Ec-28_000280.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-28_000280.1
Unique NameEc-28_000280.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length650
Homology
[Close]
BLAST of Ec-28_000280.1 vs. uniprot
Match: A0A6H5L7T2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7T2_9PHAE)

HSP 1 Score: 937 bits (2423), Expect = 0.000e+0
Identity = 493/634 (77.76%), Postives = 522/634 (82.33%), Query Frame = 1 
Query:    1 MAAGKLDSDGAVLWSWQEGTTDEDALSDAAATDDGGVVFAGFFNGTLNGVASEGLGDFIAIKFDSDGTEEWRWQDGTEMDEGITTCSKTADGNVVLTGSTLGDWVETNTGLWALVAVKLDVTDGSVIWQYQAGVPSQSVVSRGSASRADGSIVIGGVTDGDWDGELTGFTDFFTVALDEDGSELWRFQDGSLLSSSSAWGVAALSDGSVVLAGTTDGNYAGTNAGAQDFAVVKLTEEGVLDWTWQDGTPYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTTNHDNFIGVDVGPDGAALLAGFSAGTWEDPTADFYADFAGVLIETGAVPATPAPADDIVITPSTPFPVTGTSGDTSEGSCGDGESFLITSDVLPVVQGCYQQTTLSFDDGGQYEEYTVSGLTEWEHITMFGSSSAFADDDGDEIMPFYLALISEEDDGTIIYCISNEDAVTVHPADATWTCDLDGTGTYEDVTDEEVSMDCGCTGTAPAPVVTDSPVVPPT----PTPVVSEGESTSSSSVPLGLLIGGIVGGLAFLALV-GIFVARRRARGDQSFGNAPARSKNYPAVAGGAAGDVAGGAGAAKGVIPLPPPPAYTEPPPPMADA 1887
            MAAGKLDSDGAVLW WQEG+T++D L+DAAATDDGGVVFAGF+NGTLNGV SEGLGDF AIKFDSDGTEEWRWQDGTE DE I TCSKTADGNVVLTG T GDWVETNTGLWALVAVKLDVTDGSVIWQYQAGVPS SVVSRG+ASRADGSIVIGG TDGDWDGELTG+ DFF+VAL+EDGSELWRFQDGS  S SSAWGVAALSDGSVVLAG TDG+YA TNAG QDFA+VKLTEEGVLDWTWQDGTPYD+ FEG ATGIDGTSMVF GYT+GTWAA QAEDE+D DAVGMSMDGDGTLLWTYQAGTT  + F+GVDV PDGAALLAG+S GTWED T DFYADFAGVLI TGAVPATPAPA   VI        TGTSG TSEGSCGDGESF ITSDVLPVV+GCYQQT  SFD+G +YEEYTVSG++ WEHI + G SSAFADDDGD IMPFYLA +SEEDDGTI+YC+SNEDAVTVHP DATWTCDL GTGT+EDVTDEE+SMDCGCTGT PAPVV DSPV PPT                                LAF+ALV GIFVARRRARGDQSFGNAPARSKNYPAVA        GGAGAAKG IP            PMADA
Sbjct:   58 MAAGKLDSDGAVLWYWQEGSTEDDTLADAAATDDGGVVFAGFYNGTLNGVPSEGLGDFFAIKFDSDGTEEWRWQDGTEKDEVILTCSKTADGNVVLTGMTQGDWVETNTGLWALVAVKLDVTDGSVIWQYQAGVPSYSVVSRGAASRADGSIVIGGSTDGDWDGELTGYADFFSVALNEDGSELWRFQDGSEFSISSAWGVAALSDGSVVLAGVTDGDYAETNAGEQDFALVKLTEEGVLDWTWQDGTPYDDGFEGAATGIDGTSMVFVGYTYGTWAAEQAEDEEDSDAVGMSMDGDGTLLWTYQAGTTGFETFVGVDVSPDGAALLAGYSTGTWEDSTTDFYADFAGVLIATGAVPATPAPAT--VIAXXXXXXXTGTSGGTSEGSCGDGESFRITSDVLPVVEGCYQQTDWSFDEGDEYEEYTVSGMSGWEHIAILGMSSAFADDDGDVIMPFYLAFVSEEDDGTIVYCVSNEDAVTVHPVDATWTCDLGGTGTFEDVTDEEISMDCGCTGT-PAPVVADSPVAPPTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAFVALVVGIFVARRRARGDQSFGNAPARSKNYPAVA--------GGAGAAKGDIPXXXXXXXXXXXXPMADA 680
[Close]
BLAST of Ec-28_000280.1 vs. uniprot
Match: D7FIH4_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH4_ECTSI)

HSP 1 Score: 904 bits (2337), Expect = 0.000e+0
Identity = 451/451 (100.00%), Postives = 451/451 (100.00%), Query Frame = 1 
Query:    1 MAAGKLDSDGAVLWSWQEGTTDEDALSDAAATDDGGVVFAGFFNGTLNGVASEGLGDFIAIKFDSDGTEEWRWQDGTEMDEGITTCSKTADGNVVLTGSTLGDWVETNTGLWALVAVKLDVTDGSVIWQYQAGVPSQSVVSRGSASRADGSIVIGGVTDGDWDGELTGFTDFFTVALDEDGSELWRFQDGSLLSSSSAWGVAALSDGSVVLAGTTDGNYAGTNAGAQDFAVVKLTEEGVLDWTWQDGTPYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTTNHDNFIGVDVGPDGAALLAGFSAGTWEDPTADFYADFAGVLIETGAVPATPAPADDIVITPSTPFPVTGTSGDTSEGSCGDGESFLITSDVLPVVQGCYQQTTLSFDDGGQYEEYTVSGLTEWEHITMFGSSSAFADDDGDE 1353
            MAAGKLDSDGAVLWSWQEGTTDEDALSDAAATDDGGVVFAGFFNGTLNGVASEGLGDFIAIKFDSDGTEEWRWQDGTEMDEGITTCSKTADGNVVLTGSTLGDWVETNTGLWALVAVKLDVTDGSVIWQYQAGVPSQSVVSRGSASRADGSIVIGGVTDGDWDGELTGFTDFFTVALDEDGSELWRFQDGSLLSSSSAWGVAALSDGSVVLAGTTDGNYAGTNAGAQDFAVVKLTEEGVLDWTWQDGTPYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTTNHDNFIGVDVGPDGAALLAGFSAGTWEDPTADFYADFAGVLIETGAVPATPAPADDIVITPSTPFPVTGTSGDTSEGSCGDGESFLITSDVLPVVQGCYQQTTLSFDDGGQYEEYTVSGLTEWEHITMFGSSSAFADDDGDE
Sbjct:    1 MAAGKLDSDGAVLWSWQEGTTDEDALSDAAATDDGGVVFAGFFNGTLNGVASEGLGDFIAIKFDSDGTEEWRWQDGTEMDEGITTCSKTADGNVVLTGSTLGDWVETNTGLWALVAVKLDVTDGSVIWQYQAGVPSQSVVSRGSASRADGSIVIGGVTDGDWDGELTGFTDFFTVALDEDGSELWRFQDGSLLSSSSAWGVAALSDGSVVLAGTTDGNYAGTNAGAQDFAVVKLTEEGVLDWTWQDGTPYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTTNHDNFIGVDVGPDGAALLAGFSAGTWEDPTADFYADFAGVLIETGAVPATPAPADDIVITPSTPFPVTGTSGDTSEGSCGDGESFLITSDVLPVVQGCYQQTTLSFDDGGQYEEYTVSGLTEWEHITMFGSSSAFADDDGDE 451
[Close]
BLAST of Ec-28_000280.1 vs. uniprot
Match: D7FIH5_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH5_ECTSI)

HSP 1 Score: 787 bits (2033), Expect = 1.810e-281
Identity = 390/451 (86.47%), Postives = 414/451 (91.80%), Query Frame = 1 
Query:    1 MAAGKLDSDGAVLWSWQEGTTDEDALSDAAATDDGGVVFAGFFNGTLNGVASEGLGDFIAIKFDSDGTEEWRWQDGTEMDEGITTCSKTADGNVVLTGSTLGDWVETNTGLWALVAVKLDVTDGSVIWQYQAGVPSQSVVSRGSASRADGSIVIGGVTDGDWDGELTGFTDFFTVALDEDGSELWRFQDGSLLSSSSAWGVAALSDGSVVLAGTTDGNYAGTNAGAQDFAVVKLTEEGVLDWTWQDGTPYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTTNHDNFIGVDVGPDGAALLAGFSAGTWEDPTADFYADFAGVLIETGAVPATPAPADDIVITPSTPFPVTGTSGDTSEGSCGDGESFLITSDVLPVVQGCYQQTTLSFDDGGQYEEYTVSGLTEWEHITMFGSSSAFADDDGDE 1353
            MA GKLDSDG +LWSWQEGTT ED +SDAAATDDGGVV  G+ NGTL+GV SEGLGDFIAIKFDSDGTEEWRWQ+GTE DE I+TCSKTADGNVVLTG T GDW ETNTGLWALVAVKLDV+DGSVIW+YQAGVPS SVVSRG+ASRADGSIVIGG TDGDWDGELTG+ DFF+VALDEDGSELWRFQDGSL S SSAWGVAALSDGSVVLAGTTDG+YAGTNAGAQDFAVVKLTEEGVLDWTWQDGT YDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTT++DNFIGVDVGPDGAALLAGFS G WEDPTAD YADFAGVLIETGAVPATPAPADDIVITPSTP PV GTSG TSEGSCGDGESFLITSD LP V+GC+Q T   F +G +YEEY+VSG ++W+ ++MFG SS FADDDGDE
Sbjct:   55 MAVGKLDSDGVLLWSWQEGTTGEDTMSDAAATDDGGVVVGGYSNGTLSGVVSEGLGDFIAIKFDSDGTEEWRWQEGTEKDEVISTCSKTADGNVVLTGLTQGDWEETNTGLWALVAVKLDVSDGSVIWRYQAGVPSYSVVSRGAASRADGSIVIGGTTDGDWDGELTGYADFFSVALDEDGSELWRFQDGSLFSISSAWGVAALSDGSVVLAGTTDGDYAGTNAGAQDFAVVKLTEEGVLDWTWQDGTLYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTTSYDNFIGVDVGPDGAALLAGFSQGAWEDPTADSYADFAGVLIETGAVPATPAPADDIVITPSTPSPVIGTSGGTSEGSCGDGESFLITSDALPAVEGCFQNTQQLFSNGDEYEEYSVSGTSDWDQVSMFGGSSEFADDDGDE 505
[Close]
BLAST of Ec-28_000280.1 vs. uniprot
Match: D7G7A3_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7A3_ECTSI)

HSP 1 Score: 209 bits (533), Expect = 7.200e-54
Identity = 138/369 (37.40%), Postives = 191/369 (51.76%), Query Frame = 1 
Query:   13 KLDSDGAVLWSWQEGTTDEDALSDAAATDDGGVVFAGFFNGTLNGVASEGLGDFIAIKFDSDGTEEWRWQDGTEMDE---GITTCSKTADGNVVLTGSTLGDWVETNTGLWALVAVKLDVTDGSVIWQYQAGVPSQSVVSRGSASRADGSIVIGGVTDGDWDGELTGFTDFFTVALDEDGSELWRFQDGSLLSSSSAWGVAAL--SDGSVVLAGTTDGNYAGTNAGAQDFAVVKLT-EEGVLDWTWQDGTPYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTTNHDNFIGVDVGPDGA----ALLAGFSAGTWEDPTADFYADFAGVLIETGAVPATPAPA 1089
            KL  DG   W WQ+GT+DED L+DA    DG VV AG   G  +G  + GLGD  A+K D  G   W+WQ GT  DE   GIT+ +  +   VVL G T G W  +N G +   A KLD  DG+ +W +Q G  +    ++  A   DGS+ + G T+GDW+    G TDF    LD +G+  WR+QDG+       +G+  +   DG V LAG + G + G N G++ F VVK+   +G   W WQ+GT   +   G A  +D  S+V  GY+ G WA   A   D   A    +D +G+ +W +QAGT + D      V    A    A+LAG + G+W+    +   DF  V ++ G V   P PA
Sbjct:  232 KLGPDGVYSWHWQDGTSDEDNLNDAVVNSDGSVVLAGSTEGDWSGT-NAGLGDLAAVKLDESGAVLWKWQSGTSDDELLVGITSANSASGSEVVLVGRTEGSWAASNVGGYDFCAAKLDA-DGNELWSWQDGTDADDT-TKAVAVDGDGSVFLAGYTEGDWNQPNEGETDFAVTKLDANGTLAWRWQDGT---EDEEFGLMVVVGRDGGVYLAGYSTGAFGGINKGSEGFVVVKIDGRDGSELWRWQNGTSAADKLFGAAI-LDDDSVVVTGYSEGDWAETNAGGSDFCAA---RLDANGSEMWRWQAGTDSSDWITAATVSQVVAGAPRAILAGTTEGSWDGDN-NGEEDFVLVSLDVGEVEPIPTPA 589
[Close]
BLAST of Ec-28_000280.1 vs. uniprot
Match: A0A6H5JF09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF09_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 5.650e-48
Identity = 128/330 (38.79%), Postives = 171/330 (51.82%), Query Frame = 1 
Query:   85 AAATDDGGVVFAGFFNGTLNGVASEGLGDFIAIKFDS-DGTEEWRWQDGTEMDEGITTCSKTADGN-VVLTGSTLGDWVETNTGLWA-LVAVKLDVTDGSVIWQYQAGVPSQSVVSRGSASRADGSIVIGGVTDGDWDGELTGFTDFFTVALDEDGSELWRFQDGSLLSSSSAWGVAALSDGSVVLAGTTDGNYAGT--NAGAQDFAVVKLTEEGVLDWTWQDGTPYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTTNHDNFIGV-DVGPDGAALLAGFSAGTWEDPTADFYADFAGVLIE 1056
            AA  +   +V AGF  G  NG AS G  DF+A+   S DG+  W WQDGTE D+ +    +   G+ VVL G T GDW + N G      AVKL+  DGS IW++Q G      + +  A+  D ++V+ G TDG   G   G TD   V LD DG  LWR+Q G+  S   +  V A  DGS+VLAG T G++ G+  NAG +D  VVKL ++G   W WQ+GT   +     A   DG   V AGY+ G WAAA A      D + + +  +G +LW +Q G    D       +G  G+ +LAG S  TW+D       D  G+  E
Sbjct:   48 AAGDESTAIVLAGFTKGGWNGAASAGGSDFVAVSLASGDGSRLWSWQDGTEEDDVLVGLVERGGGSAVVLAGRTGGDWADANAGEGTDFAAVKLEAGDGSEIWRFQDGSSGDDTL-KSVAAAEDDTVVLAGYTDGSLGGVNAGETDCTVVKLDADGGVLWRWQGGTAESDVCSATVVA-EDGSIVLAGYTVGSWDGSEANAGEEDLVVVKLDKDGNELWHWQEGTSLKDRLFAAALCEDG-GFVLAGYSEGDWAAADA-GAGGSDLIAVKLSPEGEVLWRWQDGNAGSDWVTAATSIGSGGSIVLAGTSEATWQDSATTTGDDTTGLTTE 373
[Close]
BLAST of Ec-28_000280.1 vs. uniprot
Match: D7FXY5_ECTSI (von Willebrand factor type D domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY5_ECTSI)

HSP 1 Score: 185 bits (470), Expect = 9.500e-48
Identity = 121/315 (38.41%), Postives = 167/315 (53.02%), Query Frame = 1 
Query:   85 AAATDDGGVVFAGFFNGTLNGVASEGLGDFIAIKFDS-DGTEEWRWQDGTEMDEGITTCSKTADGN-VVLTGSTLGDWVETNTGLWA-LVAVKLDVTDGSVIWQYQAGVPSQSVVSRGSASRADGSIVIGGVTDGDWDGELTGFTDFFTVALDEDGSELWRFQDGSLLSSSSAWGVAALSDGSVVLAGTTDGNYAGT--NAGAQDFAVVKLTEEGVLDWTWQDGTPYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTTNHDNFIGV-DVGPDGAALLAGFSAGTWED 1011
            AA  +   ++ AGF  G  +G AS G  DF+A+   S DG++ W WQDGTE D+ +    +   G+ VVL G T GDW + N G      AVKL+  DGS IW++Q G      + +  A+  D ++V+ G T+G   G+  G TD   V LD DG  LWR+Q G+  S   +   A   DGS+V+AG T G++ G+  NAG  D  VVKL ++G   W WQ+GTP  +     A   DG   V AGY+ G WAAA A      D + + +  +G +LW +Q G    D        G  G+ +LAG S  TW+D
Sbjct:  101 AAGDESTAIILAGFTKGGWDGAASAGGSDFVAVSVASGDGSQLWSWQDGTEEDDVLMGVVERGGGSAVVLAGRTGGDWADANAGEGTDFAAVKLEAGDGSEIWRFQDGSSGDDTL-KSVAAAEDDTVVLAGYTEGSLGGDNAGETDCAVVKLDADGGVLWRWQGGTAESDVCS-AAAVAEDGSIVVAGYTVGSWGGSEANAGEDDLVVVKLDKDGNELWHWQEGTPLKDRLFAAALCEDG-GFVLAGYSEGDWAAADA-GAGGSDLIAVKLSPEGEVLWRWQDGNAGSDWVTAAASTGSGGSIVLAGTSEATWQD 411
[Close]
BLAST of Ec-28_000280.1 vs. uniprot
Match: A0A6H5JZC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZC7_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 6.570e-39
Identity = 98/234 (41.88%), Postives = 129/234 (55.13%), Query Frame = 1 
Query:   40 WSWQEGTTDEDALSDAAATDDGGVVFAGFFNGTLNGVASEGLGDFIAIKFDSDGTEEWRWQDGTEMDEGITTCSKTADGNVVLTGSTLGDWVETNTGLWALVAVKLDVTDGSVIWQYQAGVPSQSV-VSRGSASRADGS-IVIGGVTDGDWDGELTGFTDFFTVALDEDGSELWRFQDGSLLSSSSAWGVAALSDGSVVLAGTTDGNYAGTNAGAQDFAVVKLTEEGVLDWTWQ 735
            W WQ G    + +   AA  +G +V  G  +G     AS G  DF+A+K   DG   W WQDGT  ++ +      +DG+VVL GST GDW  TN GL    AVKLD + G+V+W++Q+G     + V   SA+ A GS +V+ G T+G W     G  DF    LD DG+ELW +QDG+    ++   VA   DGSV LAG T+G++   N G  DFAV KL   G L W WQ
Sbjct:    6 WRWQGGGPANENMKGVAAGGNGTIVAVGRTDGDFFPFASLGGFDFLAVKIGPDGLYLWHWQDGTSDEDNLNDAVVNSDGSVVLAGSTEGDWGGTNAGLGDFAAVKLDES-GAVLWKWQSGTSDDELLVGITSANSASGSEVVLVGRTEGSWAASNAGGYDFCAAKLDADGNELWSWQDGTGADDTTK-AVAVDGDGSVFLAGYTEGDWNQPNEGETDFAVTKLEANGTLAWRWQ 237
[Close]
BLAST of Ec-28_000280.1 vs. uniprot
Match: D8LAU1_ECTSI (PEGA domain family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAU1_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 7.650e-38
Identity = 126/375 (33.60%), Postives = 174/375 (46.40%), Query Frame = 1 
Query:   40 WSWQEGTTDEDALSDAAATDDGGVVFAGFFNGTLNGVASEGLGDFI---AIKFDSDGTEEWRWQDGTEMDEGITTCSKTADGNVVLTGSTLGDWVETNTGLWALVAVKLDVTDGSVIWQYQAGVPSQSVVSRGSASRADGSIVIGGVTDGDWDGELTGFTDFFTVALD-EDGSELWRFQDGSLLSSSSAW----GVAALSDGS-VVLAGTTDGNYAGTNAGAQDFAVVKLTEEGVLDWTWQDGTPYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTTNH-DNFIGVDVGPDGAALLAGFSAGTWEDPTADFYADFAGVLIETGAV-PATPAPADDIV----ITPSTP 1119
            W WQ GT + D L+      DG  V AG   G  NG  ++     +   A K D+DG   W+WQ     D      +     +VV  G   G W  T  G     AV LD   G ++W++Q G     V+   + +    S+V+ G T G++ G   G  DF  + L+  DGSE+WR+QDG+       W     VA  +DG+  VL G+T G++ G NAG  DFAVV L  +G   W WQDGT   E   GVA   DG S++ AG    T      ++     A+ +  DG+  + W +Q G          +  G DG  +LAG++ G+WED       DF  V++ T A  PA  +P  D V      PSTP
Sbjct:    6 WYWQAGTAETDYLNAVLMGSDGSSVLAGLSFGLWNGTNADTSDASLRPAATKLDADGNILWKWQ----HDINAFAAAAGEGRSVVTAGFASGGWEGTGLGFVDFTAVSLDADSGELLWKWQDGSEGFDVIYGATLADEGESVVMAGYTSGNFSGVNAGSNDFVAIKLNFTDGSEVWRWQDGT-----DEWDQIGAVAETADGTGFVLVGSTQGDWDGDNAGNGDFAVVMLDVDGNESWRWQDGTTEQEWLVGVAVQDDG-SILLAGQQMET----TGDESVFFTALKLQADGE-EVTWRWQGGNAGDASRLYDMAAGADGKMILAGYTDGSWEDGANLGADDFLAVMLNTIATTPAPSSPGGDTVGGPTAAPSTP 365
[Close]
BLAST of Ec-28_000280.1 vs. uniprot
Match: A0A6H5LJ25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJ25_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 5.240e-35
Identity = 100/310 (32.26%), Postives = 151/310 (48.71%), Query Frame = 1 
Query:  109 VVFAGFFNGTLNGVASEGLG--DFIAIKFDSDGTEEWRWQDGTEMDEGITTCSKTADGNVVL-------TGSTLGDWVETNTGLWALVAVKLDVT----DGSVIWQYQAGVPSQSVVSRGSASRADGSIVIGGVTDGDWDGELTGFTDFFTVALDEDGSELWRFQDGSLLSSSSAWGVAALSDGSVVLAGTTDGNYAGTNAGAQDFAVVKLTEEGVLDWTWQDGTPYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTTNHDNFIGVDVGPDGAALLAGFSAG 999
             + AG    TL   A+E  G  D++A+K DSDG E W  Q G    + +T  +   DG++ L       + ++ G W  ++T      A + +V     DG  +WQ++    + S ++   A    G +++GG+   D        TDF    LD  G+  WR+Q  +      A    A ++GS VL G T G++ GT+AG  DF  VKL + G   W WQDGT  D+  E V    DG S V AG+T+G+W++  A+     D   + +  DG  +W +Q GTT  D   G  +  DG+ +L+G S G
Sbjct:   33 AILAGRCRFTLGDWAAENAGGSDWVAVKLDSDGNELWSIQGGGSGYDSVTAVATGEDGSIFLALDVQTSSATSSGSWSNSSTTGGESAAFQFEVIKLSGDGGQLWQWKDDDTNASRLAEAIAVDQQGGVLVGGLAFDD------AGTDFAACKLDSSGNVTWRWQ--ATTDGLDAVSSIAPANGSFVLGGRTTGDFNGTSAGGTDFVAVKLDDSGTEVWRWQDGTAEDDFVEAVVHSDDG-SAVLAGHTYGSWSSDNADGSFSKDFAAVMLSSDGKEIWRWQDGTTEDDTLEGAAIQGDGSVVLSGNSGG 333
[Close]
BLAST of Ec-28_000280.1 vs. uniprot
Match: A0A5Q4GD14_9DEIN (BIG2 domain-containing protein (Fragment) n=1 Tax=Trueperaceae bacterium TaxID=2026798 RepID=A0A5Q4GD14_9DEIN)

HSP 1 Score: 138 bits (348), Expect = 2.080e-31
Identity = 118/331 (35.65%), Postives = 155/331 (46.83%), Query Frame = 1 
Query:   16 LDSDGAVLWSWQEGTTDEDALSDAAATDDGGVVFAGFFNGTLNGVASEGLGDFIAIKFDSDGTEEWRWQDGTEMDEGITTCSKTADGNVVLTGSTLGDWVETNTGLWALVAVKLDVTDGSVIWQYQAGVPSQSVVSRGSASRADGSIVIGGVTDGDWDGELTGFTDFFTVALDEDGSELWRFQDGSLLSSSSAWGVAALSDGSVVLAGTTDGNYAGTNAGAQDFAVVKLTEEGVLDWTWQDGTPYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTTNHDNFIGVDVGPDGAALLAGFSAGTWE 1008
            +D  G + W+ Q GT+ +D     A    G V   GF +G L G  + G+  FI   FDSDGT  W  Q GT   +     +  A+GNV   G T G    TN G  A V V+     G++ W  Q G  S    + G A+ A+G++ + G TDG  +G   G TD F  + D +G   W  Q G+  S   A GVA  +  +V ++G T G   GT+AGA D  +      G L WT Q GT  D+   GVAT ++G   V  GYT G      A     +DA   S DGDGTL W  Q GT++ D    V     G    AG + G  E
Sbjct:   88 VDPLGVLAWTRQFGTSSDDESRGVATDASGNVYVVGFTDGVLEGDGAGGVDAFIR-SFDSDGTLRWTRQFGTNGTDEAFGVATDANGNVYAVGRTTGTLEGTNAG-GADVFVRSYDGGGTLRWTRQFGT-SAFDTATGVATDANGNVYVTGRTDGALEGTGAGGTDAFIRSYDGNGDLRWTRQFGTS-SQDFATGVATDAHSNVYVSGFTGGALEGTHAGAVDAFIRSYDGGGTLRWTRQFGTSGDDPALGVATDVNGNVYV-TGYTAGELDGPSA---GGLDAFIRSFDGDGTLRWARQFGTSSSDVAYDVATDASGHVYAAGHTRGALE 410
The following BLAST results are available for this feature:
BLAST of Ec-28_000280.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7T2_9PHAE0.000e+077.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIH4_ECTSI0.000e+0100.00Hemolysin-type calcium-binding region n=1 Tax=Ecto... [more]
D7FIH5_ECTSI1.810e-28186.47Hemolysin-type calcium-binding region n=1 Tax=Ecto... [more]
D7G7A3_ECTSI7.200e-5437.40Hemolysin-type calcium-binding region n=1 Tax=Ecto... [more]
A0A6H5JF09_9PHAE5.650e-4838.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXY5_ECTSI9.500e-4838.41von Willebrand factor type D domain protein n=1 Ta... [more]
A0A6H5JZC7_9PHAE6.570e-3941.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LAU1_ECTSI7.650e-3833.60PEGA domain family protein n=1 Tax=Ectocarpus sili... [more]
A0A6H5LJ25_9PHAE5.240e-3532.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A5Q4GD14_9DEIN2.080e-3135.65BIG2 domain-containing protein (Fragment) n=1 Tax=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:334956..345584 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score149.8
Seed ortholog evalue4.3e-33
Seed eggNOG ortholog2880.D8LRF5
Preferred nameRIPK4
Length1950
KEGG koko:K02861,ko:K08846,ko:K08847,ko:K08848,ko:K16289
KEGG Pathwayko04064,ko04210,ko04217,ko04620,ko04621,ko04622,ko04623,ko04668,ko04722,ko05131,ko05152,ko05160,ko05169,map04064,map04210,map04217,map04620,map04621,map04622,map04623,map04668,map04722,map05131,map05152,map05160,map05169
Hectar predicted targeting categoryother localisation
Gene idEc-28_000280.1
GOsGO:0002009,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0008150,GO:0009653,GO:0009888,GO:0009889,GO:0010468,GO:0010556,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032502,GO:0044093,GO:0044424,GO:0044464,GO:0048518,GO:0048729,GO:0048856,GO:0050789,GO:0050794,GO:0051090,GO:0051091,GO:0051092,GO:0051171,GO:0051252,GO:0060255,GO:0060429,GO:0065007,GO:0065009,GO:0080090,GO:1903506,GO:2000112,GO:2001141
EggNOG free text desc.protein kinase activity
EggNOG OGsCOG0515@1,KOG0192@2759
EC2.7.11.1
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_000280Ec-28_000280Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_28 331413..352909 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000280.1Ec-28_000280.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_28 334956..345584 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000280.1.9Ec-28_000280.1.9Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 334956..335440 -
Ec-28_000280.1.8Ec-28_000280.1.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 335682..335793 -
Ec-28_000280.1.7Ec-28_000280.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 336073..336510 -
Ec-28_000280.1.6Ec-28_000280.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 337452..337631 -
Ec-28_000280.1.5Ec-28_000280.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 339031..339201 -
Ec-28_000280.1.4Ec-28_000280.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 339571..339741 -
Ec-28_000280.1.3Ec-28_000280.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 343750..343920 -
Ec-28_000280.1.2Ec-28_000280.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 344598..344768 -
Ec-28_000280.1.1Ec-28_000280.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 345534..345584 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000280.1CDS:Ec-28_000280.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_28 334956..335440 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-28_000280.1 ID=Ec-28_000280.1|Name=Ec-28_000280.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=650bp
MAAGKLDSDGAVLWSWQEGTTDEDALSDAAATDDGGVVFAGFFNGTLNGV
ASEGLGDFIAIKFDSDGTEEWRWQDGTEMDEGITTCSKTADGNVVLTGST
LGDWVETNTGLWALVAVKLDVTDGSVIWQYQAGVPSQSVVSRGSASRADG
SIVIGGVTDGDWDGELTGFTDFFTVALDEDGSELWRFQDGSLLSSSSAWG
VAALSDGSVVLAGTTDGNYAGTNAGAQDFAVVKLTEEGVLDWTWQDGTPY
DESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTL
LWTYQAGTTNHDNFIGVDVGPDGAALLAGFSAGTWEDPTADFYADFAGVL
IETGAVPATPAPADDIVITPSTPFPVTGTSGDTSEGSCGDGESFLITSDV
LPVVQGCYQQTTLSFDDGGQYEEYTVSGLTEWEHITMFGSSSAFADDDGD
EIMPFYLALISEEDDGTIIYCISNEDAVTVHPADATWTCDLDGTGTYEDV
TDEEVSMDCGCTGTAPAPVVTDSPVVPPTPTPVVSEGESTSSSSVPLGLL
IGGIVGGLAFLALVGIFVARRRARGDQSFGNAPARSKNYPAVAGGAAGDV
AGGAGAAKGVIPLPPPPAYTEPPPPMADAGDIDLPPPPAYSEPPPPFSG*
back to top

spliced messenger RNA

>Ec-28_000280.1 ID=Ec-28_000280.1|Name=Ec-28_000280.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1950bp|location=Sequence derived from alignment at chr_28:334956..345584- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCCGCGGGCAAGTTGGACAGCGATGGGGCTGTCCTGTGGTCCTGGCA
GGAAGGAACCACGGACGAAGATGCCTTGTCCGACGCCGCTGCGACGGACG
ACGGTGGCGTGGTGTTCGCAGGGTTTTTTAACGGCACACTCAACGGGGTC
GCCTCCGAAGGGTTGGGAGATTTCATTGCGATAAAGTTCGACTCAGACGG
AACTGAGGAATGGCGATGGCAGGACGGGACCGAGATGGACGAAGGCATCA
CAACGTGCAGCAAGACAGCAGACGGAAACGTGGTGCTGACGGGCTCGACC
CTGGGAGACTGGGTCGAGACAAACACGGGGCTATGGGCGCTTGTGGCGGT
CAAGCTAGACGTTACCGACGGGAGTGTCATCTGGCAATACCAGGCGGGGG
TGCCATCACAAAGCGTTGTGTCGCGCGGGTCCGCCTCGCGAGCGGACGGA
TCGATCGTGATTGGGGGTGTAACCGACGGAGACTGGGACGGAGAGTTGAC
CGGGTTCACCGATTTCTTTACGGTGGCCCTGGACGAAGATGGTTCGGAGC
TATGGCGGTTCCAGGACGGCAGCCTCTTGAGTTCAAGCTCAGCATGGGGC
GTGGCAGCCCTCTCGGACGGCTCTGTGGTGCTCGCGGGAACCACAGACGG
TAACTACGCCGGAACGAACGCGGGGGCACAAGACTTTGCAGTTGTCAAGC
TGACCGAAGAGGGTGTGCTTGACTGGACTTGGCAGGATGGGACACCGTAC
GACGAAAGCTTCGAAGGAGTGGCGACCGGAATCGACGGCACCTCCATGGT
TTTCGCTGGCTACACCTTCGGGACCTGGGCGGCAGCGCAAGCCGAGGACG
AGGACGACATGGACGCCGTGGGCATGTCCATGGATGGCGACGGCACTTTG
CTGTGGACGTATCAGGCCGGCACCACCAATCACGACAACTTCATCGGCGT
CGACGTCGGCCCCGACGGAGCCGCGCTGCTTGCGGGCTTCTCCGCAGGGA
CGTGGGAGGACCCCACGGCTGATTTCTATGCTGACTTCGCCGGGGTTTTG
ATCGAGACGGGCGCCGTGCCCGCCACCCCGGCGCCGGCCGACGACATCGT
GATCACGCCATCAACTCCTTTTCCTGTCACAGGCACTTCGGGAGATACTT
CGGAAGGGTCTTGCGGCGACGGCGAGTCGTTCCTCATAACGTCGGACGTG
CTGCCCGTTGTCCAGGGGTGCTACCAGCAAACAACTTTGTCGTTCGACGA
CGGGGGCCAGTACGAAGAGTACACCGTCAGTGGCCTGACCGAGTGGGAGC
ACATAACCATGTTCGGGAGCTCCTCCGCCTTTGCTGATGACGACGGCGAT
GAGATCATGCCGTTCTACCTAGCATTAATCTCCGAAGAAGACGATGGGAC
CATCATTTATTGCATTTCGAACGAAGACGCCGTGACTGTCCACCCTGCCG
ACGCCACGTGGACATGCGACCTCGACGGCACCGGCACCTACGAAGACGTT
ACCGACGAGGAGGTTTCGATGGACTGTGGGTGCACTGGCACCGCCCCCGC
ACCCGTTGTAACGGATAGTCCTGTGGTCCCTCCTACCCCGACCCCCGTAG
TATCGGAAGGGGAGTCGACGTCTTCTTCTTCCGTCCCGCTTGGACTGCTT
ATTGGTGGCATTGTCGGCGGCTTGGCGTTTCTGGCACTCGTCGGCATCTT
TGTGGCGAGACGCCGAGCGAGAGGTGATCAGAGCTTCGGCAACGCTCCTG
CCCGCTCTAAAAATTATCCCGCTGTTGCGGGTGGTGCTGCTGGTGATGTT
GCAGGTGGTGCTGGTGCTGCTAAGGGAGTCATCCCGCTGCCTCCCCCGCC
CGCATATACAGAACCCCCTCCGCCCATGGCAGACGCCGGGGATATCGATC
TTCCACCGCCGCCAGCGTACTCGGAACCGCCTCCACCGTTCAGTGGTTGA
back to top

protein sequence of Ec-28_000280.1

>Ec-28_000280.1 ID=Ec-28_000280.1|Name=Ec-28_000280.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=650bp
MAAGKLDSDGAVLWSWQEGTTDEDALSDAAATDDGGVVFAGFFNGTLNGV
ASEGLGDFIAIKFDSDGTEEWRWQDGTEMDEGITTCSKTADGNVVLTGST
LGDWVETNTGLWALVAVKLDVTDGSVIWQYQAGVPSQSVVSRGSASRADG
SIVIGGVTDGDWDGELTGFTDFFTVALDEDGSELWRFQDGSLLSSSSAWG
VAALSDGSVVLAGTTDGNYAGTNAGAQDFAVVKLTEEGVLDWTWQDGTPY
DESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTL
LWTYQAGTTNHDNFIGVDVGPDGAALLAGFSAGTWEDPTADFYADFAGVL
IETGAVPATPAPADDIVITPSTPFPVTGTSGDTSEGSCGDGESFLITSDV
LPVVQGCYQQTTLSFDDGGQYEEYTVSGLTEWEHITMFGSSSAFADDDGD
EIMPFYLALISEEDDGTIIYCISNEDAVTVHPADATWTCDLDGTGTYEDV
TDEEVSMDCGCTGTAPAPVVTDSPVVPPTPTPVVSEGESTSSSSVPLGLL
IGGIVGGLAFLALVGIFVARRRARGDQSFGNAPARSKNYPAVAGGAAGDV
AGGAGAAKGVIPLPPPPAYTEPPPPMADAGDIDLPPPPAYSEPPPPFSG*
back to top

mRNA from alignment at chr_28:334956..345584-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-28_000280.1 ID=Ec-28_000280.1|Name=Ec-28_000280.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=10629bp|location=Sequence derived from alignment at chr_28:334956..345584- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGCCGCGGGCAAGTTGGACAGCGATGGGGCTGTCCTGTGGTCCTGGCA
GGTACGTTGGTTTCGTCTGAACGCACGCGGCGGCCTGTTGGAACAGCGTC
AGCCAGTGCATCCACACGCAGGTTCTTTCACACCGGCTGGGTGGCTGCTT
GTCACGCTGCTGTTTTTTTGTGCAGGTGCCGTGTGCTGTGGGGAACCGAT
CAAGGCATAGAAAAATCTCTCTTTAAGGCCAATTCGTAAGCTACCGGGAA
TCGAAAAATCGGGTTGCTGCTTTCCGATTTCCAGGAAACAAACACCTGGT
CTCTTAACCCGCTTGTCTTGCAGAATTATGGATACTGTTAAAAATGCATT
GCAAAACCAGCGGGTTTGACCCCGTATGCAAGGGTTATTCCTCTGAAAGC
AAAAGAGAGTGCGAGTATGAGAGGCGGGTGAGCGCTCCTGTCTGTGCTCC
ACTAAAAGCCGGGACGTCTAACCCACCCTGCTTCCCTCGGCCTCTACGTA
CTAGCCGTTCTCTTACGTAGTCCCGTCATGTGAAGCTGGACCCCATTTTC
CGTACGCCTCTACCGCCGTCACACGTCGACACTGCGACCACTCCGGCGTT
GCTTGGACAAAGTGTCCTCCCCTTGTCGCATCCACAGCTTCCTAGATTTC
TGGTGTACCGCTACTGCCCTGTGATACCCGACCGCAAAACCTACTGCTCT
TGGGGGAAGCTCCCAAGCGCTGTTGTTGCTGTGAGAAGGGCGGAGCACGC
TCGCACTCCTGCCGCAAATGTATGTAGGCTTCTCTAATTTACGTTTTTCG
CCGCTGGGGTTCCAAGGAAGGAACCACGGACGAAGATGCCTTGTCCGACG
CCGCTGCGACGGACGACGGTGGCGTGGTGTTCGCAGGGTTTTTTAACGGC
ACACTCAACGGGGTCGCCTCCGAAGGGTTGGGAGATTTCATTGCGATAAA
GTTCGACTCAGACGGAACTGAGGAATGGCGATGGCAGGTAAGAAAACCAG
CCACAGCAGCATTAATGAGGTGACATACTTCTCGCCCACGTTGGGGGTGG
GGGTACATCCGTTTGAACGGGAGGGATTTTTGTGGTAGCTTTGGCCCCAT
GGTAGCGGGGCAAGTGTGATGCTCAACACCGGGGTGGGCGAATTCCGAGA
AAAACTCGTGGAGGTTGGCGGCAACGAATAACGGCGTTGCTAGTGGTCGT
GGTGGTGGTGGGCTCGAGGGTACGTCACGCGAGACAGGATTTAATTCTTG
CCTTTGACACTTAAGCAGTACCAGTCTGAGTGGAACTTTGGATACACCGA
ACCACCGTGGTCATCGTTCAAGTTCTTGGAACATTCCGCGTGATATGACG
GGGGGGGAGATGGTGTGCCGGCAGGCAGACAGATAGAACGGGGTTTGCTG
TTGCGTGAGTCGCCTTTAGGTCACCTTATTCGTGCTTGTTTTCGACCGTC
TTAACCGAAGACAATCATTGTGGGTGTTGCCGCCATTGTTGTACCACTGT
ACCTCGGTTGTATGTAAAGGGGAGGGATGGTGGTGCGTGACCCGTCACTT
CGCAGATAGATGCATGCGTGCTCTGTGAAGACACGCCCGTTACGGCCAGG
CATGGATTTTGCACACCATTACCACCACTTGCTTTTCTCGTGCCTGGCGT
GCGCCGAGGAGCAGGACGGGACCGAGATGGACGAAGGCATCACAACGTGC
AGCAAGACAGCAGACGGAAACGTGGTGCTGACGGGCTCGACCCTGGGAGA
CTGGGTCGAGACAAACACGGGGCTATGGGCGCTTGTGGCGGTCAAGCTAG
ACGTTACCGACGGGAGTGTCATCTGGCAATACCAGGTGGGTGGGGCGGGT
ATGGAATGGCGCAATGGTTGTCAGAGAGCGGCCCATCTGAGATGTACAGA
GCTGCTTGATTCTGTGTTTGGCTCCGGAAGTGATACAACCGCTCCATCGC
TCCCTCCAGTTTTTCTGTATCCTCGATCTCTTGCCCTGTCGCGAGAAGTG
TAACGCTCGAATGTAGTGACTAGTGGTTTTCGTCGTCGTTTTTGCTCGGC
AGTACGTGGAGTTAACCAACTTCGAACTTACTCTCAACAGCACTTGATGT
CTCGATCAGAGGTCGCTCTGTCTTTGTTAACACTCGAGTTTTCACCAAAT
TTACATATCCGGGGTACCAAAGTTCGGAACGATGTGGATTTGCTACGTTT
GGATCTGCTTCGTAACATGAAAAAGCCAGGGCTTTGCTATTGTCCCCGGT
GGTGAAAGCTCGAACCAACACAACATTGTGAGGCGACAAGAGAGAGAGGA
GGGGGGAGAGCGTCAGCTGCTATATCGTGCGAGCGTTTCGCGTGTTTACG
ATTCTAAAGCATCTGATACGGGGTGTTAGTGTGTACTCGGCACGGTACGG
ATCTCCGACATCTCGGGGGGTTACGTGGATATTGTTCATATGGATGTGGT
GAACTCGATGCACGACTTTCCGCTTGGTCTCTCGCTCCTGTCTCTAATTC
GTTAAACTCTCTGTAAACACAAGGCACTTGAGTCACATCCTCTGTGTAGA
GATGCTCAAGAGCCCGCGAGCGTGATAACGAAGTGCACGTGCCGACACCC
CAAACACAGCAGTATCGTGGAGTCAGCTGACAGTCGGTAGGGAAAAAAAG
GTTCGAGAGGTAGGCACCTCTGTGTTTTGGAATACAAGGGCTGCTGTTGT
GGCGAGAACTTCCCGCGAGTGTCAAGGAGATCCAGGGAAAGGAATTTGGA
GGAAAGGGTAGCTGATGTTGCGGTAATTGCCAGCGAGCATCAAGGGTCCT
GGCTAGAGTAAGAGCTGCTGTGGCGAGAACGATGCCGGCGAGCTACAAGA
ACAAGAGATGATTTGTGCTGCTTTTGGGGTGGAATAACGGTTGACGTACA
AAAGGACAGCTGCTGCGGCGGTAATTGCCAGCGAGCGCCAAAGGTTCGAA
CAAGACATTGAATGTAAGAACGAGGCCGGCGAGCTACAAGAAAAGAATAT
ATGTTCGTGTTAGGTATGGCGGAGGCAGAGAAGAACAAATTCGAGCATAG
GATGAATGATCTACAAATGCGGTATGGTTTGGCGGAAGAAGAAAACAAGA
TGTTGGGGGGGAAGAAGGGGAAGCGGAGAAAGAAATGAGCTGCAAGAGCA
ATGGCTCCAGGAAGAACGACTGCCAGGGCAAACTGGTGGAGCTGGGCTCC
GTACACCAGCGGGTGAGCATGATGAATGGTGGCAATTGGCTTTGAAAGGT
TGCAGCAGTAGTCACAAACCGCCCAAAATCCCGACCAAATCGACAATAGC
CGCGAGCTGGCAGCGGAGAATGCGGAGTTTCCTAACAAGTGAGGGTTTGG
AGCAGACGCTTGAAGACACCCACCCCGCTAACCACGGTTCTCGTCATCAG
CTGTTCGGATCGCACATATCTGAACTGAGTTCATGATGCGGCGCTCGTTA
CGGCACAGCAACGGGCATGGGGATTTCTGCTAGAGGCGACCTGCGGCGCG
GGCATTGAAGCACCGTTGGTTGCTTGCAGCTGCGTCCCTGCGGCATGGGG
CTTGATCCACGAAGGTTTTTTGCCTACTCTGGATGCTGGGAAGACAATGC
TTGTGAGACGACTTGAAACCGTTGAGATGTGCCCGGCGAGGGCCCAAAGC
CTTTGTTCGCCAAAGTAGACGGATTCGTCAACATCATGAGTGCTGTCGGC
ATCGCAAAAATCTGAGCGGAAAGTCGGGCACATCATTGTCCGTCAGCTTT
CACACCACGAGTACGTGCTTAACGCAAGTCCATCCTGGCCGACCCCACCA
TTTCAAAAGCGAAAGTGGAAAACGCTGTTCGCACGGCATACGCTAACAAC
GTCATGATCAAGCAATTGGGCAAAGCGCAGGCGTCAACGGCGGCGGCAGT
GACACCGTCTCACGACCCACATGGGATGACCGTCGGTGGTTTTGGGTACG
GTCATAGCGGCGTTGGTTAAGTGAGGCAACAACGGCGGTGGTGGCAGCAG
CGGCTGCAGCGGCAGCAGCAGCAGCGGGTTCATCCAGAACCACCATCTGT
AGTACACCACCATCCCCTCCTAACTTCCCGATGGTGGGTACCTGGGGAGT
TCTATGACTGCTGTGGAAGCAACGCCGTTTACTCACAACAGGAGCTCCTT
TGTTAGGCTTTTATGGTAGCATGGGCACACACTCATCAACTGCAATGTAC
CGTCAATGTGAAGGTAACTGCGCTGCCTGCGGTGAGCATGGCCATCGCAT
CGGCGCCGCACGTGTTGCACAATCGTTGACCGCATGCCACAGCGCGCACA
CGTCGGTAATGGCGAAGGTCTCAACGGGAGCGGCAACGACGCGGTGCCGC
ATCAGCAGCTGAAGCGACGACGCTTAGCGGAGACAAAGGGCAGCGGGACC
GGTGACCTTGGAACTGCTCCCGCAGATTGGTTGTCGGGGGGGGACAGCCG
GAACACCCGCAACAGTACTGGCTAAGGAATCGACCGCAGGCGCTGCTCCC
CGTGTCTGCAGCAGGAGCAGGGGCATGGGGGGCAGCACCTGTGGTGGGAG
CAGGCGACCGGTGGTGGCGGTTTCCCCGCTACGGCGGCGGGGGGGGCGGC
CGGGACGCAGGCACTCGCGGCTGGGGCGACGGTATCGGTGGCGGCCGCGT
CGGCGGGAACGACGACCGGCGTCAATGGTTTCCCCGCTGCGGTGGCGGGG
GAAGCGACCGAGGCGATGACGTCTGCACCTGGAACCGCGGCTTCGGCGAC
GGCGCGAAAAACGACGGGTGTAACCGCCGGTCGGGTGAAGATCTCGAGCG
GGGTTGCTTGCCAAAGCAATGAGGGAAGAGGTTGCCGAAACGCGGAGGCG
ATTTGTGGACCAGAAACCAGCGCTGGATGTGCAGCCGGCCGAATCACTTG
CGTCGTCAGCCGGCGTGGCTTCAGCACCGGAACCAACGGTGGCGTCGGCG
ACAGGTATTGGCGGTCTCTCCGATGCCTCGGTGGGGGGAACGTCCGGGGC
GCCGTCAGCAGCTTGAACGGTGGCACTGGTGGCGTCGTCCACTGGTGGTC
CTATTGTCCCCCGCTGTGTCCATTGGGGAAGGCAGTCGAAACGCCCACAT
CAGCAGCTACACTGACACTGGCATCAGAAGCGCAAGAGGCGGAGGACGAG
TGCGATGAGGATCGCTGTTGGTTGGACGGTGGCGACGAAGACAGCGGCAG
CAGCAGTGACGGCGGCGGCGGCGGCAGGATCGCGACATTGTCCGCTGGGG
CGGAGCATCCCAGCGCCCGTTCGACCATACGCAGCAGTCCCTGCGTGGTG
CAGGACGATGGGGGTGACGCCGGTGATGGGCTGAGTACTGTTTGTATGGG
TGTGATGGACCTGACGCGCGAGTTTCCGCTTGGCCTCGCCCCATCTCTTA
CTCGTTAAACTAATGCTAGGAACTTGAATCACTCCTTTGTGCAGAAATGC
TCTCGACGAGAGTCCATGAGCGTGATAATGAAGGACACGCGCCGACACCC
CAAACAGGGGGAATCCGCGGCTGACAACAGCATATCGCTGTTTGCAGGTG
GTTCCTTCCCCGTGGGTTTAATGCGGAGTGATTTCACTTGGCTGGGAATA
TTGTCTAGCAAGTGGGCTCATCCACCGTAGTCCACGGGTGACTCCGCAAC
CTTTTAATTAGTCCCTCCGCGAGTTTGAATCTCGGCGTGTGACAGCACGA
CAACAGCCATCATGTGTTTTGACATGTACCCGAACACCCAACGGTATCGC
TCCGGCTTCAGAATTCATCAACGATTTCAAGCCATTCGATCGATGCGTCG
GCATTTGACAACTTAGCCGCGCATATCTCCATACCTTGGTCAGGCGGGGG
TGCCATCACAAAGCGTTGTGTCGCGCGGGTCCGCCTCGCGAGCGGACGGA
TCGATCGTGATTGGGGGTGTAACCGACGGAGACTGGGACGGAGAGTTGAC
CGGGTTCACCGATTTCTTTACGGTGGCCCTGGACGAAGATGGTTCGGAGC
TATGGCGGTTCCAGGTTCGTGTTCGTGCGTGCATTGGCGACTACCCCGAT
GGGAGTCTCACGATTGCTCCGAGATAAAACTCGTTATTCCGAAAACAATA
GGTAGTCACTTGCACAATGTCGTCCGGGGCGTGGTGGTGTCCAGCGGTGA
AAACGTTAGAGCTATCCGTAGGAAGCTGGTGGGACCGAGGGGTGGTCGGT
CACGGGCTGTTCAACGCAGCCATTCCTACCACTGTAAGCTGCTGCAGCAC
GTGTGAGTGATCGACCCTCCCACACCATATTTGGCCCTTGGCGGTTGACG
GACAAGTAGGAATGACTTTGGCATTGATGCACACCATAGGTTTCCTGAAG
GCGATCGTTTTTTGGGTGTTCACGACTCAACAGGACGGCAGCCTCTTGAG
TTCAAGCTCAGCATGGGGCGTGGCAGCCCTCTCGGACGGCTCTGTGGTGC
TCGCGGGAACCACAGACGGTAACTACGCCGGAACGAACGCGGGGGCACAA
GACTTTGCAGTTGTCAAGCTGACCGAAGAGGGTGTGCTTGACTGGACTTG
GCAGGTATGGTCTTTGAAAACGACACCAAACCCCTTTTGTTTGTCGTGTC
GTCGATCCGTATGTTAGCCATAGCTCTTTGTCTCTCCGCACCGCACAGTC
TGGCGCCTGTCTAACTGAGAAGCTCCGATCCGGGGGATAGCCACGATGCC
GGCGGCGCGTCATCATATTTCCCTTACGAAGCATTCCCGCGAGGGCGGTT
CCTTCCCCAGCTAAGTCTAACGGTGCCCGCACGTTCGAGGTTATACTTCT
ATGTGGCAAAGACACGCTTGAAGCGTCATATTCGGTGCGCTCACTCCCAT
GCATTGGTGTGGCTGGCTGCTGTGAACGTGTCTCATGGGTTTCTGCTTTC
GCACATGCTGTGTACGACACGAAGTGCCAAAATGGAACCAAAGATCGATC
GCACACCTTGCTTTATTGATAACTACGATCAAGAGACCGACCCCTCTGTG
TGCTACGAAGTAGAAGTACTATTTATAAAGGTCTGGAGAGCTATGGTCCG
CCTAGGACAAATTGCTCAATCATGGTTTCCAGGTACGTGACGTTTGAACG
TATCCGATTCAAGCGACGAACCAGGAACGCTAGTGATTGCCAGGACAAGG
CGCACAAAAATGTTGTGACCAACGATTGGAGGTGTTTTACGCTAAATCCA
TAAAAAATCAAATCTGGAACATGGACGTTTCAGACAGAACGTCGAATATC
TCGCGAAATGTCACTTTCTTCTACGAAATATCGGAACAAAATAAAACTTG
CAGGGTTTCAAGACTGGAATCGCTTGCCACACTCTGATTTGAATTCGAGG
GTTGGTGATGGCAGAAAAGGCAAACAAGTATACACCCTACTTTATATTAG
ATCTGTTGTTGTTTCTTTACGTTTGTTAAATTTTTTTCTCTTTTTACAAT
CGGAAGGTGGCAAATTTCGAAAACTGTCCAAATCCGGTTTGAGATTGTTT
CGGCCAACAATACACCCCCAGGAATAAACGGACAAGATTAGTTTCACGAT
ATTTTCAGCATCTCGATGCAGGGAACAACAGAACACAACAAATATTCTCC
GTAGCCAGTTGCGCTCCGAAAGGCCTGTATTTTTTTGTCTTTAGATTGTG
GAACGCCCCCACTTACCCCGACACAAGTGCACTGACGTGTAGGAGAAGTG
TTCGGACGCATTGCCTTGGACGGACAATATGTACCTGACAGTGTTCCCCT
ACCCTACGAAGAGTGGCACCCTGTCGCTGTGGGTCCGGTAGTAGCCTTTT
ACCATCATGCGTGTGTGTGGTTGATCCGGCGAGTCGCGTGGGCTGCGGTT
TACTTCTGTCGAGTGTCGGGGAACACGTGTCATCGCGGCTCACCTGACAT
GCAAACCCGCGCTGCACACGTGTCGGGGGCTGAAAATGGCATTATATGTG
CAGGATGGGACACCGTACGACGAAAGCTTCGAAGGAGTGGCGACCGGAAT
CGACGGCACCTCCATGGTTTTCGCTGGCTACACCTTCGGGACCTGGGCGG
CAGCGCAAGCCGAGGACGAGGACGACATGGACGCCGTGGGCATGTCCATG
GATGGCGACGGCACTTTGCTGTGGACGTATCAGGTATCTTGTCTGCGTAC
ACGTAGGACGTGAGTCACTGGTTGCCCGCAGGGGTCTACGCACGTGGTAG
GTGTTGCTGTAGGATCCTTCTCTCTGCCGCCTTGGTCATGGACAAGCAGA
GTGGGGACAGAGACAAATCGAAGGCTGGCAAAGACGAACCACAGTTCTCT
TCTCCATCCTGAAACAGAGAAAGAACAAATAGACCGTACACAAGTTTTAA
GTCTGTATGATCGCGATCCGAACCGACCGGCAGAAAGTATTGGATATCGC
TTCATGTCTTGCGCCCCATCCTTGCCGCTGCTGGGTTGTGGCTTTGCCAC
GCACGACCAGGACTCCCCCACCCGATGTTGGTGTATTTATGTAATCATTG
ATGTTTGATCTCTCTCTGTCGTCCATAAGGGCACGTATGCCTGGCAGCTT
GTGCCGTATAACGGCAAGTATGCGAGGGCGGGACCTTATCCTGGCCCGGG
GTTGATTTGTGGTTACCGGCGATCCTGCGTGTCATAGATTGATTTGCCGA
AGCCTGGTTGATGTTACCTGGTGCGGCGCGTGTTTCGACGAGTTTCAGCC
GTACGACATCGTGCAGGGCTACCTGCAGTTACATCTTTCACTTGCGTGTA
CGTCTGGTGTCTTGCCAACGAGCAAGTTACCTCGGCGGGCGGGCGTCGGA
AGCGGTTCGAGATCATGATGTTCGCCTTGGTTGTTCAGTTGGATGCACGC
GCGTATCTCCAAAAGCGTGCACCGTGTAACCGCGTAGAACGAGTCTCTGC
CGCAGTGTCCATGTCGTGCAAGGCAGAGGGGTACTGTGGGTATGGTTGTG
GGCCACCACACGCTTGCAGCAGTGGTGGTGCTTTCGCGCCTACTGTCCTT
GAAGGGGTCGGTCCCTCAGAGCCCCAACTCTCCGACCTTGCATCCCCGAA
CCTGATCCCCATCTGTCCACATAGGCCGGCACCACCAATCACGACAACTT
CATCGGCGTCGACGTCGGCCCCGACGGAGCCGCGCTGCTTGCGGGCTTCT
CCGCAGGGACGTGGGAGGACCCCACGGCTGATTTCTATGCTGACTTCGCC
GGGGTTTTGATCGAGACGGGCGCCGTGCCCGCCACCCCGGCGCCGGCCGA
CGACATCGTGATCACGCCATCAACTCCTTTTCCTGTCACAGGCACTTCGG
GAGATACTTCGGAAGGGTCTTGCGGCGACGGCGAGTCGTTCCTCATAACG
TCGGACGTGCTGCCCGTTGTCCAGGGGTGCTACCAGCAAACAACTTTGTC
GTTCGACGACGGGGGCCAGTACGAAGAGTACACCGTCAGTGGCCTGACCG
AGTGGGAGCACATAACCATGTTCGGGAGCTCCTCCGCCTTTGCTGATGAC
GACGGCGATGAGGTGAGTCGGACCGGCGTGTTTTCGTTGTTTCTTGGCAT
TCGTTTCTTGGGAAGACAGACGTGGTTGCGTAAGTGCGGCAGGATCCAAT
AAACCCATCATAGACGGTGCGTGCTTGCTGGGTTTGGTACCAAGTGGGTT
GCGTCGCCTCTGCAGTACCCAACTGTCCCCCTAATATTCGTGTTTTCAAG
AACTTGGGTAGGCATTTTCATACCGAGCTACTGTAGCTTCCAACGTCTCC
GTGTTCTTGCTTTCTTTGCTTTTTGTGTTCTTCAACACCAGATCATGCCG
TTCTACCTAGCATTAATCTCCGAAGAAGACGATGGGACCATCATTTATTG
CATTTCGAACGAAGACGCCGTGACTGTCCACCCTGCCGACGCCACGTGGA
CATGTGAGGACAGGCCTACCTTGCTGCAGGAGGATGGCCATATAAGTCTG
TGTACAAGTCTGTGTACGGATGCGGCTCATGTACCGCAGTATCAATCGCT
AGCAAGTTCGAGTACTTTCCTTCGTATCGTGATACTACGTGTGCGATCTC
CTTGTCTTGGAAGCCCCCCCCCCCTCCCCCCCGCCCCCGAGGCCTCACGG
CGACCCGTGCGCCAACCCTCACCACTGATGTATGTATGTAACAGGCGACC
TCGACGGCACCGGCACCTACGAAGACGTTACCGACGAGGAGGTTTCGATG
GACTGTGGGTGCACTGGCACCGCCCCCGCACCCGTTGTAACGGATAGTCC
TGTGGTCCCTCCTACCCCGACCCCCGTAGTATCGGAAGGGGAGTCGACGT
CTTCTTCTTCCGTCCCGCTTGGACTGCTTATTGGTGGCATTGTCGGCGGC
TTGGCGTTTCTGGCACTCGTCGGCATCTTTGTGGCGAGACGCCGAGCGAG
AGGTGATCAGAGCTTCGGCAACGCTCCTGCCCGCTCTAAAAATTATCCCG
CTGTTGCGGGTGGTGCTGCTGGTGATGTTGCAGGTGGTGCTGGTGCTGCT
AAGGGAGTCATCCCGCTGCCTCCCCCGCCCGCATATACAGAACCCCCTCC
GCCCATGGCAGACGCCGGGGATATCGATCTTCCACCGCCGCCAGCGTACT
CGGAACCGCCTCCACCGTTCAGTGGTTGA
back to top

Coding sequence (CDS) from alignment at chr_28:334956..345584-

>Ec-28_000280.1 ID=Ec-28_000280.1|Name=Ec-28_000280.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1950bp|location=Sequence derived from alignment at chr_28:334956..345584- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGCCGCGGGCAAGTTGGACAGCGATGGGGCTGTCCTGTGGTCCTGGCA
GGAAGGAACCACGGACGAAGATGCCTTGTCCGACGCCGCTGCGACGGACG
ACGGTGGCGTGGTGTTCGCAGGGTTTTTTAACGGCACACTCAACGGGGTC
GCCTCCGAAGGGTTGGGAGATTTCATTGCGATAAAGTTCGACTCAGACGG
AACTGAGGAATGGCGATGGCAGGACGGGACCGAGATGGACGAAGGCATCA
CAACGTGCAGCAAGACAGCAGACGGAAACGTGGTGCTGACGGGCTCGACC
CTGGGAGACTGGGTCGAGACAAACACGGGGCTATGGGCGCTTGTGGCGGT
CAAGCTAGACGTTACCGACGGGAGTGTCATCTGGCAATACCAGGCGGGGG
TGCCATCACAAAGCGTTGTGTCGCGCGGGTCCGCCTCGCGAGCGGACGGA
TCGATCGTGATTGGGGGTGTAACCGACGGAGACTGGGACGGAGAGTTGAC
CGGGTTCACCGATTTCTTTACGGTGGCCCTGGACGAAGATGGTTCGGAGC
TATGGCGGTTCCAGGACGGCAGCCTCTTGAGTTCAAGCTCAGCATGGGGC
GTGGCAGCCCTCTCGGACGGCTCTGTGGTGCTCGCGGGAACCACAGACGG
TAACTACGCCGGAACGAACGCGGGGGCACAAGACTTTGCAGTTGTCAAGC
TGACCGAAGAGGGTGTGCTTGACTGGACTTGGCAGGATGGGACACCGTAC
GACGAAAGCTTCGAAGGAGTGGCGACCGGAATCGACGGCACCTCCATGGT
TTTCGCTGGCTACACCTTCGGGACCTGGGCGGCAGCGCAAGCCGAGGACG
AGGACGACATGGACGCCGTGGGCATGTCCATGGATGGCGACGGCACTTTG
CTGTGGACGTATCAGGCCGGCACCACCAATCACGACAACTTCATCGGCGT
CGACGTCGGCCCCGACGGAGCCGCGCTGCTTGCGGGCTTCTCCGCAGGGA
CGTGGGAGGACCCCACGGCTGATTTCTATGCTGACTTCGCCGGGGTTTTG
ATCGAGACGGGCGCCGTGCCCGCCACCCCGGCGCCGGCCGACGACATCGT
GATCACGCCATCAACTCCTTTTCCTGTCACAGGCACTTCGGGAGATACTT
CGGAAGGGTCTTGCGGCGACGGCGAGTCGTTCCTCATAACGTCGGACGTG
CTGCCCGTTGTCCAGGGGTGCTACCAGCAAACAACTTTGTCGTTCGACGA
CGGGGGCCAGTACGAAGAGTACACCGTCAGTGGCCTGACCGAGTGGGAGC
ACATAACCATGTTCGGGAGCTCCTCCGCCTTTGCTGATGACGACGGCGAT
GAGATCATGCCGTTCTACCTAGCATTAATCTCCGAAGAAGACGATGGGAC
CATCATTTATTGCATTTCGAACGAAGACGCCGTGACTGTCCACCCTGCCG
ACGCCACGTGGACATGCGACCTCGACGGCACCGGCACCTACGAAGACGTT
ACCGACGAGGAGGTTTCGATGGACTGTGGGTGCACTGGCACCGCCCCCGC
ACCCGTTGTAACGGATAGTCCTGTGGTCCCTCCTACCCCGACCCCCGTAG
TATCGGAAGGGGAGTCGACGTCTTCTTCTTCCGTCCCGCTTGGACTGCTT
ATTGGTGGCATTGTCGGCGGCTTGGCGTTTCTGGCACTCGTCGGCATCTT
TGTGGCGAGACGCCGAGCGAGAGGTGATCAGAGCTTCGGCAACGCTCCTG
CCCGCTCTAAAAATTATCCCGCTGTTGCGGGTGGTGCTGCTGGTGATGTT
GCAGGTGGTGCTGGTGCTGCTAAGGGAGTCATCCCGCTGCCTCCCCCGCC
CGCATATACAGAACCCCCTCCGCCCATGGCAGACGCCGGGGATATCGATC
TTCCACCGCCGCCAGCGTACTCGGAACCGCCTCCACCGTTCAGTGGTTGA
back to top
Synonyms
The feature 'Ec-28_000280.1' has the following synonyms
Synonym
Esi0120_0055
Esi_0120_0055