Ec-28_000220.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-28_000220.1
Unique NameEc-28_000220.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length209
Homology
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BLAST of Ec-28_000220.1 vs. uniprot
Match: A0A6H5L6C7_9PHAE (GOLD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6C7_9PHAE)

HSP 1 Score: 368 bits (945), Expect = 8.150e-123
Identity = 188/205 (91.71%), Postives = 196/205 (95.61%), Query Frame = 3 
Query:  333 FRYALALVGLSIAYGIEPTPILIDVLPGETRCVGDSVRVGEDTTFTFRAAPVDGPFVDKVKVILEHPNGEEPFIAELTEKEQFHRVDKGEGGGTYRVCFHNLKTKGRSTRVELVETTLAVTKGASQVAKHLQPADELLKHAKDLAKSLSEQLRESASSEREGIDSDKVLRSRINFVALFTVVVLLSVSGWQLSLLNKFFRSKKLI 947
            FRYAL LVGLSIAYGIEPTPILIDVLPGETRCVGDSVRVGEDTTFTFRAAPVDGPF DKVKVILEHPNGEEPFIAELTE+ + HRVDKGEGGGTYRVCF N+KTKGRSTRVELVETTLAVT+GASQVAKHLQP DELLKHAK+LAKSLSEQLRE+ASSEREG+DSDKVLRSRIN VA FTV+ LLSVSGWQLSLLNKFFRSKKLI
Sbjct:    3 FRYALVLVGLSIAYGIEPTPILIDVLPGETRCVGDSVRVGEDTTFTFRAAPVDGPFSDKVKVILEHPNGEEPFIAELTEERESHRVDKGEGGGTYRVCFRNMKTKGRSTRVELVETTLAVTQGASQVAKHLQPVDELLKHAKELAKSLSEQLRENASSEREGLDSDKVLRSRINIVAAFTVLGLLSVSGWQLSLLNKFFRSKKLI 207
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BLAST of Ec-28_000220.1 vs. uniprot
Match: A0A835Z684_9STRA (Emp24/gp25L/p24 family/GOLD-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z684_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 3.440e-16
Identity = 64/194 (32.99%), Postives = 102/194 (52.58%), Query Frame = 3 
Query:  399 IDVLPGETRCVGDSVRVGEDTT--FTFRAAPVDGPFVD----KVKVILEHPNGEEPFIAELTEKEQFHRVDKGEGGGTYRVCFHNLKTKGRSTRVELVETTLAVTKGASQVAKH-----LQPADELLKHAKDLAKSLSEQLRESASSEREGIDSDKVLRSRINFVALFTVVVLLSVSGWQLSLLNKFFRSKKLI 947
            +DV PG+TRC+G+   +GEDT   F F+ AP +   +D     V V++  P+G+  F   L  ++        EG G Y +CF +      +  ++ V+ ++     +    K      LQP + LL  A+D A++++ ++  S   E E   +   +  RIN  ALF++VVLL +S WQ+  L KFFRSKKL+
Sbjct:   22 LDVQPGDTRCLGE--ELGEDTPAKFVFKQAPRNNKPLDFNSKGVYVMVTDPSGKSIFKQMLRGEQDVEFQYTSEGPGLYHICFSS-----SAHSIQRVDLSVGRHYDSESFVKSIKEEALQPLELLLSRAEDAARAINAEMDLSIQRESELKYTSVNMEWRINAFALFSIVVLLGLSAWQIVFLKKFFRSKKLL 208
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BLAST of Ec-28_000220.1 vs. uniprot
Match: W7TMZ8_9STRA (Transmembrane emp24 domain-containing protein 10 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMZ8_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 7.130e-13
Identity = 62/215 (28.84%), Postives = 105/215 (48.84%), Query Frame = 3 
Query:  306 LPVVDQMQLFRYALALVGLSIAYGIEPTPILIDVLPGETRCVGDSVRVGEDTTFTFRAAPVDGPFVDKVKVILEHPNGEEPFIAELTEKEQFHRVDKGEGGGTYRVCFHNLKTKGRSTRVELVETTLAVTKGASQVAK-HLQPADELLKHAKDLAKSLSEQLRESASSEREGIDSDKVLRSRINFVALFTVVVLLSVSGWQLSLLNKFFRSKKLI 947
            LP    + LF   LAL+ L  A       I +D+ P  TRCV D     ED+T   RA    G   D ++ ++  P+    +   LT K +  ++   +  G Y++CF N   + +   V L++  + +    +   K HLQP   L + A+     +S++L      E    ++ +    RI + ++F++V+LL+VS WQ++ L  FFR+KKL+
Sbjct:   36 LPFSAPLLLFSCQLALLSLVNA-------IQLDLQPHTTRCVADEYAPEEDSTIKVRAV---GRVQDGIRGMVSTPDNRLFWDGYLTAKIEDVKIP-ADYFGLYKICFWNGGREVQRVEVGLLDKAVQLHNAETAKTKEHLQPLQLLFRRAELTVAGVSKELDSVRQREASLRETSESTNRRIQWFSIFSIVILLAVSIWQVTFLKSFFRAKKLL 239
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BLAST of Ec-28_000220.1 vs. uniprot
Match: A0A7S2V9A1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V9A1_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.660e-6
Identity = 50/200 (25.00%), Postives = 85/200 (42.50%), Query Frame = 3 
Query:  396 LIDVLPGETRCVGDSVRVGEDTTFTFRAAPV--DGPFVDKVKVILEHPNGEEPFIAELTEKEQFHRV-----------DKGEGGGTYRVCFHNLKTKGR---STRVELVETTLAVTKGASQVAKHLQPADELLKHAKDLAKSLSEQLRESASSEREGIDSDKVLRSRINFVALFTVVVLLSVSGWQLSLLNKFFRSKKLI 947
            ++D+ PGE RC+G  V     TTF+    P   D   + K +   E P   +  +    +K  F R             K    G + +CF N     R   S  VE+ +T +A      ++  HL P +   K  +   KS++ ++    + E     + +    RI + +  ++ +LL+V   Q+  L +FF SKKL+
Sbjct:    1 MLDLEPGEERCIGQEVGDNAATTFSMHVVPSREDEKGLSKNEA-YEKPARVQATVRNPWKKRLFRRELLFSPATTVYEPKKVDAGLHTICFQNYNDSPRRRISLEVEVADTKVA------RIKDHLAPVERSFKRTETALKSINNEMDYMRAREARMAATSESTARRIQWFSFLSIFILLAVCAVQIFYLKRFFLSKKLL 193
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BLAST of Ec-28_000220.1 vs. uniprot
Match: A0A4D9D304_9STRA (GOLD domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D304_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 2.930e-6
Identity = 34/114 (29.82%), Postives = 62/114 (54.39%), Query Frame = 3 
Query:  609 GTYRVCFHNLKTKGRSTRVELVETTLAVTKGASQVAK-HLQPADELLKHAKDLAKSLSEQLRESASSEREGIDSDKVLRSRINFVALFTVVVLLSVSGWQLSLLNKFFRSKKLI 947
            G Y++CF N   + +   V L++  + +    +   K HLQP   L + A+     +S++L      E    ++ +    RI + ++F++V+LL+VS WQ++ L  FFR+KKL+
Sbjct:   30 GLYKICFWNGGREVQRVEVGLLDKAVQLQNAETAKTKEHLQPLQLLFRRAELTVAGVSKELDSVRQREASLRETSESTDRRIQWFSIFSIVILLAVSIWQVTFLKSFFRAKKLL 143
The following BLAST results are available for this feature:
BLAST of Ec-28_000220.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5L6C7_9PHAE8.150e-12391.71GOLD domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835Z684_9STRA3.440e-1632.99Emp24/gp25L/p24 family/GOLD-domain-containing prot... [more]
W7TMZ8_9STRA7.130e-1328.84Transmembrane emp24 domain-containing protein 10 n... [more]
A0A7S2V9A1_9STRA1.660e-625.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A4D9D304_9STRA2.930e-629.82GOLD domain-containing protein n=1 Tax=Nannochloro... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:280686..285956 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score66.2
Seed ortholog evalue2e-08
Seed eggNOG ortholog653948.CCA15078
Preferred nameTMED10
Length1661
KEGG koko:K20347,ko:K20352,ko:K20878
KEGG TC1.I.1.1.3,9.B.188,9.B.188.1.2
Hectar predicted targeting categorysignal peptide
Gene idEc-28_000220.1
GOsGO:0000139,GO:0000149,GO:0000322,GO:0000323,GO:0000324,GO:0001655,GO:0001822,GO:0002790,GO:0003002,GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005783,GO:0005789,GO:0005793,GO:0005794,GO:0005798,GO:0005801,GO:0005886,GO:0006810,GO:0006886,GO:0006887,GO:0006888,GO:0006890,GO:0006900,GO:0006901,GO:0006903,GO:0006996,GO:0007030,GO:0007154,GO:0007267,GO:0007275,GO:0007389,GO:0008104,GO:0008150,GO:0008565,GO:0009306,GO:0009953,GO:0009987,GO:0010033,GO:0010243,GO:0010256,GO:0012505,GO:0012506,GO:0012507,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016192,GO:0019222,GO:0019905,GO:0022607,GO:0023052,GO:0023061,GO:0030133,GO:0030134,GO:0030135,GO:0030136,GO:0030137,GO:0030140,GO:0030141,GO:0030658,GO:0030659,GO:0030660,GO:0030662,GO:0030667,GO:0031090,GO:0031224,GO:0031323,GO:0031410,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0032940,GO:0032991,GO:0033036,GO:0033116,GO:0034248,GO:0034613,GO:0034622,GO:0035459,GO:0035964,GO:0042175,GO:0042221,GO:0042588,GO:0042589,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043279,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044433,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0044877,GO:0045055,GO:0045184,GO:0046662,GO:0046903,GO:0046907,GO:0048042,GO:0048193,GO:0048194,GO:0048199,GO:0048200,GO:0048205,GO:0048207,GO:0048208,GO:0048513,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050795,GO:0050896,GO:0051171,GO:0051179,GO:0051234,GO:0051239,GO:0051246,GO:0051259,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0060255,GO:0061024,GO:0061355,GO:0065003,GO:0065007,GO:0070727,GO:0070765,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072001,GO:0080090,GO:0090114,GO:0097708,GO:0098588,GO:0098791,GO:0098796,GO:0098797,GO:0098805,GO:0098827,GO:0099503,GO:0198738,GO:1901698,GO:1902003,GO:1902991,GO:2000241
EggNOG free text desc.protein transport
EggNOG OGsKOG1691@1,KOG1691@2759
EC2.7.11.1
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01001,ko02000,ko03036,ko04131
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_000220Ec-28_000220Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_28 280686..285956 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000220.1Ec-28_000220.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_28 281396..285632 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000220.1.6Ec-28_000220.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 280686..281414 -
Ec-28_000220.1.5Ec-28_000220.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 281833..282005 -
Ec-28_000220.1.4Ec-28_000220.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 283231..283320 -
Ec-28_000220.1.3Ec-28_000220.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 283658..283835 -
Ec-28_000220.1.2Ec-28_000220.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 284241..284306 -
Ec-28_000220.1.1Ec-28_000220.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 285532..285956 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0002203UTR:Ec-28_000220.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_28 280686..281395 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000220.1CDS:Ec-28_000220.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_28 281396..281414 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0002205UTR:Ec-28_000220.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_28 285633..285956 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-28_000220.1 ID=Ec-28_000220.1|Name=Ec-28_000220.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=209bp
MQLFRYALALVGLSIAYGIEPTPILIDVLPGETRCVGDSVRVGEDTTFTF
RAAPVDGPFVDKVKVILEHPNGEEPFIAELTEKEQFHRVDKGEGGGTYRV
CFHNLKTKGRSTRVELVETTLAVTKGASQVAKHLQPADELLKHAKDLAKS
LSEQLRESASSEREGIDSDKVLRSRINFVALFTVVVLLSVSGWQLSLLNK
FFRSKKLI*
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spliced messenger RNA

>Ec-28_000220.1 ID=Ec-28_000220.1|Name=Ec-28_000220.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1661bp|location=Sequence derived from alignment at chr_28:280686..285956- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
CGGCACCAACAGGGGGCCCCCGGGCGTTTGTCCCAATTTGTCCCTGTCGT
CCATGCCCAGCAGCCCAGGTATTACGTTGTGTGTGCGTGTCTGGTCTCTT
TCGTACTCGCCAATACATCCAGTGAGGTGTAGCTCACCCCGTAGCCTACC
GCCACCCCGTTTTTCCAGCTTTATTGCTATCTAGGAGCTGCCTAGTTCCA
CAGCAGTCAACCCCTGTCACAGACAGCAGGGCGGAGAGACGAGGTGGTGG
AGCGAGACGGAACAAGCCTTGGCGAGCTGGCGGCTGGACACAGCCTCAGA
GCAGACTGCCAGTGGTAGACCAAGATGCAACTCTTCCGTTACGCTCTGGC
GTTGGTTGGACTATCCATTGCCTACGGGATAGAGCCCACTCCTATCCTGA
TTGACGTATTACCGGGAGAGACAAGATGCGTGGGGGACAGCGTGCGAGTC
GGCGAGGACACCACGTTCACTTTCAGGGCGGCGCCAGTAGACGGCCCTTT
CGTAGACAAGGTCAAGGTGATCTTGGAGCACCCCAACGGAGAAGAGCCGT
TCATCGCGGAGTTGACGGAGAAGGAGCAGTTCCATCGTGTGGATAAGGGG
GAAGGGGGGGGCACCTACAGGGTTTGTTTCCACAACTTGAAAACCAAGGG
GAGAAGTACGAGGGTGGAGCTGGTGGAGACGACGTTGGCGGTGACGAAAG
GTGCTTCTCAGGTCGCCAAGCACCTGCAGCCAGCGGACGAGCTCCTTAAG
CATGCCAAGGACCTGGCAAAAAGCCTGAGCGAGCAGCTGCGGGAGAGCGC
GTCGAGCGAGAGAGAAGGCATCGATTCGGACAAGGTGCTCCGTTCTCGAA
TCAACTTCGTGGCCCTCTTCACCGTCGTGGTGCTCCTTTCGGTCAGCGGC
TGGCAGCTGTCCCTGCTCAACAAATTCTTTCGATCGAAAAAGCTCATCTG
ACGGGGTGTTCGAATCGTGTACCCTAAGCGGGGGCTCGGCGCTGGGTCGA
GACCTACTTGGAGCTGTCACGTGGTGCTCCTCTGGGACCGGTGGTTTAAT
TAACACGTGGCGCTGTCTCGTTGTCATTCGGACAGGGGCTGACGCATTCG
TCTGTCACTCAAACCGTTCTCTGGAGCGTCTTTGCTTCGAAGTTTGCCTG
CACGTTTGAGTGCGGGGGCTGCGGGAGGCTTTGAGCAAGAGTAAGATTCC
TTTAGCACAACTCAAGCACGAGACGTTGTTGGGAAAAGTGGCGCTGTTCT
TTCCCACGTCGTCGAGAGAGCATGAAACGGTTGCCTGGAGTAAAGCCTTG
CAGGTGCCACACCCACTGTTTTGTTTTGTTTTTCGCTTTTCTTGAATTCG
CGCCCTGTGTGCTTGTTGTTGCACGGTATCATGCTCTCAAACGCATGCTG
CAACCGCTCGCTGACGGCTCTCGGCCATTCCCTGGCCGCCACAAACATCC
GGTGTCTTGACGCTAAGCCCTTGACCTTGTGGTGCCCTCTCTTGGCGCAG
CAGCGGTCCCGATTTAAAAGCGCAAAACCGCCCCAGAGACAAAAGTAGCC
CTTTCTTCTCTCGCTTGGGGTAAGTCCGTCTTCCTTGGATTGGTTGATGC
CTGTTGGTTTTGTATCGTTTTGTCGTGCAGTGTATCGAGTTGTTCGCAGT
TTAGAGGGGGG
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protein sequence of Ec-28_000220.1

>Ec-28_000220.1 ID=Ec-28_000220.1|Name=Ec-28_000220.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=209bp
MQLFRYALALVGLSIAYGIEPTPILIDVLPGETRCVGDSVRVGEDTTFTF
RAAPVDGPFVDKVKVILEHPNGEEPFIAELTEKEQFHRVDKGEGGGTYRV
CFHNLKTKGRSTRVELVETTLAVTKGASQVAKHLQPADELLKHAKDLAKS
LSEQLRESASSEREGIDSDKVLRSRINFVALFTVVVLLSVSGWQLSLLNK
FFRSKKLI*
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mRNA from alignment at chr_28:280686..285956-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-28_000220.1 ID=Ec-28_000220.1|Name=Ec-28_000220.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=5271bp|location=Sequence derived from alignment at chr_28:280686..285956- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CGGCACCAACAGGGGGCCCCCGGGCGTTTGTCCCAATTTGTCCCTGTCGT
CCATGCCCAGCAGCCCAGGTATTACGTTGTGTGTGCGTGTCTGGTCTCTT
TCGTACTCGCCAATACATCCAGTGAGGTGTAGCTCACCCCGTAGCCTACC
GCCACCCCGTTTTTCCAGCTTTATTGCTATCTAGGAGCTGCCTAGTTCCA
CAGCAGTCAACCCCTGTCACAGACAGCAGGGCGGAGAGACGAGGTGGTGG
AGCGAGACGGAACAAGCCTTGGCGAGCTGGCGGCTGGACACAGCCTCAGA
GCAGACTGCCAGTGGTAGACCAAGATGCAACTCTTCCGTTACGCTCTGGC
GTTGGTTGGACTATCCATTGCCTACGGGATAGAGCCCACTCCTATCCTGA
TTGACGTATTACCGGGAGAGACAAGGTACGGAACGTTCGGTACTGCTGCT
GTAGTTACCCCGCGTGCCTGGATACCTGCTCTGCTGCGGCCTGTTTTGGA
CACTCTTGCCCGACACGTATGTTGCATCCGTGTGCTAGGAGAAATCTCTG
AAGCTAGAGTATGCACAGCAGAACATCGAATAGGTTACTGAAGTTTTATG
GATGGCGACGATTATTTTGATCCCACACCGACACCACAGCAATGCACGAC
ACACGACACCGTGATCCCGCTTGACTGTTGTAACAAGGCAAGCCCCTTCC
GCCTGTCCCTCGACAGCAGTTCGGTGCTGCAGCTATGTTTGCACAGCAGC
ACATACGTAAAATCACATGGACTTTGAAATCTTGTAGATGAAGTTATTTA
TTTGGTCCAATAGACACCTGCCACAGCAATGCACGACCCATGCTTCACTA
CGTACTGCTGTACCCACCGCCATGTTCCTGGCGCCGGTATCGCCAGCCCC
GCTCAACAAAAGTTCGTTCTCGGGGGGGAGGGCGAACAACCTCACATGTA
CCCTTTCGCAACTCCGTGACATGCAACATCAGCGAATTCCACCTGGTATC
CGTCTGTCCGTGTCACGACAGCCATACTGCAGTATTTCGTGGAGCCTCGA
CCGCATGCGAGCAGTGTGCCAGGGATGAGGGAGGTGGGGGAGGGGAGTCG
GTATTCAACGTAACGCATGTACTGGTCGTCCATGTCCGCGTTCAGATGCG
TTTATTAGGAAAAATAATCTCAAGATGTTCTGCACACAAGAACGATTAAT
TCTCAACGCAACATTCCATGGAGACTTAAGAGTAATAGTAGCACATCGCT
GGTCGTGTGCAAATTAACTGTGTATGCACTGAGTTCTATTCTGCTCATCA
TGTTCAGATGCGCGAAATGGTGCCGACATGTTGCGTGAACTTCGCAATGT
TTCCAACGCCGCCGTCGTAGCATATGGTAGTGCGCTGTCCTTTCCCCCCC
TAGCGGACAACCTCTCATGCGGGGGGACGATTTGGCGCTTCGCTTGCCGC
TGGGTTGACGGTTTTGTGATATTGCATGAAATCACGCAGGTTTCCCTCTG
CCGTGTGTCTCTGTCCTTTGTGTATGTTTTTGATTGGCATCGACCGCGCC
AACCTGCTGACCAATGAAAAGGCCGCCAGTCTTCGAACAGGACATTAACA
ACGTGAACACCCTGCTGTTCTTTGTTTGTACATGTGTCTTTTTTTGTCAG
ATGCGTGGGGGACAGCGTGCGAGTCGGCGAGGACACCACGTTCACTTTCA
GGGCGGCGCCAGTAGAGTGAGTCATACTGCAGCGTCACGTCCGTCGTTGC
AGTACCGAAACAGCAGTCTTGTTATCACCTTGCTGGCCCCTTCCCCCCTG
TGTTGTAGACACTATCTTTGTTGCCATGTGCTGGCGTTTTATGTGTGTGA
GTGCCCCTACAGTTCTTCTCAACTGCTGTTCGAGACCTACACCCCCGCTA
CTGACCCGCTTGTTTTCGTCTCGAGTCTTCCAGCAATGTTTCCTTTGGAC
CACGTGTGTTGTGTTTTTTCCCTACCGCTGCGGCGGAACTCGAAACTTAT
CGTCTTTTGTTCGATTCCATCTCCGCGAGAAACGCGCAAGCAGATTGTTC
TCCTTGTCGTCCCGGTGGTCTGAATATTTATATCTTGCCATTTTGGAATC
TGCTCTCTCTTGTGTGTGCAGCGGCCCTTTCGTAGACAAGGTCAAGGTGA
TCTTGGAGCACCCCAACGGAGAAGAGCCGTTCATCGCGGAGTTGACGGAG
AAGGAGCAGTTCCATCGTGTGGATAAGGGGGAAGGGGGGGGCACCTACAG
GGTTTGTTTCCACAACTTGAAAACCAAGGGGAGAAGTACGAGGGTGGAGG
TGAGGGGGGCGGGGGAGACGGACAGACAGACAGACAGACAGAGAGGGATG
GGCGCTTTCGCACGGCCACTTGTTGGCCGTTTCGGCGTTTTGAACGCTTG
GTCTTGATCCTGGCTTTTAGCCGATGTGGTGATTGGCCGTGACGTAGTAG
ACGACGTTCGTTGCCTGTTTAGGTGGTGGTAAAGTTCATGGTTGTTCCAT
CCCCTTCAACTGCTGTGGTTATATCCCGTGGTTATGTCCCGAACGATTAG
TCTTTCTGTGTTTTTTACGCTATGTTTTCTTTACAAAATTCGTCTTCACT
TTTGGCCGTGGTTACGATGCAACGACTCACTTTCAGCTGGTGGAGACGAC
GTTGGCGGTGACGAAAGGTGCTTCTCAGGTCGCCAAGCACCTGCAGCCAG
CGGACGAGCTCCTTAAGCATGCCAAGGTGAGCTGGCTGGCTTTCTTGGCC
AGATCATTCTCGGGTGGGGGGCGGGGGTGGGGGGCGGGGGTGTACTCATT
GTCGTGCATGCCGTAGTCGTTAGACCATTGACCTCGCATCCCTACAAAGC
CGGGACGGAGCACGCCGGGTTCGCACCGGACCAGGCTCTCACATCACCAA
GCGCGAAGCGCCGTGAGGTATTCGGTGAGTCGCATGAAGGGTGCGCTGCA
TCCTGCTAAGGGTGTTCGGCATCTTGTGCTTACTTGTGCTTACTTCCTTG
CGTACGAATGACAGCTGCGTATGACTTATTTATTTTCTGGTGCTATCACT
TTCGGAGACAGTTATAAGCACTGTGTAACTGCCTCGAGGATGCTTGACCA
TTTTAACACAACGTGGTGCGATCATCCCCCTTTGCGCGGAGTGAGGGTTC
TCCACCCCGCACAACATGATCTACTCAACCATCATTCATGGTTACCGCCA
AAAAAAAAAAACGAGGTAAAAAAAAAAACGGTAACCTGGTTGCCGAGTTC
ACGAAGTGAATTGGCTTGTTTTACAACGTCGTTGCCAAGCGACGAAAACC
CAACCTCGATGGCAAAACACCAGCGGGGGGGAAGAGGGCATTTTTTGCAC
CCGACCTGACCACCACACCCTATCCATCCTATATAGTCTATATAGTCTCA
TCAAGGGGACTGTCGGCGATTGAGGCTGCTAGAGTTGATCCGGGTCCGCC
CTTTGTCTTATACCTGTCTCGCGGGACCGTTTGCATAGTCCAGTAGCAGG
ACTGTGTGCGTTTTGAAGGGCCTCGCTTGGAAAGCTTTCCCTCTACCGCG
CTACAAAGACTGTTATTTACCGCACGAGGAGGGGCAAGACTGCTGATCCC
TTCTCATTGAACGATTGAAGGCAAAGCACCGCAGGAGGAATGCGGGGGAC
AAAAGAAGCAAACCCAGTGCTTGTCTTCTTCCTGTGTGACCCCGGCTGGT
GCGTCAAACATATGCGGAAAGGTGTAGACCGGAGCAGATGGGACGAAAAC
ACAAAACGAACACGCACTGCCAATGAGTCTTGAACGGCGCTCTGGTTCCT
GCAGTGGGCGTCTTTGCAACGAGGGACAATTAGCCCCTTGTTTTTGTTCA
CCTGCCTTGCCAACATTTGTTTTTTGGCTTTACTACCCTGTCGCGCTTGA
CTGCTACCGGTTTCACCGTCGGCGTCGGTTCTGCTTTGCCCCCCCCCGCA
GGACCTGGCAAAAAGCCTGAGCGAGCAGCTGCGGGAGAGCGCGTCGAGCG
AGAGAGAAGGCATCGATTCGGACAAGGTGCTCCGTTCTCGAATCAACTTC
GTGGCCCTCTTCACCGTCGTGGTGCTCCTTTCGGTCAGCGGCTGGCAGCT
GTCCCTGCTCAACAAATTCTTTCGGTGAGAGGAGGGTGGTTTGGAAGGAG
GATCGTTTGTTTACCCGCGTGTTTCTTTTCACCAAGAATATAAACGTACA
TGTATGGCGTTGATATTGTTACCATTAATTAAACACGAACAGGTTGGCAG
TATCTCAGACATCAGTTAAGGCCCGGAAGTATGTTTCGTTGATTTTCACG
GCCTTGCTCAAACAGATTCCCCTGGCGAGGTAGAGCGAGGATTGTCACGT
TTCTACGTGTAGTGTCGGCCTGTGAAGACGCGCACGTTCTTGTCGTTTCT
CTTATGTCGCTCTTCGCATGTAGTGAAGTGCGCCTCGTGCTTGACAGGCA
GCACCAAGCGCTGGCACGGCGCATGTCGCGACGCGTCTCCAAACAAAACT
CGATCGCCAAACCACCCCCGTCGTGCTTGTCTCGCTCTCCAGATCGAAAA
AGCTCATCTGACGGGGTGTTCGAATCGTGTACCCTAAGCGGGGGCTCGGC
GCTGGGTCGAGACCTACTTGGAGCTGTCACGTGGTGCTCCTCTGGGACCG
GTGGTTTAATTAACACGTGGCGCTGTCTCGTTGTCATTCGGACAGGGGCT
GACGCATTCGTCTGTCACTCAAACCGTTCTCTGGAGCGTCTTTGCTTCGA
AGTTTGCCTGCACGTTTGAGTGCGGGGGCTGCGGGAGGCTTTGAGCAAGA
GTAAGATTCCTTTAGCACAACTCAAGCACGAGACGTTGTTGGGAAAAGTG
GCGCTGTTCTTTCCCACGTCGTCGAGAGAGCATGAAACGGTTGCCTGGAG
TAAAGCCTTGCAGGTGCCACACCCACTGTTTTGTTTTGTTTTTCGCTTTT
CTTGAATTCGCGCCCTGTGTGCTTGTTGTTGCACGGTATCATGCTCTCAA
ACGCATGCTGCAACCGCTCGCTGACGGCTCTCGGCCATTCCCTGGCCGCC
ACAAACATCCGGTGTCTTGACGCTAAGCCCTTGACCTTGTGGTGCCCTCT
CTTGGCGCAGCAGCGGTCCCGATTTAAAAGCGCAAAACCGCCCCAGAGAC
AAAAGTAGCCCTTTCTTCTCTCGCTTGGGGTAAGTCCGTCTTCCTTGGAT
TGGTTGATGCCTGTTGGTTTTGTATCGTTTTGTCGTGCAGTGTATCGAGT
TGTTCGCAGTTTAGAGGGGGG
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Coding sequence (CDS) from alignment at chr_28:280686..285956-

>Ec-28_000220.1 ID=Ec-28_000220.1|Name=Ec-28_000220.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=627bp|location=Sequence derived from alignment at chr_28:280686..285956- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCAACTCTTCCGTTACGCTCTGGCGTTGGTTGGACTATCCATTGCCTA
CGGGATAGAGCCCACTCCTATCCTGATTGACGTATTACCGGGAGAGACAA
GATGCGTGGGGGACAGCGTGCGAGTCGGCGAGGACACCACGTTCACTTTC
AGGGCGGCGCCAGTAGACGGCCCTTTCGTAGACAAGGTCAAGGTGATCTT
GGAGCACCCCAACGGAGAAGAGCCGTTCATCGCGGAGTTGACGGAGAAGG
AGCAGTTCCATCGTGTGGATAAGGGGGAAGGGGGGGGCACCTACAGGGTT
TGTTTCCACAACTTGAAAACCAAGGGGAGAAGTACGAGGGTGGAGCTGGT
GGAGACGACGTTGGCGGTGACGAAAGGTGCTTCTCAGGTCGCCAAGCACC
TGCAGCCAGCGGACGAGCTCCTTAAGCATGCCAAGGACCTGGCAAAAAGC
CTGAGCGAGCAGCTGCGGGAGAGCGCGTCGAGCGAGAGAGAAGGCATCGA
TTCGGACAAGGTGCTCCGTTCTCGAATCAACTTCGTGGCCCTCTTCACCG
TCGTGGTGCTCCTTTCGGTCAGCGGCTGGCAGCTGTCCCTGCTCAACAAA
TTCTTTCGATCGAAAAAGCTCATCTGA
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Synonyms
The feature 'Ec-28_000220.1' has the following synonyms
Synonym
Esi0120_0045
Esi_0120_0045