Ec-28_000440.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-28_000440.1
Unique NameEc-28_000440.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length314
Homology
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BLAST of Ec-28_000440.1 vs. uniprot
Match: D7FII9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FII9_ECTSI)

HSP 1 Score: 604 bits (1558), Expect = 1.190e-214
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 1 
Query:  178 MAPQGNLAAGGLHVLLLLCCCVQWSHGFIAVSPCFRRGCSQQTLSSTNDLHKRESRGSGRHGSLIRRRSGGPGFSLKANEAGGGAEEEDDTLELTKGFYSEIAARLGKTAQGQPQDSQETAKDEDSGSXXXXXXXDELRARRDFGFEQDLGLELEKRNITKEAEAKKIIDAGLEQMPGVTSSATFLPSSELTPREVVTSVLEALKNNDQPYHNHGVEVFIRFLAPSSAMHGVEMSGVARYLAENRNRAFMHWNTMAFPRPLTVSGGAKQNKAFQPVKLRDTMTGAWHSVSVYLTLDARSNCWLIESCIVKGEV 1116
            MAPQGNLAAGGLHVLLLLCCCVQWSHGFIAVSPCFRRGCSQQTLSSTNDLHKRESRGSGRHGSLIRRRSGGPGFSLKANEAGGGAEEEDDTLELTKGFYSEIAARLGKTAQGQPQDSQETAKDEDSGSXXXXXXXDELRARRDFGFEQDLGLELEKRNITKEAEAKKIIDAGLEQMPGVTSSATFLPSSELTPREVVTSVLEALKNNDQPYHNHGVEVFIRFLAPSSAMHGVEMSGVARYLAENRNRAFMHWNTMAFPRPLTVSGGAKQNKAFQPVKLRDTMTGAWHSVSVYLTLDARSNCWLIESCIVKGEV
Sbjct:    1 MAPQGNLAAGGLHVLLLLCCCVQWSHGFIAVSPCFRRGCSQQTLSSTNDLHKRESRGSGRHGSLIRRRSGGPGFSLKANEAGGGAEEEDDTLELTKGFYSEIAARLGKTAQGQPQDSQETAKDEDSGSXXXXXXXDELRARRDFGFEQDLGLELEKRNITKEAEAKKIIDAGLEQMPGVTSSATFLPSSELTPREVVTSVLEALKNNDQPYHNHGVEVFIRFLAPSSAMHGVEMSGVARYLAENRNRAFMHWNTMAFPRPLTVSGGAKQNKAFQPVKLRDTMTGAWHSVSVYLTLDARSNCWLIESCIVKGEV 313
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BLAST of Ec-28_000440.1 vs. uniprot
Match: A0A7S3WL80_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WL80_EMIHU)

HSP 1 Score: 71.2 bits (173), Expect = 4.320e-11
Identity = 43/114 (37.72%), Postives = 65/114 (57.02%), Query Frame = 1 
Query:  736 PSSELTPREVVTSVLEAL--KNNDQPYHNHGVEVFIRFLAPSSA--MHGVEMSGVARYLAENRNRAFMHWNTMAFPRPLT-VSGGAKQNKAFQPVKLRDTMTGAWHSVSVYLTL 1062
            PS+ L+PREV+TSV+E+L   N D+P   +G EV +RFLAP+ A  +   + +G +RYL +     F+ WN   F   +  ++G     +AFQ + LR + T  W S   +L L
Sbjct:   29 PSAALSPREVITSVMESLHRSNWDRPTECYGFEVAMRFLAPTHAAKLKKAKPTGFSRYLRQQHRIRFVKWNEYRFEGDVARLTGDDGVEEAFQMISLRSSPTAEWCSARFHLVL 142
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BLAST of Ec-28_000440.1 vs. uniprot
Match: A0A7R9YD20_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YD20_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 4.720e-9
Identity = 57/195 (29.23%), Postives = 98/195 (50.26%), Query Frame = 1 
Query:  589 LRARRDFGFEQDLGL----ELEKRNITKEAEA-KKIIDAGLEQMP-GVTSSATF-------LPSSE---LTPREVVTSVLEALKNNDQPYHNHGVEVFIRFLAPSSAMHGVEMSGVARY---LAENRNRAFMHWNTMAFPRPLTVSGGAKQNKAFQPVKLRDTMTGAWHSVSVYLTLDARSN----CWLIESCIV 1104
            LR R  FG E++        +E +N+T + +A ++++ A L  M   +  +AT        LP+S    LTP  VV S+L+A++ ND PY NHG+EV  RF + +S+    +     +Y   + ++     + W+ + F +PL  +G     KA Q ++LR   +  W  V+V   L  R+      WL++S ++
Sbjct:   81 LRERMGFGVEEEFARVRQQRIEGKNVTGDLDASEELLKATLRAMEQNIAENATAGQLPDIKLPTSPDPALTPGLVVMSILQAMRCNDSPYENHGIEVLTRFTSSASSATDTDEPSFRKYCDFIPKSEYGILLKWDAIRF-KPLEKAG----KKALQKIQLRLADSNEW--VTVKFALSERTTFLGETWLLDSFLI 268
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BLAST of Ec-28_000440.1 vs. uniprot
Match: A0A7S0K9M8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0K9M8_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 3.340e-5
Identity = 42/127 (33.07%), Postives = 63/127 (49.61%), Query Frame = 1 
Query:  733 LPSSELTPREVVTSVLEALKNNDQPYHNHGVEVFIRFLAPSSAMHGVEMSGVARYLAENRNRAFMHWNTMAFPRPLTVSGGAKQNK--AFQPVKLRDTMTGAWHSVSVYLTLDARSNCWLIESCIVK 1107
            +P +ELT  EVVT VLEAL+NND P  N GVE+   + + +S +  +E +       E    +      +     L       Q+K  AF  V+L D M     SV+  L+  +  +CWLI+S +V+
Sbjct:  243 VPDAELTAGEVVTVVLEALRNNDNPSTNRGVEILFAYSSSASILADLERAPSVEEYGEMLRTSPDQKILLEHVDVLFDKADYSQDKKRAFITVRLMD-MEKTLTSVNFILSTGSSDDCWLIDSHLVR 368
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BLAST of Ec-28_000440.1 vs. uniprot
Match: A0A7S2A8Z1_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A8Z1_TRICV)

HSP 1 Score: 52.8 bits (125), Expect = 9.910e-5
Identity = 42/134 (31.34%), Postives = 65/134 (48.51%), Query Frame = 1 
Query:  745 ELTPREVVTSVLEALKNNDQPYHNHGVEVFIRFLAPSSAM------HGVEMSGVARYLAENRNRA-FMHWNTMAFPRPLTVSGGAKQNKAFQPVKLRDTMTGAWHSVSVYLTLDARSN----CWLIESCIVKGE 1113
            ELT  EVVT+V+ ALKNN+ P  N+GV+V   + +P SA+       G+     A +L ++  +  F H + +      +      + KAF   +LR    G    VSV   L    N    CWL++S +++ E
Sbjct:    2 ELTAGEVVTTVVAALKNNNDPSPNYGVQVLFGYSSPGSAVMSAVRDEGMTPEEYADFLEDSEYKVLFEHEDCVIDKGDYSFD----RKKAFYNARLR-VGPGPLDFVSVNFILSTNGNEEDDCWLVDSMLIRPE 130
The following BLAST results are available for this feature:
BLAST of Ec-28_000440.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FII9_ECTSI1.190e-214100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3WL80_EMIHU4.320e-1137.72Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
A0A7R9YD20_9STRA4.720e-929.23Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S0K9M8_9STRA3.340e-533.07Hypothetical protein n=1 Tax=Leptocylindrus aporus... [more]
A0A7S2A8Z1_TRICV9.910e-531.34Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:469543..474011 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length1558
Hectar predicted targeting categorysignal peptide
Gene idEc-28_000440.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_000440Ec-28_000440Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_28 469543..474011 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000440.1Ec-28_000440.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_28 469721..473573 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000440.1.1Ec-28_000440.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 469543..469827 +
Ec-28_000440.1.2Ec-28_000440.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 470209..470404 +
Ec-28_000440.1.3Ec-28_000440.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 470574..470714 +
Ec-28_000440.1.4Ec-28_000440.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 471511..471651 +
Ec-28_000440.1.5Ec-28_000440.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 472303..472368 +
Ec-28_000440.1.6Ec-28_000440.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 472816..472940 +
Ec-28_000440.1.7Ec-28_000440.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 473190..473255 +
Ec-28_000440.1.8Ec-28_000440.1.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 473474..474011 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0004405UTR:Ec-28_000440.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_28 469543..469720 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000440.1CDS:Ec-28_000440.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_28 469721..469827 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0004403UTR:Ec-28_000440.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_28 473574..474011 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-28_000440.1 ID=Ec-28_000440.1|Name=Ec-28_000440.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=314bp
MAPQGNLAAGGLHVLLLLCCCVQWSHGFIAVSPCFRRGCSQQTLSSTNDL
HKRESRGSGRHGSLIRRRSGGPGFSLKANEAGGGAEEEDDTLELTKGFYS
EIAARLGKTAQGQPQDSQETAKDEDSGSEIDKAIYDELRARRDFGFEQDL
GLELEKRNITKEAEAKKIIDAGLEQMPGVTSSATFLPSSELTPREVVTSV
LEALKNNDQPYHNHGVEVFIRFLAPSSAMHGVEMSGVARYLAENRNRAFM
HWNTMAFPRPLTVSGGAKQNKAFQPVKLRDTMTGAWHSVSVYLTLDARSN
CWLIESCIVKGEV*
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spliced messenger RNA

>Ec-28_000440.1 ID=Ec-28_000440.1|Name=Ec-28_000440.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1558bp|location=Sequence derived from alignment at chr_28:469543..474011+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
AGGACTGCTGTCGTACCGCCGTACCAGGAGAAGGAGAGGGAGAGAGAGTA
AAGGAGTGAGAGAGTACTGGACACCCTGTGGGTGAAGACAACTCGGTGGC
GTGCTCCGGCGTCTCTCTTGTCCACGCGTGCAAAAGAACCGCAGAGCGTG
TGCCACTTTGAAGCAAGCGTGTACGATCATGGCACCGCAAGGAAATCTTG
CTGCTGGTGGTTTGCATGTGCTGCTCCTCCTCTGCTGCTGCGTTCAATGG
AGTCATGGGTTCATCGCCGTATCGCCATGTTTCAGGAGGGGATGTTCACA
GCAGACACTGTCCAGCACCAATGATTTGCACAAGAGGGAGAGCCGGGGAT
CTGGCAGACACGGCAGCCTCATTCGGCGTCGGTCAGGTGGACCGGGCTTT
TCCCTAAAAGCAAACGAGGCAGGGGGTGGCGCGGAGGAGGAAGACGATAC
GCTTGAGCTAACGAAAGGGTTTTACAGCGAGATCGCGGCACGCTTGGGCA
AGACTGCGCAGGGGCAACCGCAAGATAGCCAAGAAACGGCCAAAGACGAA
GATAGCGGCAGCGAGATCGACAAGGCTATCTACGACGAGCTTAGGGCACG
GCGCGACTTTGGTTTCGAGCAGGACCTGGGGCTGGAGCTGGAGAAACGGA
ACATTACGAAGGAGGCGGAGGCGAAGAAGATTATCGATGCGGGTCTGGAG
CAGATGCCTGGGGTGACGAGCTCGGCTACGTTCTTGCCGTCCTCGGAGCT
CACGCCAAGAGAGGTGGTGACTTCGGTTCTCGAGGCCCTCAAGAACAACG
ACCAACCCTACCACAACCACGGCGTCGAGGTTTTCATCAGATTCCTTGCC
CCGTCTAGCGCGATGCACGGGGTCGAAATGTCGGGCGTGGCCCGATATCT
GGCGGAGAATCGAAACCGTGCCTTCATGCACTGGAATACCATGGCATTCC
CGAGACCGCTGACGGTGTCGGGAGGGGCGAAGCAAAACAAGGCCTTCCAG
CCTGTCAAGCTCAGAGACACAATGACTGGCGCTTGGCACTCCGTGAGCGT
CTACCTCACACTGGACGCCCGGAGTAATTGCTGGCTCATAGAGTCTTGCA
TCGTTAAGGGAGAGGTGTAGGAAGGCAGGGAGAGGTGCTGCCACTCGACG
GATCTGGGTGGAGTGAAGAGCCTGAAACACGTCATCAGTATGCGGCGTCG
AGGGAGCGGATCCTTGACATGATACGCGGCAGTGAGTGGTTGAGGCGTCT
CGGGTAGAAGCAGTCTTTGTGGTTCGTTTTGTTTTTGTTGGTCTATGTTT
GAGGGAGAGCAATCGGGCGCGGAAACACTCGACCCTACTCAGTGAGCTCC
GTTGTCCAGAAAAGTATGTTCCATTGTGTTGCCTTCATCTGCGACCGGTG
TCAAAATGCGTGCGTGCGTGTTCGATCAACATCGGTCAGAGCTACCGTGG
CTGGAGTTGTGTGTTTGGATTGTGTTGATTTAGACTTAACGTACCCGATA
ATGTTGTATATATATCGTACGCCTAGAACGACTATCTGGCTCGAAGTAGA
CGTCCTGG
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protein sequence of Ec-28_000440.1

>Ec-28_000440.1 ID=Ec-28_000440.1|Name=Ec-28_000440.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=314bp
MAPQGNLAAGGLHVLLLLCCCVQWSHGFIAVSPCFRRGCSQQTLSSTNDL
HKRESRGSGRHGSLIRRRSGGPGFSLKANEAGGGAEEEDDTLELTKGFYS
EIAARLGKTAQGQPQDSQETAKDEDSGSEIDKAIYDELRARRDFGFEQDL
GLELEKRNITKEAEAKKIIDAGLEQMPGVTSSATFLPSSELTPREVVTSV
LEALKNNDQPYHNHGVEVFIRFLAPSSAMHGVEMSGVARYLAENRNRAFM
HWNTMAFPRPLTVSGGAKQNKAFQPVKLRDTMTGAWHSVSVYLTLDARSN
CWLIESCIVKGEV*
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mRNA from alignment at chr_28:469543..474011+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-28_000440.1 ID=Ec-28_000440.1|Name=Ec-28_000440.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=4469bp|location=Sequence derived from alignment at chr_28:469543..474011+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
AGGACTGCTGTCGTACCGCCGTACCAGGAGAAGGAGAGGGAGAGAGAGTA
AAGGAGTGAGAGAGTACTGGACACCCTGTGGGTGAAGACAACTCGGTGGC
GTGCTCCGGCGTCTCTCTTGTCCACGCGTGCAAAAGAACCGCAGAGCGTG
TGCCACTTTGAAGCAAGCGTGTACGATCATGGCACCGCAAGGAAATCTTG
CTGCTGGTGGTTTGCATGTGCTGCTCCTCCTCTGCTGCTGCGTTCAATGG
AGTCATGGGTTCATCGCCGTATCGCCATGTTTCAGGTATAAGTTGACGTG
CAGCGGGAGGGTGAGGGTCTCTAGTTTATCAACGCAACTTCATGATTCAC
ACCCACAACTTCATTTTTGTTGGAACAAAAGATTGCTGAACTTCCTCTGC
TCCTGCTCTTCACCATGTAAAAGGCAACATACCCCGCACTCAAAGCGACT
GCATGGGTTAGTCAGCTAATAAAGACACTCGAAGGCCATGAGCAGAGGCA
CATAAGAGCGTCTTGGGCGGTTTGTATTACACCTTCCAATAGTGCAATAC
AACGAGACACAGAGCAGTCATTCGTGGGCAATGTTGGCCTTAGATTTGCC
ATTCCGATGCAACTCTCTTTGCCGTTTGACGTTGATGTGTTTCGATGCCC
GCTTTCTCCGCATCAGGAGGGGATGTTCACAGCAGACACTGTCCAGCACC
AATGATTTGCACAAGAGGGAGAGCCGGGGATCTGGCAGACACGGCAGCCT
CATTCGGCGTCGGTCAGGTGGACCGGGCTTTTCCCTAAAAGCAAACGAGG
CAGGGGGTGGCGCGGAGGAGGAAGACGATACGCTTGAGCTAACGAAAGGG
TTTTACAGCGAGGTGGGGCGGGCATGACGATGACGCTTGACGATGGCGCT
TGCAGGCTTACGTGCCTGGATGGTTTTAGTCGGATGCTGCGAACTGCTGT
GCTGTGACCGGTGATCGTTTCTTTTTCCTGTGTTTTCGTGTTCTTCATCC
GTCTTGGCTTGGGCGATATTTTTTTTAACAGATCGCGGCACGCTTGGGCA
AGACTGCGCAGGGGCAACCGCAAGATAGCCAAGAAACGGCCAAAGACGAA
GATAGCGGCAGCGAGATCGACAAGGCTATCTACGACGAGCTTAGGGCACG
GCGCGACTTTGGTTTCGAGCAGGTATACGCCCCTCCCTTCTTTCTCGGGA
CCCACGAAAGGGCAACAGCAGTCGCTCATTCCAATCCCCGTAGCTTTTCC
GTTCCGTATCCGATCGCAAACCTCCGACGAGCCTCGATGACCTGGAGAGC
GCGATGAACACCCTTCTTCTTGCTTGAATCTTCCGGGAAAGACGTAGCTA
CCTGGTACAGGAGAAGCCTTCTCGGGCGTAGCCCCTGTCTCAAGCATTCA
TGTGCCACTCCGTACATGCTAGGCCGAGCGATCGGCTCGAACGCTGACGA
AGCCTCAAGGTCGGTTTGTAGCCACGTCTTGTTCGATGGCACACTCGCGA
GGTTAGAGGGGTGACTTCAGCGAGAAGTTACCACCTGCTTCAGTCCTGCA
GCAGTGTAAGTAAGGACACGGTTCGGAGGGAATCCGGCCGTGGACCTGTG
GTTCCACGGTGCCACCAGGTATTCTTTTCCAGCGGATCATTTTTACTCTC
AATGACGCAGGAGTCGACTGAAGTGTTTGTGGCGATTTTGCTGTTTTCAG
CCCTTTAAGGATATTTGTGCATGCGGTCCGATTAGCTTTGGCAGACGAAA
CCCGATTCTCGGTCCGCATGCGGCTACCGATCGTATTTCAGTTATGTATC
GACGGTTATTTGCCATCGGCCCGCTTTGGTCATTGCAAGCTTGCGGTGTC
GATCCACAAGCGGCCGCCGATAGGATCTCAGCATATCGACGGTTATTTGC
GTACGTATTTACATGGCGGGGTGGATGGTCCGCATTGGCCATGGCATGAC
GGTGCTCTCTGTACCCAGGACCTGGGGCTGGAGCTGGAGAAACGGAACAT
TACGAAGGAGGCGGAGGCGAAGAAGATTATCGATGCGGGTCTGGAGCAGA
TGCCTGGGGTGACGAGCTCGGCTACGTTCTTGCCGTCCTCGGAGCTCACG
CCAAGAGAGGTAAGGAGTGTGTGCATGTGTGCATACGTGGGACCACGGTA
TCTTCCGCACTACTGCTGTAGCGTACTGCTATTTGGCGCCCGTGTGTTGC
CCAGTGCAAGACTCCCCCAATCATGTACGTCGTTGGGTTGATGTTAATGC
CAGCATATTTGCCGCTCCGCTGCGACAGTGTCTGTTTCTAGATTCGGTAG
AGCATGCCGTGACCGACTGTTTTCCTTTGTGCAGTGACGTGTCTCGAGAA
CGTACGTGCTATCCTACACTTGCCACCTGTGACAGGTACTACACTTGCAC
TTGCGGGTAGCGCCGGTAGGATGGCACAGAACGGAACTTTGCTCTTTAGG
ACATTTGGTCGGGCGAATCGCGTCAAGAAAACCACGTCACAAGGGACTTG
CTTGCCACTCATGCCTCGTTAGTTGTGCAGGCACATGCCGTACAAAAAAA
GGGCTTGACGAATACTCTTGATGTGGGGCCTCAACTTGAGGACATGTCGA
TACTCTGTATCTCGGAAATGTCCGGACGTATTTACGAAGCTGTAGGTTAG
TTGAATGTCATTCCCCGACACTCTGCCAAAATCACTCCCTGAGTTCGGCA
GTGAGCCGACCCAGTGATGAATTTTCATGAAAATCCCTTGTTGATTTTTC
TCGTTTACAGGTGGTGACTTCGGTTCTCGAGGCCCTCAAGAACAACGACC
AACCCTACCACAACCACGGCGTCGAGGTGAGGTTGAACTACAAACGTCGG
TAGTGCAACGATCTAAAGGTCGGTGATGGCGTTTCTTATCGCTCCTGGAA
ACCTCGCAGCGGCCAAGTTTCGCAATCGAGGCGCCTCTTTAACTCAATAC
CGCCGTAATGGTGCCCGTGTTAGGCCGTACAGCTAGTGCCAAGTCATTTG
GGCGGCCTTGTACCGGGCACCCGGCACTATTCAGAGTAAGAAACAGCTTG
AATCTTCCATCCATGTCACGCGATTTTCACCGGCCTTACAGGGCCACCGG
CCACATGTAGGGACCACACTGCTCCTGTAGTGCTTCAGCTCAGCTTTCAA
TAGGTTTCTGGCAAACGAAGGTTGCCTGTTCCATGCCCATGCAACTCCTC
GTCGACCTCAAGAAGAGCCAAGGTCGTCTCGACGCGATCCGGTGCTGACA
GAAATGCGCTAATTGTTGTGCAGGTTTTCATCAGATTCCTTGCCCCGTCT
AGCGCGATGCACGGGGTCGAAATGTCGGGCGTGGCCCGATATCTGGCGGA
GAATCGAAACCGTGCCTTCATGCACTGGAATACCATGGCATTCCCGAGGT
GGGTCTTCGAACGTTGTTCGCAGTAGTACCACGGATGCTGGCACCTCTAC
ATAAGCGCCTTCGCCATGCTCCTTCTCTGCACCAAGCGTGTGTTTCTAAG
TCGTGCCACGTGATTCTATGTGTGTGTAACATTGCGCTTCGCATGTCTCG
TAACATGAAACCACCCCCAACCACCCTTGCACGTGTGTTCATCCCTCAGT
TCCCCATGTGTACCTCTTGTGACTGCTCGCGACCTAATTTGATCCAGACC
GCTGACGGTGTCGGGAGGGGCGAAGCAAAACAAGGCCTTCCAGCCTGTCA
AGCTCAGAGACACGTGAGTCCTTGCACATTTTTACACCAGACCACCCTCC
CCGAAGCATTCTCGTGCTCTCGCTCGTTGCGCTGAATGCTGGCCAGCCAA
TAGTACGTTTGTTTCCCTCATCGTCAGACGGTTACGCCTGGCGAGACTAG
GATCATGTAGCCACCACTACTGTAGCAGGAGAACAAGCGCGGAGACTAAC
ACAGTTGTCATTGGCGCTGGTCTCTCGGCAGAATGACTGGCGCTTGGCAC
TCCGTGAGCGTCTACCTCACACTGGACGCCCGGAGTAATTGCTGGCTCAT
AGAGTCTTGCATCGTTAAGGGAGAGGTGTAGGAAGGCAGGGAGAGGTGCT
GCCACTCGACGGATCTGGGTGGAGTGAAGAGCCTGAAACACGTCATCAGT
ATGCGGCGTCGAGGGAGCGGATCCTTGACATGATACGCGGCAGTGAGTGG
TTGAGGCGTCTCGGGTAGAAGCAGTCTTTGTGGTTCGTTTTGTTTTTGTT
GGTCTATGTTTGAGGGAGAGCAATCGGGCGCGGAAACACTCGACCCTACT
CAGTGAGCTCCGTTGTCCAGAAAAGTATGTTCCATTGTGTTGCCTTCATC
TGCGACCGGTGTCAAAATGCGTGCGTGCGTGTTCGATCAACATCGGTCAG
AGCTACCGTGGCTGGAGTTGTGTGTTTGGATTGTGTTGATTTAGACTTAA
CGTACCCGATAATGTTGTATATATATCGTACGCCTAGAACGACTATCTGG
CTCGAAGTAGACGTCCTGG
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Coding sequence (CDS) from alignment at chr_28:469543..474011+

>Ec-28_000440.1 ID=Ec-28_000440.1|Name=Ec-28_000440.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=942bp|location=Sequence derived from alignment at chr_28:469543..474011+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGCACCGCAAGGAAATCTTGCTGCTGGTGGTTTGCATGTGCTGCTCCT
CCTCTGCTGCTGCGTTCAATGGAGTCATGGGTTCATCGCCGTATCGCCAT
GTTTCAGGAGGGGATGTTCACAGCAGACACTGTCCAGCACCAATGATTTG
CACAAGAGGGAGAGCCGGGGATCTGGCAGACACGGCAGCCTCATTCGGCG
TCGGTCAGGTGGACCGGGCTTTTCCCTAAAAGCAAACGAGGCAGGGGGTG
GCGCGGAGGAGGAAGACGATACGCTTGAGCTAACGAAAGGGTTTTACAGC
GAGATCGCGGCACGCTTGGGCAAGACTGCGCAGGGGCAACCGCAAGATAG
CCAAGAAACGGCCAAAGACGAAGATAGCGGCAGCGAGATCGACAAGGCTA
TCTACGACGAGCTTAGGGCACGGCGCGACTTTGGTTTCGAGCAGGACCTG
GGGCTGGAGCTGGAGAAACGGAACATTACGAAGGAGGCGGAGGCGAAGAA
GATTATCGATGCGGGTCTGGAGCAGATGCCTGGGGTGACGAGCTCGGCTA
CGTTCTTGCCGTCCTCGGAGCTCACGCCAAGAGAGGTGGTGACTTCGGTT
CTCGAGGCCCTCAAGAACAACGACCAACCCTACCACAACCACGGCGTCGA
GGTTTTCATCAGATTCCTTGCCCCGTCTAGCGCGATGCACGGGGTCGAAA
TGTCGGGCGTGGCCCGATATCTGGCGGAGAATCGAAACCGTGCCTTCATG
CACTGGAATACCATGGCATTCCCGAGACCGCTGACGGTGTCGGGAGGGGC
GAAGCAAAACAAGGCCTTCCAGCCTGTCAAGCTCAGAGACACAATGACTG
GCGCTTGGCACTCCGTGAGCGTCTACCTCACACTGGACGCCCGGAGTAAT
TGCTGGCTCATAGAGTCTTGCATCGTTAAGGGAGAGGTGTAG
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Synonyms
The feature 'Ec-28_000440.1' has the following synonyms
Synonym
Esi0120_0076
Esi_0120_0076