Ec-28_000340.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-28_000340.1
Unique Name	Ec-28_000340.1
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	448

Homology

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BLAST of Ec-28_000340.1 vs. uniprot
Match: D7FIH9_ECTSI (Sof1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIH9_ECTSI)

HSP 1 Score: 902 bits (2332), Expect = 0.000e+0
Identity = 447/447 (100.00%), Postives = 447/447 (100.00%), Query Frame = 1

Query:    1 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALQSVKLDKMFAKPLVGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLSVTPDGASFLSAGDDGMVKQWELGVASDLSETPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLLASTGSSREVCLYDTRATVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRAGRSREVYHTKRMQRVFCVNFSADARFVMTGSDDTNLRIWKANASEKLGKVVPREARKQEYRDSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKERRKVDNRIKHSKAGTVETVPERKKKIVKELT 1341
            MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALQSVKLDKMFAKPLVGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLSVTPDGASFLSAGDDGMVKQWELGVASDLSETPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLLASTGSSREVCLYDTRATVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRAGRSREVYHTKRMQRVFCVNFSADARFVMTGSDDTNLRIWKANASEKLGKVVPREARKQEYRDSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKERRKVDNRIKHSKAGTVETVPERKKKIVKELT
Sbjct:    1 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALQSVKLDKMFAKPLVGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLSVTPDGASFLSAGDDGMVKQWELGVASDLSETPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLLASTGSSREVCLYDTRATVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRAGRSREVYHTKRMQRVFCVNFSADARFVMTGSDDTNLRIWKANASEKLGKVVPREARKQEYRDSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKERRKVDNRIKHSKAGTVETVPERKKKIVKELT 447

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BLAST of Ec-28_000340.1 vs. uniprot
Match: A0A836C9W7_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9W7_9STRA)

HSP 1 Score: 629 bits (1623), Expect = 1.140e-222
Identity = 303/447 (67.79%), Postives = 363/447 (81.21%), Query Frame = 1

Query:    1 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALQSVKLDKMFAKPLVGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLSVTPDGASFLSAGDDGMVKQWELGVASDLSETPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLLASTGSSREVCLYDTRATVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRAGRSREVYHTKRMQRVFCVNFSADARFVMTGSDDTNLRIWKANASEKLGKVVPREARKQEYRDSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKERRKVDNRIKHSKAGTVETVPERKKKIVKELT 1341
            MK+KTISR+EE YTRDCK D +++HRN DP LHPFEKAREY RALQ+ KLDKMFAKP +GALDGH DGVFC+A+S +NLVQFLSGACDGE+R+WDLSRR+CVW+A  H GFVRG++VTPDG SFLSAGDDG+VK+W+L +ASDL E P PTA W GK G F++LDHHW DA FATA D+V+LWD  RAEPT +++WGAD+ N VRFNPAERCLLASTGS R   LYD RA  P+RKV L+MRSN VAWNP+ P  F  A ED   YTFD+R L  AL++HKDHV AVM V+FSPTG+E A+  YDRT+R+F  R GRSREVYHT+RMQR FCV +SADAR+V++GSDDT +RIWKA ASE+LG +VPREAR+  Y D+LK+RY  MP+VRRIAKHRHVPR V+ AA AE VQRDK +RK DN  +H+K G    VPER+++++ E T
Sbjct:    1 MKIKTISRLEEHYTRDCKTDVVKIHRNLDPKLHPFEKAREYGRALQATKLDKMFAKPFIGALDGHTDGVFCTATSPKNLVQFLSGACDGEVRVWDLSRRACVWKAAAHTGFVRGVAVTPDGRSFLSAGDDGLVKRWDLAIASDLEERPRPTAQWTGKMG-FRALDHHWGDATFATASDAVELWDAERAEPTHAFRWGADAVNSVRFNPAERCLLASTGSDRGAALYDARAAAPLRKVFLRMRSNGVAWNPRVPAQFALACEDHCAYTFDVRRLGAALVVHKDHVGAVMAVAFSPTGRELATAGYDRTLRIFGARDGRSREVYHTQRMQRAFCVAYSADARYVLSGSDDTCVRIWKARASERLGAIVPREARRLRYLDTLKRRYADMPDVRRIAKHRHVPRAVRGAARAEGVQRDKAKRKADNVRRHAKDGGDAPVPERRRRVIAEQT 446

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BLAST of Ec-28_000340.1 vs. uniprot
Match: A0A024UAB8_9STRA (Sof1 domain-containing protein n=11 Tax=Aphanomyces TaxID=100860 RepID=A0A024UAB8_9STRA)

HSP 1 Score: 561 bits (1446), Expect = 1.940e-195
Identity = 274/469 (58.42%), Postives = 350/469 (74.63%), Query Frame = 1

Query:    1 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALQSVKLDKMFAKPLVGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLSVTPDGASFLSAGDDGMVKQWELGVASDLSETPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLLASTGSSREVCLYDTRATVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRAGRSREVYHTKRMQR-----------------------VFCVNFSADARFVMTGSDDTNLRIWKANASEKLGKVVPREARKQEYRDSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKERRKVDNRIKHSKAGTVETVPERKKKIVKEL 1338
            MKVKTISRVE+++T++   DR ++HRN DP LHPFE+ REYTRAL +VKLDK+FAKP VGALDGH D V C A+S ++LVQF+SGACDGEIRLWDL RR CVW   GH GFVRGL+V PDG +F S  +D  +KQW + +A++  ++PEP  T+ GK   F  +DHHW++  FAT    V +WDH+R++P   Y WGADS   V+FNPAE  LLASTGS R V LYDTR    MRK+V++MR+NA+AWNP EP +F  ANED NLYTFD+RNL++A+MIHKDHVSAVMDV++SPTG+EF SGSYDR++R+F  R+ +SREVYHTKRMQR                       +F V FSADA+FV++GSDDTN+RIWKA AS  LGK+ PRE +K EY D+LKKRY+H+ EV+RIAKHRHVP+ +KKAA A++  +++E +K+ N  KHSK G V  V  RKK +++++
Sbjct:    1 MKVKTISRVEQTFTQELATDRTKIHRNFDPKLHPFERPREYTRALNAVKLDKLFAKPFVGALDGHCDSVSCFATSNKSLVQFVSGACDGEIRLWDLPRRKCVWSVYGHGGFVRGLTVAPDGNTFFSCSEDKSIKQWRMAIANE-DDSPEPVQTFHGKES-FMGIDHHWSNTTFATCSSVVQVWDHNRSDPIHHYSWGADSITSVKFNPAEASLLASTGSDRAVSLYDTRLAQSMRKIVMEMRNNALAWNPMEPYHFTVANEDHNLYTFDMRNLDRAVMIHKDHVSAVMDVAYSPTGKEFVSGSYDRSIRIFNVRSAKSREVYHTKRMQRWVHKIAGWMHRGDLMGGLFLNCRIFAVKFSADAKFVLSGSDDTNIRIWKAQASRTLGKLNPRERKKLEYNDALKKRYQHLTEVKRIAKHRHVPKAIKKAAAAKQEGKERETKKLANVRKHSKPGKVPLVDIRKKSVIRQV 467

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BLAST of Ec-28_000340.1 vs. uniprot
Match: A0A418B2S4_9STRA (SAM domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B2S4_9STRA)

HSP 1 Score: 561 bits (1446), Expect = 1.280e-190
Identity = 274/469 (58.42%), Postives = 350/469 (74.63%), Query Frame = 1

Query:    1 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALQSVKLDKMFAKPLVGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLSVTPDGASFLSAGDDGMVKQWELGVASDLSETPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLLASTGSSREVCLYDTRATVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRAGRSREVYHTKRMQR-----------------------VFCVNFSADARFVMTGSDDTNLRIWKANASEKLGKVVPREARKQEYRDSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKERRKVDNRIKHSKAGTVETVPERKKKIVKEL 1338
            MKVKTISRVE+++T++   DR ++HRN DP LHPFE+ REYTRAL +VKLDK+FAKP VGALDGH D V C A+S ++LVQF+SGACDGEIRLWDL RR CVW   GH GFVRGL+V PDG +F S  +D  +KQW + +A++  ++PEP  T+ GK   F  +DHHW++  FAT    V +WDH+R++P   Y WGADS   V+FNPAE  LLASTGS R V LYDTR    MRK+V++MR+NA+AWNP EP +F  ANED NLYTFD+RNL++A+MIHKDHVSAVMDV++SPTG+EF SGSYDR++R+F  R+ +SREVYHTKRMQR                       +F V FSADA+FV++GSDDTN+RIWKA AS  LGK+ PRE +K EY D+LKKRY+H+ EV+RIAKHRHVP+ +KKAA A++  +++E +K+ N  KHSK G V  V  RKK +++++
Sbjct:  335 MKVKTISRVEQTFTQELATDRTKIHRNFDPKLHPFERPREYTRALNAVKLDKLFAKPFVGALDGHCDSVSCFATSNKSLVQFVSGACDGEIRLWDLPRRKCVWSVYGHGGFVRGLTVAPDGNTFFSCSEDKSIKQWRMAIANE-DDSPEPVQTFHGKES-FMGIDHHWSNTTFATCSSVVQVWDHNRSDPIHHYSWGADSITSVKFNPAEASLLASTGSDRAVSLYDTRLAQSMRKIVMEMRNNALAWNPMEPYHFTVANEDHNLYTFDMRNLDRAVMIHKDHVSAVMDVAYSPTGKEFVSGSYDRSIRIFNVRSAKSREVYHTKRMQRWVHKIAGWMHRGDLMGWLFLNCRIFAVKFSADAKFVLSGSDDTNIRIWKAQASRTLGKLNPRERKKLEYNDALKKRYQHLTEVKRIAKHRHVPKAIKKAAAAKQEGKERETKKLANVRKHSKPGKVPLVDIRKKSVIRQV 801

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BLAST of Ec-28_000340.1 vs. uniprot
Match: M4C0L6_HYAAE (DDB1- and CUL4-associated factor 13 n=18 Tax=Peronosporaceae TaxID=4777 RepID=M4C0L6_HYAAE)

HSP 1 Score: 533 bits (1374), Expect = 5.840e-185
Identity = 260/446 (58.30%), Postives = 335/446 (75.11%), Query Frame = 1

Query:    1 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALQSVKLDKMFAKPLVGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLSVTPDGASFLSAGDDGMVKQWELGVASDLSETPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLLASTGSSREVCLYDTRATVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRAGRSREVYHTKRMQRVFCVNFSADARFVMTGSDDTNLRIWKANASEKLGKVVPREARKQEYRDSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKERRKVDNRIKHSKAGTVETVPERKKKIVKEL 1338
            M+V+TISRVE+ +T++ + D+L+V RN DP+LHPFE+ REYTRAL +VKL++MFAKP +GALDGH DGV   A+S  +LV  +SGA DGE+R+WDL RR CVW   GH+GFVRGL+VTPDG++F S  +D  VKQW L V S+  + P   AT+  K   F  +DHHW+   FAT G  V +WD SR+ PT  + WGADS N V FNPAE  LLASTGS R + LYD R    MRK+V++MRSNA+AWNP EPMNF  ANE+ NLYTFD+R +N+A+M+HKDHVSAVMDV++SPTG+EF +GSYDRT+R+F  R+ +SREVYHT+RMQR       AD+ FV++GSDDTN+R+WKA AS+KL KV PRE RK EY +SLK RY+H+ E+ RIAKHRHVP+ +KKAA A+R    ++++K+ NR  H+K G V     R+K +VKE+
Sbjct:    1 MRVQTISRVEKDFTQEVQSDKLKVFRNYDPALHPFERPREYTRALNAVKLERMFAKPFIGALDGHCDGVTALATSPSSLVPLVSGAADGEVRVWDLPRRKCVWNVYGHRGFVRGLAVTPDGSTFYSCSEDKTVKQWALRVKSEDEDVPTALATFTSKEP-FLGIDHHWSQKMFATCGSKVQVWDPSRSTPTHEFAWGADSINSVHFNPAEASLLASTGSDRNITLYDIRVASSMRKIVMEMRSNALAWNPMEPMNFTVANENHNLYTFDMRKMNRAMMVHKDHVSAVMDVAYSPTGREFVAGSYDRTIRIFNVRSTKSREVYHTQRMQR-------ADSNFVLSGSDDTNIRVWKAEASKKLSKVGPRERRKIEYNESLKDRYQHLREISRIAKHRHVPKAIKKAAHAKREASSRDQKKMANRRAHAKEGAVPHTNIREKVVVKEM 438

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BLAST of Ec-28_000340.1 vs. uniprot
Match: A0A482SJF6_9ARCH (Sof1 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SJF6_9ARCH)

HSP 1 Score: 530 bits (1366), Expect = 1.220e-183
Identity = 259/447 (57.94%), Postives = 334/447 (74.72%), Query Frame = 1

Query:    1 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALQSVKLDKMFAKPLVGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLSVTPDGASFLSAGDDGMVKQWELGVASDLSETPEPTA-TWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLLASTGSSREVCLYDTRATVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRAGRSREVYHTKRMQRVFCVNFSADARFVMTGSDDTNLRIWKANASEKLGKVVPREARKQEYRDSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKERRKVDNRIKHSKAGTVETVPERKKKIVKEL 1338
            MK+KTISR EE Y R  K D ++VHRNRDP +HPFE+AREY RA+ + KLDK+FAKP VGALDGH DGV+C +S R +LV F+SG+CDGE+R+WDLS + CVW A+ H+GFVRG++    G +F S GDD ++K W L     L E  E +    +  S    S+DHHW D++FAT+GD V +WD +RA+P  +Y+WGADS  CVR+NPAE CLLASTG+ R VCLYD R+++PMRK+V+ M +N VAWNP+EPMNF  A+ED NLYTFD+R L+ ALMIHKDHV AVMDV++SPTG+EF S SYDRTVR+F   +G+SRE YHTKRMQRVFC  FSADA +V++GSDDTN+RIW++ AS+       R  RK++Y  SLKKR+ HMPE++R+   + +P+ ++KA     VQR  + RK +NRIKHSK G+V    ERKK ++KEL
Sbjct:    1 MKIKTISRTEEDYVRKSKLDIVKVHRNRDPVVHPFERAREYARAVVATKLDKIFAKPFVGALDGHKDGVYCMSSVRSHLVPFISGSCDGELRVWDLSTKHCVWHAIAHEGFVRGVAPDVAGNAFYSCGDDKVIKLWAL--QHQLEEEGEVSPLNVIHSSHSMTSIDHHWVDSQFATSGDVVSIWDGTRAQPINTYKWGADSVLCVRYNPAEACLLASTGNDRSVCLYDLRSSLPMRKMVMAMNANKVAWNPREPMNFTLASEDYNLYTFDMRKLDHALMIHKDHVGAVMDVAYSPTGREFVSASYDRTVRIFNVTSGKSREAYHTKRMQRVFCSAFSADAEYVLSGSDDTNVRIWRSVASKSGAVDSGRAERKKQYMQSLKKRFAHMPEIKRMNSDKKLPKAIRKAKGIMHVQRLSQHRKTENRIKHSKEGSVILPTERKKAVIKEL 445

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BLAST of Ec-28_000340.1 vs. uniprot
Match: A0A6P4ZG13_BRABE (DDB1- and CUL4-associated factor 13 n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4ZG13_BRABE)

HSP 1 Score: 505 bits (1301), Expect = 8.790e-174
Identity = 243/445 (54.61%), Postives = 314/445 (70.56%), Query Frame = 1

Query:    1 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALQSVKLDKMFAKPLVGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLSVTPDGASFLSAGDDGMVKQWELGVASDLSETPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLLASTGSSREVCLYDTRATVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRAGRSREVYHTKRMQRVFCVNFSADARFVMTGSDDTNLRIWKANASEKLGKVVPREARKQEYRDSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKERRKVDNRIKHSKAGTVETVPERKKKIVKE 1335
            MK+K +SR  + Y R+ K D  ++ RN DP+LHPFE AREYTRAL + KL+++FAKP VGALDGH DGV C A    +L   L+GACDGEI++W+L  R C      H GFVRG+ VTPD  + LS GDD  +K W L       E  EP  T +GKS  F  +DHHW DA FAT G +VD+WDH+RAEP  S+ WG DS NCVRFNP E+  LAS  + R + LYDTR + P+RKV+L MRSN +AWNP E   F  ANED NLY+FD+R L     IH DHV+AV+D+ +SPTG+EF SGS+D+T+R+FP   GRSREVYHTKRMQRVFC+ +S D +++++GSD+TN+RIWKA A+EK+GK+ PRE     Y D LK++++H P+VRRIA+HRHVP+ V       R+ +D  RRK +NRI+HSK G+++   ER+K +V E
Sbjct:    1 MKIKVLSRNPDDYGRETKRDIQRLPRNYDPALHPFEAAREYTRALNATKLERVFAKPFVGALDGHRDGVNCMAKHPGSLSTLLTGACDGEIKIWNLGSRDCRRTIQAHTGFVRGMCVTPDHGNVLSIGDDKTIKMWSLTSPEAGEEEEEPVQTILGKSI-FTGIDHHWKDATFATCGQTVDIWDHARAEPLRSFSWGVDSLNCVRFNPIEKHYLASCAADRSIILYDTRGSSPLRKVILNMRSNVLAWNPMEAFVFTVANEDHNLYSFDIRRLTSPFNIHMDHVNAVLDLDYSPTGREFVSGSFDKTIRIFPLEKGRSREVYHTKRMQRVFCIKWSLDNKYILSGSDETNVRIWKAKAAEKIGKLTPREESALTYSDKLKEKFQHHPQVRRIARHRHVPKEVYHLTRQTRIMKDSRRRKEENRIRHSKPGSIKKKREREKVVVAE 444

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BLAST of Ec-28_000340.1 vs. uniprot
Match: W1P0N3_AMBTC (DDB1- and CUL4-associated factor 13 n=3 Tax=Magnoliopsida TaxID=3398 RepID=W1P0N3_AMBTC)

HSP 1 Score: 493 bits (1269), Expect = 7.660e-169
Identity = 240/452 (53.10%), Postives = 326/452 (72.12%), Query Frame = 1

Query:    1 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALQSVKLDKMFAKPLVGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLSVTPDGASFLSAGDDGMVKQWELG--VASDLSETPE----PTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLLASTGSSREVCLYDTRATVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRAGRSREVYHTKRMQRVFCVNFSADARFVMTGSDDTNLRIWKANASEKLGKVVPREARKQEYRDSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKERRKVDNRIKHSKAGTVETVPERKKKIVKEL 1338
            MKVK ISR  E +TR+   D  +V RN DP LH  EKA EY RAL + KL+K+FAKP +GA+DGH D + C A +   L    SG+ DG+IRLWD+S RS V + VGH+G VRGL+ + DG+  +S G+D  V+ W +     +DL +  E    P A ++ K+  F+++DH W    FAT G  VD+WDHSR+EP  S+ WG+D+   VRFNPA + +LA++ S R + LYD R  +P +K+V+Q R+NA+AWNP+EPMNF  ANED N Y++D+RN+ QA  +H+DHVSAVMD+ +SPTG+EF +GSYDRTVR+F + AG SRE+YHTKRMQRVFCV FS DA +V++GSDDTNLR+WKA ASE+LG ++PRE +KQEY D++K+R++H+PEV+RI +HRH+P+ + KAA   R   D E++K + +  HS  GTV TVP RK++IV E+
Sbjct:    1 MKVKVISRSAEEFTRERSQDLQRVFRNFDPKLHAQEKAVEYARALNAAKLEKIFAKPFLGAMDGHVDAISCMAKNPNYLKGIFSGSMDGDIRLWDISSRSTVQQFVGHKGAVRGLAASTDGSILVSCGNDCTVRLWSIPGPKIADLDDASENASNPLAVYVSKNA-FRAVDHQWDGNLFATVGAQVDIWDHSRSEPVTSFAWGSDTVVSVRFNPAHKDILATSASDRSITLYDLRMALPSKKIVMQTRTNAIAWNPREPMNFSLANEDCNCYSYDMRNMEQAKCVHRDHVSAVMDIDYSPTGREFVTGSYDRTVRIFQYNAGHSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLLPRERKKQEYLDAVKERFKHLPEVKRIVRHRHLPKPIYKAASLRRTMADAEKKKEERKRAHSAPGTVVTVPLRKRRIVSEI 451

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BLAST of Ec-28_000340.1 vs. uniprot
Match: A0A7S0MFA3_9CRYP (DDB1- and CUL4-associated factor 13 (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MFA3_9CRYP)

HSP 1 Score: 490 bits (1261), Expect = 1.210e-167
Identity = 245/444 (55.18%), Postives = 311/444 (70.05%), Query Frame = 1

Query:    1 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALQSVKLDKMFAKPLVGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLSVTPDGASFLSAGDDGMVKQWELGVASDLSETPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLLASTGSSREVCLYDTRATVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRAGRSREVYHTKRMQRVFCVNFSADARFVMTGSDDTNLRIWKANASEKLGKVVPREARKQEYRDSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKERRKVDNRIKHSKAGTVETVPERKKKIVK 1332
            MKVK ++RVEE +TR+ KGD ++  RN DP LHPFE+AREYTRAL +VKLDK+FAKP V AL GH D V C A SR  L   +SG+CDGE+RLWDL   +  W    H GFVRG++ +P+G +  S GDD  VK W+     D S    P  T +G+   F  LDHHWT+   AT G  V +WDH R+EP  +  WG++S   VRFNPAER +LASTGS R   L+D R+   +RK+V   RSN + WNP E  NFV ANED NLYTFD+R ++ AL +H DHVSAV+DV FSPTGQEF +GSYDRTVR+F H  G SRE+YH KRMQRV+ V F+ DAR+V++ SDD N+R+W+A ASE +  ++PRE R  EYR+ LK+R++  PEVRRIA+HRH+PR V KA + + V +  ++RK DN  +HS+ G+V  VPERKK IVK
Sbjct:    9 MKVKVLNRVEEDFTRERKGDVVKTFRNPDPVLHPFERAREYTRALNAVKLDKVFAKPFVRALSGHRDAVTCMARSRVKLTDIISGSCDGELRLWDLCTGNSRWTTTAHSGFVRGIAFSPEGDTIWSCGDDKTVKMWQRDPDEDESAIVSPIHTILGQHA-FLGLDHHWTEPIVATCGVDVQIWDHQRSEPIHTLTWGSESVLSVRFNPAERQVLASTGSDRSTVLHDLRSATAIRKLVTAKRSNKMCWNPMEAFNFVLANEDNNLYTFDMRKMDCALCVHMDHVSAVLDVDFSPTGQEFVTGSYDRTVRIFRHNEGHSREIYHGKRMQRVWSVLFTGDARWVLSASDDFNVRLWRAKASEGVKPLLPREQRGHEYRERLKERFKEAPEVRRIARHRHLPRAVLKAGKLKGVIKQSKKRKEDNARRHSRPGSVPHVPERKKHIVK 451

[Close]

BLAST of Ec-28_000340.1 vs. uniprot
Match: A0A2D4BDS0_PYTIN (Glycoside hydrolase, putative (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BDS0_PYTIN)

HSP 1 Score: 501 bits (1289), Expect = 1.010e-165
Identity = 246/446 (55.16%), Postives = 309/446 (69.28%), Query Frame = 1

Query:    1 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALQSVKLDKMFAKPLVGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLSVTPDGASFLSAGDDGMVKQWELGVASDLSETPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLLASTGSSREVCLYDTRATVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRAGRSREVYHTKRMQRVFCVNFSADARFVMTGSDDTNLRIWKANASEKLGKVVPREARKQEYRDSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKERRKVDNRIKHSKAGTVETVPERKKKIVKEL 1338
            MKVKTISRVE+ +T + + D+L+V RN DP+LHPFE+ REYTRAL +VKLD++FAKP VGALDGH DGV    +S ++LV F+SGACDGEIR+WDL R+ CVW A GH+GFVRGL+V P G  F S  +D  VKQW L V  D  E P+  +T+  K   F  +DHHW+   F T    V +WD  R+EPT  + WGADS   V+FNPAE  LLAS GS R + LYD R    MRKVVL MRSNA+AWNP EP NF  ANED NLYTFD+R LN+ALM+HKDHVSAVMDV++SPTG+EF SGSYDRT+R+F   + +SREVYH K                           IWK+ A++KLGK+ PRE RK EY +SLK+RY+H+ E+ RI+KHRHVP+ +KKA EA+R   ++E++K  NR  H++ G V     R++ I+KEL
Sbjct:  459 MKVKTISRVEKDFTAEVESDKLKVFRNYDPALHPFERPREYTRALNAVKLDRLFAKPFVGALDGHSDGVSAITTSPKSLVAFISGACDGEIRIWDLPRKKCVWNAYGHKGFVRGLTVAPSGGIFYSCSEDKTVKQWSLQVNDDEEEMPQALSTFTSKEP-FLGIDHHWSKDLFVTCSSKVQVWDPHRSEPTHEFSWGADSITSVKFNPAEESLLASCGSDRNITLYDVRMASSMRKVVLDMRSNALAWNPMEPFNFTVANEDHNLYTFDMRKLNRALMVHKDHVSAVMDVAYSPTGREFVSGSYDRTIRIFGVNSAKSREVYHAKXXXXXXXXXXXXXXXXXXXXXXXXXXXIWKSEANKKLGKIAPRERRKLEYNESLKERYQHLREISRISKHRHVPKAIKKATEAKREANEREKKKTANRRAHARPGAVPFTNTREQAIIKEL 903

The following BLAST results are available for this feature:

BLAST of Ec-28_000340.1 vs. uniprot

BLAST of Ec-28_000340.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FIH9_ECTSI	0.000e+0	100.00	Sof1 domain-containing protein n=2 Tax=Ectocarpus ...	[more]
A0A836C9W7_9STRA	1.140e-222	67.79	WD40-repeat-containing domain protein n=1 Tax=Trib...	[more]
A0A024UAB8_9STRA	1.940e-195	58.42	Sof1 domain-containing protein n=11 Tax=Aphanomyce...	[more]
A0A418B2S4_9STRA	1.280e-190	58.42	SAM domain-containing protein n=1 Tax=Aphanomyces ...	[more]
M4C0L6_HYAAE	5.840e-185	58.30	DDB1- and CUL4-associated factor 13 n=18 Tax=Peron...	[more]
A0A482SJF6_9ARCH	1.220e-183	57.94	Sof1 domain-containing protein n=1 Tax=archaeon Ta...	[more]
A0A6P4ZG13_BRABE	8.790e-174	54.61	DDB1- and CUL4-associated factor 13 n=3 Tax=Branch...	[more]
W1P0N3_AMBTC	7.660e-169	53.10	DDB1- and CUL4-associated factor 13 n=3 Tax=Magnol...	[more]
A0A7S0MFA3_9CRYP	1.210e-167	55.18	DDB1- and CUL4-associated factor 13 (Fragment) n=1...	[more]
A0A2D4BDS0_PYTIN	1.010e-165	55.16	Glycoside hydrolase, putative (Fragment) n=1 Tax=P...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_28	contig	chr_28:384212..389892 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	901.0
Seed ortholog evalue	2.3e-259
Seed eggNOG ortholog	2880.D7FIH9
Preferred name	DCAF13
Length	1508
KEGG ko	ko:K11806
Hectar predicted targeting category	other localisation
Gene id	Ec-28_000340.1
GOs	GO:0000151,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0006139,GO:0006364,GO:0006396,GO:0006464,GO:0006725,GO:0006807,GO:0008134,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0015630,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0030054,GO:0030331,GO:0030490,GO:0030515,GO:0030684,GO:0030686,GO:0031461,GO:0031974,GO:0031981,GO:0032040,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0035257,GO:0035258,GO:0036211,GO:0042254,GO:0042274,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043687,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0051427,GO:0070013,GO:0071704,GO:0071840,GO:0080008,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1902494,GO:1990234,GO:1990904
EggNOG free text desc.	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
EggNOG OGs	KOG0268@1,KOG0268@2759
COG Functional cat.	S
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko03009,ko04121

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-28_000340	Ec-28_000340	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_28 384187..389892 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-28_000340.1	Ec-28_000340.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_28 384212..389728 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-28_000340.1.1	Ec-28_000340.1.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 384212..384322 +
Ec-28_000340.1.2	Ec-28_000340.1.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 384997..385138 +
Ec-28_000340.1.3	Ec-28_000340.1.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 385683..385867 +
Ec-28_000340.1.4	Ec-28_000340.1.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 386230..386405 +
Ec-28_000340.1.5	Ec-28_000340.1.5	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 386616..386709 +
Ec-28_000340.1.6	Ec-28_000340.1.6	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 387202..387318 +
Ec-28_000340.1.7	Ec-28_000340.1.7	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 387732..387925 +
Ec-28_000340.1.8	Ec-28_000340.1.8	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 388600..388725 +
Ec-28_000340.1.9	Ec-28_000340.1.9	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 389080..389191 +
Ec-28_000340.1.10	Ec-28_000340.1.10	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 389642..389892 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-28_000340.1	CDS:Ec-28_000340.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_28 384212..384322 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-28_000340	3UTR:Ec-28_000340.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	three_prime_UTR	chr_28 389729..389892 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_28:384212..389892+
coding sequence from alignment at chr_28:384212..389892+

mRNA sequence

>Ec-28_000340.1 ID=Ec-28_000340.1|Name=Ec-28_000340.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=448bp
MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALQSVKL
DKMFAKPLVGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRS
CVWRAVGHQGFVRGLSVTPDGASFLSAGDDGMVKQWELGVASDLSETPEP
TATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADS
NNCVRFNPAERCLLASTGSSREVCLYDTRATVPMRKVVLQMRSNAVAWNP
QEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFA
SGSYDRTVRVFPHRAGRSREVYHTKRMQRVFCVNFSADARFVMTGSDDTN
LRIWKANASEKLGKVVPREARKQEYRDSLKKRYEHMPEVRRIAKHRHVPR
IVKKAAEAERVQRDKERRKVDNRIKHSKAGTVETVPERKKKIVKELT*

spliced messenger RNA

>Ec-28_000340.1 ID=Ec-28_000340.1|Name=Ec-28_000340.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1508bp|location=Sequence derived from alignment at chr_28:384212..389892+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAGGTTAAAACTATTAGCCGCGTGGAGGAGTCCTACACTCGTGACTG
CAAGGGTGACCGGCTTCAAGTGCACCGAAACCGCGACCCCTCCCTGCATC
CTTTTGAAAAGGCAAGAGAGTACACCCGAGCATTACAGTCAGTAAAGCTT
GACAAGATGTTTGCGAAGCCTCTGGTTGGGGCGTTGGATGGGCATGGAGA
CGGCGTGTTCTGCTCCGCCTCAAGCAGGAGAAATCTTGTGCAGTTCTTGT
CAGGCGCCTGTGACGGGGAGATCCGACTGTGGGACCTGTCGCGGCGCAGC
TGCGTGTGGCGGGCGGTTGGACACCAGGGTTTCGTTCGAGGTCTGTCGGT
CACCCCGGACGGAGCCAGCTTCCTGTCCGCGGGGGACGACGGGATGGTCA
AGCAGTGGGAGCTCGGCGTGGCATCTGATCTCTCGGAGACGCCGGAACCC
ACGGCGACTTGGATGGGCAAGTCGGGCGGCTTTAAGTCCCTCGACCACCA
CTGGACGGACGCGAAGTTCGCCACGGCTGGAGACTCGGTAGACCTTTGGG
ACCACAGCAGAGCCGAACCAACGCTCTCGTACCAGTGGGGTGCGGACAGC
AACAACTGCGTGAGGTTTAACCCCGCTGAGAGATGTTTGCTTGCGAGCAC
TGGCTCCAGCCGAGAAGTGTGCCTCTACGATACGAGAGCGACGGTGCCTA
TGCGCAAGGTTGTCTTGCAAATGCGATCAAACGCCGTGGCGTGGAACCCT
CAGGAGCCAATGAATTTCGTTTGCGCCAACGAGGACACCAATCTCTACAC
GTTCGACCTGCGGAACCTCAACCAGGCCTTGATGATCCACAAGGACCACG
TGTCTGCGGTGATGGACGTGTCCTTCTCGCCCACGGGGCAGGAGTTCGCG
AGCGGGTCGTACGACCGCACGGTTAGGGTCTTCCCGCACCGCGCGGGTCG
ATCGCGGGAGGTGTACCACACCAAGCGCATGCAGCGCGTGTTCTGCGTCA
ACTTCAGCGCGGATGCGAGGTTTGTGATGACGGGCAGCGACGACACGAAC
CTTCGGATCTGGAAGGCCAATGCGTCGGAGAAGCTGGGGAAGGTGGTGCC
GAGGGAGGCTAGGAAGCAGGAGTACAGGGACAGCCTCAAGAAGAGGTACG
AACACATGCCCGAAGTGCGGCGAATTGCGAAGCACCGACACGTGCCGAGA
ATCGTCAAGAAGGCGGCGGAGGCGGAGCGCGTGCAGAGGGACAAGGAGCG
CCGGAAGGTGGACAACCGCATCAAGCACAGCAAGGCCGGGACGGTGGAGA
CGGTGCCAGAGAGAAAGAAGAAGATCGTCAAGGAGCTCACGTAAAGGCAC
GCTTTTCTAGTCTTGCGCCCGGTCGTGCTCTTCTGAGGACGGGCGTTTCA
CGTGTGGCAATTACTGTTGCTGTGTTGGTATTTGTTTTTGGCCGGTGGCC
CCGAGAGCGCCTTTTGTGTCTCTGTCGTCTGTTGTTAGGAGCTACCAGAC
ATCTCTCT

protein sequence of Ec-28_000340.1

>Ec-28_000340.1 ID=Ec-28_000340.1|Name=Ec-28_000340.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=448bp
MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALQSVKL
DKMFAKPLVGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRS
CVWRAVGHQGFVRGLSVTPDGASFLSAGDDGMVKQWELGVASDLSETPEP
TATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADS
NNCVRFNPAERCLLASTGSSREVCLYDTRATVPMRKVVLQMRSNAVAWNP
QEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFA
SGSYDRTVRVFPHRAGRSREVYHTKRMQRVFCVNFSADARFVMTGSDDTN
LRIWKANASEKLGKVVPREARKQEYRDSLKKRYEHMPEVRRIAKHRHVPR
IVKKAAEAERVQRDKERRKVDNRIKHSKAGTVETVPERKKKIVKELT*

mRNA from alignment at chr_28:384212..389892+

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-28_000340.1 ID=Ec-28_000340.1|Name=Ec-28_000340.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=5681bp|location=Sequence derived from alignment at chr_28:384212..389892+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGAAGGTTAAAACTATTAGCCGCGTGGAGGAGTCCTACACTCGTGACTG
CAAGGGTGACCGGCTTCAAGTGCACCGAAACCGCGACCCCTCCCTGCATC
CTTTTGAAAAGGTATGGTTACCCCGCAACTTTGGTAGACCGGGTGGGGGT
GCGTTGTGCGTTGGCTGTTGGCTGATCAAGTCGGGACTAGCAAGTTCTTG
CGTACAAGTATCATGTTTCCCGTTTGTGGCGGTTCCGTGGACCGATCTCT
ACGTTGATCGTACAGACTGCAAGGGCCGAGAGAGTTGTAAATCTTGTCAG
CACGTCAGCACCACATGATTGCGCGAAAATTAGAGTGAAACGCGTTGACA
GTCTCGCCTGTTTGGAGTCCTTTCCCCCATACCCGCCCAATCACAACCTA
GACCTGTCCGCGCATCACAATTCTACCCTATCCAACGCGACTCCAACCTA
TTTCCTTTGAAGTGAATCAAACACTCCCCAACAACGCCTTGCACCTTGGC
ACATGTTTCTGCCTACTACGCGAACCCACGTAGAAGCAGCACCTAACCAA
GGGTACACCTTACTGGCACGCGTGTAGGTTTGCAGGTTCAGGTTTTAGGT
TAGATTCGAGGGGGTTATGGCCGATTCACCTTGTGAGTATACGTGCTTTA
GAAACACTGCTGTAATCCTGTGACGAGGACAATCGCGACGAGCAATAAAC
TTCCCATTCTGCTCATCCATCCGATCTATGCCGTTGACTATTTCGCTGTT
TCTCTTTCGCATCGTCAACGCCCTCTTTCTTCAAGGCAAGAGAGTACACC
CGAGCATTACAGTCAGTAAAGCTTGACAAGATGTTTGCGAAGCCTCTGGT
TGGGGCGTTGGATGGGCATGGAGACGGCGTGTTCTGCTCCGCCTCAAGCA
GGAGAAATCTTGTGCAGTTCTTGTCAGGTGTGGTTGTGTGTGTGTGCCCC
TGCAATCGCGCTTGGTGCATGCACACGGCGAGACGTGTAGGTGTGAAGAC
GATTCTTGGACGGCATGCCGAAAGTCTAAATACGCTTTGTCTGAGCTGTG
CTCCGGAGTCAGCCTACGACAACGGTTTCGATGGGCTTGGTGGGTGACAA
GAGAGGCAAACCGCTACTCCAACCCGGCGCGGTAGATGTGGGCCCACAGC
ACCGTGGCCGTTTTATCCTTGATCGATGTTTCCTGTGATGCGGGTTATAC
GAAATTGGAGACATCTGAAACGAGGGGCGTGCCGGTTTGGTGTTTGCCGG
ATGGCTTGGCATGCCCCCGCCCCGCCATTTGAATACAAAACGTCAATAAC
AGAACAGTTTGCTAGGACATATGCCACGAGCCGCTGAGCTAGATATACAC
AGCACGAACGGCTGATGCTATCTTCGTGTTTCTGCTGCCGTGTGGGCAAT
GTGTCGGTGCCTCGCTCTGCGGTTTCATTTGTACGGCATCCAACACGATT
GTCAATGTGTTGGTGGAGCAGGCGCCTGTGACGGGGAGATCCGACTGTGG
GACCTGTCGCGGCGCAGCTGCGTGTGGCGGGCGGTTGGACACCAGGGTTT
CGTTCGAGGTCTGTCGGTCACCCCGGACGGAGCCAGCTTCCTGTCCGCGG
GGGACGACGGGATGGTCAAGCAGTGGGAGCTCGGCGTGGCATCTGATCTC
TCGGAGGTCAGGAGGAAAATCAGTTTTGTTGACGCAGAAGTTGCTGCCTA
TGCTGTTGTTGTCATACAAGCGGTCGTATCGAAAAGAACCTGCGAGTGTT
GCGTTTAAGGGAGGCCATCGTATGGCGGAGGTCTCCGTTTCTGTCGAGAG
CAAGATGGCATATGTTCGTTGCTACACTGCTGCTGCGCGGTCGTTGCCTG
AAGACGTGGCGAGGGAGAAAGGCGTGGTGATTCGTGGTGGTAGCGACAGC
AAGTGTTCGCTGGTACAATATTACTGTACCTGTTTTTGTCCTTGTGTCAA
CAACGATGCGATGTTCACAATCGTAATGCTTGTCAAACCATGCTGCAATG
CCGCCCCTTGGCGTGCAGACGCCGGAACCCACGGCGACTTGGATGGGCAA
GTCGGGCGGCTTTAAGTCCCTCGACCACCACTGGACGGACGCGAAGTTCG
CCACGGCTGGAGACTCGGTAGACCTTTGGGACCACAGCAGAGCCGAACCA
ACGCTCTCGTACCAGTGGGGTGCGGACAGCAACAACTGCGTGAGGTGCGT
CATCATTGGGACAAGCCCGTCTGTGCCCTCCTCCTATAGTGTCACGGCAC
CGCACAAGAGACGCAGGAGTGTGTACTGTAGGCTACATCGTGCACGACTT
GCCGCAGCAACCAGCATTTGACCGCGCTGTCGTCGACGTCGACCGTACGC
TCGCCACGCGCCGTCCTCCGTCCGTCGCTGCCTTGTCGCCCTGGCCTGTC
CCAGGTTTAACCCCGCTGAGAGATGTTTGCTTGCGAGCACTGGCTCCAGC
CGAGAAGTGTGCCTCTACGATACGAGAGCGACGGTGCCTATGCGCAAGGT
AATTGTCAGTGCGGGGCAAACACGCCGTCAGCAATATCTGTCGGTTGAAT
CCCACTCCCCCCCGCCGAGATTCCCAAAATAGCGGTACCGAGGTAAAAAG
CGCTGCCCAGCTGTTACCTGACCACGCGCTGGACGCTATTTTGCATGTCC
AGCGAAATAACTCCTACCTGGTTCACGTCTGCACTCATGTAGACGTCGAT
CACCCGCACTTGCACCCTTTTAAAGGTGTGTTATATATGTGCAGGTCTGT
TTCATCTGACTGCTGTGTGCTGTGTATTTGATTGTGCTTGAATTGTTCGG
CAATGCTGTGTAGAGGGCGCGATACCACCACCAGAGAGGATCTGACCCTG
GTACTCTCGCGTATTTGTTTCAAATCTGTCCTATACCTTGGCCTAACGCT
TTGTTTCTCTCTTCTCTCTCTCTTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTTGGCCCTCGCGGACACTTTGCTTCTTTGTGTGGAAGGTTGTCTTGC
AAATGCGATCAAACGCCGTGGCGTGGAACCCTCAGGAGCCAATGAATTTC
GTTTGCGCCAACGAGGACACCAATCTCTACACGTTCGACCTGCGGAACCT
CAACCAGGTGAGTCACTACGGCTGCGCACCCTTCCCTGTGCAAGCAAGGG
CATTCTGCATGTATGACTGACTAGTTGCTGTCAATGAGATAGCTACGAGA
CAAGGCGCGCAGGTTCATCCCCCTGGTGGTGGCCGCGAAGCTCTGTATGA
AACACGCAGGTGTTCCTCACGTTGCTGTCAGCCTCTCCTTGAACCTCCAT
TGGCATTGCGCGTTCTCACGACCGAACGAGCAGCATTGATACTCTCCAGA
CTGGCTCACTCGCACTCGAATCTATTCTAAATGACAAATCTAAATGACAA
CCAACGGAATAGCTTTTCTTCGAAGCTCACGCGTCTGGCTCCACGCACAG
ATCCATAAGCAGGTTTGCACTGCCGCGCGTGGCCCCTTTACATCTCGCCC
TCTCTGCCTCTCAACGCCAGGCCTTGATGATCCACAAGGACCACGTGTCT
GCGGTGATGGACGTGTCCTTCTCGCCCACGGGGCAGGAGTTCGCGAGCGG
GTCGTACGACCGCACGGTTAGGGTCTTCCCGCACCGCGCGGGTCGATCGC
GGGAGGTGTACCACACCAAGCGCATGCAGCGCGTGTTCTGCGTCAACTTC
AGCGCGGATGCGAGGTATCTGCGTCAGCAGGGACTACTGCTGTGTTGTTG
TGGAATCCGTTTCTTATGCAGCCCGTGGAAACCCCGGTTGATCCGGAGAA
AGCTATTGAATGATGAGAGGGAGAAGGAGAGGGGTGATGCGCCCGTGAGG
CGGCGGCACGCCGCAGAGATCCCGTAGATTACCTCCAGGAAATTGGTATT
GTGCCGTCGAACACCCGCCACTGCAGAGCAGGGGGTGATGAGAGCGAGAA
CGAGCAGTTGACGGGTACCGTGGTACTCTTTGCGGAGCCCCTCCTCCAAA
TTCAACAAGCCCCCGGCACGGTACACTACAACGATGTTTATTTATTTGCC
GAAAATGTTGATATCTTCCGAGGTTGAACCTGCCCTGCCACCGTTTAGGC
GGGAGTTTCGTGGTACGTTCACGCCAAGGTTCTAGTATACCACGCAGGCG
TGCTTGTTGTTTTGCCCCGCTCGCTTCTCGGATCGCCTCGTCGCCGCCGA
CTGTCGAGGCTTGCTTTGAGCGCGCATTTTGGTTTGCCGGGTGTTGCGCC
GCAAAGGCTCTCTCGGCTCGATTTTTTGCTGCTCCCCCCATCTTGGTGCT
CGATGCTCCCATTGCTTGGTCGCGTACCTTTTGTATAACACCGCACCTGC
TACCGCTGCTGCTAAAACCCTTGCGGTGGATACGACAGGTTTGTGATGAC
GGGCAGCGACGACACGAACCTTCGGATCTGGAAGGCCAATGCGTCGGAGA
AGCTGGGGAAGGTGGTGCCGAGGGAGGCTAGGAAGCAGGAGTACAGGGAC
AGCCTCAAGAAGAGGTGAGCTCCGTCCTTGCTTGTCGTCCTTGCACGCGG
CAGGGTTGGCCGTGCTCGTCTATACTGGTGTCTCGTCTTTCGTACCGGTA
GGAGGTTGCCGTTAACGGGTATTGTGAACACATTCCGTGCCCAGTCCGAG
GACATGGCCGTGTGTATGGGTGGGGGGGAGCAGCTACCCAAGGCCCACCT
CGTTTCCAGCGCACGGCACACTGTTTTTTGTGTGGCCTCCGCACATCTTG
AAACCTATTCGTACCGTAGTGGCGCCGCCTGCGTCTTCGCAGCCATGATC
CCATGGCCTAATTCTTGCCGCGCGCACGGGCACGTATACAATTTCCCCCC
CGCCACGATCGAGAGCAGGTACGAACACATGCCCGAAGTGCGGCGAATTG
CGAAGCACCGACACGTGCCGAGAATCGTCAAGAAGGCGGCGGAGGCGGAG
CGCGTGCAGAGGGACAAGGAGCGCCGGAAGGTGAGCGGCGGGTTCCGAAC
CTCATGAGACGTGACACTCGCGTGCACAATTACATAGTAGTAGGCATACG
CTTATGCACACCTCGTGGATCTTGCTCTTGAATAGGTTACTACTGTGGGC
TGTTGGAAGCCATACATGGGGATTTTTTTAACGTCTGTTTTGCCGGTGTC
CCTGCCTGGCCCTGTCGTGAAACGAGGGGGAGGGTAGGAGTCGGGCACTT
CCGTTCTTAAAGACCTTTGCATCTTTCGCGAAGAGGAAGCTCGCCATTTG
CCTTATCGGCCTCGGGAAAACAGGCACAGAGGGGCGGAACGGCGGCTTTT
AGTGTCAAGAAATCAATCCTGCCCGGTTTGTGCAATGCGTGCCTACTTTT
CATGGACCAAGCTTCTTCAAAATAGCCGCCACATGGATTCGACTGAGTGG
CGTCCCGGTTTTGCCTACTACTCCCGACAGGTGGACAACCGCATCAAGCA
CAGCAAGGCCGGGACGGTGGAGACGGTGCCAGAGAGAAAGAAGAAGATCG
TCAAGGAGCTCACGTAAAGGCACGCTTTTCTAGTCTTGCGCCCGGTCGTG
CTCTTCTGAGGACGGGCGTTTCACGTGTGGCAATTACTGTTGCTGTGTTG
GTATTTGTTTTTGGCCGGTGGCCCCGAGAGCGCCTTTTGTGTCTCTGTCG
TCTGTTGTTAGGAGCTACCAGACATCTCTCT

Coding sequence (CDS) from alignment at chr_28:384212..389892+

>Ec-28_000340.1 ID=Ec-28_000340.1|Name=Ec-28_000340.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1344bp|location=Sequence derived from alignment at chr_28:384212..389892+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGAAGGTTAAAACTATTAGCCGCGTGGAGGAGTCCTACACTCGTGACTG
CAAGGGTGACCGGCTTCAAGTGCACCGAAACCGCGACCCCTCCCTGCATC
CTTTTGAAAAGGCAAGAGAGTACACCCGAGCATTACAGTCAGTAAAGCTT
GACAAGATGTTTGCGAAGCCTCTGGTTGGGGCGTTGGATGGGCATGGAGA
CGGCGTGTTCTGCTCCGCCTCAAGCAGGAGAAATCTTGTGCAGTTCTTGT
CAGGCGCCTGTGACGGGGAGATCCGACTGTGGGACCTGTCGCGGCGCAGC
TGCGTGTGGCGGGCGGTTGGACACCAGGGTTTCGTTCGAGGTCTGTCGGT
CACCCCGGACGGAGCCAGCTTCCTGTCCGCGGGGGACGACGGGATGGTCA
AGCAGTGGGAGCTCGGCGTGGCATCTGATCTCTCGGAGACGCCGGAACCC
ACGGCGACTTGGATGGGCAAGTCGGGCGGCTTTAAGTCCCTCGACCACCA
CTGGACGGACGCGAAGTTCGCCACGGCTGGAGACTCGGTAGACCTTTGGG
ACCACAGCAGAGCCGAACCAACGCTCTCGTACCAGTGGGGTGCGGACAGC
AACAACTGCGTGAGGTTTAACCCCGCTGAGAGATGTTTGCTTGCGAGCAC
TGGCTCCAGCCGAGAAGTGTGCCTCTACGATACGAGAGCGACGGTGCCTA
TGCGCAAGGTTGTCTTGCAAATGCGATCAAACGCCGTGGCGTGGAACCCT
CAGGAGCCAATGAATTTCGTTTGCGCCAACGAGGACACCAATCTCTACAC
GTTCGACCTGCGGAACCTCAACCAGGCCTTGATGATCCACAAGGACCACG
TGTCTGCGGTGATGGACGTGTCCTTCTCGCCCACGGGGCAGGAGTTCGCG
AGCGGGTCGTACGACCGCACGGTTAGGGTCTTCCCGCACCGCGCGGGTCG
ATCGCGGGAGGTGTACCACACCAAGCGCATGCAGCGCGTGTTCTGCGTCA
ACTTCAGCGCGGATGCGAGGTTTGTGATGACGGGCAGCGACGACACGAAC
CTTCGGATCTGGAAGGCCAATGCGTCGGAGAAGCTGGGGAAGGTGGTGCC
GAGGGAGGCTAGGAAGCAGGAGTACAGGGACAGCCTCAAGAAGAGGTACG
AACACATGCCCGAAGTGCGGCGAATTGCGAAGCACCGACACGTGCCGAGA
ATCGTCAAGAAGGCGGCGGAGGCGGAGCGCGTGCAGAGGGACAAGGAGCG
CCGGAAGGTGGACAACCGCATCAAGCACAGCAAGGCCGGGACGGTGGAGA
CGGTGCCAGAGAGAAAGAAGAAGATCGTCAAGGAGCTCACGTAA

Synonyms

The feature 'Ec-28_000340.1' has the following synonyms


Synonym
Esi0120_0062
Esi_0120_0062