQEPEGPSQMGPDLLHSYNEWRRQ--------STAVRTRPPPAPADISSRLPDLQPGGYGGPVTVAQRA--------GIKIDADRR--RILLDDGSSMVYYDKCLIACPGKPRRLYALRMADLLLVRPQVPF------------------------------KTSRSDRA--VPSCHLL----------LSVQMINTLSDLEDFQALESLKDSEHIKHVTVIGGGFLGSEVALALARRG---GLRVSQVYAEVAPMQRLLPAYLAMHLQRRLQQEGVEPIRERLVTDLRFNVD---------KGSVELVLQGWEKQALQTDYIVLASTHIEPRVGVATASGIEVDRDTGGVVVNGQFEAVAGVYAAGGVASYYDAALGR----RRIDRYDHSVNSGLLAGYNMAAAVASARAQH---GGKVDGAGVDSIGRREVDDSPPPGPFPCTYTHQPMLRSTLSGVEVCMEGLGEIDARLRTVGLWLDKNKTPARHAAGDPVYRRGLVYYLRGDK 737
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BLAST of Ec-28_000480.1 vs. uniprot
Match: A0A836CMS1_9STRA (Putative apoptosis-inducing factor 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMS1_9STRA)

HSP 1 Score: 232 bits (591), Expect = 2.200e-62
Identity = 180/540 (33.33%), Postives = 251/540 (46.48%), Query Frame = 2 
Query:  920 TTADAAMESILRMRPEAEILCLSDETPCPADD----SDTHTGSYEADFRLLKTDLVASFNQWRRHLAFRKEGFANGXXXXXXXXXXTGDSRGADGGEGRWAYGLSKGKEIRYHTYEPHDLIIEPERRCVRLLLDGTEVYYDKCLIANAGKPRDFALGGXXXXXXXXXXXXXXXXXXXXPRGSGRRLXXXXRAKKAGDNGGRRGRSDKPLGIPEREAVGGGXXXXXXGSWRSRINKLTCLRDFVSLELLANDPSVKHVSVLGGGFLGCQVALALAERGRATGVAISQVYSERNPMGHVLPDYLAEHLRGELAKAGVAAVADTRLADLRYNSKTKRLEEQEREGAKHVVGGDDGKVG--LETDYVVVASTDVDPGVEVASDSGLEIDERNGGIVVNGLFEAVNGVYAAGGAASFFDPNLGRGKGRRRIASHDHCVNSGLYAGYNMAATLTAAENDHEPAGSSTPSASXXXXXRRKGPPPAPHPRFYDHVPFWRSNLAACGVVMEGLGDVDPSLRTMGVWLDYG-EDNRKAS-YRRGVVYYMR 2515
            TTA AA+E IL+  P A+IL L+DE   P  D    SD                   S+N+WRRH++ R E   +                            L   K++R          ++ ERR + L  DG+E+++D+CLIA AGKPR F +                                                        E+ A           S R  +N L+ L DF +L        ++H +V+GGGFLG ++ALAL+ RG    V +SQVY+E  P+   +P YLAE++R  LA+ G+ AV++  + D+R +      +++E      V      K G  L TDYVV+AST VDP   +A  SG+EID  NGGIVVNGL EA+ GVYAAG  AS+ DP LGR    RR+   DH +NSGL AGYNMA         H                         HPR Y H P +RS+     +++EG+G++D S+RT+G+W+  G E  +KAS + RG+VYY++
Sbjct:  135 TTALAAIEGILQQDPGADILMLTDEAHLPRIDPPGNSDNPVTPPXXXXXXXXXXXPRSYNEWRRHVSSRLENEPDAFSSVPITL-------------------LLGRKKLR----------LDVERRALHLD-DGSEIFFDRCLIATAGKPRQFYVIDS-----------------------------------------------------EKSAY----------SLRECVNTLSSLDDFQALNSARETLGIEHATVVGGGFLGTEIALALSRRG----VKVSQVYAEIAPLSRQIPIYLAEYMRERLAEHGIEAVSERLVTDVRSDEDALMSDDEEENDDDRVDVEPSEKQGETLLTDYVVMASTHVDPVTTIARASGMEIDPSNGGIVVNGLLEAIGGVYAAGACASYHDPALGR----RRVDMLDHSLNSGLRAGYNMAGGRRVPLTGHS----------------------GNHPRLYMHQPTFRSHWEDLDILVEGVGELDASVRTVGIWVHGGAEGGKKASQFSRGLVYYLK 551
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BLAST of Ec-28_000480.1 vs. uniprot
Match: K3WXL9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WXL9_GLOUD)

HSP 1 Score: 219 bits (558), Expect = 7.230e-59
Identity = 173/548 (31.57%), Postives = 253/548 (46.17%), Query Frame = 2 
Query:  920 TTADAAMESILRMRPEAEILCLSDETPCPADDSDTHTGSYEADFRLLKTDLVASFNQWRRHLAFRKEGFANGXXXXXXXXXXTGDSRGADGGEGRWAYGLSKG-KEIRYHTYEPHDLIIEPERRCVRLLLDGTEVYYDKCLIANAGKPRDFALGGXXXXXXXXXXXXXXXXXXXXPRGSGRRLXXXXRAKKAGDNGGRRGRSDKPLGIPEREAVGGGXXXXXXGSWRSRINKLTCLRDFVSLELLANDPSVKHVSVLGGGFLGCQVALALAERGRATGVAISQVYSERNPMGHVLPDYLAEHLRGELAKAGVAAVADTRLADLRYNSKTKRLEEQEREGAKHVVGGDDGKVGLETDYVVVASTDVDPGVEVASDSGLEIDERNGGIVVNGLFEAVNGVYAAGGAASFFDPNLGRGKGRRRIASHDHCVNSGLYAGYNMAATLTAAENDHEPAGSSTPSASXXXXXRRKGPPPAPHPRFYDHVPFWRSNLAACGVVMEGLGDVDPSLRTMGVWLD------------YGEDNRKASYRRGVVYYMRDDK 2524
            T A AA+E+I +  PEA+IL LSDE   P  D+D +T + + D+++ +  L+ ++N+WRRHL  + E                G++  ++         L  G KE+R+          E  R C   L DGTE+ Y+KCLIA+                                                         S   L + +   +          S + RIN+ T L DF  L+ L   P +K V+V+GGGFLG +VA ALA   R   +    V++E  PM   LP YLA+ L  +L + GV  V D  +  L+        +  E EG   V G   GK+ L +DYVV+AST  DP      DS LE+D+ NGGI+VN   EA++G++ AG AAS++DP LGR    RR+  +DH VNSGL AG NMAA+L+++                               + Y H P +RS+L    VV+EG+G+++ SLRT+G+W+                    A++ RG+VYY++ +K
Sbjct:   25 TAAHAAIEAIRQEDPEADILVLSDENALPRLDTDPYTSALDDDYQIAEP-LMQTYNEWRRHLTAKLE------TEPSDNNIANGNNSNSNSSTFLPPLTLLLGNKEMRFDA--------EKNRIC---LGDGTEIRYEKCLIAS---------------------------------------------------------SAAALYVLDSNRIS--------YSLKDRINRCTTLTDFTQLDQLHKRPEIKSVTVIGGGFLGTEVATALATDPRNAELTTRLVFTESAPMSRSLPFYLAQELTTKLQRIGVDVVPDHLVTSLKCEG-----DADECEGVI-VEGLGKGKMKLHSDYVVLASTHTDPNFRFGRDSCLEVDDVNGGIMVNAQLEAISGLFVAGNAASYYDPYLGR----RRVDRYDHAVNSGLVAGRNMAASLSSSTGKM---------------------------KNYRHQPMFRSHLQGIDVVIEGIGEINSSLRTIGLWVQPRNSSIHTRQTGMSSTTPPANFERGIVYYLKGNK 452
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BLAST of Ec-28_000480.1 vs. uniprot
Match: A0A484E599_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E599_BRELC)

HSP 1 Score: 215 bits (547), Expect = 8.740e-57
Identity = 181/559 (32.38%), Postives = 247/559 (44.19%), Query Frame = 2 
Query:  920 TTADAAMESILRMRPEAEILCLSDETPCPADDSDT--HTGSYEADFRLLKTDLVASFNQWRRHLAFRKEGFANGXXXXXXXXXXTGDSRGADGGEGRWAYGLSKGKEIRYHTYEPHDLIIEPERRCVRLLLDGTEVYYDKCLIANAGKPRDFALGGXXXXXXXXXXXXXXXXXXXXPRGSGRRLXXXXRAKKAGDNGGRRGRSDKPLGIPEREAVGGGXXXXXXGSWRSRINKLTCLRDFVSLELLA------NDPSVKHVSVLGGGFLGCQVALALAERGRATGVAISQVYSERNPMGHVLPDYLAEHLRGELAKAGVAAVADTRLADLRYNSKTKRLEEQEREGAKHVVGG----DDGKVGLETDYVVVASTDVDP------GVEVASDSGLEIDERNGGIVVNGLFEAVNGVYAAGGAASFFDPNLGRGKGRRRIASHDHCVNSGLYAGYNMAATLTAAENDHEPAGSSTPSASXXXXXRRKGPPPAPHPRFYDHVPFWRSNLAACGVVMEGLGDVDPSLRTMGVWLD---YGED---NRKASYRRGVVYYMRDDK 2524
            T A+AA+E+I +    A+IL LSDE   P  D       G    + R L   L+ S+N+WRRHL+ R E                                 S G        +   L  + E+ CV  L DGTEV YD+CL+A+AG+PR F                                                        + + + V          + + R+N  T   DFV L+ LA      ND +++ V V+G GFLGC+VA ALA   R   + I  V+ E+ P    LP YLAE L   L  AGV  V +  +  LR      RL++ E E    V  G    D  +  L+ DYVV+AST  DP      G    +  GLE DE+NGG+VVN   EA++G++ AG AAS++DP LGR    RR+  +DH VNSGL AG NMA +L  A                               + Y H P +RS+L    + MEG+G+VD S RT+GVW+     G D   ++++SY RGVVYY++ +K
Sbjct:   82 TAANAAIEAIRQEDASADILVLSDENALPRLDFGVGNDNGDEGGNERPLAPALLESYNEWRRHLSARFEE----------------------------EVASSAGPPPLTLLLDKRPLEFDVEKNCV-FLGDGTEVRYDRCLVASAGRPRHFY-------------------------------------------------------VLDSDRVS--------YALKDRVNTCTTRADFVRLDQLADGASEQNDSALQSVLVIGAGFLGCEVACALATDQRNNHLKIKLVFLEQLPAARTLPPYLAEELARRLNCAGVDVVPNRLVTSLRP-----RLDDDENESDSGVTVGLLAKDKPEAALDADYVVLASTHTDPATTLRMGRATRTGGGLERDEKNGGLVVNAQLEAISGLFVAGNAASYYDPYLGR----RRVDRYDHAVNSGLTAGRNMAKSLRGAGKM----------------------------KTYRHQPLFRSHLPGVSLRMEGIGEVDSSFRTVGVWVQPPCIGVDRNGSQRSSYERGVVYYLKGNK 511
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BLAST of Ec-28_000480.1 vs. uniprot
Match: D0P394_PHYIT (Apoptosis-inducing factor 1, putative n=15 Tax=Phytophthora TaxID=4783 RepID=D0P394_PHYIT)

HSP 1 Score: 211 bits (536), Expect = 2.580e-55
Identity = 183/565 (32.39%), Postives = 249/565 (44.07%), Query Frame = 2 
Query:  920 TTADAAMESILRMRPEAEILCLSDETPCPA--------DDSDTHTGSYEADFRLLKTDLVASFNQWRRHLAFRKEGFANGXXXXXXXXXXTGDSRGADGGEGRWAYGLSKGKEIRYHTYEPHDLIIEPERRCVRLLLDGTEVYYDKCLIANAGKPRDFALGGXXXXXXXXXXXXXXXXXXXXPRGSGRRLXXXXRAKKAGDNGGRRGRSDKPLGIPEREAVGGGXXXXXXGSWRSRINKLTCLRDFVSLELLANDPS------VKHVSVLGGGFLGCQVALALAERGRATGVAISQVYSERNPMGHVLPDYLAEHLRGELAKAGVAAVADTRLADLRYNSKTKRLEEQEREGAKHV----VGGDDGKVGLETDYVVVASTDVDP------GVEVASDSGLEIDERNGGIVVNGLFEAVNGVYAAGGAASFFDPNLGRGKGRRRIASHDHCVNSGLYAGYNMAATLTAAENDHEPAGSSTPSASXXXXXRRKGPPPAPHPRFYDHVPFWRSNLAACGVVMEGLGDVDPSLRTMGVWLDY------GEDNRKASYRRGVVYYMRDDK 2524
            T A+AA+E+I +    A+IL LSDE   P         DD +T     EAD   L   L+ S+N+WRRHL+ R E                 D   +  G       L K          P +  +E  R    LL DGTEV Y++CL+A+AG+PR F                                                        + + + V          + + R+N  T   DFV L+ LA   S      V+ V V+G GFLGC+VA ALA   R   +    V+ E+ P    LP YLAE L   L++AGV  V D  +  LR +     +++ + E    V    +G D  +  L+ DYVV+AST  DP      G    +  GLE DE+NGG+VVN   EAV+G++ AG AAS++DP LGR    RR+  +DH VNSGL AG NMA +L  A                               + Y H P +RS+L   GV++EG+G+VD SLRT+GVW+            R   Y RGVVYY++ +K
Sbjct:   78 TAANAAIEAIRQEDASADILVLSDENALPRLDYGSQQPDDEET-----EADEPPLAPALLESYNEWRRHLSARFE-----------------DDAASSVGPPPLTLLLDK---------RPLEFDVEKNRV---LLGDGTEVRYERCLVASAGRPRHFY-------------------------------------------------------VLDSDRVS--------YALKDRVNTCTTRADFVRLDQLAAGGSEEGGGNVQSVLVIGAGFLGCEVACALATDPRNDHIKTQLVFVEQAPAARSLPPYLAEELGRRLSRAGVDVVPDRLVTSLRPS-----MDDDDNESDSGVTVGVLGKDKPEAALDADYVVLASTHTDPSPTLRMGRATRAGGGLERDEKNGGLVVNAQLEAVSGLFVAGNAASYYDPYLGR----RRVDRYDHAVNSGLTAGRNMARSLHGAGKM----------------------------KTYRHQPLFRSHLPGVGVLIEGIGEVDSSLRTVGVWVQPPNVGAGSNGGRGMPYERGVVYYLKGNK 508
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BLAST of Ec-28_000480.1 vs. uniprot
Match: H3GYI8_PHYRM (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=H3GYI8_PHYRM)

HSP 1 Score: 207 bits (526), Expect = 3.900e-54
Identity = 180/556 (32.37%), Postives = 246/556 (44.24%), Query Frame = 2 
Query:  920 TTADAAMESILRMRPEAEILCLSDETPCPADD----SDTHTGSYEADFRLLKTDLVASFNQWRRHLAFRKEGFANGXXXXXXXXXXTGDSRGADGGEGRWAYGLSKGKEIRYHTYEPHDLIIEPERRCVRLLLDGTEVYYDKCLIANAGKPRDFALGGXXXXXXXXXXXXXXXXXXXXPRGSGRRLXXXXRAKKAGDNGGRRGRSDKPLGIPEREAVGGGXXXXXXGSWRSRINKLTCLRDFVSLELLANDPSVKH-VSVLGGGFLGCQVALALAERGRATGVAISQVYSERNPMGHVLPDYLAEHLRGELAKAGVAAVADTRLADLRYNSKTKRLEEQEREGAKHV----VGGDDGKVGLETDYVVVASTDVDP------GVEVASDSGLEIDERNGGIVVNGLFEAVNGVYAAGGAASFFDPNLGRGKGRRRIASHDHCVNSGLYAGYNMAATLTAAENDHEPAGSSTPSASXXXXXRRKGPPPAPHPRFYDHVPFWRSNLAACGVVMEGLGDVDPSLRTMGVWLD-----YGEDN-RKASYRRGVVYYMRDDK 2524
            T A+AA+E+I +    A+IL LSDE   P  D    S+      E     L   L+ S+N+WRRHL+ R E  A+                             S G        +   L  + E+  V LL DGTEV Y++CLIA+AG+PR F +                                                SD+                    + + R+N  T   DFV L+ LA      H V V+G GFLGC+VA ALA   R   +    V+ E+ P    LP YLA+ L   L++AGV  V D  +  LR +     +++ + E    V    +G D  +  L+ DYVV+AST  DP      G    +  GLE DE+NGG+VVN   EAV+G++ AG AAS++DP LGR    RR+  +DH VNSGL AG NMA +L  A                               + Y H P +RS+L   GV++EG+G+VD SLRT+GVW+       G +  R   Y RGVVYY++ +K
Sbjct:   61 TAANAAIEAIRQEDASADILVLSDENALPRLDFNAASEPDGDDAEPREEPLAPALLESYNEWRRHLSARFEEDAS----------------------------PSAGPPPLTLLLDKRPLEFDAEKNRV-LLGDGTEVRYERCLIASAGRPRHFYVLD----------------------------------------------SDR-----------------LSYALKDRVNTCTTRADFVRLDQLAAGGGDAHSVLVIGAGFLGCEVACALATDERNDHLKTKLVFVEQAPAARTLPPYLADELGRRLSRAGVEVVPDKLVTSLRPS-----VDDDDNESDSGVTVGVLGKDKPETALDADYVVLASTHTDPAPTLRMGRATRAGGGLERDEKNGGLVVNAQLEAVSGLFVAGNAASYYDPYLGR----RRVDRYDHAVNSGLTAGRNMARSLRGAGKM----------------------------KTYRHQPLFRSHLPGVGVLIEGIGEVDSSLRTVGVWVQPPNIGVGPNGGRGMPYERGVVYYLKGNK 487
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BLAST of Ec-28_000480.1 vs. uniprot
Match: A0A3M6VHG2_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VHG2_9STRA)

HSP 1 Score: 206 bits (524), Expect = 1.030e-53
Identity = 179/560 (31.96%), Postives = 246/560 (43.93%), Query Frame = 2 
Query:  920 TTADAAMESILRMRPEAEILCLSDETPCPADDSDT--------HTGSYEADFRLLKTDLVASFNQWRRHLAFRKEGFANGXXXXXXXXXXTGDSRGADGGEGRWAYGLSKGKEIRYHTYEPHDLIIEPERRCVRLLLDGTEVYYDKCLIANAGKPRDFALGGXXXXXXXXXXXXXXXXXXXXPRGSGRRLXXXXRAKKAGDNGGRRGRSDKPLGIPEREAVGGGXXXXXXGSWRSRINKLTCLRDFVSLELLANDPSVKHVSVLGGGFLGCQVALALAERGRATGVAISQVYSERNPMGHVLPDYLAEHLRGELAKAGVAAVADTRLADLRYNSKTKRLEEQEREGAKHVV-----GGDDGKVGLETDYVVVASTDVDP------GVEVASDSGLEIDERNGGIVVNGLFEAVNGVYAAGGAASFFDPNLGRGKGRRRIASHDHCVNSGLYAGYNMAATLTAAENDHEPAGSSTPSASXXXXXRRKGPPPAPHPRFYDHVPFWRSNLAACGVVMEGLGDVDPSLRTMGVWLD-----YGEDNRKAS-YRRGVVYYMRDDK 2524
            T A+ A+E+I +    A+IL LSDE   P  D  +           S   +   L   L+ S+N+WRRHL+ R E                 +   A  G       L K          P +  +E  R    LL DGTE+ Y++CLIA+AG+PR F +                                                SD+                    + + R+N  T   DFV L+ ++    V+ V V+G GFLGC+VA ALA   R   V    V+ E++P    LP YLAE L   L++AGV  V D  +  LR +     +++ + E    V      G D  +  L+ DYVV+AST  DP      G   ++  GLE DE+NGGIVVN   EAV+G++ AG AAS+FDP LGR    RR+  +DH VNSGL AG NMA +L  A                               + Y H P +RS+L   GV++EG+G+VD SLRT+GVW+       G D  +     RGVVYY++ +K
Sbjct:   75 TAANTAIEAIRQEDASADILVLSDENALPRRDFGSFQVGRTYDENSSDAVEEEALAPALLESYNEWRRHLSARFE-----------------EDTVASTGPAPLTLLLDK---------RPLEFDVEKNRV---LLGDGTEIRYERCLIASAGRPRHFYVLN----------------------------------------------SDR-----------------VSYALKDRVNTCTSRADFVRLDQVSTG-EVRSVLVIGAGFLGCEVACALATDPRNGHVKTKLVFVEQSPAARALPPYLAEELARRLSRAGVEVVPDKLVTSLRPS-----VDDDDNENDSGVTVGVLGGKDKPEAVLDADYVVLASTHTDPAPTLRLGRATSTGGGLERDEKNGGIVVNAQLEAVSGLFVAGNAASYFDPYLGR----RRVDRYDHAVNSGLTAGRNMARSLRGAGKM----------------------------KTYRHQPLFRSHLTGVGVLIEGIGEVDSSLRTVGVWVQPPNIGTGHDGTQGMPCERGVVYYLKGNK 504
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BLAST of Ec-28_000480.1 vs. uniprot
Match: A0A7S2V1H0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1H0_9STRA)

HSP 1 Score: 206 bits (525), Expect = 3.840e-53
Identity = 184/570 (32.28%), Postives = 261/570 (45.79%), Query Frame = 2 
Query:  920 TTADAAMESILRMRPEAEILCLSDETPCPADDSDTHTGSYEADFRLLKTDLVASFNQWRRHLAFRKEGFANGXXXXXXXXXXTGDSRGADGGEGRWAYGLSKGKEIRYHTYEPHDLIIEPERRCVRLLLDGTEVYYDKCLIANAGKPRDFALGGXXXXXXXXXXXXXXXXXXXXPRGSGRRLXXXXRAKKAGDNGGRRGRSDKPLGIPEREAVGGGXXXXXXGSWRSRINKLTCLRDFVSLELLANDPSVKHVSVLGGGFLGCQVALALAERGRATGVAISQVYSERNPMGHVLPDYLAEHLRGELAKAGVAAVADTRLADLRYNSKTKRLEEQEREGA-------KHVVGGDDGKVGLETDYVVVASTDVDPGVEVASDSGLEIDERNGGIVVNGLFEAVNGVYAAGGAASFFDPNLGRGKGRRRIASHDHCVNSGLYAGYNMAATLTAAENDHEPAGSSTPSASXXXXXRRKGPPPAPHPRFYDHVPFWRSNLAACGVVMEGLGDVDPS-LRTMGVWL-------DYGEDN-----------RKAS---------YRRGVVYYMRDDK 2524
            +TA AA+E IL + P A+IL LS E   P  D      +       L +DL +S+N+WRRH+A R E    G          T                L+KG    +H        I  E+R + +  DG E++YD+ L+A  G+PR F +                                   ++K+G                               ++R RIN LT L DF+SLE L  +   KHV+V+GGGFLG +VALALA+R R   + + QV++E  P+   LP YL+ HL   L KAGV AV +  +  L            E EGA       K  + G+D K  +ETDYVV+A+T VDP   +A   GLE+D  N G+VVN   EA+ GVYAAG  AS++D  LGR    RR+   DH +NSG  AG NMA T   +++ H+ A  +    S      +  P P      Y H P  +S++   GV +E +GD++   + T+G+W+        Y  D            R+A+         Y+RG+VYYM+++K
Sbjct:  131 STAQAAVEGILSVDPSADILLLSSEAQMPRIDMRFRRAT-------LGSDLRSSYNEWRRHIAPRLEENGFGGAAALERTPLT--------------VLLAKGV---HH--------INLEKRSITM--DGMEIFYDRLLLAQPGRPRPFYV---------------------------------LDSEKSGY------------------------------TFRDRINTLTKLPDFMSLESLIEEKRAKHVTVVGGGFLGTEVALALAKRARNKSIRVMQVFAEEGPLFTNLPPYLSAHLLRLLEKAGVEAVPEHIVTGL-----------VESEGAWGDYEPLKLALMGEDRKE-VETDYVVLATTHVDPNCALAGAWGLEVDPVNNGVVVNANLEALGGVYAAGSNASYYDLALGR----RRVDRFDHSINSGFLAGKNMARTAHHSQHLHQ-APQADSIGSKAEVHHKVNPFPGKQ-EMYIHQPQLKSSMTDIGVEVEVVGDINSQQMETVGLWVVKDVSARSYEVDQDPSESASQPLVRRATRRKSMESMYYQRGIVYYMKNNK 585
The following BLAST results are available for this feature:
BLAST of Ec-28_000480.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G9D2_ECTSI0.000e+098.21Pyr_redox_2 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5L4I6_9PHAE0.000e+063.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C7T6_9STRA4.300e-7437.59Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CMS1_9STRA2.200e-6233.33Putative apoptosis-inducing factor 1 n=1 Tax=Tribo... [more]
K3WXL9_GLOUD7.230e-5931.57Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A484E599_BRELC8.740e-5732.38Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
D0P394_PHYIT2.580e-5532.39Apoptosis-inducing factor 1, putative n=15 Tax=Phy... [more]
H3GYI8_PHYRM3.900e-5432.37Uncharacterized protein n=6 Tax=Phytophthora TaxID... [more]
A0A3M6VHG2_9STRA1.030e-5331.96Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A7S2V1H0_9STRA3.840e-5332.28Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:483771..496289 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1219.9
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7G9D2
Preferred nameAIFM1
Length2627
KEGG rclassRC00176
KEGG koko:K04727,ko:K17877
KEGG ReactionR00787,R00789
KEGG Pathwayko00910,ko01120,ko04210,ko04214,ko04217,map00910,map01120,map04210,map04214,map04217
KEGG ModuleM00531
Hectar predicted targeting categorymitochondrion
Gene idEc-28_000480.1
GOsGO:0000166,GO:0000302,GO:0000737,GO:0001101,GO:0002931,GO:0003254,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004174,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005743,GO:0005758,GO:0005829,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006259,GO:0006308,GO:0006309,GO:0006323,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006919,GO:0006921,GO:0006950,GO:0006952,GO:0006979,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0007275,GO:0007399,GO:0007584,GO:0008150,GO:0008152,GO:0008219,GO:0008637,GO:0009055,GO:0009056,GO:0009057,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009605,GO:0009607,GO:0009620,GO:0009628,GO:0009636,GO:0009719,GO:0009725,GO:0009893,GO:0009894,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010243,GO:0010257,GO:0010604,GO:0010623,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0012501,GO:0014070,GO:0015980,GO:0016020,GO:0016043,GO:0016174,GO:0016310,GO:0016491,GO:0016645,GO:0016649,GO:0016651,GO:0017144,GO:0019219,GO:0019222,GO:0019439,GO:0019637,GO:0019693,GO:0019866,GO:0019867,GO:0019899,GO:0022008,GO:0022411,GO:0022607,GO:0022900,GO:0022904,GO:0023052,GO:0030154,GO:0030162,GO:0030182,GO:0030261,GO:0030262,GO:0031090,GO:0031323,GO:0031325,GO:0031329,GO:0031667,GO:0031668,GO:0031669,GO:0031960,GO:0031966,GO:0031967,GO:0031968,GO:0031970,GO:0031974,GO:0031975,GO:0032268,GO:0032270,GO:0032355,GO:0032368,GO:0032370,GO:0032409,GO:0032411,GO:0032501,GO:0032502,GO:0032870,GO:0032879,GO:0032981,GO:0033108,GO:0033554,GO:0033993,GO:0034599,GO:0034614,GO:0034622,GO:0034641,GO:0034655,GO:0034976,GO:0035556,GO:0035690,GO:0036094,GO:0036293,GO:0036294,GO:0042221,GO:0042391,GO:0042493,GO:0042542,GO:0042592,GO:0042773,GO:0042775,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043085,GO:0043167,GO:0043168,GO:0043170,GO:0043200,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043269,GO:0043270,GO:0043280,GO:0043281,GO:0043523,GO:0043525,GO:0043933,GO:0044070,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045333,GO:0045862,GO:0046034,GO:0046483,GO:0046677,GO:0046700,GO:0048037,GO:0048468,GO:0048471,GO:0048518,GO:0048522,GO:0048545,GO:0048583,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048878,GO:0050660,GO:0050662,GO:0050664,GO:0050789,GO:0050790,GO:0050794,GO:0050801,GO:0050832,GO:0050896,GO:0051049,GO:0051050,GO:0051052,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051276,GO:0051336,GO:0051345,GO:0051385,GO:0051402,GO:0051704,GO:0051707,GO:0051716,GO:0051881,GO:0051900,GO:0052547,GO:0052548,GO:0055086,GO:0055114,GO:0060255,GO:0061024,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070059,GO:0070301,GO:0070482,GO:0070887,GO:0070997,GO:0071103,GO:0071236,GO:0071241,GO:0071310,GO:0071383,GO:0071384,GO:0071389,GO:0071392,GO:0071396,GO:0071407,GO:0071453,GO:0071495,GO:0071496,GO:0071704,GO:0071731,GO:0071732,GO:0071840,GO:0071949,GO:0072521,GO:0080090,GO:0080134,GO:0090304,GO:0090305,GO:0090649,GO:0090650,GO:0097035,GO:0097159,GO:0097190,GO:0097193,GO:0097194,GO:0097237,GO:0097305,GO:0097306,GO:0097366,GO:0098542,GO:0098588,GO:0098805,GO:0110096,GO:1900117,GO:1900119,GO:1900161,GO:1900163,GO:1901135,GO:1901214,GO:1901216,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901575,GO:1901654,GO:1901655,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902065,GO:1902170,GO:1902510,GO:1902882,GO:1903624,GO:1903729,GO:1903793,GO:1904044,GO:1904045,GO:1905780,GO:1905782,GO:1905952,GO:1905954,GO:2000116,GO:2001056,GO:2001138,GO:2001140
EggNOG free text desc.apoptosis-inducing factor
EggNOG OGsCOG0446@1,KOG1346@2759
EC1.7.1.4
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_000480Ec-28_000480Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_28 483771..496289 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000480.1Ec-28_000480.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_28 483771..496173 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000480.1.14Ec-28_000480.1.14Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 483771..483872 -
Ec-28_000480.1.13Ec-28_000480.1.13Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 483993..484086 -
Ec-28_000480.1.12Ec-28_000480.1.12Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 484703..484810 -
Ec-28_000480.1.11Ec-28_000480.1.11Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 485681..485783 -
Ec-28_000480.1.10Ec-28_000480.1.10Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 486831..486990 -
Ec-28_000480.1.9Ec-28_000480.1.9Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 487727..487898 -
Ec-28_000480.1.8Ec-28_000480.1.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 488495..488616 -
Ec-28_000480.1.7Ec-28_000480.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 489140..489250 -
Ec-28_000480.1.6Ec-28_000480.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 490568..490869 -
Ec-28_000480.1.5Ec-28_000480.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 491823..491919 -
Ec-28_000480.1.4Ec-28_000480.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 492817..493074 -
Ec-28_000480.1.3Ec-28_000480.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 493389..493846 -
Ec-28_000480.1.2Ec-28_000480.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 494393..494574 -
Ec-28_000480.1.1Ec-28_000480.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 495932..496289 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000480.1CDS:Ec-28_000480.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_28 483771..483872 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0004805UTR:Ec-28_000480.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_28 496174..496289 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-28_000480.1 ID=Ec-28_000480.1|Name=Ec-28_000480.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=837bp
MLAVVVPGAQRVLARQAGHSQRPLGVIGRCRDCAEYPRKVPRSSLTAAAA
GGEARCRAKDYGPWSTGGTMRRLSLRPESSRSDNPSSTLGLGVGAILAMG
GLLLATQGLPDDGNPAAMEAEGGRGGRHGGDDYHTSLASRTGSAAAPDSE
QHSPEETDENSTISPPPAAPAAPPDPEPDSGGGGGGSGGGAPPNGDGGGG
EAEEFPAEGSYRFYILTPEEAAAEGTSALDGFAGGWDGYEDDEDDDEDDD
RGGRRLKERYHFVVIGGGTTADAAMESILRMRPEAEILCLSDETPCPADD
SDTHTGSYEADFRLLKTDLVASFNQWRRHLAFRKEGFANGGGGGGGGGTT
TGDSRGADGGEGRWAYGLSKGKEIRYHTYEPHDLIIEPERRCVRLLLDGT
EVYYDKCLIANAGKPRDFALGGGGGGGGGGDDGDGTSEEEHAPRGSGRRL
RRRERAKKAGDNGGRRGRSDKPLGIPEREAVGGGGSGSGGGSWRSRINKL
TCLRDFVSLELLANDPSVKHVSVLGGGFLGCQVALALAERGRATGVAISQ
VYSERNPMGHVLPDYLAEHLRGELAKAGVAAVADTRLADLRYNSKTKRLE
EQEREGAKHVVGGDDGKVGLETDYVVVASTDVDPGVEVASDSGLEIDERN
GGIVVNGLFEAVNGVYAAGGAASFFDPNLGRGKGRRRIASHDHCVNSGLY
AGYNMAATLTAAENDHEPAGSSTPSASPSASPRRKGPPPAPHPRFYDHVP
FWRSNLAACGVVMEGLGDVDPSLRTMGVWLDYGEDNRKASYRRGVVYYMR
DDKGRKVPRNMALQFTIYGTELGAILKTHRVLYLLA*
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spliced messenger RNA

>Ec-28_000480.1 ID=Ec-28_000480.1|Name=Ec-28_000480.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2627bp|location=Sequence derived from alignment at chr_28:483771..496289- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
CCTTGATCGCATTTGCGGGAACCCCTGAACATGAAGGTTGTGTGTTGTGT
GGGAAGCTCTGCTGCTGGGGAACCCACCTGCCTGTTGTACAACGTCACGG
ACACGAAGAGAGAGCCATGCTAGCAGTGGTGGTTCCAGGTGCCCAGCGAG
TGCTCGCCCGCCAGGCTGGTCACAGCCAGAGGCCCTTGGGTGTGATCGGT
AGGTGTAGAGATTGCGCAGAGTATCCTCGAAAGGTGCCGAGGTCGTCGTT
GACAGCGGCAGCAGCGGGAGGAGAGGCTCGCTGTCGTGCAAAAGATTATG
GGCCATGGTCGACTGGAGGGACAATGAGGAGGCTCTCTCTGCGCCCTGAA
TCCTCGAGGTCCGACAACCCTTCGTCAACGTTGGGGCTGGGAGTCGGAGC
CATCCTGGCGATGGGGGGGTTGCTCCTCGCCACCCAAGGCCTCCCCGACG
ACGGAAACCCTGCGGCGATGGAGGCGGAAGGGGGAAGGGGCGGACGTCAT
GGCGGCGACGACTATCACACCAGCCTTGCCAGTAGGACAGGTAGCGCTGC
TGCTCCCGATAGCGAGCAACACTCACCAGAGGAGACGGACGAGAACAGCA
CCATCTCGCCGCCACCGGCGGCGCCAGCAGCACCACCGGACCCAGAGCCG
GACAGCGGCGGTGGCGGCGGCGGCAGCGGGGGGGGGGCTCCGCCCAACGG
CGACGGGGGTGGGGGGGAGGCGGAGGAGTTCCCCGCCGAAGGGAGTTACA
GGTTTTACATCCTAACCCCGGAGGAGGCGGCGGCGGAGGGAACGTCTGCC
TTGGACGGTTTCGCGGGGGGGTGGGACGGCTACGAGGACGACGAAGACGA
CGACGAAGACGACGACAGAGGCGGCCGTCGGTTGAAGGAGCGGTACCACT
TCGTGGTGATCGGTGGCGGCACCACGGCGGACGCGGCGATGGAGTCTATA
TTGAGGATGCGGCCGGAGGCGGAGATCCTGTGCCTCAGCGACGAAACGCC
GTGCCCTGCGGACGACAGCGACACGCACACCGGTTCCTACGAGGCAGACT
TTCGACTCCTCAAGACGGACCTAGTGGCGTCCTTCAACCAGTGGCGAAGA
CACCTCGCCTTCCGAAAAGAGGGTTTTGCTAACGGCGGCGGCGGCGGCGG
CGGCGGCGGGACCACCACCGGGGACAGCAGGGGGGCGGACGGCGGGGAGG
GGAGGTGGGCCTACGGGCTGTCCAAGGGCAAGGAGATACGGTATCACACC
TACGAGCCGCACGATCTGATCATCGAACCCGAACGGCGATGCGTGCGACT
GTTGCTGGACGGGACGGAGGTGTACTACGACAAGTGCCTCATCGCCAACG
CAGGGAAACCGCGGGATTTCGCTCTCGGCGGCGGCGGCGGCGGCGGCGGC
GGCGGCGACGACGGCGACGGCACGAGCGAGGAGGAACACGCACCGCGAGG
CAGCGGCAGAAGGCTCCGGCGGAGGGAACGGGCGAAAAAGGCCGGAGATA
ACGGGGGGAGGCGGGGGCGGTCGGACAAGCCGCTGGGGATCCCTGAGAGG
GAGGCCGTCGGCGGTGGGGGTAGCGGCAGCGGCGGCGGAAGCTGGCGGAG
CAGGATTAACAAGCTGACGTGCCTTCGAGACTTCGTGTCTCTGGAGCTCC
TCGCGAACGACCCGTCCGTCAAGCACGTTTCTGTCCTCGGGGGAGGGTTT
CTAGGGTGCCAGGTGGCGTTGGCGCTGGCGGAGCGAGGCCGGGCGACGGG
GGTGGCCATCTCCCAGGTCTATTCAGAGAGAAATCCCATGGGGCACGTGC
TGCCCGACTACCTGGCCGAACACCTGCGGGGGGAGCTCGCCAAGGCCGGG
GTAGCTGCCGTGGCCGACACTCGTCTAGCAGACTTGAGGTACAACTCGAA
AACAAAACGCTTGGAAGAACAAGAACGAGAAGGCGCGAAGCACGTCGTAG
GCGGAGACGACGGGAAGGTGGGCCTGGAAACGGACTACGTCGTGGTGGCT
TCCACTGACGTGGACCCTGGTGTCGAAGTGGCCAGCGACAGCGGTCTCGA
GATCGACGAGAGAAATGGCGGGATCGTGGTGAACGGGTTGTTCGAGGCCG
TCAACGGGGTCTACGCGGCCGGTGGTGCGGCGTCGTTCTTCGACCCCAAC
CTGGGGAGGGGGAAGGGGAGGCGGCGCATCGCGAGCCACGACCATTGCGT
CAACTCGGGGCTCTACGCGGGGTACAACATGGCCGCGACCCTAACGGCTG
CCGAGAACGACCACGAGCCCGCGGGTTCGTCGACGCCGTCAGCGTCGCCG
TCGGCATCGCCACGGAGAAAGGGGCCTCCCCCCGCCCCGCACCCTCGTTT
CTACGACCACGTTCCGTTCTGGCGGTCTAACTTGGCGGCATGCGGCGTCG
TCATGGAGGGGTTAGGGGACGTAGATCCGAGCTTGCGAACGATGGGCGTG
TGGTTGGACTACGGGGAGGACAATCGGAAAGCCAGCTACAGAAGGGGGGT
CGTCTACTACATGCGGGATGACAAGGGTCGAAAGGTCCCCAGGAACATGG
CTCTTCAGTTTACTATTTATGGTACAGAGCTTGGGGCGATTCTTAAAACA
CACCGTGTTCTATATCTGCTGGCCTGA
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protein sequence of Ec-28_000480.1

>Ec-28_000480.1 ID=Ec-28_000480.1|Name=Ec-28_000480.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=837bp
MLAVVVPGAQRVLARQAGHSQRPLGVIGRCRDCAEYPRKVPRSSLTAAAA
GGEARCRAKDYGPWSTGGTMRRLSLRPESSRSDNPSSTLGLGVGAILAMG
GLLLATQGLPDDGNPAAMEAEGGRGGRHGGDDYHTSLASRTGSAAAPDSE
QHSPEETDENSTISPPPAAPAAPPDPEPDSGGGGGGSGGGAPPNGDGGGG
EAEEFPAEGSYRFYILTPEEAAAEGTSALDGFAGGWDGYEDDEDDDEDDD
RGGRRLKERYHFVVIGGGTTADAAMESILRMRPEAEILCLSDETPCPADD
SDTHTGSYEADFRLLKTDLVASFNQWRRHLAFRKEGFANGGGGGGGGGTT
TGDSRGADGGEGRWAYGLSKGKEIRYHTYEPHDLIIEPERRCVRLLLDGT
EVYYDKCLIANAGKPRDFALGGGGGGGGGGDDGDGTSEEEHAPRGSGRRL
RRRERAKKAGDNGGRRGRSDKPLGIPEREAVGGGGSGSGGGSWRSRINKL
TCLRDFVSLELLANDPSVKHVSVLGGGFLGCQVALALAERGRATGVAISQ
VYSERNPMGHVLPDYLAEHLRGELAKAGVAAVADTRLADLRYNSKTKRLE
EQEREGAKHVVGGDDGKVGLETDYVVVASTDVDPGVEVASDSGLEIDERN
GGIVVNGLFEAVNGVYAAGGAASFFDPNLGRGKGRRRIASHDHCVNSGLY
AGYNMAATLTAAENDHEPAGSSTPSASPSASPRRKGPPPAPHPRFYDHVP
FWRSNLAACGVVMEGLGDVDPSLRTMGVWLDYGEDNRKASYRRGVVYYMR
DDKGRKVPRNMALQFTIYGTELGAILKTHRVLYLLA*
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mRNA from alignment at chr_28:483771..496289-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-28_000480.1 ID=Ec-28_000480.1|Name=Ec-28_000480.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=12519bp|location=Sequence derived from alignment at chr_28:483771..496289- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CCTTGATCGCATTTGCGGGAACCCCTGAACATGAAGGTTGTGTGTTGTGT
GGGAAGCTCTGCTGCTGGGGAACCCACCTGCCTGTTGTACAACGTCACGG
ACACGAAGAGAGAGCCATGCTAGCAGTGGTGGTTCCAGGTGCCCAGCGAG
TGCTCGCCCGCCAGGCTGGTCACAGCCAGAGGCCCTTGGGTGTGATCGGT
AGGTGTAGAGATTGCGCAGAGTATCCTCGAAAGGTGCCGAGGTCGTCGTT
GACAGCGGCAGCAGCGGGAGGAGAGGCTCGCTGTCGTGCAAAAGATTATG
GGCCATGGTCGACTGGAGGGACAATGAGGAGGCTCTCTCTGCGCCCTGAA
TCCTCGAGGTAAGCGCGACCTCCGCTCTTTGTTGTGGAGAGAGGTGGGAG
ATCTTACGTACACCAGCACATATTTGCGGCTCCTTTGGTTGGCACAACAC
ACACCCGAACGGTTTGTTCGAGCCAGGAGGGTCCTGCATAGTCTAGGCTA
CTGCTCCGCGGGTAGCCGGCTGGCGATGATTGGCGCTTGCATACTTACTG
TACAAAGCTTCGTGTCGCCGTTGTTGATCCTCGTTCGCGGTCGTCTGTTC
ATTCATTGTGCGGCAGTACTTTGTTCATGGTAAGCAACGTTGAAGTACGT
ACATGGGTTATGCTGTGTGCATTTTGTAATGCACACAGCTTCCAAAGTTT
ACTCACAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAAAGATCTACCTG
TGGATTCGTTCGTTGTTTAGATCGTTGCCGACAACAACAGCCTCGTCTAC
ATCATTGCCAACGCATCTCTGCTTGCTCTCCTCGAATGTCCTCTCTCCGG
TCTGTGTGGTGTCGAACAAAGAGTGGTACTTACGGCAACACTCCTCTTGT
TGATGGTGTTCCGGCGGAATTCTGCTTGCACAAAATGCTTACACGAAGGT
GCAAAGAAAACGCTTTGTTTCGTGTTCCCTCCCCGCAGGCGAGGTTCTCC
CGAACTTCTCCCCCGGAAGTTTAGTAGCCTAATGCGTTTGAAGTGTTTCG
TTTTTCTGCGTCCATTTTGTGCATACGTTTCTTTCATGTCTGGAAAGGTG
TACCCCCAAACCGGGTTGTAATAGTTAGTCTATGAAAGCCGTCCGCGTCA
GTTGGACCAACCAGGGTACATATTTACAAGAATACTAGTAGGATGTAGAA
CGGAACGGTTTTTTATGTGACCAGCAATCTACATGTAGGCATTCACGCAG
TGACATGAGAGTCTTGTCGAGGCGAGAAATATCCCCCCCCCGAATTTTTT
GGTCTTGGACCTCGCCAGCTGGTCGCCGCCCCTCCTCGGTGGCTCCTTTG
GTAACCTGTCGACGCGAATTCGAATCTCGGCGCAGTCGCACGAACTGGGG
TTCTTTTTCTCACGTTATCCCCAGTAACAAGGACGTAAAAGTTCACAAGT
TTTTACCGAAAATCAAGCGAGCGAAATACATCATCCGGTGCGATCGCCTG
TTTTCTCATCGCTTCATTCTTGGGGTATTTTTTTGCACTCTTGATATGCA
CACATAACGCGTACGGGTGCCAGAGGGTCCTGAGCAGAGACCGAAAAAGT
CTTGAATGTGAAGGCAACAACGACGACGACGACAACAACAACAACAACAA
CAGCAGCAGCAGCAGCAGCAGCAGCAACAACCTCCATCACGCCCTTGCTC
GCTTGACGCACACAGGTCCGACAACCCTTCGTCAACGTTGGGGCTGGGAG
TCGGAGCCATCCTGGCGATGGGGGGGTTGCTCCTCGCCACCCAAGGCCTC
CCCGACGACGGAAACCCTGCGGCGATGGAGGCGGAAGGGGGAAGGGGCGG
ACGTCATGGCGGCGACGACTATCACACCAGCCTTGCCAGTAGGACAGGTG
AATGCCCGCGAATGCCTGCCTCCGTGTGTTGGTGAGACTTGGGTGAAAGG
AGGAGGAGGTGGTGGTGGAGGAGGAGGAGGAGGCAAGCGCCGCTCAGGCC
ATGGGTGGCTGACGCCTTGGAGGGTAGCACTGTTGTCTGGCGGGGTGTCG
GTTTGGCTGTGCAGGTTGAGGGCTGTGCGTCGAATGAAGGTGTTGGTGAG
GCTGTGTTGTTTGTATTTCTCGGTGAAGGTGAACCTTGCACGGTACACAC
GAACGAAGACGGTCACGTTCGGCGGCCAGTGTCCTGCCTACCGGTGTAGC
TCAAGAGTGCGAGCGCCCCGACCGCTGAAAGGGGTCTCGTCACTTTCCGT
TTCTCTTTTCTTCGATTGGACAAAGCTTGTGTGCTTGTGGAGATAAACCC
AAGGATAATAACCACCAAGCCGACAGCACTACCACAACAGCAAACAACCA
ACCGCATCCACTGGAAACGAAACAACGACAACGACAACACCACCACAACG
ACAGCAAGACGAGCAACCACATCGACGGAACCAAACGCCACAGGTAGCGC
TGCTGCTCCCGATAGCGAGCAACACTCACCAGAGGAGACGGACGAGAACA
GCACCATCTCGCCGCCACCGGCGGCGCCAGCAGCACCACCGGACCCAGAG
CCGGACAGCGGCGGTGGCGGCGGCGGCAGCGGGGGGGGGGCTCCGCCCAA
CGGCGACGGGGGTGGGGGGGAGGCGGAGGAGTTCCCCGCCGAAGGGAGTT
ACAGGTTTTACATCCTAACCCCGGAGGAGGCGGCGGCGGAGGGAACGTCT
GCCTTGGACGGTTTCGCGGGGGGGTGGGACGGCTACGAGGACGACGAAGA
CGACGACGAAGACGACGACAGAGGCGGCCGTCGGTTGAAGGAGCGGTACC
ACTTCGTGGTGATCGGTGGCGGCACCACGGCGGACGCGGCGATGGAGTCT
ATATTGAGGATGCGGCCGGAGGCGGAGATCCTGTGCCTCAGCGACGAAAC
GGTGAGGCCGGCGGCGGCGGCGGCGGAGGCGGTGTTCTGTGGTGTGCTGT
GTGTGCACCCCTCAGTGTTTGCCTTGCTGTGTTTTTTTGTTCCGCGCTTC
CCGTTGTATGTTGGGGTCTCATATTTTTGCTCGTTGATATTGCTTGGTTT
CTTTCGTTTGTCCTCGTTTAGAGGCTGGTTTTGTCCTCTTCGTTGGCCAG
CCGCCTTCAGTACATACATAGCATGGTCGATTCTCACCCTTGACCCTTAT
CGTCTCCCTCTCCCTCTCCCTCTCTCTCATCTCACCCGCGTGGCTTGCGG
TGGTGGGCGCGGCAGCCGTGCCCTGCGGACGACAGCGACACGCACACCGG
TTCCTACGAGGCAGACTTTCGACTCCTCAAGACGGACCTAGTGGCGTCCT
TCAACCAGTGGCGAAGACACCTCGCCTTCCGAAAAGAGGGTTTTGCTAAC
GGCGGCGGCGGCGGCGGCGGCGGCGGGACCACCACCGGGGACAGCAGGGG
GGCGGACGGCGGGGAGGGGAGGTGGGCCTACGGGCTGTCCAAGGGCAAGG
AGATACGGTATCACACCTACGAGGTCGGTGCCAATCTGTGTTGTGCTATG
CATACATACACCGTGTGTTTTGCGCTATTGTGTCTTTATGTGCGCCTCTT
GTTTTGTTCACTTGTAAGTGTTCTTTGTTTTGTGTTGCCGTGTAGTATAC
CATCTCCTTCGCCGGCTGGGTCTAGAAGTCTAGAACGGCCATTGTGTACA
TGACCGAGCATGAGTTCGACACAGCGGTATCTAGCAATGCGCGCCTTTTC
TGAGTCCTTCTTTAGGATTGCAAGGGTGTTTTCGTGCGAGGAAATCTGGT
CACTCGAGGACGAACGCACCGAGTTGTCGTCGTTTTTTGTTTTTTCCCGT
TTCGCCCTCAAACGCTTGCACGGTCTCGGGGGGGCCGAGTCGACCAATCG
GCCGAACCCGCACCCTCTTGTGACGCTGCGGTTACCGCGGCACAGCAGCC
CCTTGTGCAGAGGAACGAGGGCATGTACCGCCGTCTCTTTCGAAAACGTT
CAACACAGCAGCCTACAGAGGAGGGCATGCACCGTCTTTTGTTCGAAAAT
GTTGAGCACAGTAGCTCCTTGTAGGAAGGGGGGCATGTTCCGTCTCTCTT
TCGAAATATTTCGAGTTCCCTTTGTTGGGGCGGGGTTTCGCGCTCGAGCG
GTCGGTCGTTTCTTCCGCGCCGATGCTGCGTGACGATGCTCCCCTTGCTA
GCCGTATCGTAGCCTAGCCGTTCGTTTACAACGATCTTCCCGGTACCAGC
CGTATCGTAGCCTGTTAGTCGTTCGTTTCCAACGATGTCCCCTTGCTAGC
CGTATCGTAGCCTAGCCGTTCGTTTCCAACGACCTTCCCGTGGCTAGCCG
TAGGCTTGACCTTAGCCCTGACTGGTAGCGTGCCCATTTCCCCCTCCTCC
TCCTCTCCGGGGGAGCGCAGCCGCACGATCTGATCATCGAACCCGAACGG
CGATGCGTGCGACTGTTGCTGGACGGGACGGAGGTGTACTACGACAAGTG
CCTCATCGCCAACGCAGGTGCGAGATGCGAGCGGAGGTATTGTAGACGGA
GCGGGGGGAATGGTAGGGGTTGGGTGGAGTTTGGGTGCTAACCCTAGCTA
GAGGGGACGTCCTGATGGGTAACCCAAGCCCATATGGCACCATCATCCAG
ACCCCCTGGGTCCTCTTTCAGAAGACCTTGTGGCTGTGCCCTTCGCTTGG
AGTAGTCTGTCATGTAGAGGGTTCACCGTAAAAAATAGGTGCCGCTTTTT
TGTGTTTTTTTTTCTCCTCCGTGCACCGTTTCCATCGGCCATATCTGCCG
GGACAGGGAGGTGTGCTGCCGCTACTTTGACACCTCCGTGTTTGACGAAC
GTACAGCCAGCCAGCCAGTAATTAAGGAGCAGCCGTGCCAGCCATGCCGA
TGCTTCTGCTCGTGCCTTGCCCGGCCGCCCTCGCCTCTTTTTAGGAAGGA
AGGAGGCCTCCCCTCCTGTTTCCCGTCATCTCTCTCGCACGAGACGGCCC
GCCCTCGTTTTCACCGTTTCCCCATCCGGTCTTGCTTTCGCTACAAGCGG
GGGGCAGCAAAACCAGTCAGTTGTTGCCGAGCAAGTACATGCCCTCTCCC
TCTGGCATAAAAACGAAGGCACGCAAAGCAAGTATGAGTACGCGCCTCGC
CACCTTTTTTTTCTCGTGTCCTGTTTTGAGATATTTCTTTTGCGCTGGTG
TGTGGCGGAAAAAAGTTAGCTGTTGCGGAATCAAATATAAATACCCCCCC
CCCCATTGGGCTAACACCTAAGACACAAAAAACAAAGACGAGTATGTACC
CCCCCCCCACCCCTTTTTATTGGTGTCCTGTTCTGACACCGAGCGTGGAA
CAAGCTGACGTCAACCGACACGCTATTTTTTTTTGTTATTTTTTTGTTTC
CGCTTCTTATTATTTTTTATTTTTTTGTTTCGCTTTTTCTCTTCTTTATT
GTTCGGTTCCACCGCCGCAGGGAAACCGCGGGATTTCGCTCTCGGCGGCG
GCGGCGGCGGCGGCGGCGGCGGCGACGACGGCGACGGCACGAGCGAGGAG
GAACACGCACCGCGAGGCAGCGGCAGAAGGCTCCGGCGGAGGGAACGGGC
GAAAAAGGCCGGAGATAACGGGGGGAGGCGGGGGCGGTCGGACAAGCCGC
TGGGGATCCCTGAGAGGGAGGCCGTCGGCGGTGGGGGTAGCGGCAGCGGC
GGCGGAAGCTGGCGGAGCAGGATTAACAAGCTGACGTGCCTTCGAGACTT
CGTGTCTCTGGAGCTCCTCGCGGTGCGTGCGTGCGTGCGTATATATTTAT
TCTCGTCGGCCTTCTCGTCTTGTCGGATGGCTACATTTAGATATCGAACA
CACACAAAGCGTGCGTGCGTTTTTTTGCTCCTCGTCCTTTGCCGAAATAA
TCGGCTGGCTACGTTGTGATAGCTCGCACAAAGCTTGCGTGCGTTTTTTT
TGCTCCTCGTCCTTGCTCACGATGGTATCGGCTGGCTACATACATGGGTA
ACACCCAAAACAAAGCGTGCTAGAATTCGAGGACTTACAATATGATGACT
CTGTTCATTACGAGATTGTACACTCTTGTGTTGTGCACCGTACCCCACAG
CAGTCCAACTTGTCGGCAGCATTTGCAGGGGTGCCTTTTTGGCGGTCCCA
GGGAGGTAGTAGAATTGTCCCTGGCCCGCCGGAAGGAAGATGTTGTTAGG
AAAAGGAGCCCGCAGCTTTGTCTGTACCGTCAGTGCCGCATGTGCGGACC
ACGTTAAAATCGGTCCTGAAACCATTCCTCGAGACAACAATAAAGCCAGC
CAGCGACCCGTGAGGGCCGCGTAGAGGATGAGTGCGATGGAGCTGCTCGT
GAGCGGCAAGAGAGGGCTTGCATTGTTGCTCCTACCTAATATTGGGAGCT
GACCCAATAACCGGGTTTGCATGGAAGATATTTGCAATTTCGCTTCCATG
GCTGGCATCACTGAATTCTCAACGCCCGAAGGCAGTTGTCCGGCACGCCG
CTGCACAGGACGAAAGTAGATTCATTCGAAAGCTCTTTAAAGCAGCGTTC
ATTCAATATGTAGCACGTTTTGTGAATCGACAGGTGCAGGAGATATCATT
CAAGTTGTGCGTACCGGGACCCTTGAGCAATACCAATGTAGGCCTGCTTC
TGTATGCTTTTTTTGCGTCTAAAAAGCGAATATTTCAGATGGATCCTACC
GAAGGGGGGAGGAGTCTGAAATTGGGGTTTATTGGAGTTGGTAGAAGAAG
TGGGCATTTATATTATATGGCAAAGAGTATGTCTGCGTGCTTGCAGGAGA
GGAGGCATGCGCGCCGAGATAAGGCAGCTGCTCGCAGGACATTCCGTTTG
CGCCCGATCACGTTGAAGCATCAGCAGTGCTGGAGCACAGGGACTGCTAG
ACGTACGATTGGGCAACACTGCCAGCTGCTGGTTTAGGACATTCTGTTCC
GGGAGCTAGTGTTGTCTGTATGTTTTTTTTGCGTCTAAAAAGCTGACGAT
ATTTTCGAGACTAGTGCTGCTTGTGCTGCTGCTGTTTTGCTCACACCGTG
GGCGACGCTGCTGCCTTCTGCGCGTCCCCTCGCGTGCAGAACGACCCGTC
CGTCAAGCACGTTTCTGTCCTCGGGGGAGGGTTTCTAGGGTGCCAGGTGG
CGTTGGCGCTGGCGGAGCGAGGCCGGGCGACGGGGGTGGCCATCTCCCAG
GCGAGTACTGCTGTACATGTTGTAGAAAGCGAAGAAGAAAGCGACAAACG
GGTGGCGGCACACGCATTACCCTGTTGTTTTGGGTGCTGGCGCGCCCTAC
CCTCTGAATCTCGGGACTTGTGCGGTTTTCTTCTTGAAGGCGTTTTTGCT
TGAAAATGGAGTCGGAGTATGGTCTAGGTGGGAGCAGCAGAGGTGGTGTT
GTTGGCTGTTGCCGGGTGGGCGTGGGCGGGGTGCCACACAATTGCGTCCT
CGCCGGCCACGCCGAGTTCGGCCAGCCAGGTGGTTTTAGTGCAAGGCCAG
TCGAGTTGGGAGGACCATTCACTCGGTTGAACAATACCAGTTGGTTTTAG
TACGGCCAGTCGAGTTAAGACGGCCAGCCAAGCGAGGACAAGCGCACATT
CTCATGCAGTTCTCGAAAATCATCTTGCCTGCCTGCGCGCAAATTTGTCT
TTTACACCAGTGCACCTCTGCTGCTGCTACTGCTGCTGCTGTTGTTGTTT
CTGCCGGTGTTTGTTGAGTTTAGGTCTATTCAGAGAGAAATCCCATGGGG
CACGTGCTGCCCGACTACCTGGCCGAACACCTGCGGGGGGAGCTCGCCAA
GGCCGGGGTAGCTGCCGTGGCCGACACTCGTCTAGCAGACTTGAGGTGCT
CGCTTGTTGGTTCTGTTGCAGATGTCGTGGCGCCTAGTTGTAGAGGGAGG
TGCCGCGTGTGGTGTTTGTTGTTCAGCACCGATATCGAAAGTGTAATTCC
CGAGTCGATAAATAGCAATGACAATGAAAACATGCTTTGTGAGGTATCAT
GGTGCTGTGAATTTTTTCACCATGCACGAGAGGCGAGAAGAAAAGGTGTT
CTCTTGTCACCATCAACAGCAAATGACAGCATGACTTGTCAAGTATGGGC
GGCACAAAAACGCGACTTTCATGTGTAGGGAGTCCATCTATACACACCGC
TGACACTATCGTCAAGTGTAATCACCCTTTGAACGCGTTCAGACATGCAT
ATATATATCTAACCGTAGGTAGCTCAGCATACCACGCCCTTAGTAATAGC
TCGATTACTCCACGAAGAGGATGCCACAGCAGTCCAAACCTGAGTTGTTT
TTGAATTTCCTCGACTAGACGGTTCCAGCGTGGCCATCATCAGCACCGTC
AGTCACTGCTTTTAGCTGCAGAGTACTCGCGCTCTGTGCTCATTTGTTTC
TGTTTTTTTTTTTTTTTTTTGCCCGTGTGTCTGGGGCTCAGGTACAACTC
GAAAACAAAACGCTTGGAAGAACAAGAACGAGAAGGCGCGAAGCACGTCG
TAGGCGGAGACGACGGGAAGGTGGGCCTGGAAACGGACTACGTCGTGGTG
GCTTCCACTGACGTGGACCCTGGTGTCGAAGTGGCCAGCGACAGCGGTCT
CGAGATCGACGAGGTGTGCAGGATGGATGGATTGATGGATGGATGGGGTT
CTCACGTAGGAATTAAATCCGTCTCTCTGTGTTTTTTGTTTGTTGGTTGT
GTCTGTGAGTTTTTAGCCTTGACACTCCCATTATACATAGGCACGCACTA
TTACGACATGTGCTTGAAATGCATTCAACCGTTACCGCATGTACAAGCCA
GGGAAATGTCCTCAAGGTTGATACCCCCCATCCTTATTATGCATGCGAGC
GACCATGCCCGTGAAGAAAGAGTAGTCCTCAACCCAGGGAGTTTCCTTAC
TTTTGGTGTCCTTAAGCGAAGTCACGACTGCTGTACTTGTGGTACTACCA
CGGTACTCCCGATACACCTGTTGCTCCTCCACCGTTGTGTGCCAAAATTT
TTACCGTACATGACACAGGATAACACACACCCCTGGACCGATTTTCGAAT
CTCGATTTCTCAAAAGCAGAAACAGTCACGGCGCCAAAAACGGTGGCTTT
GAAGCTGTCTCGTCGAGAGCTGTCCGAAAATGTATTTTTTTCATTTATGC
ATCCTCTTCGTCGTGGCGTAATCGATGTTTGAAAAATGGTCCAGGGGATG
TGTTATCTCGTGTCATGTGCGGTATCTGCCTTGCCCCGTGGTGTGTGAAG
ATGGGGGTTACGAACGTCGGGCGACGATGCTGATCTGGTATGTAACTGCC
TGTCGCCGGTGTGTTATGTTCCGGTTCGGTCGCGGACGAAAACTTGCAGA
GAAATGGCGGGATCGTGGTGAACGGGTTGTTCGAGGCCGTCAACGGGGTC
TACGCGGCCGGTGGTGCGGCGTCGTTCTTCGACCCCAACCTGGGGAGGGG
GAAGGGGAGGCGGCGCATCGCGAGCCACGACCATTGCGTCAACTCGGGGC
TCTACGCGGGTGAGAGGTTCTTGATTTTGTTTTTGCAATGCGTGCTGTTG
TTGTTGTTGGGTGTCTGTAGGTCAGCGGCCGTTGTAACAGCCTTCCTGCT
CGCTAGAATGTTCGGTCGGTCCGAAAACGTATCCTTTAGCACGGGGACTT
GTTAGTTGCTCTGAGGTTCCCATTGGTATGTAGCAACACCGTGCGCTAGC
CTAGTAGGGGGGGAGGGGGGGGGGGAGGGTGTGCTCATAGTCGTGCATGC
CGTAGTCGTTAGACCATTGAACTCGCATCCCTACATAGCCGGGACGGAGC
ACGCCGGGTTCTCACCGGACCAGACTCACATCACCCAAGCGCGAAGCACC
GTGAGGTATTCGGCAAGTGAGTCGCATGAAGGGGGCGCCGCATCCTGCTA
AGGGTGTAGGGGGGGGCGTTTGCTATCGATCAAGTTGTACCTGCGGAAGA
CGTACGTATGAATGGTGCACGACGAACGTGAGAGTACCCGCAGACAGCAC
GGAGGTGAAGCATGCCTGGCACATAAATAGTTGAACTGAAAGGAGATGTC
ATGGGGTTCATTCAAAACGAGTGTCCACCTGGAAAGGAGACATGATAGGG
ATGCGGACGGTGAAGTTGTGCCATCGACTAACTTGGCAAGACGATCTTTA
CGACGAGCGTGCCGCGTCGTTGTAGCCGCACCGTGGTGAGGAATGTTGTG
GTGGCCTGCCTGCCGCGCAAGTAGTCTGACTGTCTCTTGGTGCCAGGGCG
GGCGGGCGGGCGGGCGGGCTAGCGGGCGGGGGGGGGGGGACGGGTACGCT
GGTTGCTTTCGTTTCAAATCGCGTTGCCGCTGTTTGTTGTGTGCGCCGCT
CCATCAGGCTGGCTGCCTGATGCGCATGCGAATCGTTTGTCGCACGGGAA
AACATAGGTGCGAAACGAAGCGCCCCACCCCGCGCGAACCCCAAGGACAA
CGCAGACGTTCTGTTCTTTCCTATTTTTGTGTCTTTCGTTGTCGGACTTC
GTTGTCGGACTTGTGTGTGATCGATTCGATCGACCTTCTCTGCGATCGAT
CGGCAGGGTACAACATGGCCGCGACCCTAACGGCTGCCGAGAACGACCAC
GAGCCCGCGGGTTCGTCGACGCCGTCAGCGTCGCCGTCGGCATCGCCACG
GAGAAAGGGGTAAGCGGTGTCCTGTGTAAGGCTACTCTGCTCCCTGAGGT
GTTTGCCAGGTGCAGGAAGGATACACACACCCTCGAACACGCGTGCGTGC
CACTGTTGTGTGTTGCGCTTTTTGGCTCCGTTGCCGGAGCTTGCTTTTTG
TGTGCTGCGTCGTTTGCACGATCCCGTCCAACTCGTCCCCACCGGCAGCG
ATTATTTTATTCTTTTTTTGATGCTTTTTTTTTGCAATGAATGTCGGGTT
GGTTACGCACGCGTGGGGAAGCGTAATTTTACCATGTTTTTCTTGTTGAG
TTTTTTGCTCTTCTTCTCCTCCGGAAGGGGTATTTTGGTCACCACTTACC
ACGGTGTGTCCTGTTCTCCAAGTCCATTAAGTCTCCCTTTGTCATGTCCT
CCCTGTCGCCCCCCTTCACGGGGGTCTGTTGTCGCCGCTTACACTTTTTT
TTTTTAGAGAGATCGTGTTTCTGTTGCAAACTGCTGGGGTTTTTTCGAAT
GTCTTTCTTGTTGTGTGTCGCCCGCCCGGTCCAGGCCTTCCCCCGCGCCG
CACCGCAACTGTCCTCTCCGGCAGCGTTTTTTTTTCTTTTTCGTTGCTTT
ATTTCAATGTTTCGGTTGGTTGCACGCGTTCGACAGTCTTGTTTACGCCT
TGTTTTTTCCTGTCCCTTTTTTTTATCACCGCTGACTGAGCGTGCTGTTT
CTCTAAGCCCATCAAGGCTTCCTTTGTCTTCTCCTCTCCTTACCCCTCCC
TTAGAAAAGGTCTGTTGGCCGTTTGACCCATATTTACGTTTTTTTAGTCC
GAGATTCCGTGCGTGTTTCTGTCGCAAATTTCTGATTTTCGGATGTGTTT
TCTTCTTGTGCGTCGCCCGCCCGGTTCAGGCCTCCCCCCGCCCCGCACCC
TCGTTTCTACGACCACGTTCCGTTCTGGCGGTCTAACTTGGCGGCATGCG
GCGTCGTCATGGAGGGGTTAGGGGACGTAGATCCGAGGTGAGCGCGAAAA
AAAATGTTGGAGGCTTTTCCGTTTCTCGGGTCACACGAGGGATGCTGATG
GCATGGGGTGGTGTCTAGAGGGCCTCGGCCCTTGAGTGTTATTTTTTCAG
GAGGCCCGATGGTCCCGGTCGTTAATATACGCCCTCATGACCGCGGGTGA
CGTCACCACTCGACGACGGAATTTTCGACGAAAGGAAAATTCCTCTACAA
AAAATGGACCAATCAGAAAACTGCGGGCACCTTTTCTCTCTCACGATTTT
AATTTTGCCCGGCAACTATGATCATTGTCCGGACACAACTCGCAAAGAGC
GGGTCCAGGCGTCGAGAGACCTGCCGGATCAACGAACACCATCAGCTAGC
GTATGTTGTATGAGAAATGCTTTCGAGTCACACAAGTTTTCTCTTTTCTT
AGTATGACACAACGAATCCATCTCTATCTATTAGCCAAGAGAGAGTAGCA
CTGAATCCATAGCGTATAGTGTTTTTTGAAGTTCTTTTTTTCCTTGTTTT
TGTTTTTTTCCTCCGGCTACGAAGTGTGGTAAATGTATTTATTATAAGGA
GCTCTTTATCCTTTCGCGGCGTGTTGTTTGTTGTTTCGCTCGGGATGATG
CAGCTTGCGAACGATGGGCGTGTGGTTGGACTACGGGGAGGACAATCGGA
AAGCCAGCTACAGAAGGGGGGTCGTCTACTACATGCGGGATGACAAGGTA
AACCTCGACGGTCATGCTGTATGTATTCTACAAGTTTTTTTAGTTTTATT
TGCGGAGAGATTGTTGTTTCGTTTTTGTTTTTCGTGTTTTTGTTTTTTTT
GCGAAAACGTTTGGGAGGGTCGAAAGGTCCCCAGGAACATGGCTCTTCAG
TTTACTATTTATGGTACAGAGCTTGGGGCGATTCTTAAAACACACCGTGT
TCTATATCTGCTGGCCTGA
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Coding sequence (CDS) from alignment at chr_28:483771..496289-

>Ec-28_000480.1 ID=Ec-28_000480.1|Name=Ec-28_000480.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=2511bp|location=Sequence derived from alignment at chr_28:483771..496289- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCTAGCAGTGGTGGTTCCAGGTGCCCAGCGAGTGCTCGCCCGCCAGGC
TGGTCACAGCCAGAGGCCCTTGGGTGTGATCGGTAGGTGTAGAGATTGCG
CAGAGTATCCTCGAAAGGTGCCGAGGTCGTCGTTGACAGCGGCAGCAGCG
GGAGGAGAGGCTCGCTGTCGTGCAAAAGATTATGGGCCATGGTCGACTGG
AGGGACAATGAGGAGGCTCTCTCTGCGCCCTGAATCCTCGAGGTCCGACA
ACCCTTCGTCAACGTTGGGGCTGGGAGTCGGAGCCATCCTGGCGATGGGG
GGGTTGCTCCTCGCCACCCAAGGCCTCCCCGACGACGGAAACCCTGCGGC
GATGGAGGCGGAAGGGGGAAGGGGCGGACGTCATGGCGGCGACGACTATC
ACACCAGCCTTGCCAGTAGGACAGGTAGCGCTGCTGCTCCCGATAGCGAG
CAACACTCACCAGAGGAGACGGACGAGAACAGCACCATCTCGCCGCCACC
GGCGGCGCCAGCAGCACCACCGGACCCAGAGCCGGACAGCGGCGGTGGCG
GCGGCGGCAGCGGGGGGGGGGCTCCGCCCAACGGCGACGGGGGTGGGGGG
GAGGCGGAGGAGTTCCCCGCCGAAGGGAGTTACAGGTTTTACATCCTAAC
CCCGGAGGAGGCGGCGGCGGAGGGAACGTCTGCCTTGGACGGTTTCGCGG
GGGGGTGGGACGGCTACGAGGACGACGAAGACGACGACGAAGACGACGAC
AGAGGCGGCCGTCGGTTGAAGGAGCGGTACCACTTCGTGGTGATCGGTGG
CGGCACCACGGCGGACGCGGCGATGGAGTCTATATTGAGGATGCGGCCGG
AGGCGGAGATCCTGTGCCTCAGCGACGAAACGCCGTGCCCTGCGGACGAC
AGCGACACGCACACCGGTTCCTACGAGGCAGACTTTCGACTCCTCAAGAC
GGACCTAGTGGCGTCCTTCAACCAGTGGCGAAGACACCTCGCCTTCCGAA
AAGAGGGTTTTGCTAACGGCGGCGGCGGCGGCGGCGGCGGCGGGACCACC
ACCGGGGACAGCAGGGGGGCGGACGGCGGGGAGGGGAGGTGGGCCTACGG
GCTGTCCAAGGGCAAGGAGATACGGTATCACACCTACGAGCCGCACGATC
TGATCATCGAACCCGAACGGCGATGCGTGCGACTGTTGCTGGACGGGACG
GAGGTGTACTACGACAAGTGCCTCATCGCCAACGCAGGGAAACCGCGGGA
TTTCGCTCTCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGACGACGGCG
ACGGCACGAGCGAGGAGGAACACGCACCGCGAGGCAGCGGCAGAAGGCTC
CGGCGGAGGGAACGGGCGAAAAAGGCCGGAGATAACGGGGGGAGGCGGGG
GCGGTCGGACAAGCCGCTGGGGATCCCTGAGAGGGAGGCCGTCGGCGGTG
GGGGTAGCGGCAGCGGCGGCGGAAGCTGGCGGAGCAGGATTAACAAGCTG
ACGTGCCTTCGAGACTTCGTGTCTCTGGAGCTCCTCGCGAACGACCCGTC
CGTCAAGCACGTTTCTGTCCTCGGGGGAGGGTTTCTAGGGTGCCAGGTGG
CGTTGGCGCTGGCGGAGCGAGGCCGGGCGACGGGGGTGGCCATCTCCCAG
GTCTATTCAGAGAGAAATCCCATGGGGCACGTGCTGCCCGACTACCTGGC
CGAACACCTGCGGGGGGAGCTCGCCAAGGCCGGGGTAGCTGCCGTGGCCG
ACACTCGTCTAGCAGACTTGAGGTACAACTCGAAAACAAAACGCTTGGAA
GAACAAGAACGAGAAGGCGCGAAGCACGTCGTAGGCGGAGACGACGGGAA
GGTGGGCCTGGAAACGGACTACGTCGTGGTGGCTTCCACTGACGTGGACC
CTGGTGTCGAAGTGGCCAGCGACAGCGGTCTCGAGATCGACGAGAGAAAT
GGCGGGATCGTGGTGAACGGGTTGTTCGAGGCCGTCAACGGGGTCTACGC
GGCCGGTGGTGCGGCGTCGTTCTTCGACCCCAACCTGGGGAGGGGGAAGG
GGAGGCGGCGCATCGCGAGCCACGACCATTGCGTCAACTCGGGGCTCTAC
GCGGGGTACAACATGGCCGCGACCCTAACGGCTGCCGAGAACGACCACGA
GCCCGCGGGTTCGTCGACGCCGTCAGCGTCGCCGTCGGCATCGCCACGGA
GAAAGGGGCCTCCCCCCGCCCCGCACCCTCGTTTCTACGACCACGTTCCG
TTCTGGCGGTCTAACTTGGCGGCATGCGGCGTCGTCATGGAGGGGTTAGG
GGACGTAGATCCGAGCTTGCGAACGATGGGCGTGTGGTTGGACTACGGGG
AGGACAATCGGAAAGCCAGCTACAGAAGGGGGGTCGTCTACTACATGCGG
GATGACAAGGGTCGAAAGGTCCCCAGGAACATGGCTCTTCAGTTTACTAT
TTATGGTACAGAGCTTGGGGCGATTCTTAAAACACACCGTGTTCTATATC
TGCTGGCCTGA
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Synonyms
The feature 'Ec-28_000480.1' has the following synonyms
Synonym
Esi0098_0001
Esi_0098_0001