Ec-28_000320.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-28_000320.1
Unique NameEc-28_000320.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length194
Homology
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BLAST of Ec-28_000320.1 vs. uniprot
Match: D7FIH7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIH7_ECTSI)

HSP 1 Score: 375 bits (964), Expect = 9.180e-126
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 1 
Query:   31 MNSVLICNPDGKLLLSRYFEAQSHGSECAFEPSSGGEHTAAGSLRDTAKGRSSTLSEVLGQTRHLWTKGTSECPQVARAKGGLIIVFGAVEDLLLFLCGSGECDELTLADMLATLAKVIVALCRQGGKHQRATETAFLSSNGTSSIYSKACLVIDEMIPGGILESLDSDAILSSIKLQKPTSAAPVAGSKKGR 609
            MNSVLICNPDGKLLLSRYFEAQSHGSECAFEPSSGGEHTAAGSLRDTAKGRSSTLSEVLGQTRHLWTKGTSECPQVARAKGGLIIVFGAVEDLLLFLCGSGECDELTLADMLATLAKVIVALCRQGGKHQRATETAFLSSNGTSSIYSKACLVIDEMIPGGILESLDSDAILSSIKLQKPTSAAPVAGSKKGR
Sbjct:    1 MNSVLICNPDGKLLLSRYFEAQSHGSECAFEPSSGGEHTAAGSLRDTAKGRSSTLSEVLGQTRHLWTKGTSECPQVARAKGGLIIVFGAVEDLLLFLCGSGECDELTLADMLATLAKVIVALCRQGGKHQRATETAFLSSNGTSSIYSKACLVIDEMIPGGILESLDSDAILSSIKLQKPTSAAPVAGSKKGR 193
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BLAST of Ec-28_000320.1 vs. uniprot
Match: A0A835YRG5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRG5_9STRA)

HSP 1 Score: 103 bits (258), Expect = 3.050e-22
Identity = 71/183 (38.80%), Postives = 97/183 (53.01%), Query Frame = 1 
Query:   31 MNSVLICNPDGKLLLSRYFEAQSHGSECAFEPSSGGEHTAAGSLRDTAKGRSSTLS----EVLGQTRHLWTKGTSECPQVARAKGGLIIVFGAVEDLLLFLCGSGECDELTLADMLATLAKVIVALCRQGG-KHQRATETAFLSSNGTSSIYSKACLVIDEMIPGGILESLDSDAILSSIKLQ 564
            M+S+LI N  G LL+ RYF+      EC           A   L D A  R   +     EV  QTR +W +      QVAR    +II++  + DLL+F CG  +CDELTL+D++  L  VI  LC     K  R TE+  +  +     Y+K  L +DEM+PGGILE+LD DA+LS  K++
Sbjct:    3 MHSLLILNERGHLLMGRYFDEV---LECG----------ALQHLGDVASDREQCMQWWEDEVRQQTREMW-QFAHTANQVARGADDVIIIYRRIGDLLVFACGRDDCDELTLSDVVDCLGGVIATLCEDSSAKGARPTESWLMIGD----TYAKVALAVDEMMPGGILEALDPDAVLSMTKMR 167
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BLAST of Ec-28_000320.1 vs. uniprot
Match: A0A061QRI4_9CHLO (Coatomer subunit zeta n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QRI4_9CHLO)

HSP 1 Score: 57.8 bits (138), Expect = 2.660e-6
Identity = 30/100 (30.00%), Postives = 52/100 (52.00%), Query Frame = 1 
Query:  271 GGLIIVFGAVEDLLLFLCGSGECDELTLADMLATLAKVIVALCRQGGKHQRATETAFLSSNGTSSIYSKACLVIDEMIPGGILESLDSDAILSSIKLQKP 570
            G   IV+  V D++LFL GSGE DEL L+ ++  +   + A  ++        E            Y+K C+ +DE++  G+L+ +D + I  ++KL+ P
Sbjct:   61 GDACIVYSPVADIILFLMGSGEYDELMLSSIIRVIKDALKATLKKSPSEAAVCEK-----------YAKVCVTLDEVVNEGVLDMVDPELIRKAVKLKAP 149
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BLAST of Ec-28_000320.1 vs. uniprot
Match: A0A8J4PU78_9MYCE (Clat_adaptor_s domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PU78_9MYCE)

HSP 1 Score: 57.8 bits (138), Expect = 2.770e-6
Identity = 51/183 (27.87%), Postives = 83/183 (45.36%), Query Frame = 1 
Query:   31 MNSVLICNPDGKLLLSRYFEAQSHGSECAFEPSSGGEHTAAGSLRDTAKGRSSTLSEVLGQ-TRHLWTKGTSECPQVARAKGGLIIVFGAVEDLLLFLCGSGECDELTLADMLATLAKVIVALCRQGGKHQRATETAFLSSNGTSSIYSKACLVIDEMIPGGILESLDSDAI--LSSIKLQKP 570
            +N++LI N +G +L S+Y+ + +   +  FE                         ++L Q T+  W     E   V    GG + V+  V DLLLF+ GS E DEL L+D+L  +   I  +C++ G     TET ++          K  L +DE+I  G L+ +  + +   SS+K  +P
Sbjct:    2 INTILITNWNGNILFSKYYNSITEEKQIEFE-------------------------KLLYQFTKDEWLNSKGEKHLVTEF-GGSVTVYTNVGDLLLFVSGSDEYDELALSDILIPITDSIKDMCKKKG----VTETHYIEQ------IPKFVLYLDEIIQRGQLDQVQFEIVSNYSSLKHDQP 148
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BLAST of Ec-28_000320.1 vs. uniprot
Match: TSTD_DICDI (TSET complex member tstD n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=TSTD_DICDI)

HSP 1 Score: 57.4 bits (137), Expect = 3.770e-6
Identity = 51/183 (27.87%), Postives = 83/183 (45.36%), Query Frame = 1 
Query:   31 MNSVLICNPDGKLLLSRYFEAQSHGSECAFEPSSGGEHTAAGSLRDTAKGRSSTLSEVLGQ-TRHLWTKGTSECPQVARAKGGLIIVFGAVEDLLLFLCGSGECDELTLADMLATLAKVIVALCRQGGKHQRATETAFLSSNGTSSIYSKACLVIDEMIPGGILESLDSDAI--LSSIKLQKP 570
            +NS+LI N +G ++ S+Y+   +   +  +E                         ++L Q T+  W    +E   V    G  I VF  V DL+LFLCGS E DEL L+D+   + + +  +C++ G     TE  F+          K  L +DE+I  G L+ +  ++I   SS+K  +P
Sbjct:    2 INSLLITNNNGNIVFSKYYSNINDEKQSEYE-------------------------KLLYQFTKDEWVNSKNEKHLVTEFSG-YITVFTNVGDLMLFLCGSEEMDELALSDVFFPIIESLKDICKKKG----VTEQNFIEQ------IPKFILYLDEIIQRGHLDQVQLESIQNYSSLKHDQP 148
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BLAST of Ec-28_000320.1 vs. uniprot
Match: A0A1V9ZFW8_9STRA (Coatomer subunit zeta n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZFW8_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 6.830e-6
Identity = 57/190 (30.00%), Postives = 85/190 (44.74%), Query Frame = 1 
Query:   31 MNSVLICNPDGKLLLSRYFEAQSHGSECAFEPSSGGEHTAAGSLRDTAKGRSSTLSEVLGQTRHLWTKGTSECPQVARAKGGLIIV------FGAVEDLLLFLCGSGECDELTLADMLATLAKVIVALCRQGGKHQRATETAFLSSNGTSSIYSKACLVIDEMIPGGILESLDSDAILSSIKLQK-PTSA 579
            M+S+L+C   G +LL RYF A +   + AFE +                     L   L      W+   +  P  A A+  L++V      +  + DL+ FL GS E DEL L D+LA +  V       G   +R TE  FL+       +SK  + +D+M+  G L++LD   +L   KL+  PT A
Sbjct:    2 MHSLLVCTDKGHVLLGRYFRATTTEEKRAFEQA---------------------LYTALD-----WSVLQAVAPD-ADAQTHLVVVLKQFVVYRKLGDLVWFLAGSLEYDELILHDVLANILAVAA-----GHMEKRCTEALFLAH------HSKILVSLDDMVHQGHLDTLDVATVLQMTKLKPYPTKA 153
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BLAST of Ec-28_000320.1 vs. uniprot
Match: F0ZIR6_DICPU (Clat_adaptor_s domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZIR6_DICPU)

HSP 1 Score: 56.2 bits (134), Expect = 9.480e-6
Identity = 48/179 (26.82%), Postives = 80/179 (44.69%), Query Frame = 1 
Query:   31 MNSVLICNPDGKLLLSRYFEAQSHGSECAFEPSSGGEHTAAGSLRDTAKGRSSTLSEVLGQ-TRHLWTKGTSECPQVARAKGGLIIVFGAVEDLLLFLCGSGECDELTLADMLATLAKVIVALCRQGGKHQRATETAFLSSNGTSSIYSKACLVIDEMIPGGILESLDSDAILSSIKLQ 564
            +N++LI N +G  + S+Y+   +   +  +E                         ++L Q T+  W    +E   V    G  I VF  V DL+LFLCGS E DEL L+D+L  + + +  +C++ G     TE  F+          K  L +DE+I  G L+ +  ++I +   L+
Sbjct:    2 INNLLITNLNGNSVFSKYYNNLNEEKQSEYE-------------------------KLLYQFTKEEWGNAKNEKHLVTEFSG-YITVFTGVGDLMLFLCGSDEYDELALSDILIPIVESLKDICKKKG----VTEAYFIEQ------IPKFILYLDEIIQRGHLDQVQLESIQNYFALK 144
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BLAST of Ec-28_000320.1 vs. uniprot
Match: A0A151ZAK2_9MYCE (Clat_adaptor_s domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZAK2_9MYCE)

HSP 1 Score: 55.8 bits (133), Expect = 1.290e-5
Identity = 49/183 (26.78%), Postives = 83/183 (45.36%), Query Frame = 1 
Query:   31 MNSVLICNPDGKLLLSRYFEAQSHGSECAFEPSSGGEHTAAGSLRDTAKGRSSTLSEVLGQ-TRHLWTKGTSECPQVARAKGGLIIVFGAVEDLLLFLCGSGECDELTLADMLATLAKVIVALCRQGGKHQRATETAFLSSNGTSSIYSKACLVIDEMIPGGILESLDSDAIL--SSIKLQKP 570
            +N++LI N +G ++ S+Y+   +   +  FE                         ++  Q T+  W+    E   V    G  I VF  V DL++FLCGS E DEL L++++  L + I  +C++ G     TE  F+          K  L +DE+I  G ++    ++IL  S++K  +P
Sbjct:    2 INNLLITNLNGNIVFSKYYNILTEEKQIEFE-------------------------KLTYQFTKDEWSFAKGEKHLVTEFSGNKI-VFTNVGDLMIFLCGSNEYDELALSEIIFPLMETIKEVCKKKG----VTEAHFIEQ------IPKFVLYLDEIIQKGQIDQTQIESILNYSALKHDQP 148
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BLAST of Ec-28_000320.1 vs. uniprot
Match: A0A7S2XYC8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYC8_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 8.990e-5
Identity = 26/71 (36.62%), Postives = 42/71 (59.15%), Query Frame = 1 
Query:  199 EVLGQTRHLWTKGTSECPQVARAKGGLIIVFGAVEDLLLFLCGSGECDELTLADMLATLAKVIVALCRQGG 411
            E+L  TR LW        Q+ARA+  +II F ++ DLL+F+ G+ E DE+ L +++  + ++I   C  GG
Sbjct:    5 ELLRATRQLWDPARYSI-QIARAQKDIIIAFKSINDLLIFVSGTEEYDEIILGEIVVDMMEIIAVHCSGGG 74
The following BLAST results are available for this feature:
BLAST of Ec-28_000320.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7FIH7_ECTSI9.180e-126100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YRG5_9STRA3.050e-2238.80Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A061QRI4_9CHLO2.660e-630.00Coatomer subunit zeta n=2 Tax=Tetraselmis sp. GSL0... [more]
A0A8J4PU78_9MYCE2.770e-627.87Clat_adaptor_s domain-containing protein n=1 Tax=P... [more]
TSTD_DICDI3.770e-627.87TSET complex member tstD n=1 Tax=Dictyostelium dis... [more]
A0A1V9ZFW8_9STRA6.830e-630.00Coatomer subunit zeta n=1 Tax=Achlya hypogyna TaxI... [more]
F0ZIR6_DICPU9.480e-626.82Clat_adaptor_s domain-containing protein n=1 Tax=D... [more]
A0A151ZAK2_9MYCE1.290e-526.78Clat_adaptor_s domain-containing protein n=1 Tax=T... [more]
A0A7S2XYC8_9STRA8.990e-536.62Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:374766..377422 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score72.0
Seed ortholog evalue3.4e-10
Seed eggNOG ortholog65071.PYU1_T013871
Length1689
KEGG koko:K20472
Hectar predicted targeting categoryother localisation
Gene idEc-28_000320.1
EggNOG free text desc.Longin. Source PGD
EggNOG OGs1MGTF@121069,29XBH@1,2RXRG@2759
COG Functional cat.T
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_000320Ec-28_000320Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_28 374766..377422 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000320.1Ec-28_000320.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_28 374797..376346 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000320.1.1Ec-28_000320.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 374766..375036 +
Ec-28_000320.1.2Ec-28_000320.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 375434..375598 +
Ec-28_000320.1.3Ec-28_000320.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 376170..377422 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0003205UTR:Ec-28_000320.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_28 374766..374796 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000320.1CDS:Ec-28_000320.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_28 374797..375036 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0003203UTR:Ec-28_000320.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_28 376347..377422 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-28_000320.1 ID=Ec-28_000320.1|Name=Ec-28_000320.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=194bp
MNSVLICNPDGKLLLSRYFEAQSHGSECAFEPSSGGEHTAAGSLRDTAKG
RSSTLSEVLGQTRHLWTKGTSECPQVARAKGGLIIVFGAVEDLLLFLCGS
GECDELTLADMLATLAKVIVALCRQGGKHQRATETAFLSSNGTSSIYSKA
CLVIDEMIPGGILESLDSDAILSSIKLQKPTSAAPVAGSKKGR*
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spliced messenger RNA

>Ec-28_000320.1 ID=Ec-28_000320.1|Name=Ec-28_000320.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1689bp|location=Sequence derived from alignment at chr_28:374766..377422+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
TAGAGTGGCGTGCTTTCGACCAGCAGGACCGATGAACAGCGTGCTCATCT
GCAACCCGGACGGGAAGCTTCTCCTGTCGAGGTATTTCGAGGCACAGAGT
CATGGATCAGAGTGCGCTTTCGAACCCTCCTCAGGCGGTGAACACACGGC
GGCGGGTTCGTTGAGAGATACCGCCAAGGGTCGAAGCTCAACCCTTTCGG
AAGTGCTGGGGCAGACGAGGCATCTCTGGACGAAGGGCACGTCAGAGTGC
CCTCAGGTCGCCCGGGCTAAGGGAGGGCTGATCATTGTGTTTGGAGCAGT
AGAAGATCTCCTCCTGTTCCTGTGCGGCTCTGGGGAATGTGACGAGCTTA
CTTTGGCTGACATGCTGGCAACGCTTGCGAAGGTCATTGTGGCCTTGTGC
AGACAGGGCGGCAAACACCAGAGGGCCACGGAAACGGCTTTCCTGTCGAG
CAACGGCACGAGCAGCATCTACAGCAAGGCCTGCCTCGTCATCGACGAAA
TGATTCCCGGGGGTATCCTGGAATCCCTAGACTCTGACGCCATCTTGAGT
TCTATCAAGCTGCAAAAACCCACCTCAGCAGCACCGGTTGCCGGCTCGAA
AAAGGGGCGATGAGACATCGTCTGGAGATTCCCCCGCGTTTACTTCCGTC
AACTGGAGCCTAGCTTACGAAGCCGGCTACAGTCAACTTGACGCCGTAGG
CAAGGTTACATCCAAGGCTGGTATTCTCGTCATAGCTGGGCAAGTTTGTT
TGAAGTACATATCCTGTACAGTAGTAGCAGTGTGGTTGGTTTGCTAAGGC
CTGGGGTAGCAGTTCTTGGGCTGCCAGCTGGGCTGCCGTTCTTTCTCAAG
TTTACATGCGTCTCTTGGAACAGGCGCGTGATGTGCGTGTTGGTATTGGC
TTTCCATCGGGCTAAGGGAGGATAAAGAGTTGGTGGCGTGGATTGTGCAC
AACCCATCGAAAGGGATAAGGGTCCGCCTACGGGGAACTGAAAAGCGGGT
ACACTTCCTTACTCCACGCAAAGATTCGTGGTCTATTCCGCAACAATAAG
GCTATGGAGCAGTACATATTTGCACCTCTACTGTAGATGTCAAGGAGCGC
AATCAATCGTAAACATAGCACAGCCTGCAGCCCTAACATTGTGACCTGAT
CGTATGGCACAACAGCGAACAAGAACAACACGCCTACTGCCTAGAGCAAA
GAGGGTTGCACGTGACCGTTGGACCAACAAAACCTGGTTTGTTTTCACTC
TGTAGGCCCGTCCCTGCCCCGAACCTTGGAGTTGCCACTGGCCTCCTTGA
TGACAAATGGCATGTAGATACCATGAGGGACACACATTAAAACTGAAATG
AATGATGCATCAATTCATCATCTGTTGTTTCCCCGCTGGCACACACCTTG
TTGCGGACGGTGACTCAAAATCTCGTCAGCGGTATTCAGCACAATGCTCT
ATTTACTGCGACCGCGTAGTTTTCCCGACCGCATCGCAGTGCGAAGTCGT
GACCTCAACATCTCACGTTTTTAGACTAGCCAAGCAACATGGTCACGAGC
TGGGGTAGAAACGACCAGCCCGTACACGAGCAGAAACAGGTCGAGCGAGT
GCGCCTGAAGAAAACAAAGTGGCACTACAGCACGCGTGTATGTAAATCCA
ACAAGAGCCATTGTGGAAAAGAGGGAATCGTCCTCGACA
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protein sequence of Ec-28_000320.1

>Ec-28_000320.1 ID=Ec-28_000320.1|Name=Ec-28_000320.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=194bp
MNSVLICNPDGKLLLSRYFEAQSHGSECAFEPSSGGEHTAAGSLRDTAKG
RSSTLSEVLGQTRHLWTKGTSECPQVARAKGGLIIVFGAVEDLLLFLCGS
GECDELTLADMLATLAKVIVALCRQGGKHQRATETAFLSSNGTSSIYSKA
CLVIDEMIPGGILESLDSDAILSSIKLQKPTSAAPVAGSKKGR*
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mRNA from alignment at chr_28:374766..377422+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-28_000320.1 ID=Ec-28_000320.1|Name=Ec-28_000320.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2657bp|location=Sequence derived from alignment at chr_28:374766..377422+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
TAGAGTGGCGTGCTTTCGACCAGCAGGACCGATGAACAGCGTGCTCATCT
GCAACCCGGACGGGAAGCTTCTCCTGTCGAGGTATTTCGAGGCACAGAGT
CATGGATCAGAGTGCGCTTTCGAACCCTCCTCAGGCGGTGAACACACGGC
GGCGGGTTCGTTGAGAGATACCGCCAAGGGTCGAAGCTCAACCCTTTCGG
AAGTGCTGGGGCAGACGAGGCATCTCTGGACGAAGGGCACGTCAGAGTGC
CCTCAGGTCGCCCGGGCTAAGGTGTGGATCGTGAATCAGTTGGGACGAAC
CTGCTGTGTTGGAGTAGCCTACTCAGAGATACACACGCGATCATGCCTTG
AATAGAGCCAGCCCGAACAGCGGTTCAACATCCGCAACCTGCGACGGCAA
GGGTGCCCACTGTCTATGGCCACCGTACAAATATAAGAGGGTGGCTCCGT
GGACAGCCGCATTCTTGCTTCCTTCCTCGTCCCAGCATTGATACCATAGC
AATATAACCAATGTTTTGTTCCAGGTTTTTCGTTTCGTCCTCGCCAGCCC
ACCCACAACTCCGTACACCAGTACAGAGCCGGAAAAAAGTAGACTACATC
ATTCATTGCGCTGCTCAAACACGCCACACACGGGACGGCAATGCTTGTGG
GTGAATTGCGCATGGCAGGGAGGGCTGATCATTGTGTTTGGAGCAGTAGA
AGATCTCCTCCTGTTCCTGTGCGGCTCTGGGGAATGTGACGAGCTTACTT
TGGCTGACATGCTGGCAACGCTTGCGAAGGTCATTGTGGCCTTGTGCAGA
CAGGGCGGCAAACACCAGAGGGCCACGGAAACGGTGGGTACTGCAACAAC
CTGTTCCCCATTTGGCAAGAGCTGAACGTCGGGTTGCACATGGGGCAGCG
AGAGCATCGTGTAATGTGTCAAAGCGGGGGCCCTATCTCACGTTTACTCA
CAAAGTAGTGCATACACAAGTTTAGTGTTTGCTGCACGATTCTGTGACGC
TTTTCAGCGATGGGCACGTGTGTCTTGCACAAGTATCTCACGATGATCAT
GGGGGCAAACGTGGAGCGACACCTCGCGGTGAAAACATACCAGTTCAATA
GTGCGATTTTCAGTACACAACCAAAAGTGCGGCTCTACAGTAGTAGTGCA
TATGCACCTGTAGGGTTTACCGCGATCGAGCGCAGCTCAATGTGCTAGTA
TATTTTGGGTGTGTTGACTTTTTGTGCTGACTCGGTCGTAAAAATCGCAA
GCCCTTCGGGCTTACCAAATGTCTATGTACTGTACGCCCCCCATGTTGCT
TCCTCCAGCTAGCTCGTTTCCACTGAACTCAACGTTGTGCCTCACTCGCT
TGCATTGCCGTGTCCGCAATGACAACACGCGACGGTACGACTGATCACGA
GCAGGCTTTCCTGTCGAGCAACGGCACGAGCAGCATCTACAGCAAGGCCT
GCCTCGTCATCGACGAAATGATTCCCGGGGGTATCCTGGAATCCCTAGAC
TCTGACGCCATCTTGAGTTCTATCAAGCTGCAAAAACCCACCTCAGCAGC
ACCGGTTGCCGGCTCGAAAAAGGGGCGATGAGACATCGTCTGGAGATTCC
CCCGCGTTTACTTCCGTCAACTGGAGCCTAGCTTACGAAGCCGGCTACAG
TCAACTTGACGCCGTAGGCAAGGTTACATCCAAGGCTGGTATTCTCGTCA
TAGCTGGGCAAGTTTGTTTGAAGTACATATCCTGTACAGTAGTAGCAGTG
TGGTTGGTTTGCTAAGGCCTGGGGTAGCAGTTCTTGGGCTGCCAGCTGGG
CTGCCGTTCTTTCTCAAGTTTACATGCGTCTCTTGGAACAGGCGCGTGAT
GTGCGTGTTGGTATTGGCTTTCCATCGGGCTAAGGGAGGATAAAGAGTTG
GTGGCGTGGATTGTGCACAACCCATCGAAAGGGATAAGGGTCCGCCTACG
GGGAACTGAAAAGCGGGTACACTTCCTTACTCCACGCAAAGATTCGTGGT
CTATTCCGCAACAATAAGGCTATGGAGCAGTACATATTTGCACCTCTACT
GTAGATGTCAAGGAGCGCAATCAATCGTAAACATAGCACAGCCTGCAGCC
CTAACATTGTGACCTGATCGTATGGCACAACAGCGAACAAGAACAACACG
CCTACTGCCTAGAGCAAAGAGGGTTGCACGTGACCGTTGGACCAACAAAA
CCTGGTTTGTTTTCACTCTGTAGGCCCGTCCCTGCCCCGAACCTTGGAGT
TGCCACTGGCCTCCTTGATGACAAATGGCATGTAGATACCATGAGGGACA
CACATTAAAACTGAAATGAATGATGCATCAATTCATCATCTGTTGTTTCC
CCGCTGGCACACACCTTGTTGCGGACGGTGACTCAAAATCTCGTCAGCGG
TATTCAGCACAATGCTCTATTTACTGCGACCGCGTAGTTTTCCCGACCGC
ATCGCAGTGCGAAGTCGTGACCTCAACATCTCACGTTTTTAGACTAGCCA
AGCAACATGGTCACGAGCTGGGGTAGAAACGACCAGCCCGTACACGAGCA
GAAACAGGTCGAGCGAGTGCGCCTGAAGAAAACAAAGTGGCACTACAGCA
CGCGTGTATGTAAATCCAACAAGAGCCATTGTGGAAAAGAGGGAATCGTC
CTCGACA
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Coding sequence (CDS) from alignment at chr_28:374766..377422+

>Ec-28_000320.1 ID=Ec-28_000320.1|Name=Ec-28_000320.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=582bp|location=Sequence derived from alignment at chr_28:374766..377422+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGAACAGCGTGCTCATCTGCAACCCGGACGGGAAGCTTCTCCTGTCGAG
GTATTTCGAGGCACAGAGTCATGGATCAGAGTGCGCTTTCGAACCCTCCT
CAGGCGGTGAACACACGGCGGCGGGTTCGTTGAGAGATACCGCCAAGGGT
CGAAGCTCAACCCTTTCGGAAGTGCTGGGGCAGACGAGGCATCTCTGGAC
GAAGGGCACGTCAGAGTGCCCTCAGGTCGCCCGGGCTAAGGGAGGGCTGA
TCATTGTGTTTGGAGCAGTAGAAGATCTCCTCCTGTTCCTGTGCGGCTCT
GGGGAATGTGACGAGCTTACTTTGGCTGACATGCTGGCAACGCTTGCGAA
GGTCATTGTGGCCTTGTGCAGACAGGGCGGCAAACACCAGAGGGCCACGG
AAACGGCTTTCCTGTCGAGCAACGGCACGAGCAGCATCTACAGCAAGGCC
TGCCTCGTCATCGACGAAATGATTCCCGGGGGTATCCTGGAATCCCTAGA
CTCTGACGCCATCTTGAGTTCTATCAAGCTGCAAAAACCCACCTCAGCAG
CACCGGTTGCCGGCTCGAAAAAGGGGCGATGA
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Synonyms
The feature 'Ec-28_000320.1' has the following synonyms
Synonym
Esi0120_0060
Esi_0120_0060