Ec-28_000310.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-28_000310.1
Unique NameEc-28_000310.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length473
Homology
[Close]
BLAST of Ec-28_000310.1 vs. uniprot
Match: A0A6H5JR55_9PHAE (LETM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR55_9PHAE)

HSP 1 Score: 822 bits (2123), Expect = 3.550e-290
Identity = 445/472 (94.28%), Postives = 452/472 (95.76%), Query Frame = 3 
Query:  135 MLQVRHVVRNGKIILVYVLASSRRRCLPTFAARAHGLHNNRPDHSSASGSVESGALNRTTSPSDDKLAKETHRRTDSPAEXXXXXXXXXXXXXXXXXXXXXXXXXXXRKLVAADKKSVRRSVKELIAQFTKGTKVLWLDFKGSRQTKAKKRAGQVLTFQENRQLRQVGRDLAKALPVLTVFSLPIAGYLAPALGYIFPKTMLPPQFWTSPQRLRFMLEDAKKQEVSSFPKLLQHLAMMASSPRPNSSPGQLQFSAKWFWKEGSLDRLPRQHLLQLIKSCNTVPPFKRATARFAPKSSLVSWLTTEATSISNDDLALRKQFYDEAKARISGQEEGSKLNLTAPEVLLLCWERGLLRSQHWPDAHLRWAADGATSGSAGTAVDEPIPEAEAKAMLGSLRAYLSLYDSPSATRNLRGRSLDDSVGADYDVLSSCGTGAALPPSMVLHAPALLRITHSANGSASPLCHLRVESATR 1550
            MLQVRHVVRNGK+ILVYVLASSRRRCLPTFAARAH L+NNRPDHS+ASG VESGAL RTTSPSDDKLAKET RRTDSPAE      XXXXXXXXXXXXXX       RKLVAADKKS RRSVKELIAQFTKGTKVLWLDFKGSRQTKAKKRAGQVLTFQENRQLRQVGRDLAKALPVLTVFSLPIAGYLAPALGYIFPKTMLPPQFWTSPQRLRFMLEDAKKQEVSSFPKLLQHLAMMASSPRPNSSPGQLQFSA WFWKEG+L+RL R+HLLQL+KSCNTVPPFKRATARFAPKSSLVSWLTTEATSISNDDLALRKQFYDEAKARISGQEEGSKLNLTAPEVLLLCWERGLLRSQHWPDAHLRWAADGATSGSAGTAVDEPIPEAEAKAMLGSLRAYLSLYDSPSATRNLRGRSLDDSVGADYDVLSSCGTGAALPPSMVLHAPALLRITHSANGSASPLCHLRVESATR
Sbjct:    1 MLQVRHVVRNGKVILVYVLASSRRRCLPTFAARAHSLNNNRPDHSNASGPVESGALTRTTSPSDDKLAKETRRRTDSPAESPTNGTXXXXXXXXXXXXXXSN-----RKLVAADKKSARRSVKELIAQFTKGTKVLWLDFKGSRQTKAKKRAGQVLTFQENRQLRQVGRDLAKALPVLTVFSLPIAGYLAPALGYIFPKTMLPPQFWTSPQRLRFMLEDAKKQEVSSFPKLLQHLAMMASSPRPNSSPGQLQFSATWFWKEGNLNRLSREHLLQLMKSCNTVPPFKRATARFAPKSSLVSWLTTEATSISNDDLALRKQFYDEAKARISGQEEGSKLNLTAPEVLLLCWERGLLRSQHWPDAHLRWAADGATSGSAGTAVDEPIPEAEAKAMLGSLRAYLSLYDSPSATRNLRGRSLDDSVGADYDVLSSCGTGAALPPSMVLHAPALLRITHSANGSASPLCHLRVESATR 467
[Close]
BLAST of Ec-28_000310.1 vs. uniprot
Match: D7FIH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH6_ECTSI)

HSP 1 Score: 541 bits (1394), Expect = 2.440e-183
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 3 
Query:  735 MLPPQFWTSPQRLRFMLEDAKKQEVSSFPKLLQHLAMMASSPRPNSSPGQLQFSAKWFWKEGSLDRLPRQHLLQLIKSCNTVPPFKRATARFAPKSSLVSWLTTEATSISNDDLALRKQFYDEAKARISGQEEGSKLNLTAPEVLLLCWERGLLRSQHWPDAHLRWAADGATSGSAGTAVDEPIPEAEAKAMLGSLRAYLSLYDSPSATRNLRGRSLDDSVGADYDVLSSCGTGAALPPSMVLHAPALLRITHSANGSASPLCHLRVESATR 1550
            MLPPQFWTSPQRLRFMLEDAKKQEVSSFPKLLQHLAMMASSPRPNSSPGQLQFSAKWFWKEGSLDRLPRQHLLQLIKSCNTVPPFKRATARFAPKSSLVSWLTTEATSISNDDLALRKQFYDEAKARISGQEEGSKLNLTAPEVLLLCWERGLLRSQHWPDAHLRWAADGATSGSAGTAVDEPIPEAEAKAMLGSLRAYLSLYDSPSATRNLRGRSLDDSVGADYDVLSSCGTGAALPPSMVLHAPALLRITHSANGSASPLCHLRVESATR
Sbjct:    1 MLPPQFWTSPQRLRFMLEDAKKQEVSSFPKLLQHLAMMASSPRPNSSPGQLQFSAKWFWKEGSLDRLPRQHLLQLIKSCNTVPPFKRATARFAPKSSLVSWLTTEATSISNDDLALRKQFYDEAKARISGQEEGSKLNLTAPEVLLLCWERGLLRSQHWPDAHLRWAADGATSGSAGTAVDEPIPEAEAKAMLGSLRAYLSLYDSPSATRNLRGRSLDDSVGADYDVLSSCGTGAALPPSMVLHAPALLRITHSANGSASPLCHLRVESATR 272
[Close]
BLAST of Ec-28_000310.1 vs. uniprot
Match: A0A6H5KW40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW40_9PHAE)

HSP 1 Score: 308 bits (788), Expect = 8.810e-95
Identity = 154/175 (88.00%), Postives = 159/175 (90.86%), Query Frame = 1 
Query: 2542 EETTLRKKVRSEDHLEIYGKLKEGIGMKKYLDGPMDYAKKLKLQFRVGDLDLPERRKRYTSRRREEEEDRHTCPCGKSEESRPHIVGECELYRKESEDLEEEMRQRGCDMDKFGKLDNSEKTIAIIGDRWWAQEALEDGDKMCKKFLWSLWQKRKELPNVGGVSSRCRNGAPSRK 3066
            EE TLRKKVRSEDHLEIYGKLKEGIG K YLDGPMDYAKKLKLQFRVGDLDLPERRKRY+S       DR TCPCGKSEESRPHIVGECELYRKE EDLEE+MRQRGCDMDKFGKLDNSEKTIA IGDRWWAQEA+EDGD MCK+FL SLWQKR+ELPNVGGVSSR RNGAPSRK
Sbjct:    7 EEATLRKKVRSEDHLEIYGKLKEGIGRKSYLDGPMDYAKKLKLQFRVGDLDLPERRKRYSSXXXXXXXDRQTCPCGKSEESRPHIVGECELYRKEREDLEEDMRQRGCDMDKFGKLDNSEKTIAGIGDRWWAQEAVEDGDNMCKEFLCSLWQKREELPNVGGVSSRGRNGAPSRK 181
[Close]
BLAST of Ec-28_000310.1 vs. uniprot
Match: D7G873_ECTSI (Chromodomain-helicase-DNA-binding protein 8 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G873_ECTSI)

HSP 1 Score: 340 bits (872), Expect = 4.380e-94
Identity = 168/170 (98.82%), Postives = 168/170 (98.82%), Query Frame = 1 
Query: 2512 TKVKEMLESREETTLRKKVRSEDHLEIYGKLKEGIGMKKYLDGPMDYAKKLKLQFRVGDLDLPERRKRYTSRRREEEEDRHTCPCGKSEESRPHIVGECELYRKESEDLEEEMRQRGCDMDKFGKLDNSEKTIAIIGDRWWAQEALEDGDKMCKKFLWSLWQKRKELPNV 3021
            TKVKEMLESREETTLRKKVRSEDHLEIYGKLKEGIGMKKYLDGPMDYAKKLKLQFRVGDLDLPERRKRYTSRRREEEEDRHTCPCGKSEESRPHIVGECELYRKE EDLEEEMRQRGCDMDKFGKLDNSEKTIAIIGDRWWAQEALEDGDKMCKKFLWSLWQKRKELPN 
Sbjct: 1386 TKVKEMLESREETTLRKKVRSEDHLEIYGKLKEGIGMKKYLDGPMDYAKKLKLQFRVGDLDLPERRKRYTSRRREEEEDRHTCPCGKSEESRPHIVGECELYRKEREDLEEEMRQRGCDMDKFGKLDNSEKTIAIIGDRWWAQEALEDGDKMCKKFLWSLWQKRKELPNA 1555
[Close]
BLAST of Ec-28_000310.1 vs. uniprot
Match: A0A6H5KD64_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD64_9PHAE)

HSP 1 Score: 321 bits (822), Expect = 2.870e-92
Identity = 159/184 (86.41%), Postives = 168/184 (91.30%), Query Frame = 1 
Query: 2515 KVKEMLESREETTLRKKVRSEDHLEIYGKLKEGIGMKKYLDGPMDYAKKLKLQFRVGDLDLPERRKRYTSRRREEEEDRHTCPCGKSEESRPHIVGECELYRKESEDLEEEMRQRGCDMDKFGKLDNSEKTIAIIGDRWWAQEALEDGDKMCKKFLWSLWQKRKELPNVGGVSSRCRNGAPSRK 3066
            KVKEML SRE+ TLRKKVRSEDHLEIYGKLKEGIGMK YLDGPMDYAK+LKLQFRVGDLDLP+RRKRY+        DR TCPCGKSEESRPHIVGECELYRKE EDLEE+MRQRGCDMDKFGKLDNSEKTIA+IGDRWWAQEA+EDGD MCK+FL SLWQKRKELPNVGGVSSR RNG+PSRK
Sbjct:  583 KVKEMLASREDATLRKKVRSEDHLEIYGKLKEGIGMKSYLDGPMDYAKRLKLQFRVGDLDLPQRRKRYSXXXXXXXXDRQTCPCGKSEESRPHIVGECELYRKEREDLEEDMRQRGCDMDKFGKLDNSEKTIAVIGDRWWAQEAVEDGDNMCKEFLCSLWQKRKELPNVGGVSSRGRNGSPSRK 766
[Close]
BLAST of Ec-28_000310.1 vs. uniprot
Match: A0A6H5KW01_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW01_9PHAE)

HSP 1 Score: 313 bits (801), Expect = 5.830e-92
Identity = 160/184 (86.96%), Postives = 167/184 (90.76%), Query Frame = 1 
Query: 2515 KVKEMLESREETTLRKKVRSEDHLEIYGKLKEGIGMKKYLDGPMDYAKKLKLQFRVGDLDLPERRKRYTSRRREEEEDRHTCPCGKSEESRPHIVGECELYRKESEDLEEEMRQRGCDMDKFGKLDNSEKTIAIIGDRWWAQEALEDGDKMCKKFLWSLWQKRKELPNVGGVSSRCRNGAPSRK 3066
            KVKEMLESREE TLRKKVRS+DHLE YGKLKEGIGMK YLDGPMDYAKKLKLQFRVGDLDLPERRKRY+S       DR TCPCGKSEESRPHIVGECELYRKE EDLEE+MRQRG D+DKFGKLDNSE TIA+IG+RWWAQEA+EDGDKMCKK L SLWQKRKELPNVGGVSSR RNGAPSRK
Sbjct:  338 KVKEMLESREEATLRKKVRSKDHLETYGKLKEGIGMKSYLDGPMDYAKKLKLQFRVGDLDLPERRKRYSSXXXXXXXDRQTCPCGKSEESRPHIVGECELYRKEREDLEEDMRQRGFDLDKFGKLDNSE-TIAVIGNRWWAQEAVEDGDKMCKKCLCSLWQKRKELPNVGGVSSRGRNGAPSRK 520
[Close]
BLAST of Ec-28_000310.1 vs. uniprot
Match: A0A6H5KVQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVQ8_9PHAE)

HSP 1 Score: 324 bits (831), Expect = 1.750e-91
Identity = 161/184 (87.50%), Postives = 170/184 (92.39%), Query Frame = 1 
Query: 2515 KVKEMLESREETTLRKKVRSEDHLEIYGKLKEGIGMKKYLDGPMDYAKKLKLQFRVGDLDLPERRKRYTSRRREEEEDRHTCPCGKSEESRPHIVGECELYRKESEDLEEEMRQRGCDMDKFGKLDNSEKTIAIIGDRWWAQEALEDGDKMCKKFLWSLWQKRKELPNVGGVSSRCRNGAPSRK 3066
            KVKEMLESREE TLRKKVRSEDHLEIYGKLKEGIGMK YLDGPMDYAKKLKLQFRVGDLDLPERRKRY+S       DR +CPCGKSEESRPH VGECELYRKE EDLEE+MRQRGC+MDKFGK+D++EKTIA+IGDRWWAQEA+EDGDKMCKKFL SLWQKRKELPNVGGVSSR RNGAPSRK
Sbjct:  831 KVKEMLESREEATLRKKVRSEDHLEIYGKLKEGIGMKSYLDGPMDYAKKLKLQFRVGDLDLPERRKRYSSXXXXXXXDRQSCPCGKSEESRPHTVGECELYRKEREDLEEDMRQRGCEMDKFGKIDHNEKTIAVIGDRWWAQEAVEDGDKMCKKFLCSLWQKRKELPNVGGVSSRGRNGAPSRK 1014
[Close]
BLAST of Ec-28_000310.1 vs. uniprot
Match: A0A6H5J715_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J715_9PHAE)

HSP 1 Score: 301 bits (771), Expect = 9.900e-90
Identity = 149/168 (88.69%), Postives = 155/168 (92.26%), Query Frame = 1 
Query: 2515 KVKEMLESREETTLRKKVRSEDHLEIYGKLKEGIGMKKYLDGPMDYAKKLKLQFRVGDLDLPERRKRYTSRRREEEEDRHTCPCGKSEESRPHIVGECELYRKESEDLEEEMRQRGCDMDKFGKLDNSEKTIAIIGDRWWAQEALEDGDKMCKKFLWSLWQKRKELPN 3018
            KVKEMLESREETTLRKKVRSEDHLEIYGKLKEGIGMK YL+GPMDYAKKLKLQFRVGDLDLPERRKRY+S       DR TCPCGKSEESRPHIVGECELYRKE EDLEE+MRQRGCDMDKFGKLDNSE+TI +IGDRWWAQE +EDGDKMCKKFL SLWQKRKELPN
Sbjct:  202 KVKEMLESREETTLRKKVRSEDHLEIYGKLKEGIGMKSYLEGPMDYAKKLKLQFRVGDLDLPERRKRYSSXXXXXXXDRQTCPCGKSEESRPHIVGECELYRKEREDLEEDMRQRGCDMDKFGKLDNSEQTIVVIGDRWWAQETVEDGDKMCKKFLCSLWQKRKELPN 369
[Close]
BLAST of Ec-28_000310.1 vs. uniprot
Match: A0A6H5JGS1_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGS1_9PHAE)

HSP 1 Score: 323 bits (829), Expect = 1.020e-88
Identity = 163/184 (88.59%), Postives = 167/184 (90.76%), Query Frame = 1 
Query: 2515 KVKEMLESREETTLRKKVRSEDHLEIYGKLKEGIGMKKYLDGPMDYAKKLKLQFRVGDLDLPERRKRYTSRRREEEEDRHTCPCGKSEESRPHIVGECELYRKESEDLEEEMRQRGCDMDKFGKLDNSEKTIAIIGDRWWAQEALEDGDKMCKKFLWSLWQKRKELPNVGGVSSRCRNGAPSRK 3066
            KVKEMLESREE TLRKKVRSEDHLEIYGKLKEGIG K YLDGPMDYAKKLKLQFRVGDLDLPERRKRY+S       DR TCPCGKSEESRPHIVGECELYRKE EDLEE+MRQRGCDMDKFGKLDNSEKTIA+IGDRWWAQEA+EDGDK CKKFL SLWQKRKELPNVGGVS R  NGAPSRK
Sbjct: 1730 KVKEMLESREEATLRKKVRSEDHLEIYGKLKEGIGTKSYLDGPMDYAKKLKLQFRVGDLDLPERRKRYSSXXXXXXXDRQTCPCGKSEESRPHIVGECELYRKEREDLEEDMRQRGCDMDKFGKLDNSEKTIAVIGDRWWAQEAVEDGDKTCKKFLCSLWQKRKELPNVGGVSIRGGNGAPSRK 1913
[Close]
BLAST of Ec-28_000310.1 vs. uniprot
Match: A0A6H5JWP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWP1_9PHAE)

HSP 1 Score: 294 bits (752), Expect = 2.050e-88
Identity = 150/173 (86.71%), Postives = 156/173 (90.17%), Query Frame = 1 
Query: 2515 KVKEMLESREETTLRKKVRSEDHLEIYGKLKEGIGMKKYLDGPMDYAKKLKLQFRVGDLDLPERRKRYTSRRREEEEDRHTCPCGKSEESRPHIVGECELYRKESEDLEEEMRQRGCDMDKFGKLDNSEKTIAIIGDRWWAQEALEDGDKMCKKFLWSLWQKRKELPNVGGVS 3033
            KVKEMLESREE TLRKKVRS+DHLEIYGKLKEGIGMK YLDGPMDYAK+LKLQ RVGDLDL ERRKRY+        DR TCPCGKSEESRPHIVGECELYRKE EDLEE+MRQRGCDMDKFGKLDNSEKTIA+IGDR  AQEA+EDGDKMCKKFL SLWQKRKELPNVGGVS
Sbjct:  101 KVKEMLESREEATLRKKVRSDDHLEIYGKLKEGIGMKSYLDGPMDYAKRLKLQSRVGDLDLLERRKRYSXXXXXXXXDRQTCPCGKSEESRPHIVGECELYRKEREDLEEDMRQRGCDMDKFGKLDNSEKTIAVIGDRLRAQEAVEDGDKMCKKFLCSLWQKRKELPNVGGVS 273
The following BLAST results are available for this feature:
BLAST of Ec-28_000310.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JR55_9PHAE3.550e-29094.28LETM1 domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FIH6_ECTSI2.440e-183100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KW40_9PHAE8.810e-9588.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G873_ECTSI4.380e-9498.82Chromodomain-helicase-DNA-binding protein 8 n=2 Ta... [more]
A0A6H5KD64_9PHAE2.870e-9286.41Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KW01_9PHAE5.830e-9286.96Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KVQ8_9PHAE1.750e-9187.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J715_9PHAE9.900e-9088.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JGS1_9PHAE1.020e-8888.59Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JWP1_9PHAE2.050e-8886.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:368794..374645 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score113.2
Seed ortholog evalue3.3e-22
Seed eggNOG ortholog115417.EPrPW00000019188
Preferred nameLETMD1
Length3068
Hectar predicted targeting categorymitochondrion
Gene idEc-28_000310.1
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006873,GO:0006875,GO:0008150,GO:0009987,GO:0016020,GO:0019725,GO:0019866,GO:0030003,GO:0031090,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0048878,GO:0050801,GO:0055065,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0070013,GO:0098771
EggNOG free text desc.LETM1 domain-containing protein 1. Source PGD
EggNOG OGs1MDY9@121069,KOG4263@1,KOG4263@2759
COG Functional cat.T
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_000310Ec-28_000310Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_28 368794..374645 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000310.1Ec-28_000310.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_28 370308..374510 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000310.1.6Ec-28_000310.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 368794..370542 -
Ec-28_000310.1.5Ec-28_000310.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 370896..371150 -
Ec-28_000310.1.4Ec-28_000310.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 371616..371777 -
Ec-28_000310.1.3Ec-28_000310.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 372254..372366 -
Ec-28_000310.1.2Ec-28_000310.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 372919..373074 -
Ec-28_000310.1.1Ec-28_000310.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 374013..374645 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0003103UTR:Ec-28_000310.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_28 368794..370307 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000310.1CDS:Ec-28_000310.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_28 370308..370542 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0003105UTR:Ec-28_000310.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_28 374511..374645 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-28_000310.1 ID=Ec-28_000310.1|Name=Ec-28_000310.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=473bp
MLQVRHVVRNGKIILVYVLASSRRRCLPTFAARAHGLHNNRPDHSSASGS
VESGALNRTTSPSDDKLAKETHRRTDSPAESPTSGTSGTSSTGSNRNSNR
NSNSNSNRKLVAADKKSVRRSVKELIAQFTKGTKVLWLDFKGSRQTKAKK
RAGQVLTFQENRQLRQVGRDLAKALPVLTVFSLPIAGYLAPALGYIFPKT
MLPPQFWTSPQRLRFMLEDAKKQEVSSFPKLLQHLAMMASSPRPNSSPGQ
LQFSAKWFWKEGSLDRLPRQHLLQLIKSCNTVPPFKRATARFAPKSSLVS
WLTTEATSISNDDLALRKQFYDEAKARISGQEEGSKLNLTAPEVLLLCWE
RGLLRSQHWPDAHLRWAADGATSGSAGTAVDEPIPEAEAKAMLGSLRAYL
SLYDSPSATRNLRGRSLDDSVGADYDVLSSCGTGAALPPSMVLHAPALLR
ITHSANGSASPLCHLRVESATR*
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spliced messenger RNA

>Ec-28_000310.1 ID=Ec-28_000310.1|Name=Ec-28_000310.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3068bp|location=Sequence derived from alignment at chr_28:368794..374645- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
GTGCGCAGCGCACGCAACGTGCGTACAACGTGCAAAGCGCGTGTAGGCGT
CGAAACCACAAGCTGCTGATACCCCGATATACCTTGCATAAGCTCCTTGG
TTGTGTGGGGGTCTGCGGCGGCAGTGCCAGCTGAAATGCTTCAAGTGAGA
CACGTCGTCCGCAACGGGAAAATCATCCTCGTGTACGTTCTCGCCAGCAG
CAGACGACGATGCCTGCCGACATTTGCCGCCCGGGCTCACGGCTTGCACA
ACAACCGGCCAGACCACAGCAGTGCTAGTGGTTCAGTAGAGTCGGGCGCT
TTGAACAGAACCACGAGCCCTAGCGACGACAAGCTGGCCAAGGAAACGCA
CAGACGGACAGATTCTCCGGCCGAGAGCCCTACGAGCGGCACCAGCGGCA
CCAGCAGCACTGGCAGCAACCGCAACAGCAACCGCAACAGCAACAGCAAT
AGCAACAGGAAGTTGGTCGCAGCGGACAAGAAGAGCGTGAGGCGAAGTGT
CAAGGAGCTCATCGCTCAGTTCACGAAAGGAACCAAGGTGCTTTGGCTTG
ACTTCAAGGGGTCGAGGCAGACTAAGGCAAAGAAAAGAGCCGGCCAGGTA
CTCACTTTTCAGGAGAACCGGCAGCTACGTCAGGTCGGGCGAGACCTTGC
GAAGGCCTTGCCTGTCCTGACTGTGTTCTCGTTACCCATCGCGGGCTACC
TGGCGCCTGCACTCGGATACATCTTCCCCAAGACGATGCTCCCTCCGCAG
TTTTGGACCTCGCCGCAGAGACTTCGGTTCATGCTTGAGGATGCCAAGAA
GCAGGAAGTCTCATCTTTCCCAAAGCTTTTGCAGCACCTGGCAATGATGG
CGTCGTCTCCTCGGCCCAACAGCAGCCCAGGACAGCTGCAGTTTTCGGCC
AAGTGGTTCTGGAAGGAAGGCAGCTTGGACAGGTTGCCACGGCAGCACCT
TTTGCAACTAATAAAGTCTTGCAACACCGTGCCGCCATTCAAAAGGGCAA
CCGCCAGATTTGCTCCCAAGTCATCGCTGGTGTCCTGGCTTACCACTGAA
GCCACATCGATCAGCAACGACGATCTGGCTCTCAGAAAGCAGTTTTACGA
CGAAGCAAAAGCACGCATTTCCGGGCAGGAGGAAGGGTCGAAACTGAATC
TGACGGCTCCGGAAGTTCTGCTTCTATGCTGGGAGAGGGGGCTGTTGAGA
TCGCAGCACTGGCCGGACGCCCACCTGCGATGGGCAGCGGATGGTGCTAC
CAGTGGCAGCGCGGGTACTGCTGTCGACGAACCGATTCCGGAGGCAGAGG
CGAAAGCGATGCTCGGAAGCTTGAGAGCCTACCTGTCCCTCTACGATTCG
CCATCGGCGACTCGGAACCTGCGGGGCCGCTCCCTGGATGATTCTGTCGG
TGCCGATTACGATGTTTTGTCTTCATGCGGTACTGGCGCTGCCCTCCCGC
CATCGATGGTGTTGCACGCTCCAGCGTTGCTTCGCATCACGCATTCCGCC
AACGGCTCTGCTTCCCCCCTCTGCCATCTGCGAGTCGAGAGCGCCACAAG
ATAGCTTACTCATTGTGCGACGGCCCTGCCCGCCTCCTACTTGCTGTGTT
GTTTAAATTGCGGCCGGTTTCCCCCCCACACACTTTAGTTTCGAAATGTA
GGATATGGATTGCTTTTGTGTTCGATCAGCACGACTTCTCTGTCGTTCGT
GGGATGGACGCGGTACCTTATTGGTTAACCCGAAGAACGTGTTTGTGACC
CGCTGGTATTATGTGTATTGTTTGATCGTGTGCGCGGCTGCTACAACACG
TTGACCGACCGCCACACAACAGGCAGGCGTTCGCCACACAAGAGGCAGGC
GTTCGATGTTGGCGTTGTTGGATAGTCAGGAGGACGTTCACACGGGCGGC
AATACTGCTGTACATGGAAATTGGCGACGGAGCACGTCATATCATTAGAC
GCGAGGCCCACCTAGATACCTTAGACACAAGGCCCATCTAGATGTGTAGA
CTATGTGCGTGTGCCGTTTTTTTCAGTGATGTCGATAACCGGGCTCGAGC
AGGGTACTGACCGGAAATAACCGGAAATGAGCCTTCGGCGGTACATACCG
GTTATAACCGCTCATAGCGGGGACGAAAACGGCCCATCCCCGGGGTGTTA
TTTAACGTATACGTCCGATATTTTGTTCGTTTGGAAGCAGCTCGCTGTAT
GCTGTTCAAGGTGCACTTCTGTGCGCGTTGCTGCCACTGCTGCCGCAGTC
GTGTGTATCGTTTCAGCTTCCTACCTTGAACCTTTGAACCACGTTACAAT
GCAGGTGCAATATTGGAATGTTGTCATGAATACATTTTTTTTTTCTCGGC
CATGAGAATATAGGAAAGCCCCGAGAAAAACGAAAAACAAAAAAGCTTGT
CTTCTCATCTGCTAGTGCGTAATGTGCCTCCTATAGATCTCACAACAACG
CGCAGCAAGTGGGAAAAAAAAAAGACAAAAGGCGTTCAGGTTCAAATACC
CCCCCCCAGTGAACGAAAGTCAAGGAGATGCTAGAGAGTAGGGAGGAGAC
AACCCTTCGGAAGAAGGTACGAAGCGAAGACCACTTGGAGATATACGGGA
AGTTGAAAGAAGGGATAGGGATGAAGAAGTACTTGGACGGCCCCATGGAC
TATGCGAAAAAGCTGAAATTGCAGTTTCGAGTAGGCGATCTGGACTTGCC
AGAACGGAGGAAGAGGTATACCAGCCGTAGGAGAGAGGAAGAGGAGGATA
GACACACATGTCCATGTGGCAAATCGGAGGAGAGTAGACCCCACATAGTT
GGGGAGTGTGAGTTGTACAGGAAGGAAAGCGAGGATCTCGAGGAGGAAAT
GAGACAGAGAGGGTGTGACATGGACAAGTTTGGTAAATTAGACAACAGCG
AAAAAACGATCGCGATAATTGGGGATAGATGGTGGGCACAAGAGGCCCTA
GAGGACGGGGATAAGATGTGCAAGAAATTTTTATGGAGTTTGTGGCAGAA
ACGTAAAGAGCTCCCAAATGTTGGTGGTGTCTCTAGTAGGTGTAGGAACG
GTGCTCCGTCTCGAAAGG
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protein sequence of Ec-28_000310.1

>Ec-28_000310.1 ID=Ec-28_000310.1|Name=Ec-28_000310.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=473bp
MLQVRHVVRNGKIILVYVLASSRRRCLPTFAARAHGLHNNRPDHSSASGS
VESGALNRTTSPSDDKLAKETHRRTDSPAESPTSGTSGTSSTGSNRNSNR
NSNSNSNRKLVAADKKSVRRSVKELIAQFTKGTKVLWLDFKGSRQTKAKK
RAGQVLTFQENRQLRQVGRDLAKALPVLTVFSLPIAGYLAPALGYIFPKT
MLPPQFWTSPQRLRFMLEDAKKQEVSSFPKLLQHLAMMASSPRPNSSPGQ
LQFSAKWFWKEGSLDRLPRQHLLQLIKSCNTVPPFKRATARFAPKSSLVS
WLTTEATSISNDDLALRKQFYDEAKARISGQEEGSKLNLTAPEVLLLCWE
RGLLRSQHWPDAHLRWAADGATSGSAGTAVDEPIPEAEAKAMLGSLRAYL
SLYDSPSATRNLRGRSLDDSVGADYDVLSSCGTGAALPPSMVLHAPALLR
ITHSANGSASPLCHLRVESATR*
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mRNA from alignment at chr_28:368794..374645-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-28_000310.1 ID=Ec-28_000310.1|Name=Ec-28_000310.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=5852bp|location=Sequence derived from alignment at chr_28:368794..374645- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
GTGCGCAGCGCACGCAACGTGCGTACAACGTGCAAAGCGCGTGTAGGCGT
CGAAACCACAAGCTGCTGATACCCCGATATACCTTGCATAAGCTCCTTGG
TTGTGTGGGGGTCTGCGGCGGCAGTGCCAGCTGAAATGCTTCAAGTGAGA
CACGTCGTCCGCAACGGGAAAATCATCCTCGTGTACGTTCTCGCCAGCAG
CAGACGACGATGCCTGCCGACATTTGCCGCCCGGGCTCACGGCTTGCACA
ACAACCGGCCAGACCACAGCAGTGCTAGTGGTTCAGTAGAGTCGGGCGCT
TTGAACAGAACCACGAGCCCTAGCGACGACAAGCTGGCCAAGGAAACGCA
CAGACGGACAGATTCTCCGGCCGAGAGCCCTACGAGCGGCACCAGCGGCA
CCAGCAGCACTGGCAGCAACCGCAACAGCAACCGCAACAGCAACAGCAAT
AGCAACAGGAAGTTGGTCGCAGCGGACAAGAAGAGCGTGAGGCGAAGTGT
CAAGGAGCTCATCGCTCAGTTCACGAAAGGAACCAAGGTGCTTTGGCTTG
ACTTCAAGGGGTCGAGGCAGACTAAGGCAAAGAAAAGAGCCGGCCAGGTA
CTCACTTTTCAGGAGAACCGGCAGCTACGTCAGGTGAGGCAGACCTACAA
TACTGCTGTACTTCTGTGCACCGACACACGGCCGTTGGGTGTGATGAACA
CGAACGGAAGCAGGCCAGTGGCATGCCTCAACGCAAGAGCCCCCCCCCCC
CCTCTCTATAGGGGTGCGACTCGAACCAATCCGTTTGTGACAGCAGTGCA
TATGCATATGTGCGCCGCCCTGTCGATTCTCGGGACTGTACGGGTGATGG
GCGCCTCTGAGCTTCTGAGGGCTCTCCAACCACCCCCAAATGGTAGGTTC
AAAGTTAGGCACGTTCATGGCTCTCGGCTTTCATCACCGGACGGGAGAGA
AAGACGCAACGGAACCTGTTCCTCCTGGAGAGTGCGTTCTTCTGTTATGG
AACCGTACGTTGTGTGTGGTTTATTCCGTGCTTTCAGTCTCATACAGTAA
CTTCACAGGGAGAGCAAGGCGACACGTGGTGCAATGCACAACACAGCAGT
GCGAGTGTAGGGCTCCGAAACCCTTGGTGCTTTTGAAACGTAGCACATAC
ACCGCACGGAAGGTACTCAGTTGCCACGGTATTGCCTTAGTTCCCTATCC
GCGTGGGGAGGAGAATATCCTAGTCACGTACCTGTGTGTGCTGCAAGTTT
AGCGTTCGCACCCTCTTCGGCTGAAGTCTCACGCTCCAGCTGACGTCACA
GGGATTGACAGGTGCTGCTGCTGGATGCATTGTAAACCGTAGTGCGTTGG
TGTTTCTCCCCCCTCGTGACTTTGCCATATATACCTTTCTACACAGTTCT
CCAGCCCTCCAGACGAATAGACACGAACATTAACGAGAGTGCAACGTCTG
CGCCCCCCACTGCAGCACAAGCACCTTGTACCGCTGATGTTGTGTTTGAT
AAGTCTACTAGCCGTGCTTGTCACGTGCCCACTTTTTGTATAACCACCGG
TGTTGGTCTCGTTTGCAACAGGTCGGGCGAGACCTTGCGAAGGCCTTGCC
TGTCCTGACTGTGTTCTCGTTACCCATCGCGGGCTACCTGGCGCCTGCAC
TCGGATACATCTTCCCCAAGACGATGCTCCCTCCGCAGTTTTGGACCTCG
CCGCAGAGACTTCGGTTCATGCTTGAGGTATGTATGTAGGGGGGGGAGAG
GCACCTTGCTAACGCGCAACACGGCAGGGTCCCAGAGCTGCAAAAGTTTG
CTGCATAACCTGCTCTGCAGCGTCAGGTGGTACACGACAACAATTTTGTT
GCTGCGACGTGTAAAGTTCACGTGGAGACGAAGTGGTGCCAAGTCCATAA
CCGGGTGCTGCAGGATGTTGAAGGCGTATTTCTGCTACTCCGTACTTCCG
CCTGGTGTTGTCCTAAAAAAAGCAGTCCCTGGTGCTTGCATTTGCCCAGG
AAAATCCTTCGGAGACATGAATTGGCAGAACCAAGATAAAGGGATATCTG
GGAAGGACAATGATAGACACGAGAGCGCTTGTCCTGATGATATCAGCAAC
GTCGATGGTCGCCACAACACAACTTGTTCTCAATGCGCTTGTTGTCGAAA
GGGTGCATCGACGGAAGCCCGTTTTCATAGCCCACGCCGGGACCGCCAAG
CCTATCGCAGCACAGCCACCCTCCTCTCAGAACGCCTGCTACTCTCTTGC
TGTCGCTTTTCGTGGGGCGCTTCCCGCAGGATGCCAAGAAGCAGGAAGTC
TCATCTTTCCCAAAGCTTTTGCAGCACCTGGCAATGATGGCGTCGTCTCC
TCGGCCCAACAGCAGCCCAGGACAGCTGCAGTTTTCGGCCAAGTGAGTTG
GTTGCTGTGACCGATCGCACCCCGTACACAACGACAGTGATCGCAGCAGA
GAGTTGCGCGGGCCGTGGTGTGATGTATGCTGCGGCTTGGGTTGTCCGTT
GCACGTAGCAGGACGGTCGTTGTCACCAATGATGCAGGAACGAGGAGATT
ATCCCATTGTATTTGTTGCGCCTCTCTTTGGGGTTTCAGTCATCGGAGGG
GTGTTGGGTGGCTGTGCATGACGTGGGCTACAGTATTCTCATGGCGATGA
TGGCACCATGGGCAGGGAGTGACAATATAAGCGAACAAGCCGCCCCTTGG
GGCTGGGCAGCTTTGTCGTCCTGCGCATGCGCGCGACCTCCATCTTCCTT
CTGCATGCATCACGAGGAATCTGTCCTTGGCGAAGGCTACCAAGGCCTTC
TCTGCTCCGGCTTTAATTACCCCCCGAGTACCTCACCCACCTGTGTGAAC
GTGTTTTCCTCCTTCAAGGTGGTTCTGGAAGGAAGGCAGCTTGGACAGGT
TGCCACGGCAGCACCTTTTGCAACTAATAAAGTCTTGCAACACCGTGCCG
CCATTCAAAAGGGCAACCGCCAGATTTGCTCCCAAGTCATCGCTGGTGTC
CTGGCTTACCACTGAAGCCACATCGATCAGGTACCAGGATGTTGCTGTTG
AACTTCGTTACCCGTACACCTACCACCGGTGGAACAGTCGGCGGCCTTGC
TATTTTTAGTTTCCAAAGAAACTCGCGAAATCGGCGTTTATGGGCCCGTT
GGTCTTGAAACCACGCGCATGTTGTGTGTTGGTTGTGTGGCCCCTCTGGA
ACCGCTATCGCAGGGCTCCCAAGAATGCTATGGGTGTCCCGCACAAGAGA
GAGGCCAACCCCAGTTGGCAAGCCTCGTCACGTTGAAGGAGCAGATGCTA
GGTGTGCGTTCGTCGTAGCCAAACAAGAAGAAATGACCCTAAGGGCGAAT
GAGGGGTCGATGGGCTTGTCGCCAGGTGCGCTTGACCCAGGACACCGTCC
GATAATCGCTGTAGCCTGGGCCCTGAACGGTGACTCCCCTTGTTGCTCGA
CTTCTTGTCGTTGTTGCTGCTGCTCACGATGTCCTCGCGTCGCAGCAACG
ACGATCTGGCTCTCAGAAAGCAGTTTTACGACGAAGCAAAAGCACGCATT
TCCGGGCAGGAGGAAGGGTCGAAACTGAATCTGACGGCTCCGGAAGTTCT
GCTTCTATGCTGGGAGAGGGGGCTGTTGAGATCGCAGCACTGGCCGGACG
CCCACCTGCGATGGGCAGCGGATGGTGCTACCAGTGGCAGCGCGGGTACT
GCTGTCGACGAACCGATTCCGGAGGCAGAGGCGAAAGCGATGCTCGGAAG
GTGAGGCGATCGCTTGTCTTGCGTAGTCCATCGTGTTCGAGATTCAGGCG
CGTTTCAAGCACGAAAAGGGCGAGTGTACTTCCGACGTGGAAGTTCGTAG
GTTTCAACGTATTTGGTCGTGGAACTTCAGTGTAGGTTTCATGCCCGCGG
GTTGCGTTCGTTTCGTGCAAAGCATGTTGCTACTGCTGGGAGCGTACAAA
GTGATGCCCTGCTCCGTGCAAATATTCTCGTCACTATTCATTGACGGATC
CCTCTTACCCCCCCCCCCCGTCCCCGTCCTCCAAATGCGCGCCGCCTTCA
TGTTCGGCCGGACTGGGGTTGGATTTGATCGGGTTCGAATAAACGACTCG
CAGCTTGAGAGCCTACCTGTCCCTCTACGATTCGCCATCGGCGACTCGGA
ACCTGCGGGGCCGCTCCCTGGATGATTCTGTCGGTGCCGATTACGATGTT
TTGTCTTCATGCGGTACTGGCGCTGCCCTCCCGCCATCGATGGTGTTGCA
CGCTCCAGCGTTGCTTCGCATCACGCATTCCGCCAACGGCTCTGCTTCCC
CCCTCTGCCATCTGCGAGTCGAGAGCGCCACAAGATAGCTTACTCATTGT
GCGACGGCCCTGCCCGCCTCCTACTTGCTGTGTTGTTTAAATTGCGGCCG
GTTTCCCCCCCACACACTTTAGTTTCGAAATGTAGGATATGGATTGCTTT
TGTGTTCGATCAGCACGACTTCTCTGTCGTTCGTGGGATGGACGCGGTAC
CTTATTGGTTAACCCGAAGAACGTGTTTGTGACCCGCTGGTATTATGTGT
ATTGTTTGATCGTGTGCGCGGCTGCTACAACACGTTGACCGACCGCCACA
CAACAGGCAGGCGTTCGCCACACAAGAGGCAGGCGTTCGATGTTGGCGTT
GTTGGATAGTCAGGAGGACGTTCACACGGGCGGCAATACTGCTGTACATG
GAAATTGGCGACGGAGCACGTCATATCATTAGACGCGAGGCCCACCTAGA
TACCTTAGACACAAGGCCCATCTAGATGTGTAGACTATGTGCGTGTGCCG
TTTTTTTCAGTGATGTCGATAACCGGGCTCGAGCAGGGTACTGACCGGAA
ATAACCGGAAATGAGCCTTCGGCGGTACATACCGGTTATAACCGCTCATA
GCGGGGACGAAAACGGCCCATCCCCGGGGTGTTATTTAACGTATACGTCC
GATATTTTGTTCGTTTGGAAGCAGCTCGCTGTATGCTGTTCAAGGTGCAC
TTCTGTGCGCGTTGCTGCCACTGCTGCCGCAGTCGTGTGTATCGTTTCAG
CTTCCTACCTTGAACCTTTGAACCACGTTACAATGCAGGTGCAATATTGG
AATGTTGTCATGAATACATTTTTTTTTTCTCGGCCATGAGAATATAGGAA
AGCCCCGAGAAAAACGAAAAACAAAAAAGCTTGTCTTCTCATCTGCTAGT
GCGTAATGTGCCTCCTATAGATCTCACAACAACGCGCAGCAAGTGGGAAA
AAAAAAAGACAAAAGGCGTTCAGGTTCAAATACCCCCCCCCAGTGAACGA
AAGTCAAGGAGATGCTAGAGAGTAGGGAGGAGACAACCCTTCGGAAGAAG
GTACGAAGCGAAGACCACTTGGAGATATACGGGAAGTTGAAAGAAGGGAT
AGGGATGAAGAAGTACTTGGACGGCCCCATGGACTATGCGAAAAAGCTGA
AATTGCAGTTTCGAGTAGGCGATCTGGACTTGCCAGAACGGAGGAAGAGG
TATACCAGCCGTAGGAGAGAGGAAGAGGAGGATAGACACACATGTCCATG
TGGCAAATCGGAGGAGAGTAGACCCCACATAGTTGGGGAGTGTGAGTTGT
ACAGGAAGGAAAGCGAGGATCTCGAGGAGGAAATGAGACAGAGAGGGTGT
GACATGGACAAGTTTGGTAAATTAGACAACAGCGAAAAAACGATCGCGAT
AATTGGGGATAGATGGTGGGCACAAGAGGCCCTAGAGGACGGGGATAAGA
TGTGCAAGAAATTTTTATGGAGTTTGTGGCAGAAACGTAAAGAGCTCCCA
AATGTTGGTGGTGTCTCTAGTAGGTGTAGGAACGGTGCTCCGTCTCGAAA
GG
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Coding sequence (CDS) from alignment at chr_28:368794..374645-

>Ec-28_000310.1 ID=Ec-28_000310.1|Name=Ec-28_000310.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1419bp|location=Sequence derived from alignment at chr_28:368794..374645- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCTTCAAGTGAGACACGTCGTCCGCAACGGGAAAATCATCCTCGTGTA
CGTTCTCGCCAGCAGCAGACGACGATGCCTGCCGACATTTGCCGCCCGGG
CTCACGGCTTGCACAACAACCGGCCAGACCACAGCAGTGCTAGTGGTTCA
GTAGAGTCGGGCGCTTTGAACAGAACCACGAGCCCTAGCGACGACAAGCT
GGCCAAGGAAACGCACAGACGGACAGATTCTCCGGCCGAGAGCCCTACGA
GCGGCACCAGCGGCACCAGCAGCACTGGCAGCAACCGCAACAGCAACCGC
AACAGCAACAGCAATAGCAACAGGAAGTTGGTCGCAGCGGACAAGAAGAG
CGTGAGGCGAAGTGTCAAGGAGCTCATCGCTCAGTTCACGAAAGGAACCA
AGGTGCTTTGGCTTGACTTCAAGGGGTCGAGGCAGACTAAGGCAAAGAAA
AGAGCCGGCCAGGTACTCACTTTTCAGGAGAACCGGCAGCTACGTCAGGT
CGGGCGAGACCTTGCGAAGGCCTTGCCTGTCCTGACTGTGTTCTCGTTAC
CCATCGCGGGCTACCTGGCGCCTGCACTCGGATACATCTTCCCCAAGACG
ATGCTCCCTCCGCAGTTTTGGACCTCGCCGCAGAGACTTCGGTTCATGCT
TGAGGATGCCAAGAAGCAGGAAGTCTCATCTTTCCCAAAGCTTTTGCAGC
ACCTGGCAATGATGGCGTCGTCTCCTCGGCCCAACAGCAGCCCAGGACAG
CTGCAGTTTTCGGCCAAGTGGTTCTGGAAGGAAGGCAGCTTGGACAGGTT
GCCACGGCAGCACCTTTTGCAACTAATAAAGTCTTGCAACACCGTGCCGC
CATTCAAAAGGGCAACCGCCAGATTTGCTCCCAAGTCATCGCTGGTGTCC
TGGCTTACCACTGAAGCCACATCGATCAGCAACGACGATCTGGCTCTCAG
AAAGCAGTTTTACGACGAAGCAAAAGCACGCATTTCCGGGCAGGAGGAAG
GGTCGAAACTGAATCTGACGGCTCCGGAAGTTCTGCTTCTATGCTGGGAG
AGGGGGCTGTTGAGATCGCAGCACTGGCCGGACGCCCACCTGCGATGGGC
AGCGGATGGTGCTACCAGTGGCAGCGCGGGTACTGCTGTCGACGAACCGA
TTCCGGAGGCAGAGGCGAAAGCGATGCTCGGAAGCTTGAGAGCCTACCTG
TCCCTCTACGATTCGCCATCGGCGACTCGGAACCTGCGGGGCCGCTCCCT
GGATGATTCTGTCGGTGCCGATTACGATGTTTTGTCTTCATGCGGTACTG
GCGCTGCCCTCCCGCCATCGATGGTGTTGCACGCTCCAGCGTTGCTTCGC
ATCACGCATTCCGCCAACGGCTCTGCTTCCCCCCTCTGCCATCTGCGAGT
CGAGAGCGCCACAAGATAG
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Synonyms
The feature 'Ec-28_000310.1' has the following synonyms
Synonym
Esi0120_0059
Esi_0120_0059