Ec-28_000420.5 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-28_000420.5
Unique NameEc-28_000420.5
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length177
Homology
[Close]
BLAST of Ec-28_000420.5 vs. uniprot
Match: A0A6H5L2P2_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2P2_9PHAE)

HSP 1 Score: 488 bits (1257), Expect = 1.550e-154
Identity = 346/707 (48.94%), Postives = 385/707 (54.46%), Query Frame = 2 
Query:  182 RVVYDFSNSAIALRRQFGAGFTIGRILDLQLAFEALHGRFGADVVTVLRAFGQQVSYSDAAFR----HSAVKKRQP*GDLLTRQHWAW--------RHSQSYRLPSHGKRR--LESVQEKAKGHRAGSFSGTTEFAMSSWSQDTRRMAFRNHGSCWGGGVGRILTSFELNQ-REGRAIGSFGTGAVLERDTGCHRRQRPHVRPIVGPRIGGAASRPMQNVASLSYST*SEKKRSPTTVPFFEYNWVDACLVLSVHGTIRKWQHLFVRLWHKYRPGGL*MDYAC*PLFVPLAKP*LLNWVLPLLL*C*VGP*QLGAE*WRGARSQLSPRDSGTYS*RLSRRTPDRKHVQNVQDLNELVLDEGRRPYATLQGAES---CSSAATRVWS*PKNTSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXS*GAGSGSSA*LCGLAVTSRVVQAWSTTCSST------CRAAPQA--RACRFC----PCAGQARVWQDHRPSRHLPKDLPGAAVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPDKTDQHNVMKEALQNHTPQTIVVDEVSNKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTSVTLGDAMAIATNAGNKVQRQRAGAPIFDTIVELERGQVNKWTIVWNVDLAVDAILSGKPYKVSQRTRIPNDSGLQQAGADHEDAAFLLKHAYAMEQTKQYY 2212
            +VVYDFSNSAIALRRQFGAGFTIGRILDLQLA EALHG FGAD+VTVL AFGQ  SY+DAAFR      A   R+P  D  T    A           S    L   G++   LE+ Q              TEFAMSS  QDTRR+AFRNHGSC GGGVGRILTSF+L Q RE   + +    A+    T       P +     P     +S+    VA    S     KR P         +++  L  S                                                                                            H+QN+QDLNELVLDEGRRPYATLQG      CS  +  V     +                               S  A            VT R+ + +S + S         + +P    RA        P +G+  V +D    R + ++     VVIVDTSNEIAGDGHIPHLAAIGQSRRMMVP+K  QHNVMKEALQNHTPQTIVVDEVS+KNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTSVTLGDAMA ATNAGNK+QRQRAGAPIFDTIVELERGQVNKWTIV NVDLAVDAILSGKPYKV QRTRIP+DSGLQQAGAD ED AFLLKHAYAME+ KQYY
Sbjct:  309 KVVYDFSNSAIALRRQFGAGFTIGRILDLQLASEALHGHFGADIVTVLTAFGQPASYNDAAFRALSCEEASTMRRPI-DATTLGLAAQPVISLAKVTESAILSLSKEGQKDIVLEASQR------------MTEFAMSSGRQDTRRVAFRNHGSCCGGGVGRILTSFDLKQARERGGLSAPSRQALSSNAT-------PAIFDDTNPTSALDSSKQSDGVAQDPNSPHEILKRIPE-------EFLEEYLTES--------------------------------------------------------------------------------------------HLQNLQDLNELVLDEGRRPYATLQGRGKLFLCSDKSVVVTKEHIDMVVGRLDLEDKFAGDNRAGVPGQLHRISVMRSREARRI-------FGVTLRIGRYFSGSASLVDDVLFHVQGSPDKPERAASVLVLGKPGSGKTTVLRDI--CRKISQEQ---TVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPNKAGQHNVMKEALQNHTPQTIVVDEVSDKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTSVTLGDAMASATNAGNKIQRQRAGAPIFDTIVELERGQVNKWTIVRNVDLAVDAILSGKPYKVEQRTRIPHDSGLQQAGADPEDTAFLLKHAYAMEKLKQYY 884
[Close]
BLAST of Ec-28_000420.5 vs. uniprot
Match: D7FII7_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FII7_ECTSI)

HSP 1 Score: 402 bits (1034), Expect = 1.880e-129
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 2 
Query: 1604 VVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPDKTDQHNVMKEALQNHTPQTIVVDEVSNKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTSVTLGDAMAIATNAGNKVQRQRAGAPIFDTIVELERGQVNKWTIVWNVDLAVDAILSGKPYKVSQRTRIPNDSGLQQAGADHEDAAFLLKHAYAMEQTKQYY 2212
            VVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPDKTDQHNVMKEALQNHTPQTIVVDEVSNKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTSVTLGDAMAIATNAGNKVQRQRAGAPIFDTIVELERGQVNKWTIVWNVDLAVDAILSGKPYKVSQRTRIPNDSGLQQAGADHEDAAFLLKHAYAMEQTKQYY
Sbjct:  103 VVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPDKTDQHNVMKEALQNHTPQTIVVDEVSNKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTSVTLGDAMAIATNAGNKVQRQRAGAPIFDTIVELERGQVNKWTIVWNVDLAVDAILSGKPYKVSQRTRIPNDSGLQQAGADHEDAAFLLKHAYAMEQTKQYY 305
[Close]
BLAST of Ec-28_000420.5 vs. uniprot
Match: A0A6B2L513_9EUKA (AAA domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L513_9EUKA)

HSP 1 Score: 187 bits (475), Expect = 3.960e-48
Identity = 92/169 (54.44%), Postives = 121/169 (71.60%), Query Frame = 2 
Query: 1604 VVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPDKTDQHNVMKEALQNHTPQTIVVDEVSNKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTSVTLGDAMAIATNAGNKVQRQRAGAPIFDTIVELERGQVNKWTIVWNVDLAVDAILSGKPYKVSQRTR 2110
            V +VDTSNEI GDG IPH +++G +RRMMVP   +Q NVM E LQNHTP  IV+DE+  +NE  A   +K RGVR++ASAHG+L++L++N +LN L+GG  +VTLGD  A  TN  +K+  QR   PIFD ++EL +G+ NKW +V  V+ AVD IL GKPY V  R+R
Sbjct:  225 VCVVDTSNEICGDGKIPH-SSVGLARRMMVPSVEEQGNVMVECLQNHTPDVIVIDEIGRRNEVEAAATVKQRGVRLIASAHGNLETLVKNKQLNGLIGGVETVTLGDMAAKKTNNNSKLAAQRIAPPIFDVVIELMKGEFNKWRVVTKVEEAVDKILKGKPYPVQIRSR 392
[Close]
BLAST of Ec-28_000420.5 vs. uniprot
Match: A0A7S1EUK0_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EUK0_9RHOD)

HSP 1 Score: 175 bits (444), Expect = 4.370e-45
Identity = 87/172 (50.58%), Postives = 118/172 (68.60%), Query Frame = 2 
Query: 1604 VVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPDKTDQHNVMKEALQNHTPQTIVVDEVSNKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTSVTLGDAMAIATNAGNKVQRQRAGAPIFDTIVELERGQVNKWTIVWNVDLAVDAILSGKPYKVSQRTRIPN 2119
            V ++DTSNEI GDG I H +++G + RMM+P  + Q  VM E LQNHTP  I++DE+  K E +A   +K R VR++ASAHGD +SL+ NP+L  L+GG  +VTLGDA + A N G K + +R G+PIFD I+EL+  + N WTI+ +   AVD ILS K YKV +R R P+
Sbjct:  143 VWVIDTSNEIGGDGDIKH-SSLGLASRMMIPTGSSQKEVMVECLQNHTPDVIIIDEIGRKEEVQAAKTVKERDVRLIASAHGDFESLMRNPDLVGLIGGLQTVTLGDAASKAENDGRKTKTERGGSPIFDVIIELKPREFNTWTIIEDTKTAVDCILSNKSYKVQRRHRNPD 313
[Close]
BLAST of Ec-28_000420.5 vs. uniprot
Match: A0A7S2IC94_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IC94_9STRA)

HSP 1 Score: 170 bits (431), Expect = 1.310e-44
Identity = 96/177 (54.24%), Postives = 117/177 (66.10%), Query Frame = 2 
Query: 1604 VVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPDKTDQHNVMKEALQNHTPQTIVVDEVSNKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTSVTLGDAMAI--ATNAGN----KVQRQRAGAPIFDTIVELERGQVNKWTIVWNVDLAVDAILSGKPYKVSQRTRIP 2116
            V IVDTSNEIAGDG I H   +G +RRMMVP    Q +VM E +QNHTP+ +V+DE+    E  A    K RGVR+VASAHGDL+ L++NP+L  L+GG  +VTLGDA A   A + GN    K++ QRAGAP FD IVEL RG  N W IV +V  AVD +L G  Y   +RTR P
Sbjct:   35 VCIVDTSNEIAGDGDIVH-PCVGFARRMMVPSLDKQGSVMIECVQNHTPEVMVIDEIGRTAEVEAARTCKQRGVRLVASAHGDLRKLIKNPKLRGLIGGVETVTLGDAQAAKEAKSTGNSSIQKLKAQRAGAPTFDIIVELRRGAHNDWRIVMDVGNAVDKVLEGLEYPAQRRTRDP 210
[Close]
BLAST of Ec-28_000420.5 vs. uniprot
Match: A0A7S4RVG8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RVG8_9STRA)

HSP 1 Score: 172 bits (437), Expect = 9.790e-43
Identity = 95/181 (52.49%), Postives = 117/181 (64.64%), Query Frame = 2 
Query: 1604 VVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPDKTDQHNVMKEALQNHTPQTIVVDEVSNKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTSVTLGDAMAIA-----TNAG-----NKVQRQRAGAPIFDTIVELERGQVNKWTIVWNVDLAVDAILSGKPYKVSQRTRIP 2116
            V +VDTSNEIAGDG+IPH   IG +RRMMVP    Q NVM E +QNHTP  +V+DE+    E  A   +K RGVR++ASAHGDL+ LL+N EL  LVGG  +VTLGD  A       +N G     +K + QR G P FD IVE+ RG+ ++W I  +   AVDAIL G+ YKV  RTR P
Sbjct:  260 VCVVDTSNEIAGDGNIPH-PCIGDARRMMVPSLDAQSNVMVECVQNHTPHVMVIDEIGRPREVEAARTVKQRGVRIIASAHGDLRKLLKNKELRGLVGGVETVTLGDKAAKEEAERRSNGGANGQFSKTKAQRMGEPTFDIIVEVRRGEKHEWRITRDAKTAVDAILDGQKYKVESRTRDP 439
[Close]
BLAST of Ec-28_000420.5 vs. uniprot
Match: A0A6B2L8S5_9EUKA (AAA domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L8S5_9EUKA)

HSP 1 Score: 167 bits (424), Expect = 1.360e-42
Identity = 84/169 (49.70%), Postives = 113/169 (66.86%), Query Frame = 2 
Query: 1604 VVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPDKTDQHNVMKEALQNHTPQTIVVDEVSNKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTSVTLGDAMAIATNAGNKVQRQRAGAPIFDTIVELERGQVNKWTIVWNVDLAVDAILSGKPYKVSQRTR 2110
            VV+VDTSNEI GDG +PH  ++G  RRMMVP   +Q  VM E LQNHTP+ +V+DE+  K E  A + +K RGV++VASAHG+L  L++N  LN LVGG  +V LGD  A   N G K++ QR   P+F+ ++EL++G + +W I  N+   VDAIL G+ Y    RTR
Sbjct:  115 VVVVDTSNEICGDGDVPH-ESVGLGRRMMVPSIGEQERVMIECLQNHTPEVLVIDEIGRKKEVLAAMTVKQRGVQIVASAHGNLVDLVKNKALNGLVGGVEAVLLGDEAA-RENFGRKIKEQRVAEPLFEVVIELKKGDLAQWNIYTNLSQTVDAILDGRSYSYQVRTR 281
[Close]
BLAST of Ec-28_000420.5 vs. uniprot
Match: A0A485L184_9STRA (Aste57867_14003 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L184_9STRA)

HSP 1 Score: 167 bits (422), Expect = 1.120e-41
Identity = 94/191 (49.21%), Postives = 117/191 (61.26%), Query Frame = 2 
Query: 1604 VVIVDTSNEIAG------------------DGHIPHLAAIGQSRRMMVPDKTDQHNVMKEALQNHTPQTIVVDEVSNKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTSVTLGDAMAIATNAGNKVQRQRAGAPIFDTIVELERGQVNKWTIVWNVDLAVDAILSGKPYKVSQRTRIPND 2122
            V IVDTSNEIAG                  DG +PH   +G +RR+MVP    Q  +M E +QNHTPQ ++VDEV   NE  A    K RGVR++ASAHG L+ LL+N  L  LVGG  SVT+GDA+A  +    K+  QRAG P+F+ IVELE+GQ + W +V N   AVDAIL GK YK   R+RI +D
Sbjct:  158 VCIVDTSNEIAGVVNFESLRLDLLTLTTVGDGDVPH-PCVGLARRIMVPSLDAQSAIMVECVQNHTPQVLLVDEVGRANEVEAARTCKQRGVRMIASAHGSLRKLLKNKPLRGLVGGVESVTVGDALAQKSGKLKKIVAQRAGDPVFEVIVELEKGQYSTWRVVLNAAEAVDAILEGKTYKAEVRSRIGDD 347
[Close]
BLAST of Ec-28_000420.5 vs. uniprot
Match: A0A1V9YTH6_9STRA (AAA domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YTH6_9STRA)

HSP 1 Score: 174 bits (440), Expect = 1.220e-41
Identity = 94/174 (54.02%), Postives = 117/174 (67.24%), Query Frame = 2 
Query: 1604 VVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPDKTDQHNVMKEALQNHTPQTIVVDEVSNKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTSVTLGDAMAIATNAGN-----KVQRQRAGAPIFDTIVELERGQVNKWTIVWNVDLAVDAILSGKPYKVSQRTR 2110
            V IVDTSNEIAGDG+IPH   +G +RRMMVP    Q  VM + +QNHTP+ +V+DE+   NE  A    K RGVR+VASAHGDL+ LL+N  L+ LVGGT SVT+GDA+A   + G      K Q QRAG PIF+ +VEL RG+   W +V +   AVDAIL G+ Y+   RTR
Sbjct:  478 VCIVDTSNEIAGDGNIPH-PCVGLARRMMVPSLDKQAAVMVKVVQNHTPEVMVIDEIGRANEVEAARTCKQRGVRIVASAHGDLRKLLKNKPLSGLVGGTLSVTVGDALAKEKSRGKSGPIRKQQTQRAGEPIFEVVVELRRGEYTTWRLVMDAAAAVDAILEGQMYEAQVRTR 650
[Close]
BLAST of Ec-28_000420.5 vs. uniprot
Match: A0A067BXX8_SAPPC (AAA domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BXX8_SAPPC)

HSP 1 Score: 176 bits (447), Expect = 3.450e-41
Identity = 98/177 (55.37%), Postives = 116/177 (65.54%), Query Frame = 2 
Query: 1604 VVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPDKTDQHNVMKEALQNHTPQTIVVDEVSNKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTSVTLGDAMAIATNAGN------KVQRQRAGAPIFDTIVELERGQVNKWTIVWNVDLAVDAILSGKPYKVSQRTRIP 2116
            V IVDTSNEIAGDG IPH   +G +RRMMVP   DQ  VM E +QNHTP+ +V+DE+   NE  A    K RGVR+VASAHGDL+ LL+N  L  LVGG  SVT+GDA+A      +      K+  QR G PIFD IVEL RGQ N W IV +   AVDAIL+G+ Y+   RTR P
Sbjct: 1832 VCIVDTSNEIAGDGDIPH-PCVGLARRMMVPSLNDQAAVMVECVQNHTPEVMVIDEIGRPNEVEAARTCKQRGVRIVASAHGDLRKLLKNKPLRGLVGGVESVTVGDALAKEKQKKDDNGPLRKLLAQRGGEPIFDVIVELRRGQYNAWRIVTDAASAVDAILAGEAYEAQVRTRPP 2007
The following BLAST results are available for this feature:
BLAST of Ec-28_000420.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2P2_9PHAE1.550e-15448.94AAA domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FII7_ECTSI1.880e-129100.00AAA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6B2L513_9EUKA3.960e-4854.44AAA domain-containing protein n=1 Tax=Arcella inte... [more]
A0A7S1EUK0_9RHOD4.370e-4550.58Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A7S2IC94_9STRA1.310e-4454.24Hypothetical protein (Fragment) n=1 Tax=Helicothec... [more]
A0A7S4RVG8_9STRA9.790e-4352.49Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A6B2L8S5_9EUKA1.360e-4249.70AAA domain-containing protein n=1 Tax=Arcella inte... [more]
A0A485L184_9STRA1.120e-4149.21Aste57867_14003 protein n=1 Tax=Aphanomyces stella... [more]
A0A1V9YTH6_9STRA1.220e-4154.02AAA domain-containing protein n=1 Tax=Achlya hypog... [more]
A0A067BXX8_SAPPC3.450e-4155.37AAA domain-containing protein n=1 Tax=Saprolegnia ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:436391..453364 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score350.9
Seed ortholog evalue3.5e-94
Seed eggNOG ortholog2880.D7FII7
Length2984
Hectar predicted targeting categoryother localisation
Gene idEc-28_000420.5
EggNOG free text desc.ATPases associated with a variety of cellular activities
EggNOG OGs2QQ4X@2759,COG3854@1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_000420Ec-28_000420Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_28 436391..453364 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000420.5.1Ec-28_000420.5.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 436391..436476 +
Ec-28_000420.5.2Ec-28_000420.5.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 437089..437189 +
Ec-28_000420.5.3Ec-28_000420.5.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 445655..445839 +
Ec-28_000420.5.4Ec-28_000420.5.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 446335..446428 +
Ec-28_000420.5.5Ec-28_000420.5.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 446608..446676 +
Ec-28_000420.5.6Ec-28_000420.5.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 446927..447045 +
Ec-28_000420.5.7Ec-28_000420.5.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 447236..447759 +
Ec-28_000420.5.8Ec-28_000420.5.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 448230..448303 +
Ec-28_000420.5.9Ec-28_000420.5.9Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 448632..448795 +
Ec-28_000420.5.10Ec-28_000420.5.10Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 449173..449267 +
Ec-28_000420.5.11Ec-28_000420.5.11Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 449663..449763 +
Ec-28_000420.5.12Ec-28_000420.5.12Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 450062..450177 +
Ec-28_000420.5.13Ec-28_000420.5.13Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 450766..450867 +
Ec-28_000420.5.14Ec-28_000420.5.14Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 451169..451307 +
Ec-28_000420.5.15Ec-28_000420.5.15Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 451807..451989 +
Ec-28_000420.5.16Ec-28_000420.5.16Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 452533..453364 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0004205UTR:Ec-28_000420.5Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_28 436391..436476 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000420.5CDS:Ec-28_000420.5Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_28 450146..450177 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0004203UTR:Ec-28_000420.5Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_28 452608..453364 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000420.5Ec-28_000420.5Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_28 450146..452607 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-28_000420.5 ID=Ec-28_000420.5|Name=Ec-28_000420.5|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=177bp
MMVPDKTDQHNVMKEALQNHTPQTIVVDEVSNKNEARACLDIKARGVRVV
ASAHGDLQSLLENPELNTLVGGTTSVTLGDAMAIATNAGNKVQRQRAGAP
IFDTIVELERGQVNKWTIVWNVDLAVDAILSGKPYKVSQRTRIPNDSGLQ
QAGADHEDAAFLLKHAYAMEQTKQYY*
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spliced messenger RNA

>Ec-28_000420.5 ID=Ec-28_000420.5|Name=Ec-28_000420.5|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2984bp|location=Sequence derived from alignment at chr_28:436391..453364+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ACCCGATCTGTCCTCTTGCTGGCATATACACCAAGATAGCTGCATGCTCA
AGGCGAAAGGAGAAAACAGGCTTGCCAAAGATTGAGGGAGAGAGCGCGCG
CGCGATGACAGATCGACAGGAGCACTTCCGCCAGGGTTGCGCAAGAGGTC
GTGAGGCACGCATCCCCTTGCACCCCCGCCCTGCGAGGTGGTGTACGACT
TCAGCAACAGCGCGATTGCCTTGCGGCGTCAGTTTGGCGCGGGGTTCACG
ATTGGTAGAATCCTGGACCTCCAGCTGGCCTTTGAAGCTCTCCACGGGCG
CTTCGGTGCGGATGTCGTGACAGTCTTGAGAGCTTTCGGGCAGCAGGTTT
CCTACAGCGACGCCGCCTTCAGGGCACTCAGCTGTGAAGAAGCGTCAACC
ATGAGGCGACCTATTGACACGACAACATTGGGCTTGGCGGCACAGCCAGT
CTTATCGCTTGCCAAGGTCACGGAAAGCGCCGTCTTGAGTCTGTCCAAGA
AAAGGCAAAAGGACATCGTGCTGGAAGCTTCTCAGCGGACGACAGAGTTC
GCCATGTCCTCCTGGAGCCAAGACACGCGGAGGATGGCGTTTCGCAACCA
CGGTTCTTGCTGGGGAGGCGGGGTCGGGAGAATTCTGACCAGCTTCGAGC
TCAAGCCAGAGAGAAGGTCGGGCTATCGGCTCCTTCGGGACAGGCGCTGT
CCTCGAACGCGACACCGGCTGTCATCGGCGACAACGACCCCACGTACGTC
CCATTGTCGGGCCTAGAATTGGGGGAGCAGCTTCGCGTCCGATGCAAAAT
GTAGCGAGTTTGAGCTACAGCACGTAGTCGGAGAAGAAACGTAGCCCCAC
GACCGTGCCATTCTTTGAATATAACTGGGTGGACGCATGCCTAGTGTTGT
CGGTACATGGCACGATTAGAAAATGGCAGCATTTATTTGTTCGGCTGTGG
CACAAGTATCGGCCTGGAGGCTTATGAATGGACTACGCTTGCTAACCTCT
CTTCGTCCCCCTTGCAAAGCCCTGATTGCTGAACTGGGTATTACCCTTGT
TACTGTAGTGTTAGGTCGGCCCTTGACAGCTTGGAGCAGAATGATGGCGT
GGAGCGAGATCCCAACTCTCCCCACGAGATTCTGGAACTTATTCCTGAAG
ACTTTCTCGAAGAACACCTGACAGAAAGGCACGTGCAGAACGTACAGGAT
CTGAACGAGCTCGTTCTCGACGAAGGAAGGAGGCCCTACGCCACTCTGCA
AGGGCGCGGAAAGCTGTTCCTCTGCAGCGACAAGAGTGTGGTCGTGACCA
AAGAACACATCGACATGGTCGTTGGGCGGCTCGACCTCGAGGGCAAGTTC
GCGGGCGACAACCGAGCGGGCGTCCCGGGACAGCTGCACCGCATCAGCGT
CATGAGGGGCAGGGAGGCGGATCTTCGGCGTGACTCTGCGGATTGGCCGT
TACTTCCCGGGTAGTGCAGGCTTGGTCGACGACCTGCTCTTCCACGTGCA
GGGCAGCCCCGACAAGCCCGAGCGTGCCGCTTCTGTCCTTGTGCTGGGCA
AGCCAGGGTGTGGCAAGACCACCGTCCTTCGCGACATCTGCCGAAAGATC
TCCCAGGAGCAGACCGTGGTGATTGTGGACACGAGCAACGAGATTGCCGG
CGACGGCCACATCCCTCACCTCGCGGCCATCGGACAGAGCCGGAGGATGA
TGGTTCCGGACAAGACAGACCAGCACAACGTGATGAAAGAGGCGCTTCAG
AACCACACGCCCCAGACGATTGTGGTGGATGAGGTATCCAACAAGAACGA
GGCTAGGGCATGCTTGGACATCAAGGCTCGAGGCGTCCGTGTGGTGGCGA
GTGCCCACGGAGACTTGCAATCGCTGCTCGAGAACCCGGAACTCAACACT
CTGGTCGGAGGCACGACAAGCGTAACCCTAGGTGATGCGATGGCCATCGC
TACCAACGCGGGAAACAAGGTCCAGAGGCAGCGAGCCGGTGCACCGATCT
TTGACACGATCGTAGAGCTAGAGCGGGGGCAAGTGAACAAGTGGACCATC
GTGTGGAATGTCGACCTCGCTGTGGACGCTATCCTGAGCGGGAAGCCGTA
CAAGGTGTCGCAGAGAACCCGCATCCCGAATGACTCGGGCCTCCAACAAG
CGGGTGCTGACCACGAAGATGCGGCTTTCCTTCTCAAGCACGCCTACGCG
ATGGAACAGACCAAGCAGTACTACTGATTGGAAGTCGTTCGCGGGGCGGT
GAAAAGGGTATAATGGTCCTTGAACTTGAGTCTTTGATGCCAAGGTACTG
TAGACCATGGATACGTACACCAGCCTTGGCAGAGATGAGACAGGTTTTTG
GAGTACGCTGGCGTGTGTCCGATTTTGTGTGTCTGAATTGCGAGCCCCCG
TTGATTTGCAAACTGCCAGAGGCAGAGCTTAGTGTGAGCTGATGATGCAT
GGCTGTCCAGTATAGAACGGAGGGATTCGGTCGGGACTTTCGATCGATGA
AGCGTAGCTTGAAGGTGTGTATTCGTTGTAGAGATAACGTTTAAGGTCTC
ACACGAATGATGCCATCGGAGTGGGTACCACAATGTTACAAATATTGATC
CTGAAATGTGTTGAGACTGAATGTGTTGAACTGACGAAATAAAAAGAATT
TGATAACGCGATCTCTCACAGGGATGGGGGGGGAGGTGAATCGAAAGCAG
TTTGTCCGACGACGACGAGAGTAGTGCGAATGTTTGTTTTATTCCCCGTT
CGACAACGAGAGGCGTTCTCAGACGTGTGCCTTCGACCTACTCTAGTTTT
ATTGACAGTTGCCATCTTGCAGGGCTCGCTGTTTTATGTACGTCCCACGA
AAATCACCTAGAGGTGTAGACCAAACCCAGGGGTCCAGCGTGGAGGAGAT
TATCAAACACAGAACAACGATAAGGATCATTCGAGTTTCGAGAGCTGAAC
ATTCGAACAAGTGGGACTCCGAGAATTCCCGCAG
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protein sequence of Ec-28_000420.5

>Ec-28_000420.5 ID=Ec-28_000420.5|Name=Ec-28_000420.5|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=177bp
MMVPDKTDQHNVMKEALQNHTPQTIVVDEVSNKNEARACLDIKARGVRVV
ASAHGDLQSLLENPELNTLVGGTTSVTLGDAMAIATNAGNKVQRQRAGAP
IFDTIVELERGQVNKWTIVWNVDLAVDAILSGKPYKVSQRTRIPNDSGLQ
QAGADHEDAAFLLKHAYAMEQTKQYY*
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mRNA from alignment at chr_28:436391..453364+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-28_000420.5 ID=Ec-28_000420.5|Name=Ec-28_000420.5|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=16974bp|location=Sequence derived from alignment at chr_28:436391..453364+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ACCCGATCTGTCCTCTTGCTGGCATATACACCAAGATAGCTGCATGCTCA
AGGCGAAAGGAGAAAACAGGCTTGCCAAAGATTGAGGTGTGTGGACAATG
CTCGGGTACCTACCTCTCCGGCCCTGGACTGGGAGACGAATCCACAGAGA
AACCCCACAACAACTTCGTCCCGCTGTTTCGTGTCTGCCGCTTCCGCTTG
TTGTGCTTCCGCTGGTTGTGCTTCGTCCCTGATCACCGCCATGAAGGTAG
TGTCGCAGAAATTATCGAAGAAAAGCCGGGGCAGCATCGGCGACATTCGT
CTTCCCCCCCACCAAGCGTCGACGAGGCCGATCACCGCCGAGTAGTCCTC
GCTGCCGGTACACGTCCTTACTGTGTAGCGGCGGTTGCACGTGTCAACGC
CCTGTGAAGAGCACATCATCATGATCGATTCCTGAGCAGGACTCCGCGAA
CGCCGCTGCTGCCTGAGATTCGCTTTTCGCTGCCGGACTGCGGATATGCT
TGGACTAAAGGCGCCGATATATGCCACAGTCAGCCAGCACAAGCACAGCA
GGAGCGCAGTGGAGGTCATGTCAGCACAACATGTCCCGCCCGCTGCTTTT
CCCAAGTGATTTTGACATTTTCGTCCTCACCCCCTGTCTGGAGACCGTAG
TAAAGGATTTTCATTGGTCAACGTCTTCGGGCAATGCTTGGATCGCAGGG
AGAGAGCGCGCGCGCGATGACAGATCGACAGGAGCACTTCCGCCAGGGTT
GCGCAAGAGGTCGTGAGGCACGCATCCCCTTGCACCCCCGCCCTGCGAGG
TGAGTGTGCCCGTCAACGTGTACAGCAGTAATTTAACACAGCAGCAATCA
CACGCACCTCATGGAGATCAAGCGGGACTGTCAGAGTTTTTACGTGTGAG
ATGTGAGAGCACAACTACAGCAGTCCACATGTTTAGACGACACCACCAGC
TGATGAGCGCAGCCCATCCGTCAAGCACGACGGCACGCCATTTCCTGATG
CGGCATTGTCACACTACTGCTGTGTTGGCTTCACACTGCTATACAGTTAA
GTGTTTGCTGCTAGTGTGCGTGCTTCTAAGGTTTGGGCATCGCAGTTACC
TGGCACCAGCGCCCGCCGCCCAATTAATTGAGGATGGATTTGACATGAGC
TTGTATGCCATCATGTGCCATATGTGTCATGTGCAATGTGGAAGGCTCTC
TACAAGTATGTTATTGTTATTTTCAGATTGTTGGCGCTTCGTGCGATCGC
CGAAGTGACGAAGGTCAAATCAAATAATGTGTAGAGTGATGGTGCTAAAG
ACGACAGACTTTACAAATGAGGCCACGTAGATGAGAAAAGACGAGCAACT
TACAGCAGTAGTAGCTCCCGAAGTGGCTGAAGGCGGGATGTTGAGGGAGT
GGAAGAATTGACAGGGAAGAGGGCTGACGCCGGCATTTTCAAGGCGAGAA
TCGGAATAATTCCGACTTATAGCCAGTGTGAACCCCTGCATCCATACATC
GGCTTGTAGCGAGTACCAGAATAAGTCGCGAACGCATCCATCTGGAGAGA
AACGCAGCTGCAGTGCGCATTGTGAGGGTAAGGCGCAGGAAGATTCCGAT
ACACACGGTTGCGGGAGTAGAGGGGTTGGTTGTGGGGTGATGCGCAGGTG
CATCTTTCAAGAGACAGAGGTGGAAGGTGGTGTTGCACAACCTGGTATTT
TGTCAGAACGATTACAAAGAAAGATCTACGTAAGCACATCAAGGAAGAAA
ATGTAAGATGGGGAAGGTATTACGGAATAGAAAAAGGAAGAAGGTCGAGA
ATAATAAAAGGAGATTGACTCTTGTCCACGACAGAAGCATCCGAACGGAT
CAAGACCAGCAAACGGGGAGGAGTAGAGGTGGGCCAGAGGGAGGGATAGC
AGTACAGATGAATAAGAAGGAAGCGGAGAGAGAACACAAAGAAAGAGAGC
AGGAGCATTGTCGGTTCTTTTGTTCTTTCCGATACTTGCGGGAGTAGAGG
GGTGGCTTGCGGGGTGTTGCGCAGGCGCGTCCGCCAAGAGAAACAAAGAG
ACAGAGAGACAGCGAGACAGAGAGACAGCGAGACAGAGAGACCGGAATTC
CGAGAAGAAAATGAAAGGAAAAAAATGCTACGCTGTGAGGGGTCGACAGA
AGGACTGAGAGGCCAGGAAGAAACAACTTGCTGGACGGAGAACCCAAAAG
TGAAAGTATGTCCATGAAGCTGGCTTCCTGTCAACGACACCTCCTCAATT
CTATCCTACGGTTCTTATTCGTCTTGAGGGAATGGGATCTGCACTCGCCC
CTTGTGAAAGCACGTTCTTATTGACGAAGGCTGAGGACCCGCTGGATGCA
CCAATGAGGGATCCTGAAGTACCACCCACAACCGTGAAAAACATCGTCCC
GGCTTCAGCTCCAACGGCCCCAGTTTCACCCAATTGGACTCAGCTGTCAG
ACGGTCTACGAGCTCTCATCTCTACCACGGATTCTCTTCCAATCAATGTT
GTCCCCCTGCGATACTCGTCTATGCATCATAAGCCACTTCAGCTGCATGG
ACAAAAGCTCAAGCGCAGTATCGAGAATGGCAGCATTCGGGGGCTCCGAT
ACAATGCCAGCAACCAAACTGTAGAGCTCGAGGAGACGCCAATTGCAAGC
GTGAGGGAAGCTAAAGCACCTGTCCAAACCACGGGCAAGACAACCCCAAC
GACAAAAAAAGCAGCTGCAGCCAAGACAGCCCCGTCAAACCCTGGCTCGC
CCGATTGGACGCACCTCTCAAGAAGCCTACAAGCGCTGGCAATCGCCAAA
GGGCCACTCTCACTCTCTGAAGTCGGCCAGGCGTACAAGTCCAAGTATAA
CAATACTCTCGACTTGCGTGGCCACGATCTGAGAGCCAGTCTCGTCAGTG
GTGACCTGCAGGGGGTTCGATACAACGCGAGCACCGGTAAGCTCGAGATC
GATGCCACGCGGGGGGGGGCTACCCGGACAACGAAATCGCCAGCCGCACT
CCAGCCGGCAAAGCAGCGAACCCGAAAAGAAACTGCCGCAGCAAAGAGCC
ATGCTGCCGTCGAGGGTCAGACGCGACCCGACTCGGACTTTAGCGAACGC
CAACGATCGGCGCCGGTCACAGAGGAGACTTCCGCCCCGACCCAACCCCC
CTACCTCCTGATCGACAGCTCGAGTTCTTACAATACGGCACTGGCTACCC
TTTCTCTCGACGGAGCTCTCGGTCGCACCTTGCAGCAGGTCTGCATGGGG
AGCATGGTAGTAGTGCACCTCAGCGGGCGCCAGCTTGGGTCTGAACACGG
ATCTATTTCGCTCATCAAGGTATGCTCTCAAGATATGCATGCTCTTTGGA
GTTGTTTGTTGAGGAGGTCGTGAACCGGGTTTGCAGCATGAAGGACAGTA
GTGTTCTCCCCTGTCACATGGTCCCATGGCTCCACACGCTTGAATCCTGC
AGGTTCCGTACATCTGTTTGCCACGTCAACACGGAAGGCGTGGCAGGCTG
AAGTGGTGAAAAGGTGTCAAGACTAGCTTTGAAGGCATCCCCCGGTTGTT
ACGACCACGTCATTTTTCGTGTTTTTCTCTCCGGCCCTTTGTTTTTCGAG
AACGATTTGAAAGCACCTGCCAACTAGCTGTTCGCCTTCCCAACACCCAC
GGATATCTTGAGACAGAAGACTGCAAACAGCCGTATGCTTACCTACCCTG
CTACGCCTGTGCCCAAACGTCCTGTTTTCTGAAACTCCAGGTCGTGGGAA
AAATATCGCGTCCGCCGGTCCTCTTTGACGTTGTGGAGCTCAGCAAGACT
AAGACTCGCCAGAACTTGTTGCTCAATAAGCTGTCCCCGCTGTTCGCAGA
CCAGCGGTCGACAAAGGTGAGTGTATGTTGCTGGCAGTCTACGTCAGTAA
GGCTTGCGTCGAAGGAAGACACCACCAATGAGAGAACCATCGATTGCCAC
TTGTGCGCATGGTGCCGTCCCTCGGGGAGGGGGGCGTATTCATGTTTTGC
TTGCCACGCTTCCTCGAGAGGACGGGGCATTGTCCCCACAGGACCGACCA
CCGATGGCCAATCGTTTTGCCAAAGGTGGCTCAAAAATGTCAGCTTCCCT
AGTCTGTCGTTCCTAACGATATCCCTTCCCGCCTTTTCAAACCACTTCCT
ACTCCCCAGTACAGCTACCGTCCTCTCCTCTCCATTCCATGCCTCAAACA
TCTCCCTGTACCTCCCCTTGTATTTCTCCCAGCTTAGTCATGTACACTTC
CCTCTCCTTATTGTACAGCCGACATTCCGCGACTACATGAACACGGTCTT
CGCATTCAAAGCCGCAATCACATTTGAACTTGTCGTCTTCGTCGTCTCCC
GTCCTATATATTCGTCGACGTTCTCGAAGGCCTATGTCCCCGGTCCTGAA
TTTGACCCTAAGCTTTGTCCCTGCATCCATTGGTCCATGTAGGTAATCCT
TGAACCCTATTCCTTCTTTCAACATTCCGTACACTTCTAGACCCTCCTTA
TCCTGGGTTTTTTTCCTTAGATTCTGTTCTTATCTCTCGGCAGAAGCAAC
AGATATCTTCTCCTTGAACCCCTGTAGACCCTCCGTTTCCAGTGTTTCAT
CTTCATCGATGTCGAACCCCTTCCATACGTCCTCTACAACCTTGACCCAT
TCCGTGGGTTGTCTACCCCCTCTTTTTGTTTGCCCACTTCGCCTCCCATA
CTATTCTCGGCAACCTCTCCTCTCCCATCCCGCACATGCGATACTGCCAT
GTCAGCTTCCTTACGTCTCTTCCCGACCGTAGGGATGGGATCCCCAATTC
TGCCCTGACGGCTGCATTACTTGTGCGCTTGGAGCATCCTAGGATGATTT
TCGCTGCTTTCATCTGCGCCGCCTCGAGTTATTTCACTACCTTCTTATTT
CCTTCCCATAGTTCTCCGGCGTACTCTAGCGGCGGTACGATTACACTCTT
CAACACCGTCAATGTGATGCGTGTATCGAGGTGCCGGTTTGCGAGTATTG
GGTGCAGCTTCCCTGCTCGTGCTTTGCCCTTTCCGCTACCTTGGACATGT
GTGCATTCCACGAGCAGACTTTTGCGATCTCTACTCCGAGGTATGTGTAC
TGGTCCACTACTGCAATCTCCTCGATCCCCCACTTCCATCTATGTTCTAC
TGGTTCCTCCCTGTCCTCGTTGCATACCATGACGGCACTCTTCTTAACGT
TGGCAGACAACCTCCAACAAGTATCAGTAAACTTCTTCGCCGCGTCAATT
TGCAGTTGCAGTCCCTCAGGAGTGTCCGACATACCAACAAAATCATCCGC
AAACAGCATTCCTGACACCGAAGTTTCCGTGTCCCCTACTTGTACTCCCT
TCCGGACTGCCTCTACGACTTCCAACAGATCTTTGATGAACACCTGGAAC
AATGTTGGGGACAGCGTGCAATCTTGTGGGACCCCCTGCTCAGTGTCGAA
GAATTTAGACAGTTCTCCGTCTAGCATGACCGCGCTTTTCGTACACTAGG
TCATCTTCTTCAGCACTCTCTACATTTTCCCTTTGATCCCGTACTTGGAC
AATTGTTTCCACAGCCCATTTCTCCATACGGTATCGTATGCCTTTTTCAC
GTCCAGGAAGAAGCAGAACGTCGGCTTTCCCGCCCTCTTTCTACCTTGGA
TGATGTTCCCTACTGTGAATGCGTGGTCTACACCCCCCCTCTTCTGTCGG
AAACCTGCCTGGCCCTCACTAATGCTACGTTCCTTCTCCAATACTCCCAC
TAACCTATCGTTCAGCGGCTTACAGAACACGTTTCCTACTGTGTTCAACA
GTGTGAGACCCCTGTAGTTTCCTGGGCCAGTCTTTTCTCCTTTCTTAAAC
AAGTTCACAACCACTCCTTCCCTCCATCTACTTGGCGCATACTCGTTTTT
TCACACCCAGTTGTACAGCAGTACCATTAGCTGGATCATCCCCTTCCCCC
CAAACTTCATGAACTCGTTGACTATCCCATCCGCCCCTGCTGCTTTGTGG
CACTGCAGCTTGGTCACACAGGCGTCAACCTCGTCCTCAGTGAACTCCTT
TTCTAGTTCTACGTTCCCAACGTCTGCCTTCGATGCCTCTTCTTCTTTCT
GGGCCCATGCGTCCACCTCCTTCTTAAACACTTGGTCAAAAGCTTCATTC
TCCGAAGGTACTCCAAGTGTCTTGTAGTGTCCTGCTAGAACTTCCCTTTT
TCCCTTCCCCACTGCTGACTAGTCCACCGTTCACACCTCGCAAAGTTGCT
ACCCCTGTATCCCCCCCTTGCGCGGTCTTTTTTACCATCCCACTAATCCC
TTCCCACATCTGCTTGACGTTCCCCTCCAGGCCTCCGTTGGCCTTCTGCA
CTACTTCGTCCCAATGCACTTTTTCTTCTTTTTCACTAGTCCCTTCACCT
GTTTCCTCTTGGCCCTGTACTTTTCCCAACTCTCCTCAGACCCCTCACTC
AGGTACTGCTTGAAGACTTTTCTACGTTCCCTATTTTCTTCTTTCAGCTC
GTCATCCCACCACTTAACCGATACCCCACATCGTACCACCTTCTTTCCCA
CTTCTCTCTCCGCCGTTGTGTTCACTATGGACTCCCACCATTCAATCACC
CTGCCCCCTGCTGCTTGTACGTCTACCTGTCCGTCTTCGACGCTTCTCAG
CAGTTTCCTGAAGGGTTCTACACTATCAGCCAGTCCCTTCTAGAATCCAT
CCCGTGTCCCCTCGTCTCCCAAACGCTCTACTTTCCACCGAAACACTTTC
CTCTGTTTCTTACTCTCCACCATTCTAGATCGGTCGATGGTTGCCCATAT
GAGGAAGTGGTCGGTCGAACCTATATCTATCGCACTTACGTGGAGCTCTG
GGATCTGTGTGCTCAACCTATCTACCAGGATGTAGTCGAGGATCGAGTAT
TCATTGCAAACTGCCCTTTGCCTGGTGAACTCCGACTTATCGCATTCCCT
CCTACCGTTCAACACCATCAGCTCGTTGCTTCCCAAGAATTCAAGCATCC
TCACTCCATTGCCATTCACTTTGTCTTCTCCGTGCTGCCCGATCGCCTGT
CCTCTACTGGAAGCTTTCCCTATTCTGGAGTTGAAATCGCCCACCATGAC
AACTTCTCCCTTCCTACTGAACCTCTGGACATGTTCCCCAATTTGTCCAA
CGTTCTCCTGCACCTTGCTTGCGACTTTCGACGACGGTGGGACGTGTACG
TTCCCTAGAAACAAATCTTTCTCACCCCGCTCCCCAGGTATCTTGAGCCA
TAGGCTTTCCTCGAACTCCGTTTTCACCACTACTTGCACCACGTCAAACA
AGTGTTCCTTGACCAGGAATCCAACTCCCCCCTCCCCCCTTTTCTTCGGG
TCTAAGCCCTTTCTTGCCTTCCCTACCCACCGGCATTTCCCTAGTTTGCT
TACCACGTCCCCATCGTTCAATTCTCACGTCTCTTGGATCCCCACTACAT
CTAGATCGCTTTGTTCTAGTTGGTCCACGTTTTCCAACCGCTTGCGCTCA
CTCCTTGCGAACCCGCACACGTTCCACGACCCCACTCTCAGCTTGTGTTT
TTCCCTATTGGAGATTTTGCGCACTCTATCGTTCGCCTTCCTCTTCTGTT
TCTTGGCGTTCTTCTGACTTGCCTGCTCGCCTCCCCCGCCCGGTCCCTTC
TTTGCCTCCATCGCCCTCGCCTCTTGTCTCCTTACCTTCTCTGTTTTCTG
TCATGTTCGCGATGCAAACCCTCCATTCAAACTTCCTTACGTAGTTCGAC
AGCTTCTCGATGTCAACCCCCAAGCACTCTTGGCTGTCTCCCTTGGTCAA
TTTCACCGGAAATGTTCATGCTCTCTGCCTACGTCTCCCCTTGCTAGGCA
GTGCAGTCCCTCCCTGTCACAACAGTTCTTGAACTCTATCCTCGTCATGT
CCCTTGGAATCCCAAGCAGCAGCAGCTCCAACCTGTCTCCCACAGTTTCT
GCTTCCATCCTCCCGGCTTCTTCACCATCCTCATGATCTCTACAGCAACT
GGACCGCGGCCACTTGTTTTTCGTGTTTTTTCAGGAAGGTATACGGAATA
CTCGGCCTTCCCAATCCGAGTGCCCGGTGGGGGTTGTGGTTCCTTTCAGT
TCTTTTGCCGGCTCACCGACGCTAAACAGCGCCTCCAACATAGGCTCCCA
CCACGAAAAAACTGCGGAGCTAGATGTGCGGCACGCACAATGCATTGTTT
TCGATTGGAGAGAGGCGAGTACAAAGCAGCAAGGAATTGTCGGCCAAACT
TTCGGCAGACAGGTCTACTCGGGAGCGCAAGTGGGGTAGCAACCCATATT
GGAGCGTACATGAGAAGCTGGACGTTGGTGTACGCTCCATGCCGGCGTGT
GAGTAGGATCTTAGGATATGCAAGTCGTCCCTGAACTTTTTGTGGTGAGC
ATGACCCCCCGGGAGGAAAGTAGCTTGTACCGCGGGACTTCGGAGATGAT
AAATTGGGTGGTCGGGGGACGTCTGGGAGTTTACTAAGCAGAACGCCCGG
CACAAGACTGGGGTACTTGTCCCAGGAGGTGTGAACTTGGATCTAGACTA
CAAGCCTATGTTGGGGGGGGGGGGTACTCATAATGGTGCATGCCGTAGTT
GTTATACCGTTGACCTCGCATCCCTGCAAAGCCAGGACGGAGCACGCCGA
GTTCTCACCGGACCAGGCTCTCACATCACCAAGAGCGAAGCGCCGTGAGG
TATTCGGCGAGTCGCATGAAGGGTGCGCTGCATCGTGCTAAGGGTGTTGG
GGCCTCTTGTGCTTACTTCCTTGCGTACGGATGACAGCTGCGTATGACTG
AATTTATTTTCTGGTGCTTTCACTTCCAGAGACAGTTATAAGCACTGTGT
AACTGCCTCGAGGGTGCTTGACCAATTGAACACAACGTGGTACGAATATC
CCCTTTGCGCGGAATGAGGGTTCTCCCCGCACAACATAGTCTACTCGACC
ACCATTTATGGTTACCGCAACAAGAAAAACAGGAGCAAAAAAAATAGCGG
CAACCTGGTTGCCGAGCTCGCGAAGTGATCGGCTTGTTTTACAACGTCGT
TGCCAAGCGACGAAAACCCAACCCCGATGGCAAACACCGGGGGTGGGGGG
CATCCCTCGGGGGGGATGTCTAATCGATATTGAAACTCCATAGTTCTCTG
GCCCTCCATGCTTGCTTGTAAGGAGCCCATCCATGTCCGTCAATGGTGTT
TGGGGGGGTAAAATTTACATCAGTGTGGTTCAATAATAAGAGATTCGATT
CTTCGACGACGCAGGTGGTGTACGACTTCAGCAACAGCGCGATTGCCTTG
CGGCGTCAGTTTGGCGCGGGGTTCACGATTGGTAGAATCCTGGACCTCCA
GCTGGCCTTTGAAGCTCTCCACGGGCGCTTCGGTGCGGATGTCGTGACAG
TCTTGAGAGCTTTCGGGCAGCAGGTTTCCTACAGCGACGCCGCCTTCAGG
TGCCGATTGCGTCCCACTGCTCTATTTATGCCGCCGGGACCGCTTGCTGT
TCCCCTCCGCTCGGTTAACTGGCGTCGGTTTTGGTTGTCGCGCTGCGGAA
GGTGCCACTTTCCCCTTTCTACATCCCTATTTTTCCCGGTGTCGCTTATA
ATTCGGAAGGTGGGGAAGTTTTGATACTGTACGGCACCGTGCGCGCATCG
CTGGACGCACGTCACGTTTGACATAGTCGTACACGGCGCTGTGCGTGCAT
GCGAATGCGTTGCGATACATGTTGCGTTGTCAGAGCGCGACAACTTTAGG
CAATAATCATACGTCGTGGTCAAGAGCTCTTCTGCGTAGAGATTGAGGCA
AAGTAGGACATTGTTATTTAGTTTCCACCTGCGGTTTGCTCATTGGCAAG
AAAGTGGTTGTTTTGGCGCGAGTTCACGTCCACAGCTTAATGTTTCCTCC
TCGCTTTTATTTTCCGCGCGACGGCATCGTACCACGTGTTGCAGGGCACT
CAGCTGTGAAGAAGCGTCAACCATGAGGCGACCTATTGACACGACAACAT
TGGGCTTGGCGGCACAGCCAGTCTTATCGCTTGCCAAGGTGTGCCAGTAA
CGTTGAAATCCGCTGCTTTCAGAATGAGCAGGAATCGATTCTCGAAGTCA
ACCAGTGCTCTTTAACTTGACGCCCCATGTGCTGCAGCATACAATGTACG
CAAGGCGGTTGGTAGATGTAGAATCAATTTTCTCGGATGTTTGTCGTTGT
TCTGTCTTTGCGGCCAGGTCACGGAAAGCGCCGTCTTGAGTCTGTCCAAG
AAAAGGCAAAAGGACATCGTGCTGGAAGCTTCTCAGGTCCGGAACAATCT
TCATGCTAACTACAAACACCAGCGTAAGCTGTGCGGTGAATCTTGCAGAC
TTACGACACAATGGCAGCAGGATGAGTGTATATTAAACAGTTAAACGGTA
TCCCTTTGCACGACAACGCAGATGGAGTTATATTGTAGTCGCTGGACGAA
GGACATGCCGCAAATACTCTGTAGTCACCGTAGGTTGACGCGAAACCACT
AATAATTCACACATACCCCCCACCCTTACTTTCCAGCGGACGACAGAGTT
CGCCATGTCCTCCTGGAGCCAAGACACGCGGAGGATGGCGTTTCGCAACC
ACGGTTCTTGCTGGGGAGGCGGGGTCGGGAGAATTCTGACCAGCTTCGAG
CTCAAGCACGTATCTGCTTTCCCGGAAAACATCGTGTATGGTTTCTTCAG
GCTTAAGGTTTACATATGTCCAATGCGACCTACGCTGTATAATGGCAGCA
AGGCCACGTTCTCTACAGGTGCTCTTGGCCGCAAATACTCGAACGCTTCA
ACCCTCAACGTGCCTCGGCCGTTCGTTGTCTAATGGTCTCGTCAGGCCAG
AGAGAAGGTCGGGCTATCGGCTCCTTCGGGACAGGCGCTGTCCTCGAACG
CGACACCGGCTGTCATCGGCGACAACGACCCCACGTACGTCCCATTGTCG
GGCCTAGAATTGGGGGAGCAGCTTCGCGTCCGATGCAAAATGTAGCGAGT
TTGAGCTACAGCACGTAGTCGGAGAAGAAACGTAGCCCCACGACCGTGCC
ATTCTTTGAATATAACTGGGTGGACGCATGCCTAGTGTTGTCGGTACATG
GCACGATTAGAAAATGGCAGCATTTATTTGTTCGGCTGTGGCACAAGTAT
CGGCCTGGAGGCTTATGAATGGACTACGCTTGCTAACCTCTCTTCGTCCC
CCTTGCAAAGCCCTGATTGCTGAACTGGGTATTACCCTTGTTACTGTAGT
GTTAGGTCGGCCCTTGACAGCTTGGAGCAGAATGATGGCGTGGAGCGAGA
TCCCAACTCTCCCCACGAGATTCTGGAACTTATTCCTGAAGACTTTCTCG
AAGAACACCTGACAGAAAGGTGAGCGGCGCGTGATGTTGGAGAGAGTCAC
GTAGATTCGGCACGGAGCTTGTATTTTGTACGTTGGGGCTGACATGTGGC
TCCGGCTAGATGCGACAGCTGGCAGCGTGCCCCATGTACATGTTCCGGTC
GGCTAGGCTATGTCTCTCCCCCGTGTTCGTCAAAGCGAAAACCACATACC
ACGATGGGCCTTTGATGTTCGCTTCTCACGAACAACACGCAACAACGCCG
CGTTGGATTCAAAACACCACGGCGCCTCCAAACCTCGTGAAAGTTGTCCA
CATGCACCAGAGCTAGGGCGCACGGCCTTGGTAAGGAACTACATTTGTCC
TTGTGGATTCGTTTGGTGGGTTATCTTATCAAGCTCGTTTGCCCCACTGA
TTCTACGAAACATGTGGAGAGCATTTTACGTGTGTGGTAGTACACGCTGA
AGCATTAAACCTCGCCAATTGTGAATATTCCATGCCCAGGCACGTGCAGA
ACGTACAGGATCTGAACGAGCTCGTTCTCGACGAAGGAAGGAGGCCCTAC
GCCACTCTGCAAGGTATGGGTTCGAGTACAGACCTGATGCGCGCAGCATC
TAAGAGGCTTCTCTAGCCGACGTGGCAATGACAATAGACCCTTCTCTTCA
ACGCTGGTTATCAAGACCATTAAAAGGGTGGAGCCCCCTTTCCACCCTTT
CTGATTCCTAGGCACTATTGTTGTTGTCCATCTTGAATGCAAAACGCGAG
CCCTTCTCTGAGCGCGTGGTGGACAAGTACACAATACCCAATGTGTGTTC
ATTCAAGCAAAGGTTTTCTTCGAACAATCACGGCCGTTTCCTTTCCTCAC
GGCCGCCTGCATGCTCTCTCCCTCTCTCTCTCTACGCTCAGGGCGCGGAA
AGCTGTTCCTCTGCAGCGACAAGAGTGTGGTCGTGACCAAAGAACACATC
GACATGGTCGTTGGGCGGCTCGACCTCGAGGGCAAGTTCGCGGGCGACAA
CCGAGCGGGCGTCCCGGGACAGCTGCACCGCATCAGCGTCATGAGGGGCA
GGGAGGTAACGATCCAGGAGGCCGCTTTCGAGCGCCCAGCCGAAATCAAG
GCCTGCTGCTCGTCCAATTGTTCTTTCTCGGCATTCGAAACGAATTTCCA
ATCGTGTGTTAAAGCGCCGCTGGTGGAGTGCGTGCGCCGCGTAACAGTAC
TGTTGATGATATGGCGGAACGGTTGGCTTGTGGACAAGTGTTGTGTTCGG
CCGATGGCGTGCGCTCTTGTAGGCATGTACGTGGCAGGCGCCCTTCGTGA
CTAAGCGCGTCCGTTTGTTCTCGGGGCTGAAACTTGCGTCGTTGAGTCAA
AGTCCGTAGAATAGAAGAAACGCGTTTTCAAGCGGTTTTTTGTGTGTGCT
CGTGTGTTGTGACCGTATGGTATACAGGGCAGGCGGATCTTCGGCGTGAC
TCTGCGGATTGGCCGTTACTTCCCGGGTAGTGCAGGCTTGGTCGACGACC
TGCTCTTCCACGTGCAGGGCAGCCCCGGTGAGAGTACACTTGTACATCCC
ATCAACGTTTGCTGAGTGGACACTACAGTGTTGCCTTTGAGACTCTGGCC
CCCGGTCCGCCTTGTGGTGTAACGACGCTGCGAGTGTCGCACGAGTGTGC
CGCAGTCCTCCAACCAGGGCATACTACGCGTCGTTGGCGGCCAGAGTGTA
GTTGAACCAGGGATACGTTTGAAGCATATAGCAAAGAGCCAGCCGCCCGC
GAAGGCTCTGACCAGCCTAAGTCTCCGAGAAAGTCGCGAGCAACACCTAC
CCTTTACGCTATAAAACTTGCACTGATGAAAATCGCATATTCTGCCCGAA
TTTGCGCATTCGCACGCCCTTACCCGCAACCACGCGAACATTGGCCACCG
CCGCTCTTCTCCGTCACATCAGACAAGCCCGAGCGTGCCGCTTCTGTCCT
TGTGCTGGGCAAGCCAGGGTGTGGCAAGACCACCGTCCTTCGCGACATCT
GCCGAAAGATCTCCCAGGAGCAGGTGACAAATGCTCTACCAACTGTTGTT
GCCGTCTGTTGGACACGCACACACCCCATGGAGAAGGCTTGGCTTTTGCC
TCGTTCTTGCTCCAGTGACGAAACCACACTCGCACACCAGACATGCGTCA
AGATGCGGGACAGACGTTCTGGGAGATGTTGTTTGTTTTGTAGCAGCGAG
CTTTGTATTCGCCCTAGCCGGAAGTGTACCGTCTACTTCATCCCCTGGTT
AGGCCGTGAACGATCTGATGAATCTGACTTGAGTCCACGCTCTCTATTGA
CGCTGCCTGCGCCATGGTCAGACCGTGGTGATTGTGGACACGAGCAACGA
GATTGCCGGCGACGGCCACATCCCTCACCTCGCGGCCATCGGACAGAGCC
GGAGGATGATGGTTCCGGACAAGACAGACCAGCACAAGTACGCCTTGCTT
CCTCTTCCTCACACGCGGGACTCGCGCGTCGCGCTGCTGGTCGCCGCGGG
TCAATCACGATGTCGTCGGTCCTTCTTGTTGGTGTAGCTGCCCTTGTTTC
GAGGGGCGAGACAGACAGGTTCCAACAGCCAGCCTATCTACACACAGTCA
CACATCACTTACTGTTTCTAAGTATTGACCGACGTGACTCCAGAGACATT
TCTCCGCATCCCTGTTATTGGCGTCCTGCCATACGTTGGGTTGGATGCGC
CGATGTGCGTAAATGTCCGGGTCTTTACTGACTCGCTTGCATCGAAAGGG
ACGACGATTCGGGGTGCAAGGTAGTGAGTGAAGGTGCGATCATTCTGTGG
GTGGGTGTAGCTGTGCCACCGCGTTCATGAGGAATATCTTTCCGTTGTTG
AAAAGGAGGAAATTCGGGTCTCATGTTGTTGTTCGCTCGTACTCACCGCC
ACTTCTTCTTGAACGTACGTGTGTGCGAACAGGGTTGTACAGCGCGGTAT
TCCGCTCACGTGCTCGTTCTGCCTTTCCCTTGTGTGCGTTGGTTTCTTTC
TATTACCCTGGTGTGTACAAATCAGCGTGATGAAAGAGGCGCTTCAGAAC
CACACGCCCCAGACGATTGTGGTGGATGAGGTATCCAACAAGAACGAGGC
TAGGGCATGCTTGGACATCAAGGCTCGGTAAGGCGCCCTGAGATGTAGCA
TCCATTGATGTGGAGAACATTTTGGTACCTTTGACGTTGCCCAACCTTCT
TCAATCGAATCAATGAGTGAGTGACACTCCTGTACACCACACTCCTGCAC
ACCACCCTTCTGGCTTGGCGTTGCGAAATCAATACGTGTCTTGGCACACC
CGGGTAGCAGAACAGGCAAGGGCTACCGGCTAGACTACCGGAGACGTACA
ATACTCGCCTGTGGGTAAAGAGGGAGCATGAAAACCTTCTTTTTCCCTCC
TTCTTACGGAACGCTCTGTCGCTCCCAGAGGCGTCCGTGTGGTGGCGAGT
GCCCACGGAGACTTGCAATCGCTGCTCGAGAACCCGGAACTCAACACTCT
GGTCGGAGGCACGACAAGCGTAACCCTAGGTGATGCGATGGCCATCGCTA
CCAACGCGGGAAACAAGGTGCGACAACGCGAAGGAGCTAAGCACGCATGG
CGGGACCGGCCTTACACCCGATAACAGGAACACTAGCCCGCCACTCGAAC
GATCCACTCTGTGTAGTCGGGTATGTTGAGGGTATTGCTGGCTGGTAAAA
CGTTGAGTGTATCGTTGGCGAGCGTGGGGGGAGCAAGGCAATCGCGTTTC
ACGAAACAAATGCTCCTTGCCGACCATACGTTTTGTTGTTGGGCCGAAAG
GCTACGAGTGGGGATGTCTTTGCAAGCGCCAGCTAAGGTACGGGACCGTG
GCTGGCAAAAGAGATCGCGAAACTTTTTCGATACATGTGGGTCTTTAGGC
TGACCTGACATTGCGTCCGATCGATACCACGGCCAGGAGGTGAAATTTCT
TGTCTCTTCTCTATGTAGTCAGCGTCACTGAGTTACGATCAGCAACGCTT
TGCCCAAACGTATGGAAGCCATGGGAACATCGTAATAGTATGGTCTTGCA
TGTGCGGCTAACACAGGTCCAGAGGCAGCGAGCCGGTGCACCGATCTTTG
ACACGATCGTAGAGCTAGAGCGGGGGCAAGTGAACAAGTGGACCATCGTG
TGGAATGTCGACCTCGCTGTGGACGCTATCCTGAGCGGGAAGCCGTACAA
GGTGTCGCAGAGAACCCGCATCCCGAATGACTCGGGCCTCCAACAAGCGG
TGAGCGCATCGTAGGTGTAAACCCACGTGGTTGACAGTCCTTCGCGCTGC
TGGTATGAAGGAATGCCTCTGAAACGAGTGATTGCTATGCAAATCAAGAA
GATTGTTGGCACCGAGACCACTAACATGGTGACACACACCAACAGCCGAA
CATACTATTAACTGTGGAACGAAGAGGCGGGCTCCACCTGTGTTCTCTCA
GCTGGGTACTGTTGTGCTGCTTTCTTTTTCACCTTCAACGCCCTTCTCAA
TGGGAAAGAAAACATTTTTTTCCTTGCTCAGAAGCTCACCAGGAATACGG
TAACACACATGAATAAGATTCAGAGTCGGCACGTTTCTTCGCTCACTGGT
CACCACCCGAGTCACCTAACTGGATACTGAGCCTGTACCCTCCTCGAGAG
TTCTGTCTGGTTGCGTGCTGCCGGGCGTGTTGGCGTGTCTGGGTCTATGG
TACCGATTTTCCACCAGGTTGCGAACTAATTCCACGTGCTCATATACCTC
GAGCTTCCCCACGCACACCTCTCCCTTCCACTCTTTGCCCAGGGTGCTGA
CCACGAAGATGCGGCTTTCCTTCTCAAGCACGCCTACGCGATGGAACAGA
CCAAGCAGTACTACTGATTGGAAGTCGTTCGCGGGGCGGTGAAAAGGGTA
TAATGGTCCTTGAACTTGAGTCTTTGATGCCAAGGTACTGTAGACCATGG
ATACGTACACCAGCCTTGGCAGAGATGAGACAGGTTTTTGGAGTACGCTG
GCGTGTGTCCGATTTTGTGTGTCTGAATTGCGAGCCCCCGTTGATTTGCA
AACTGCCAGAGGCAGAGCTTAGTGTGAGCTGATGATGCATGGCTGTCCAG
TATAGAACGGAGGGATTCGGTCGGGACTTTCGATCGATGAAGCGTAGCTT
GAAGGTGTGTATTCGTTGTAGAGATAACGTTTAAGGTCTCACACGAATGA
TGCCATCGGAGTGGGTACCACAATGTTACAAATATTGATCCTGAAATGTG
TTGAGACTGAATGTGTTGAACTGACGAAATAAAAAGAATTTGATAACGCG
ATCTCTCACAGGGATGGGGGGGGAGGTGAATCGAAAGCAGTTTGTCCGAC
GACGACGAGAGTAGTGCGAATGTTTGTTTTATTCCCCGTTCGACAACGAG
AGGCGTTCTCAGACGTGTGCCTTCGACCTACTCTAGTTTTATTGACAGTT
GCCATCTTGCAGGGCTCGCTGTTTTATGTACGTCCCACGAAAATCACCTA
GAGGTGTAGACCAAACCCAGGGGTCCAGCGTGGAGGAGATTATCAAACAC
AGAACAACGATAAGGATCATTCGAGTTTCGAGAGCTGAACATTCGAACAA
GTGGGACTCCGAGAATTCCCGCAG
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Coding sequence (CDS) from alignment at chr_28:436391..453364+

>Ec-28_000420.5 ID=Ec-28_000420.5|Name=Ec-28_000420.5|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=531bp|location=Sequence derived from alignment at chr_28:436391..453364+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGATGGTTCCGGACAAGACAGACCAGCACAACGTGATGAAAGAGGCGCT
TCAGAACCACACGCCCCAGACGATTGTGGTGGATGAGGTATCCAACAAGA
ACGAGGCTAGGGCATGCTTGGACATCAAGGCTCGAGGCGTCCGTGTGGTG
GCGAGTGCCCACGGAGACTTGCAATCGCTGCTCGAGAACCCGGAACTCAA
CACTCTGGTCGGAGGCACGACAAGCGTAACCCTAGGTGATGCGATGGCCA
TCGCTACCAACGCGGGAAACAAGGTCCAGAGGCAGCGAGCCGGTGCACCG
ATCTTTGACACGATCGTAGAGCTAGAGCGGGGGCAAGTGAACAAGTGGAC
CATCGTGTGGAATGTCGACCTCGCTGTGGACGCTATCCTGAGCGGGAAGC
CGTACAAGGTGTCGCAGAGAACCCGCATCCCGAATGACTCGGGCCTCCAA
CAAGCGGGTGCTGACCACGAAGATGCGGCTTTCCTTCTCAAGCACGCCTA
CGCGATGGAACAGACCAAGCAGTACTACTGA
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Synonyms
The feature 'Ec-28_000420.5' has the following synonyms
Synonym
Esi0120_0074
Esi_0120_0074