Ec-28_000300.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-28_000300.1
Unique Name	Ec-28_000300.1
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	516

Homology

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BLAST of Ec-28_000300.1 vs. uniprot
Match: D7FIH5_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH5_ECTSI)

HSP 1 Score: 1024 bits (2647), Expect = 0.000e+0
Identity = 515/515 (100.00%), Postives = 515/515 (100.00%), Query Frame = 1

Query:    1 MSLPGDEIWRFQAGSSYDDDAVYGVSTDAEGSFFLAGKTTGSLDGITLNAGGEDMAVGKLDSDGVLLWSWQEGTTGEDTMSDAAATDDGGVVVGGYSNGTLSGVVSEGLGDFIAIKFDSDGTEEWRWQEGTEKDEVISTCSKTADGNVVLTGLTQGDWEETNTGLWALVAVKLDVSDGSVIWRYQAGVPSYSVVSRGAASRADGSIVIGGTTDGDWDGELTGYADFFSVALDEDGSELWRFQDGSLFSISSAWGVAALSDGSVVLAGTTDGDYAGTNAGAQDFAVVKLTEEGVLDWTWQDGTLYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTTSYDNFIGVDVGPDGAALLAGFSQGAWEDPTADSYADFAGVLIETGAVPATPAPADDIVITPSTPSPVIGTSGGTSEGSCGDGESFLITSDALPAVEGCFQNTQQLFSNGDEYEEYSVSGTSDWDQVSMFGGSSEFADDDGDEAVLPGVFHPG 1545
            MSLPGDEIWRFQAGSSYDDDAVYGVSTDAEGSFFLAGKTTGSLDGITLNAGGEDMAVGKLDSDGVLLWSWQEGTTGEDTMSDAAATDDGGVVVGGYSNGTLSGVVSEGLGDFIAIKFDSDGTEEWRWQEGTEKDEVISTCSKTADGNVVLTGLTQGDWEETNTGLWALVAVKLDVSDGSVIWRYQAGVPSYSVVSRGAASRADGSIVIGGTTDGDWDGELTGYADFFSVALDEDGSELWRFQDGSLFSISSAWGVAALSDGSVVLAGTTDGDYAGTNAGAQDFAVVKLTEEGVLDWTWQDGTLYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTTSYDNFIGVDVGPDGAALLAGFSQGAWEDPTADSYADFAGVLIETGAVPATPAPADDIVITPSTPSPVIGTSGGTSEGSCGDGESFLITSDALPAVEGCFQNTQQLFSNGDEYEEYSVSGTSDWDQVSMFGGSSEFADDDGDEAVLPGVFHPG
Sbjct:    1 MSLPGDEIWRFQAGSSYDDDAVYGVSTDAEGSFFLAGKTTGSLDGITLNAGGEDMAVGKLDSDGVLLWSWQEGTTGEDTMSDAAATDDGGVVVGGYSNGTLSGVVSEGLGDFIAIKFDSDGTEEWRWQEGTEKDEVISTCSKTADGNVVLTGLTQGDWEETNTGLWALVAVKLDVSDGSVIWRYQAGVPSYSVVSRGAASRADGSIVIGGTTDGDWDGELTGYADFFSVALDEDGSELWRFQDGSLFSISSAWGVAALSDGSVVLAGTTDGDYAGTNAGAQDFAVVKLTEEGVLDWTWQDGTLYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTTSYDNFIGVDVGPDGAALLAGFSQGAWEDPTADSYADFAGVLIETGAVPATPAPADDIVITPSTPSPVIGTSGGTSEGSCGDGESFLITSDALPAVEGCFQNTQQLFSNGDEYEEYSVSGTSDWDQVSMFGGSSEFADDDGDEAVLPGVFHPG 515

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BLAST of Ec-28_000300.1 vs. uniprot
Match: D7FIH4_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH4_ECTSI)

HSP 1 Score: 782 bits (2020), Expect = 3.000e-282
Identity = 391/453 (86.31%), Postives = 415/453 (91.61%), Query Frame = 1

Query:  163 MAVGKLDSDGVLLWSWQEGTTGEDTMSDAAATDDGGVVVGGYSNGTLSGVVSEGLGDFIAIKFDSDGTEEWRWQEGTEKDEVISTCSKTADGNVVLTGLTQGDWEETNTGLWALVAVKLDVSDGSVIWRYQAGVPSYSVVSRGAASRADGSIVIGGTTDGDWDGELTGYADFFSVALDEDGSELWRFQDGSLFSISSAWGVAALSDGSVVLAGTTDGDYAGTNAGAQDFAVVKLTEEGVLDWTWQDGTLYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTTSYDNFIGVDVGPDGAALLAGFSQGAWEDPTADSYADFAGVLIETGAVPATPAPADDIVITPSTPSPVIGTSGGTSEGSCGDGESFLITSDALPAVEGCFQNTQQLFSNGDEYEEYSVSGTSDWDQVSMFGGSSEFADDDGDEAV 1521
            MA GKLDSDG +LWSWQEGTT ED +SDAAATDDGGVV  G+ NGTL+GV SEGLGDFIAIKFDSDGTEEWRWQ+GTE DE I+TCSKTADGNVVLTG T GDW ETNTGLWALVAVKLDV+DGSVIW+YQAGVPS SVVSRG+ASRADGSIVIGG TDGDWDGELTG+ DFF+VALDEDGSELWRFQDGSL S SSAWGVAALSDGSVVLAGTTDG+YAGTNAGAQDFAVVKLTEEGVLDWTWQDGT YDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTT++DNFIGVDVGPDGAALLAGFS G WEDPTAD YADFAGVLIETGAVPATPAPADDIVITPSTP PV GTSG TSEGSCGDGESFLITSD LP V+GC+Q T   F +G +YEEY+VSG ++W+ ++MFG SS FADDDGDEA 
Sbjct:    1 MAAGKLDSDGAVLWSWQEGTTDEDALSDAAATDDGGVVFAGFFNGTLNGVASEGLGDFIAIKFDSDGTEEWRWQDGTEMDEGITTCSKTADGNVVLTGSTLGDWVETNTGLWALVAVKLDVTDGSVIWQYQAGVPSQSVVSRGSASRADGSIVIGGVTDGDWDGELTGFTDFFTVALDEDGSELWRFQDGSLLSSSSAWGVAALSDGSVVLAGTTDGNYAGTNAGAQDFAVVKLTEEGVLDWTWQDGTPYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTTNHDNFIGVDVGPDGAALLAGFSAGTWEDPTADFYADFAGVLIETGAVPATPAPADDIVITPSTPFPVTGTSGDTSEGSCGDGESFLITSDVLPVVQGCYQQTTLSFDDGGQYEEYTVSGLTEWEHITMFGSSSAFADDDGDEAT 453

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BLAST of Ec-28_000300.1 vs. uniprot
Match: A0A6H5L7T2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7T2_9PHAE)

HSP 1 Score: 790 bits (2041), Expect = 5.420e-282
Identity = 400/498 (80.32%), Postives = 431/498 (86.55%), Query Frame = 1

Query:   34 QAGSSYDDDAVYGVSTDAEGSFFLAGKTTGSLDGITLNAGGEDMAVGKLDSDGVLLWSWQEGTTGEDTMSDAAATDDGGVVVGGYSNGTLSGVVSEGLGDFIAIKFDSDGTEEWRWQEGTEKDEVISTCSKTADGNVVLTGLTQGDWEETNTGLWALVAVKLDVSDGSVIWRYQAGVPSYSVVSRGAASRADGSIVIGGTTDGDWDGELTGYADFFSVALDEDGSELWRFQDGSLFSISSAWGVAALSDGSVVLAGTTDGDYAGTNAGAQDFAVVKLTEEGVLDWTWQDGTLYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTTSYDNFIGVDVGPDGAALLAGFSQGAWEDPTADSYADFAGVLIETGAVPATPAPADDIVITPSTPSPVIGTSGGTSEGSCGDGESFLITSDALPAVEGCFQNTQQLFSNGDEYEEYSVSGTSDWDQVSMFGGSSEFADDDGDEAVLP 1527
            +AG+SY  D VYGVS DAEGSFFLAG T GSLDGIT NAGG DMA GKLDSDG +LW WQEG+T +DT++DAAATDDGGVV  G+ NGTL+GV SEGLGDF AIKFDSDGTEEWRWQ+GTEKDEVI TCSKTADGNVVLTG+TQGDW ETNTGLWALVAVKLDV+DGSVIW+YQAGVPSYSVVSRGAASRADGSIVIGG+TDGDWDGELTGYADFFSVAL+EDGSELWRFQDGS FSISSAWGVAALSDGSVVLAG TDGDYA TNAG QDFA+VKLTEEGVLDWTWQDGT YD+ FEG ATGIDGTSMVF GYT+GTWAA QAEDE+D DAVGMSMDGDGTLLWTYQAGTT ++ F+GVDV PDGAALLAG+S G WED T D YADFAGVLI TGAVPATPAPA   VI         GTSGGTSEGSCGDGESF ITSD LP VEGC+Q T   F  GDEYEEY+VSG S W+ +++ G SS FADDDGD  ++P
Sbjct:   15 KAGTSYSHDYVYGVSADAEGSFFLAGTTEGSLDGITFNAGGTDMAAGKLDSDGAVLWYWQEGSTEDDTLADAAATDDGGVVFAGFYNGTLNGVPSEGLGDFFAIKFDSDGTEEWRWQDGTEKDEVILTCSKTADGNVVLTGMTQGDWVETNTGLWALVAVKLDVTDGSVIWQYQAGVPSYSVVSRGAASRADGSIVIGGSTDGDWDGELTGYADFFSVALNEDGSELWRFQDGSEFSISSAWGVAALSDGSVVLAGVTDGDYAETNAGEQDFALVKLTEEGVLDWTWQDGTPYDDGFEGAATGIDGTSMVFVGYTYGTWAAEQAEDEEDSDAVGMSMDGDGTLLWTYQAGTTGFETFVGVDVSPDGAALLAGYSTGTWEDSTTDFYADFAGVLIATGAVPATPAPAT--VIAXXXXXXXTGTSGGTSEGSCGDGESFRITSDVLPVVEGCYQQTDWSFDEGDEYEEYTVSGMSGWEHIAILGMSSAFADDDGD-VIMP 509

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BLAST of Ec-28_000300.1 vs. uniprot
Match: D7G7A3_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7A3_ECTSI)

HSP 1 Score: 218 bits (554), Expect = 6.650e-58
Identity = 146/418 (34.93%), Postives = 213/418 (50.96%), Query Frame = 1

Query:   28 RFQAGSSYDDDAVYGVSTDAEGSFFLAGKTTGSLDGITLNAGGEDMAVGKLDSDGVLLWSWQEGTTGEDTMSDAAATDDGGVVVGGYSNGTLSGVVSEGLGDFIAIKFDSDGTEEWRWQEGTEKDEV---ISTCSKTADGNVVLTGLTQGDWEETNTGLWALVAVKLDVSDGSVIWRYQAGVPSYSVVSRGAASRADGSIVIGGTTDGDWDGELTGYADFFSVALDEDGSELWRFQDGSLFSISSAWGVAAL--SDGSVVLAGTTDGDYAGTNAGAQDFAVVKLT-EEGVLDWTWQDGTLYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTTSYDNFIGVDVGPDGA----ALLAGFSQGAWEDPTADSYADFAGVLIETGAVPATPAPA 1251
            R   G    ++ + GV+    G+    G+T G      ++ GG D    KL  DGV  W WQ+GT+ ED ++DA    DG VV+ G + G  SG  + GLGD  A+K D  G   W+WQ GT  DE+   I++ +  +   VVL G T+G W  +N G +   A KLD +DG+ +W +Q G  +    ++  A   DGS+ + G T+GDW+    G  DF    LD +G+  WR+QDG+       +G+  +   DG V LAG + G + G N G++ F VVK+   +G   W WQ+GT   +   G A  +D  S+V  GY+ G WA   A   D   A    +D +G+ +W +QAGT S D      V    A    A+LAG ++G+W+    +   DF  V ++ G V   P PA
Sbjct:  184 RLAVGGGPANENMKGVAAGDNGTIIAVGRTDGDFFPF-VSLGGFDFLAVKLGPDGVYSWHWQDGTSDEDNLNDAVVNSDGSVVLAGSTEGDWSGT-NAGLGDLAAVKLDESGAVLWKWQSGTSDDELLVGITSANSASGSEVVLVGRTEGSWAASNVGGYDFCAAKLD-ADGNELWSWQDGTDADDT-TKAVAVDGDGSVFLAGYTEGDWNQPNEGETDFAVTKLDANGTLAWRWQDGTE---DEEFGLMVVVGRDGGVYLAGYSTGAFGGINKGSEGFVVVKIDGRDGSELWRWQNGTSAADKLFGAAI-LDDDSVVVTGYSEGDWAETNAGGSDFCAA---RLDANGSEMWRWQAGTDSSDWITAATVSQVVAGAPRAILAGTTEGSWDGDN-NGEEDFVLVSLDVGEVEPIPTPA 589

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BLAST of Ec-28_000300.1 vs. uniprot
Match: D7FXY5_ECTSI (von Willebrand factor type D domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY5_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 8.290e-57
Identity = 167/472 (35.38%), Postives = 231/472 (48.94%), Query Frame = 1

Query:   22 IWRFQAGSSYDDDAVYGVST-DAEGSFFLAGKTTGSLDGITLNAGGEDMAVGKLDSDGVLLWSWQEGTTGEDTMSDAAAT--------------------DDGGVVVGGYSNGTLSGVVSEGLGDFIAIKFDS-DGTEEWRWQEGTEKDEVISTCSKTADGN-VVLTGLTQGDWEETNTGLWA-LVAVKLDVSDGSVIWRYQAGVPSYSVVSRGAASRADGSIVIGGTTDGDWDGELTGYADFFSVALDEDGSELWRFQDGSLFS-ISSAWGVAALSDGSVVLAGTTDGDYAGT--NAGAQDFAVVKLTEEGVLDWTWQDGTLYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTTSYDNFIGV-DVGPDGAALLAGFSQGAWEDP----------TADSYADFAGVLIETGA--VPATPAPADDIVITPSTPSPVIG-TSGGTS 1314
            +W +Q G+S  D+ +YGV+    + SF LAG+T G  D    N G  D    K   DG   W  Q GT   DT  DAAA                     +   +++ G++ G   G  S G  DF+A+   S DG++ W WQ+GTE+D+V+    +   G+ VVL G T GDW + N G      AVKL+  DGS IWR+Q G      +   AA+  D ++V+ G T+G   G+  G  D   V LD DG  LWR+Q G+  S + SA  VA   DGS+V+AG T G + G+  NAG  D  VVKL ++G   W WQ+GT   +     A   DG   V AGY+ G WAAA A      D + + +  +G +LW +Q G    D        G  G+ +LAG S+  W+D           T  +  DF  + ++     V AT AP     + P++P  V G TSGG+S
Sbjct:    8 LWSWQDGTSGTDN-LYGVAAVGGDDSFVLAGRTQG--DWAETNEGDFDFMAVKFAQDGTEQWRLQAGTPETDTFHDAAAVTSSPSTVANMAATGTSAAGDESTAIILAGFTKGGWDGAASAGGSDFVAVSVASGDGSQLWSWQDGTEEDDVLMGVVERGGGSAVVLAGRTGGDWADANAGEGTDFAAVKLEAGDGSEIWRFQDGSSGDDTLKSVAAAEDD-TVVLAGYTEGSLGGDNAGETDCAVVKLDADGGVLWRWQGGTAESDVCSAAAVAE--DGSIVVAGYTVGSWGGSEANAGEDDLVVVKLDKDGNELWHWQEGTPLKDRLFAAALCEDG-GFVLAGYSEGDWAAADA-GAGGSDLIAVKLSPEGEVLWRWQDGNAGSDWVTAAASTGSGGSIVLAGTSEATWQDSATTTTTGDDTTGLTTEDFVAISLDVAEADVDATRAPVP--ALPPTSPDNVAGLTSGGSS 469

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BLAST of Ec-28_000300.1 vs. uniprot
Match: A0A6H5JF09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF09_9PHAE)

HSP 1 Score: 190 bits (482), Expect = 9.880e-50
Identity = 140/379 (36.94%), Postives = 188/379 (49.60%), Query Frame = 1

Query:  163 MAVGKLDSDGVLLWSWQEGTTGEDTMSDAAAT--------------------DDGGVVVGGYSNGTLSGVVSEGLGDFIAIKFDS-DGTEEWRWQEGTEKDEVISTCSKTADGN-VVLTGLTQGDWEETNTGLWA-LVAVKLDVSDGSVIWRYQAGVPSYSVVSRGAASRADGSIVIGGTTDGDWDGELTGYADFFSVALDEDGSELWRFQDGSLFS-ISSAWGVAALSDGSVVLAGTTDGDYAGT--NAGAQDFAVVKLTEEGVLDWTWQDGTLYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTTSYDNFIGV-DVGPDGAALLAGFSQGAWEDPTADSYADFAGVLIE 1218
            MAV K   DG   W  Q GT   DT  DAAA                     +   +V+ G++ G  +G  S G  DF+A+   S DG+  W WQ+GTE+D+V+    +   G+ VVL G T GDW + N G      AVKL+  DGS IWR+Q G      +   AA+  D ++V+ G TDG   G   G  D   V LD DG  LWR+Q G+  S + SA  VA   DGS+VLAG T G + G+  NAG +D  VVKL ++G   W WQ+GT   +     A   DG   V AGY+ G WAAA A      D + + +  +G +LW +Q G    D       +G  G+ +LAG S+  W+D    +  D  G+  E
Sbjct:    1 MAV-KFAQDGTEQWRLQAGTPETDTFHDAAAASGSPSTVATMAATGTSAAGDESTAIVLAGFTKGGWNGAASAGGSDFVAVSLASGDGSRLWSWQDGTEEDDVLVGLVERGGGSAVVLAGRTGGDWADANAGEGTDFAAVKLEAGDGSEIWRFQDGSSGDDTLKSVAAAEDD-TVVLAGYTDGSLGGVNAGETDCTVVKLDADGGVLWRWQGGTAESDVCSATVVAE--DGSIVLAGYTVGSWDGSEANAGEEDLVVVKLDKDGNELWHWQEGTSLKDRLFAAALCEDG-GFVLAGYSEGDWAAADA-GAGGSDLIAVKLSPEGEVLWRWQDGNAGSDWVTAATSIGSGGSIVLAGTSEATWQDSATTTGDDTTGLTTE 373

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BLAST of Ec-28_000300.1 vs. uniprot
Match: A0A2D5TXS0_9PROT (Big_5 domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2D5TXS0_9PROT)

HSP 1 Score: 175 bits (443), Expect = 8.890e-45
Identity = 135/379 (35.62%), Postives = 194/379 (51.19%), Query Frame = 1

Query:   34 QAGSSYDDDAVYGVSTDAEGSFFLAGKTTGSLDGITLNAGGEDMAVGKLDSDGVLLWSWQEGTTGEDTMSDAAATDDGGVVVGGYSNGTLSGVVSEGLGDFIAIKFDSDGTEEWRWQEGTEKDEVISTCSKTADGNVVLTGLTQGDWE-ETNTGLWALVAVKLDVSDGSVIWRYQAGVPSYSVVSRGAASRADGSIVIGGTTDGDWDGEL-TGYADFFSVALDEDGSELWRFQDGSLFSISSAWGVAALSDGSVVLAGTTDGDYAG-TNAGAQDFAVVKLTEEGVLDWTWQDGTLYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTTSYDNFIGVDVGPDGAALLAGFSQG 1161
            Q G+S  D A  GV+TD+ G+F++AG T G LDG  +N+G  D+ V K D+ G   W+ Q GT+  D     A    G V + GY++G L G  + G  D   +K+DS GT++W  Q GT   E  S  +  + GNV + G T+G  +  +N+G      +K + S G+  W  Q G  S    S G A+ + G+  + G+T G  DG   +G +D F +  D  G++ W  Q G+  S  SA GVA  S G+V +AG+T+G   G ++AG+ D  VVK   +G   WT Q GT   +   G AT   G   V AG T+G         E D+  V    +  GT  WT Q G++S D+  GV     G   +AG++ G
Sbjct:  145 QLGTSSCDGAK-GVATDSSGNFYVAGYTYGGLDG-NMNSGESDLFVVKYDASGTKQWTKQLGTSSHDFAFGVATGSSGNVYLAGYTSGGLDGNSNSGNRDLFVLKYDSSGTKQWTKQLGTSDYEEASGVATDSSGNVYVAGYTRGGLDGNSNSGNKDFFVIKYN-SSGTKQWTKQLGTSSSDSAS-GVATDSSGNFYVAGSTSGGLDGNTNSGSSDLFVLKYDSSGTKQWTKQLGTSSS-DSASGVATDSSGNVYVAGSTEGGLDGNSSAGSWDLFVVKYDSDGNKQWTQQLGTSSHDFAYGFATDSSGNVYV-AGMTYGGLDGNSNSGEIDLFIV--KYNSSGTKQWTKQLGSSSEDSASGVATDSSGNFYVAGYTYG 515

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BLAST of Ec-28_000300.1 vs. uniprot
Match: D8LAU1_ECTSI (PEGA domain family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAU1_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 1.600e-43
Identity = 133/353 (37.68%), Postives = 186/353 (52.69%), Query Frame = 1

Query:   19 EIWRFQAGSSYDDDAVYGVSTDAEGSFFLAGKTTGSLDGITLNAGGEDM--AVGKLDSDGVLLWSWQEGTTGEDTMSDAAATDDG-GVVVGGYSNGTLSGVVSEGLG--DFIAIKFDSDGTEE-WRWQEGTEKDEVISTCSKTADG-NVVLTGLTQGDWEETNTGLWALVAVKLDVSDGSVIWRYQAGVPSYSVVSRGAASRADGS-IVIGGTTDGDWDGELTGYADFFSVALDEDGSELWRFQDGSLFSISSAW--GVAALSDGSVVLAGT---TDGDYAGTNAGAQDFAVVKLTEEGV-LDWTWQDGTLYDES-FEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAV 1032
            E W +QAG++ + D +  V   ++GS  LAG + G  +G   +     +  A  KLD+DG +LW WQ      D  + AAA  +G  VV  G+++G   G    GLG  DF A+  D+D  E  W+WQ+G+E  +VI   +   +G +VV+ G T G++   N G    VA+KL+ +DGS +WR+Q G   +  +    A  ADG+  V+ G+T GDWDG+  G  DF  V LD DG+E WR+QDG+       W  GVA   DGS++LAG    T GD       +  F  +KL  +G  + W WQ G   D S    +A G DG  M+ AGYT G+W        DD  AV
Sbjct:    4 EEWYWQAGTA-ETDYLNAVLMGSDGSSVLAGLSFGLWNGTNADTSDASLRPAATKLDADGNILWKWQH-----DINAFAAAAGEGRSVVTAGFASGGWEGT---GLGFVDFTAVSLDADSGELLWKWQDGSEGFDVIYGATLADEGESVVMAGYTSGNFSGVNAGSNDFVAIKLNFTDGSEVWRWQDGTDEWDQIGA-VAETADGTGFVLVGSTQGDWDGDNAGNGDFAVVMLDVDGNESWRWQDGTT---EQEWLVGVAVQDDGSILLAGQQMETTGDE------SVFFTALKLQADGEEVTWRWQGGNAGDASRLYDMAAGADG-KMILAGYTDGSWEDGANLGADDFLAV 336

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BLAST of Ec-28_000300.1 vs. uniprot
Match: A0A5Q4GD14_9DEIN (BIG2 domain-containing protein (Fragment) n=1 Tax=Trueperaceae bacterium TaxID=2026798 RepID=A0A5Q4GD14_9DEIN)

HSP 1 Score: 166 bits (419), Expect = 7.780e-42
Identity = 134/392 (34.18%), Postives = 182/392 (46.43%), Query Frame = 1

Query:   25 WRFQAGSSYDDDAVYGVSTDAEGSFFLAGKTTGSLDGITLNAGGEDMAVGKLDSDGVLLWSWQEGTTGEDTMSDAAATDDGGVVVGGYSNGTLSGVVSEGLGDFIAIKFDSDGTEEWRWQEGTEKDEVISTCSKTADGNVVLTGLTQGDWEETNTGLWALVAVKLDVSDGSVIWRYQAGVPSYSVVSRGAASRADGSIVIGGTTDGDWDGELTGYADFFSVALDEDGSELWRFQDGSLFSISSAWGVAALSDGSVVLAGTTDGDYAGTNAGAQDFAVVKLTEEGVLDWTWQDGTLYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTTSYDNFIGVDVGPDGAALLAGFSQGAWEDPTADSYADF 1200
            W  Q G+S DD++  GV+TDA G+ ++ G T G L+G    AGG D  +   DSDG L W+ Q GT G D     A   +G V   G + GTL G  + G   F+   +D  GT  W  Q GT   +  +  +  A+GNV +TG T G  E T  G         D  +G + W  Q G  S    + G A+ A  ++ + G T G  +G   G  D F  + D  G+  W  Q G+      A GVA   +G+V + G T G+  G +AG  D  +     +G L W  Q GT   +    VAT   G  +  AG+T G    A    +D   A   S DG GTL WT+Q GT+S D   GV     G   +AG++ GA E   A  +  F
Sbjct:   96 WTRQFGTSSDDESR-GVATDASGNVYVVGFTDGVLEGD--GAGGVDAFIRSFDSDGTLRWTRQFGTNGTDEAFGVATDANGNVYAVGRTTGTLEGTNAGGADVFVR-SYDGGGTLRWTRQFGTSAFDTATGVATDANGNVYVTGRTDGALEGTGAGGTDAFIRSYD-GNGDLRWTRQFGTSSQDFAT-GVATDAHSNVYVSGFTGGALEGTHAGAVDAFIRSYDGGGTLRWTRQFGTSGD-DPALGVATDVNGNVYVTGYTAGELDGPSAGGLDAFIRSFDGDGTLRWARQFGTSSSDVAYDVATDASG-HVYAAGHTRGALEGANVGGDD---AFIRSYDGGGTLRWTHQFGTSSGDQAFGVATDASGGVYVAGYTLGALEGANAGGFDAF 476

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BLAST of Ec-28_000300.1 vs. uniprot
Match: A0A5Q4G6B6_9DEIN (BIG2 domain-containing protein n=1 Tax=Trueperaceae bacterium TaxID=2026798 RepID=A0A5Q4G6B6_9DEIN)

HSP 1 Score: 165 bits (417), Expect = 2.100e-41
Identity = 134/374 (35.83%), Postives = 178/374 (47.59%), Query Frame = 1

Query:   22 IWRFQAGSSYDDDAVYGVSTDAEGSFFLAGKTTGSLDGITLNAGGEDMAVGKLDSDGVLLWSWQEGTTGEDTMSDAAATDDGGVVVGGYSNGTLSGVVSEGLGDFIAIKFDSDGTEEWRWQEGTEKDEVISTCSKTADGNVVLTGLTQGDWEETNTGLWALVAVKLDVSDGSVIWRYQAGVPSYSVVSRGAASRADGSIVIGGTTDGDWDGELTGYADFFSVALDEDGSELWRFQDGSLFSISSAWGVAALSDGSVVLAGTTDGDYAGTNAGAQDFAVVKLTEEGVLDWTWQDGTLYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTTSYDNFIGVDVGPDGAALL 1143
            +W  Q G+S  DDA  GV+TDA G+ ++AG+T G L+G   NAG +D  V    SDG L W+ Q GT+ ED  S  A    G V   G + G L G  +  L  F+   FDSDGT  W  Q G++  +     +  A GNV + G T G  E  + G         D  DG++ W  Q G         G A+ A G++ + G T G  +G   G  D F  +   DG+  W  Q G+  S  +A GVA  + G+V + G T G   G +AG  D  +     +G L WT Q GT   +   GVAT   G   V +GYT G   A +       DA   S  GDGTL WT Q GT+S+D   GV     G  ++
Sbjct:  116 MWTRQFGTSSFDDAN-GVATDAYGNVYVAGRTFGDLEGA--NAGDQDAFVRSYGSDGALRWTRQFGTSSEDVASAVATDASGNVYAAGTTGGALEGPSAAVLDVFVR-SFDSDGTIRWTHQFGSDAADAALGVATDASGNVYVVGYTGGALEGPSAGGVDAFVRSFD-GDGALRWTRQFGTDGTDQAF-GVATDASGNVYVAGRTGGALEGPSAGGVDAFVRSYGGDGALRWARQFGTSASDVAA-GVATDASGNVYVVGFTAGALEGPSAGDSDAFLRSYGGDGALRWTRQFGTSASDVARGVATDASGNVYV-SGYTGG---ALEGTSVGGTDAFLRSFGGDGTLRWTRQFGTSSFDAGYGVAADAGGVYVV 478

The following BLAST results are available for this feature:

BLAST of Ec-28_000300.1 vs. uniprot

BLAST of Ec-28_000300.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FIH5_ECTSI	0.000e+0	100.00	Hemolysin-type calcium-binding region n=1 Tax=Ecto...	[more]
D7FIH4_ECTSI	3.000e-282	86.31	Hemolysin-type calcium-binding region n=1 Tax=Ecto...	[more]
A0A6H5L7T2_9PHAE	5.420e-282	80.32	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G7A3_ECTSI	6.650e-58	34.93	Hemolysin-type calcium-binding region n=1 Tax=Ecto...	[more]
D7FXY5_ECTSI	8.290e-57	35.38	von Willebrand factor type D domain protein n=1 Ta...	[more]
A0A6H5JF09_9PHAE	9.880e-50	36.94	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A2D5TXS0_9PROT	8.890e-45	35.62	Big_5 domain-containing protein n=1 Tax=Proteobact...	[more]
D8LAU1_ECTSI	1.600e-43	37.68	PEGA domain family protein n=1 Tax=Ectocarpus sili...	[more]
A0A5Q4GD14_9DEIN	7.780e-42	34.18	BIG2 domain-containing protein (Fragment) n=1 Tax=...	[more]
A0A5Q4G6B6_9DEIN	2.100e-41	35.83	BIG2 domain-containing protein n=1 Tax=Trueperacea...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_28	contig	chr_28:358020..364994 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	163.7
Seed ortholog evalue	2.3e-37
Seed eggNOG ortholog	2880.D8LRF5
Preferred name	RIPK4
Length	1548
KEGG ko	ko:K02861,ko:K08846,ko:K08847,ko:K08848,ko:K16289
KEGG Pathway	ko04064,ko04210,ko04217,ko04620,ko04621,ko04622,ko04623,ko04668,ko04722,ko05131,ko05152,ko05160,ko05169,map04064,map04210,map04217,map04620,map04621,map04622,map04623,map04668,map04722,map05131,map05152,map05160,map05169
Hectar predicted targeting category	other localisation
Gene id	Ec-28_000300.1
GOs	GO:0002009,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0008150,GO:0009653,GO:0009888,GO:0009889,GO:0010468,GO:0010556,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032502,GO:0044093,GO:0044424,GO:0044464,GO:0048518,GO:0048729,GO:0048856,GO:0050789,GO:0050794,GO:0051090,GO:0051091,GO:0051092,GO:0051171,GO:0051252,GO:0060255,GO:0060429,GO:0065007,GO:0065009,GO:0080090,GO:1903506,GO:2000112,GO:2001141
EggNOG free text desc.	protein kinase activity
EggNOG OGs	COG0515@1,KOG0192@2759
EC	2.7.11.1
COG Functional cat.	KLT
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko01000,ko01001

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-28_000300	Ec-28_000300	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_28 331413..367717 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-28_000300.1	Ec-28_000300.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_28 358020..364994 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-28_000300.1.9	Ec-28_000300.1.9	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 358020..358052 -
Ec-28_000300.1.8	Ec-28_000300.1.8	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 358557..358994 -
Ec-28_000300.1.7	Ec-28_000300.1.7	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 359898..360077 -
Ec-28_000300.1.6	Ec-28_000300.1.6	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 360536..360706 -
Ec-28_000300.1.5	Ec-28_000300.1.5	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 361067..361237 -
Ec-28_000300.1.4	Ec-28_000300.1.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 362185..362355 -
Ec-28_000300.1.3	Ec-28_000300.1.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 363241..363411 -
Ec-28_000300.1.2	Ec-28_000300.1.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 363959..364135 -
Ec-28_000300.1.1	Ec-28_000300.1.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 364959..364994 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-28_000300.1	CDS:Ec-28_000300.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_28 358020..358052 -

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_28:358020..364994-
coding sequence from alignment at chr_28:358020..364994-

mRNA sequence

>Ec-28_000300.1 ID=Ec-28_000300.1|Name=Ec-28_000300.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=516bp
MSLPGDEIWRFQAGSSYDDDAVYGVSTDAEGSFFLAGKTTGSLDGITLNA
GGEDMAVGKLDSDGVLLWSWQEGTTGEDTMSDAAATDDGGVVVGGYSNGT
LSGVVSEGLGDFIAIKFDSDGTEEWRWQEGTEKDEVISTCSKTADGNVVL
TGLTQGDWEETNTGLWALVAVKLDVSDGSVIWRYQAGVPSYSVVSRGAAS
RADGSIVIGGTTDGDWDGELTGYADFFSVALDEDGSELWRFQDGSLFSIS
SAWGVAALSDGSVVLAGTTDGDYAGTNAGAQDFAVVKLTEEGVLDWTWQD
GTLYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDG
DGTLLWTYQAGTTSYDNFIGVDVGPDGAALLAGFSQGAWEDPTADSYADF
AGVLIETGAVPATPAPADDIVITPSTPSPVIGTSGGTSEGSCGDGESFLI
TSDALPAVEGCFQNTQQLFSNGDEYEEYSVSGTSDWDQVSMFGGSSEFAD
DDGDEAVLPGVFHPG*

spliced messenger RNA

>Ec-28_000300.1 ID=Ec-28_000300.1|Name=Ec-28_000300.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1548bp|location=Sequence derived from alignment at chr_28:358020..364994- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCACTGCCGGGAGACGAGATCTGGCGCTTCCAGGCCGGATCGTCCTA
TGACGACGACGCGGTGTACGGAGTATCCACGGATGCCGAGGGGTCGTTCT
TCCTCGCGGGGAAGACGACAGGGAGCTTGGACGGCATAACCTTGAACGCG
GGAGGTGAAGACATGGCCGTGGGCAAGTTGGACAGCGATGGAGTTCTCCT
GTGGTCCTGGCAGGAAGGAACCACGGGCGAAGATACCATGTCCGATGCCG
CTGCGACGGACGACGGTGGCGTGGTGGTGGGAGGGTACTCTAACGGCACA
CTCAGCGGGGTCGTCTCCGAAGGGTTGGGAGATTTCATTGCGATAAAGTT
CGACTCAGACGGAACAGAGGAATGGCGATGGCAGGAAGGCACCGAGAAGG
ACGAAGTCATCTCAACGTGCAGCAAGACAGCGGACGGCAACGTGGTGCTG
ACGGGATTGACCCAGGGCGACTGGGAGGAGACAAATACGGGGCTGTGGGC
GCTTGTGGCGGTCAAGCTAGACGTTTCCGACGGGAGTGTCATCTGGCGAT
ACCAGGCGGGGGTGCCATCATACAGCGTTGTGTCGCGCGGGGCCGCCTCG
CGAGCGGACGGATCGATCGTGATTGGGGGCACTACCGACGGAGACTGGGA
CGGAGAGTTGACCGGGTACGCCGATTTCTTTTCGGTGGCCCTGGACGAAG
ATGGTTCAGAGCTTTGGCGGTTCCAGGACGGCAGCCTCTTCAGTATAAGC
TCAGCATGGGGCGTGGCAGCCCTCTCGGACGGCTCTGTGGTGCTCGCGGG
AACCACAGACGGTGACTACGCCGGAACGAACGCGGGGGCGCAAGACTTTG
CAGTTGTCAAGCTGACCGAAGAGGGTGTGCTTGACTGGACTTGGCAGGAT
GGGACACTGTACGACGAAAGCTTCGAGGGAGTGGCGACCGGAATCGACGG
CACCTCCATGGTTTTCGCGGGCTACACCTTCGGGACCTGGGCGGCAGCGC
AAGCCGAGGACGAGGACGACATGGACGCCGTGGGCATGTCCATGGATGGC
GACGGCACTTTGCTGTGGACGTATCAGGCCGGCACCACCAGTTACGACAA
CTTCATCGGCGTCGACGTCGGCCCCGACGGAGCCGCGCTGCTTGCGGGCT
TCTCCCAAGGGGCGTGGGAGGACCCCACGGCTGATTCCTACGCCGACTTC
GCCGGGGTTTTGATCGAGACGGGCGCCGTGCCTGCCACCCCGGCGCCGGC
CGACGACATCGTGATCACGCCATCAACTCCTTCTCCTGTCATAGGCACTT
CGGGAGGCACTTCGGAAGGGTCTTGCGGCGACGGCGAGTCGTTCCTCATA
ACGTCGGACGCGCTGCCCGCAGTCGAGGGGTGCTTCCAGAACACACAACA
ATTATTTTCGAATGGGGACGAGTACGAAGAGTACAGCGTCAGTGGAACAT
CCGATTGGGACCAAGTATCGATGTTTGGGGGATCCTCCGAATTCGCTGAT
GACGACGGCGATGAGGCCGTTCTACCTGGCGTTTTTCACCCAGGATGA

protein sequence of Ec-28_000300.1

>Ec-28_000300.1 ID=Ec-28_000300.1|Name=Ec-28_000300.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=516bp
MSLPGDEIWRFQAGSSYDDDAVYGVSTDAEGSFFLAGKTTGSLDGITLNA
GGEDMAVGKLDSDGVLLWSWQEGTTGEDTMSDAAATDDGGVVVGGYSNGT
LSGVVSEGLGDFIAIKFDSDGTEEWRWQEGTEKDEVISTCSKTADGNVVL
TGLTQGDWEETNTGLWALVAVKLDVSDGSVIWRYQAGVPSYSVVSRGAAS
RADGSIVIGGTTDGDWDGELTGYADFFSVALDEDGSELWRFQDGSLFSIS
SAWGVAALSDGSVVLAGTTDGDYAGTNAGAQDFAVVKLTEEGVLDWTWQD
GTLYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDG
DGTLLWTYQAGTTSYDNFIGVDVGPDGAALLAGFSQGAWEDPTADSYADF
AGVLIETGAVPATPAPADDIVITPSTPSPVIGTSGGTSEGSCGDGESFLI
TSDALPAVEGCFQNTQQLFSNGDEYEEYSVSGTSDWDQVSMFGGSSEFAD
DDGDEAVLPGVFHPG*

mRNA from alignment at chr_28:358020..364994-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-28_000300.1 ID=Ec-28_000300.1|Name=Ec-28_000300.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=6975bp|location=Sequence derived from alignment at chr_28:358020..364994- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTCACTGCCGGGAGACGAGATCTGGCGCTTCCAGGTGAGCTTGGGACA
AACTCGTGAAGAGCAGACAGACCGACACAATGAGAGCAATTTCGTCCGGT
TGGTGTGTAATTGTTTGTATGATCACCCCGGGGCGAGAACCCCCCGGGGC
GTCGGTACCTTTTTTTCCCTTCTTTTGGTGCTGGTTGGACCTCCCGTGGA
CACGCACGCACACGTTGTGCCGTTGGACTCTCTCGCTGGAACCCACAAGG
TCCGGCCTCAACTTCTCTTCGACAGCGGGCTGTACGACCACCTTCGTTTT
TTTTTATTTTTTTGCTTCTCGATGCTGCGTAAATTCGCTATCGTCTCTCT
GCGTCCGGCCATGGTGTGCATATTGCAGGTGCGATGTCGTTCCACTTATT
GTGCATAATATGCACAAGTGTCGCTTGATGTTTTGTGGGTCCAACGGTAC
CATACAGCTCTATGGCACCGGGCAACCCGTGTGTTTCTCGACAGGAGTAC
AGCACGGGGACGACCGAACCCTGTTTATCGCGGTCAAGCGAAGCTTCACG
TTGTGCTACGCCCAGCTTCGAACCGGCGACCGTTATCTGCCGTACGTCGG
ATTTGGCTGCTGTATTGTACGAAGCTTGTTGTTGTGGGTTATCTCGCTAC
TTCTCTACGGCGGCGGTGATGCGCGAACCCTAACCCTTCGCTTCGCTGCT
CGAGCGTCCTGTGAAGGGTTATTCTGTCCGTAGCCATTATTTAGTCCCCA
TCTACGAAGCAGATCGGGCTTGATTGAAGGAGCTTTGAGCGTACATAGAT
CGGTGTCTAAGAGCAAGGTACCGCCACACCACCACCGGTTTCAACCTGTT
CCCTGCCAGGCCGGATCGTCCTATGACGACGACGCGGTGTACGGAGTATC
CACGGATGCCGAGGGGTCGTTCTTCCTCGCGGGGAAGACGACAGGGAGCT
TGGACGGCATAACCTTGAACGCGGGAGGTGAAGACATGGCCGTGGGCAAG
TTGGACAGCGATGGAGTTCTCCTGTGGTCCTGGCAGGTGCTTTGTTTTTC
CCTCCCGACCAGTCTCGCTCGCGGCAGTCTCGCCCGAGGCAGTCTGTTGG
AACAGCATCAGCCGGTGCATCCACACGCATGGTTCTTTCATGCCCGTATA
GGGTGGCTGCTTGTTGCCCTGCTGTTTTTGGTGCGGGTGACGTGTGCTTT
GCGAACCAATCACGTCATATCAAAATATCTGCAAGGCCATTTCTTATTAA
TCTGCCAAATAATATTGTGTTCGGAACATGGTCTCGGTTTAGAACACCTC
TCTTGCTGAAGGATGAGGAATCAAAGTAAAAAACGACACAATTAGCGGGT
TTGACCCCATATGCTAGGGTTATTGCTCATAAAGCACAAGAGAGTGCGAG
CATGAGAGACGGTTGAGCGCTCGTGTCAAATTGTTTTTTGGAATTTAGAT
GTCTAAAACCTATTTTCTCAGAAACCCCCAAGCGCTGTTGCTGTGAGTAG
GTCGGAGCACCCTCGCACTCACCTAGATACCTTCCACGACTTGTTGTCGC
CACACGACTCAATCTCGCCGCTGGGGTTCCAAGGAAGGAACCACGGGCGA
AGATACCATGTCCGATGCCGCTGCGACGGACGACGGTGGCGTGGTGGTGG
GAGGGTACTCTAACGGCACACTCAGCGGGGTCGTCTCCGAAGGGTTGGGA
GATTTCATTGCGATAAAGTTCGACTCAGACGGAACAGAGGAATGGCGATG
GCAGGTGAGAAAAAGCAAAAAAGAAGAGTAGTACCGTAAGTGTGAGAGGA
GACAGGATTTATTTCTCGCCGGCGCTGTCGTTAGGGGTTGGCGGCACGTC
TGTTTGAAGGGGAGGTTCCTCCTCTTCTCGTGGTAGCTTCGCCGCGTGGT
AGCCAGGTACCGACGATGGCCCCACCCACTAGTTCACGGGCGGGTGACGC
CTTCTTTTCTTGTTCTAGCGAGAACGCTTCCTCGAGCGAGGTTGGCGGCA
ACGAACAACGGTGTTGCTAAATAGTGGTGGTCGTGGTCGTGGTGGTGGTG
GTGGTGTGGTGTGGTGTGTGGGTTGGGGGCGTAGCGGCAACTTGACCCGA
GACGGCGTTTTGTTTGCTTGTGACTCTTACCCACCAGTCCGTTCCGGAAT
ATAGTGGAGCTTTCGATACACCGGAATTAGTTGGATCCCAATAAAAACAT
GGGACACTCGTACATGTACACACGCAGACATCTGCGTCGACGAGTGTAGA
GAGAGGCGGCCTTTCCCAAACCACCGTGGTGGAGTGGGTCGCACGTGCCC
TTGAAAAGGAGCAAAGCAGTAGTCCACGTCCTACCTCTTGGAGCATTTCG
GGTGGTAAGGGGGGGGGGGGGGGGAGGCAGACAAACCGATAGAACCGGCA
TTGTTGCGGCGTGTGGTGCGGTCCCCTTTTTCGTGTCATTATCGACAGTC
CTCCGGAAGACAATCGTATGGGTGTTTTGCCAACTTTGTAAGGGGAGGGA
TGGTGGTGCGTGGCCGGCCACTGGCAGATGCATGTGCCCCTACTGCTGTG
ACGACACATCCATCACGGGCTGACGTGGGTTTTGCACAACATCGACATCA
CCTGATTTTCTGGTGTTTGGCACGTGCCGAGGAGCGCAGGAAGGCACCGA
GAAGGACGAAGTCATCTCAACGTGCAGCAAGACAGCGGACGGCAACGTGG
TGCTGACGGGATTGACCCAGGGCGACTGGGAGGAGACAAATACGGGGCTG
TGGGCGCTTGTGGCGGTCAAGCTAGACGTTTCCGACGGGAGTGTCATCTG
GCGATACCAGGTGGGGGGGTGGGGGGGATGGTATGGTGCACTCTATTGGT
GACAGGAGGGCGGCTTGTCCGCATGTACAGAGCTGTTTGATTGGCTGTGC
TTGGCTCCAGAAGTGACCCAACCGCTGCGTGTCCCCTTCCACCTTTCTTT
TCTGTATCCGCGATCTCTTGCCCCTCTCGACAGAGAGAAGCGTCACTCCC
TTGCGCATGTAGCAATGCTTTTCCTCGTCGTTTTTGCTCGGCTGTGCGTG
GAGCTATTCATGTTACAATTAAGACTTTTAAAAAAGTGTCTGGACGTCTT
TACCCAAGGTCGCTCAGCTTTTGTTTATGCTCGAGTGTACACCAAATTTA
CATGCCCGGTGTGCCAAGAATTCGAATAACTGCGGAATGGCATTTGCGAT
CGCTACGTTCGGACCTTGTTCGTAATATGAAGAAGCCAAGTTTTTTTTCT
ATTTTCGCCGGCGATGAAAGTTAAAGCTCGAACCAGCACAACAGCGTGCG
ACGACGAGGGAAAGAGTCTACTGCCCTACCGTGCGGGCGTTTGGCGTGTT
CACGATTCCCACGTTTCTGACGAGGGAGTCCGCGGCAGGCAACGGCCTAT
CGCCGTTTGCGGGTGGTTCCTCCCCCGTGGGTTTGATGCGGAATGCTTTC
ACTCGGCTGGGAGTTTTGTCTAGCAAAGCGGGCCCGTCCACCGTAGCCCA
CTGGTGACTCCGCAGCCTTTCAATTCGTATCTCCGCGAGTGGAATCTCGG
CGTGTGACAGCACGATGACAGCCATCATTTGTTCTGACGTGCACCCGAAC
ACCAACAAGCAGTATCGCCCCCGGGCTGTCCTTGCCATAAAGGTCCCCCA
CTCATTAATCTAGCGGGTCAAAATTCATGAAAGATTTCAAGCCACTCAAC
CGATTAATGCGTCGGCATTTGACAACTTTGCCGCGCATACCTCCATTTCT
TGGTCAGGCGGGGGTGCCATCATACAGCGTTGTGTCGCGCGGGGCCGCCT
CGCGAGCGGACGGATCGATCGTGATTGGGGGCACTACCGACGGAGACTGG
GACGGAGAGTTGACCGGGTACGCCGATTTCTTTTCGGTGGCCCTGGACGA
AGATGGTTCAGAGCTTTGGCGGTTCCAGGTTCGTGTGCGTGCGTGTATTG
GGACTATCGATTATTGCTCCGAGATAGAGCTCGTTATTCCGAAAACAAGA
GGTAGTCACTTGCACAACGTTCCCGTCCGGGGCGTGGTGGTGTCCAGCGG
TGAAAATGTTGGAGCTATCCGTAGGAAGCTGGTGGGACCGAGGGGTGGTC
GGTCACGGGCTGTTCAACGCAGCCATTCCTACCACTGTAAGCTGCTGCAG
CACGTGTGAGTGATCAACCCCTCCTATACCATAGCTGGCCCTTGGTTGTT
GACGGACAAAAGTAGGAATGACTTTGGCATTGATGCACACCATAGGTTTC
CTGAAGGCGATGTTTTGTGGGTGTTCACGACTCAACAGGACGGCAGCCTC
TTCAGTATAAGCTCAGCATGGGGCGTGGCAGCCCTCTCGGACGGCTCTGT
GGTGCTCGCGGGAACCACAGACGGTGACTACGCCGGAACGAACGCGGGGG
CGCAAGACTTTGCAGTTGTCAAGCTGACCGAAGAGGGTGTGCTTGACTGG
ACTTGGCAGGTATGGTCTTTGAAAACGACACCAAACCCCTTTTGTTTGTC
GTGTCGTCGATTCGTTTGTTAGCCACAGCTCTTTGTCCGCGCCGCACAGT
CTGGCGCCTGTCTAACTGAGAAGCTCTGATCCGGGGGATAGCCACGATGC
TGGCCACGCGTCATCGTCTTTCCCTTCCGAAGCATTCCCGCGAGGGCGGT
TCCTTCCCCAACTAAGTCTAACAGCCCACACGTTCAAGGTTGTACATCTA
TGCGGCAAAGACACGCTTGAAGCCTCTTGTTCGGTGCAATCACTCCCATG
CATCGGCTAATACCATGACAAGTGTGTGGTTGGTGCGACGCGAGTCGCGT
AGGCTGCGGTTTACTTCTGTCGAGTGTCGGGGAACACGTTTCATCGCGGC
TTACCGAACAGTTTGCAAACCCGCGCTGCACACGTGTCGGGGGCTGAAAA
TGACATCATATGTGCAGGATGGGACACTGTACGACGAAAGCTTCGAGGGA
GTGGCGACCGGAATCGACGGCACCTCCATGGTTTTCGCGGGCTACACCTT
CGGGACCTGGGCGGCAGCGCAAGCCGAGGACGAGGACGACATGGACGCCG
TGGGCATGTCCATGGATGGCGACGGCACTTTGCTGTGGACGTATCAGGTA
TCTTGTCTGCGTTCAGGTAGGACGTGAGTCACTGGTTGCCCGCAGGGGTC
TATGCACGTGGTAGGTGCCGTTAGGATCCTTCTTTGCGCCGCCTTCATCG
TGAACAAACAGAGTGGGGACAGAGACAAATCGAAGGCTGGCAATGACGAG
GCCAATTTGATTTATAGCTAGAACTCCAAGAAGAGAGTAAATTCACCGTA
CACAAGTTTGTATGATAGCCTCATGAGCCAACCGGCCTCGGTTATCGCTT
CAAGTCCTTTGCCCCCTCCCTGCTGCTGGTGTCGCTGCTGCACGACCATG
ACACCCCGCCGCCCTGTTTGTAAAGTTGGAGTGTATGTGTATTGACGTTT
GTCCTTCCTCTGTCGTCAATAAGGGTACATGCCTGGTATCTTGCGCTGTG
TAACGGCATGTCATGCGCGGGCCTAGGTTCCTCCTGGTCGAGCTGAGGCT
CTGATCACGGCGATCTTGCCTGTCATGGATTTTGATTGCCGGAGCTGTAC
GGTGGATATTGCCGAGAAATTTCAACCTCACGGCGTCGTCAGCTGGAAGT
TTCCTGCCGTTCTAGTTGCCTACACTTGTGTGTTCTTTCATGCCAAAGAG
CAAGGTACCTCGGCGGGCGGGCGTCGGAAGCGGTTCGAGAACATGATTTT
TGCTGTGTGTGTCCAGTTGCTTGCGTACATATCTCCCAAAAGCCCGCAAC
CATGTACCGCGTAGAACGGGTCTCTGTCGCCGTGTCCATGTTGTGTGAGG
CAGAGGGGTACCGCGGGTATGGTTGTGGGCCGCCACACGTTTGCGGTTGT
GGCGGTGCTTTCGCGCCCACTGTCCTTGAAGGGGTCGGTCCCTCAGAGCC
CCAACTCTCCGACCTTGCATCCCCGAACCTGATCCCATCCGTCCACATAG
GCCGGCACCACCAGTTACGACAACTTCATCGGCGTCGACGTCGGCCCCGA
CGGAGCCGCGCTGCTTGCGGGCTTCTCCCAAGGGGCGTGGGAGGACCCCA
CGGCTGATTCCTACGCCGACTTCGCCGGGGTTTTGATCGAGACGGGCGCC
GTGCCTGCCACCCCGGCGCCGGCCGACGACATCGTGATCACGCCATCAAC
TCCTTCTCCTGTCATAGGCACTTCGGGAGGCACTTCGGAAGGGTCTTGCG
GCGACGGCGAGTCGTTCCTCATAACGTCGGACGCGCTGCCCGCAGTCGAG
GGGTGCTTCCAGAACACACAACAATTATTTTCGAATGGGGACGAGTACGA
AGAGTACAGCGTCAGTGGAACATCCGATTGGGACCAAGTATCGATGTTTG
GGGGATCCTCCGAATTCGCTGATGACGACGGCGATGAGGTTAGTCGGTTT
GTTATTTTGTTCGTCACTCTGTTGCTGTTGGTTTCTTCAGTAACAGCGGG
ATTGGTTAGTTGGTCCGCGGACCTCGCAATAGACCCTGTGGGAAATCGTC
GTGAGGTACCTCGTTTAAGGTTACTTGGACGTGTCGGTGGGCGTCCATGG
CTGCTTCGTGTATGGATACGTACGTTTCGGGTTTCGGGTCACCCTCTGGA
GCGATGAGCGTGGCCAATAGCCCGTTTCAAGCGGTTGAACGCCCACAGAA
ACGCCCACGGACACGTCCGCTAAAACCCGAGTAGGGTAGTCCACTGTTTT
CGGCACAAGATGGTTGTTCTCCTGTAGTGCCGGCACATTGTAGGTTACCT
TTTGAATACCCAGCCAAGCCACCCCCACCCCCAAAACATCGGGTTCCCAA
GAGATTGGTAGGCATTTTTATCGATCTTCCAACGTGCCCGTGTCCTCGCT
GCGTTGCGTTTGTTCCTCCGAAACCACAACCCAACAGATCAGGCCGTTCT
ACCTGGCGTTTTTCACCCAGGATGA

Coding sequence (CDS) from alignment at chr_28:358020..364994-

>Ec-28_000300.1 ID=Ec-28_000300.1|Name=Ec-28_000300.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1548bp|location=Sequence derived from alignment at chr_28:358020..364994- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTCACTGCCGGGAGACGAGATCTGGCGCTTCCAGGCCGGATCGTCCTA
TGACGACGACGCGGTGTACGGAGTATCCACGGATGCCGAGGGGTCGTTCT
TCCTCGCGGGGAAGACGACAGGGAGCTTGGACGGCATAACCTTGAACGCG
GGAGGTGAAGACATGGCCGTGGGCAAGTTGGACAGCGATGGAGTTCTCCT
GTGGTCCTGGCAGGAAGGAACCACGGGCGAAGATACCATGTCCGATGCCG
CTGCGACGGACGACGGTGGCGTGGTGGTGGGAGGGTACTCTAACGGCACA
CTCAGCGGGGTCGTCTCCGAAGGGTTGGGAGATTTCATTGCGATAAAGTT
CGACTCAGACGGAACAGAGGAATGGCGATGGCAGGAAGGCACCGAGAAGG
ACGAAGTCATCTCAACGTGCAGCAAGACAGCGGACGGCAACGTGGTGCTG
ACGGGATTGACCCAGGGCGACTGGGAGGAGACAAATACGGGGCTGTGGGC
GCTTGTGGCGGTCAAGCTAGACGTTTCCGACGGGAGTGTCATCTGGCGAT
ACCAGGCGGGGGTGCCATCATACAGCGTTGTGTCGCGCGGGGCCGCCTCG
CGAGCGGACGGATCGATCGTGATTGGGGGCACTACCGACGGAGACTGGGA
CGGAGAGTTGACCGGGTACGCCGATTTCTTTTCGGTGGCCCTGGACGAAG
ATGGTTCAGAGCTTTGGCGGTTCCAGGACGGCAGCCTCTTCAGTATAAGC
TCAGCATGGGGCGTGGCAGCCCTCTCGGACGGCTCTGTGGTGCTCGCGGG
AACCACAGACGGTGACTACGCCGGAACGAACGCGGGGGCGCAAGACTTTG
CAGTTGTCAAGCTGACCGAAGAGGGTGTGCTTGACTGGACTTGGCAGGAT
GGGACACTGTACGACGAAAGCTTCGAGGGAGTGGCGACCGGAATCGACGG
CACCTCCATGGTTTTCGCGGGCTACACCTTCGGGACCTGGGCGGCAGCGC
AAGCCGAGGACGAGGACGACATGGACGCCGTGGGCATGTCCATGGATGGC
GACGGCACTTTGCTGTGGACGTATCAGGCCGGCACCACCAGTTACGACAA
CTTCATCGGCGTCGACGTCGGCCCCGACGGAGCCGCGCTGCTTGCGGGCT
TCTCCCAAGGGGCGTGGGAGGACCCCACGGCTGATTCCTACGCCGACTTC
GCCGGGGTTTTGATCGAGACGGGCGCCGTGCCTGCCACCCCGGCGCCGGC
CGACGACATCGTGATCACGCCATCAACTCCTTCTCCTGTCATAGGCACTT
CGGGAGGCACTTCGGAAGGGTCTTGCGGCGACGGCGAGTCGTTCCTCATA
ACGTCGGACGCGCTGCCCGCAGTCGAGGGGTGCTTCCAGAACACACAACA
ATTATTTTCGAATGGGGACGAGTACGAAGAGTACAGCGTCAGTGGAACAT
CCGATTGGGACCAAGTATCGATGTTTGGGGGATCCTCCGAATTCGCTGAT
GACGACGGCGATGAGGCCGTTCTACCTGGCGTTTTTCACCCAGGATGA

Synonyms

The feature 'Ec-28_000300.1' has the following synonyms


Synonym
Esi0120_0058
Esi_0120_0058