Ec-28_000150.2 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-28_000150.2
Unique NameEc-28_000150.2
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length188
Homology
[Close]
BLAST of Ec-28_000150.2 vs. uniprot
Match: D7FIG2_ECTSI (EDR2_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIG2_ECTSI)

HSP 1 Score: 290 bits (741), Expect = 4.800e-85
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 1 
Query:  739 SYADIPVSTFGGDECAMMDTAPPPPYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGIVLQANSAQELPEALLGAVRLNGFGVEDPDLQTKLYQ 1161
            SYADIPVSTFGGDECAMMDTAPPPPYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGIVLQANSAQELPEALLGAVRLNGFGVEDPDLQTKLYQ
Sbjct:  330 SYADIPVSTFGGDECAMMDTAPPPPYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGIVLQANSAQELPEALLGAVRLNGFGVEDPDLQTKLYQ 470
[Close]
BLAST of Ec-28_000150.2 vs. uniprot
Match: A0A6H5K9Q7_9PHAE (EDR2_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Q7_9PHAE)

HSP 1 Score: 280 bits (717), Expect = 1.860e-79
Identity = 136/140 (97.14%), Postives = 138/140 (98.57%), Query Frame = 1 
Query:  739 SYADIPVSTFGGDECAMMDTAPPPPYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGIVLQANSAQELPEALLGAVRLNGFGVEDPDLQTKLY 1158
            SYADIPVSTFGGDEC+MMDTAPPPPYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLC RCRGLSRKIDVELGIVLQANSA ELPEALLGAVRL+GFGVEDPDLQTKLY
Sbjct:  523 SYADIPVSTFGGDECSMMDTAPPPPYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCSRCRGLSRKIDVELGIVLQANSAHELPEALLGAVRLSGFGVEDPDLQTKLY 662
[Close]
BLAST of Ec-28_000150.2 vs. uniprot
Match: D7FIG3_ECTSI (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIG3_ECTSI)

HSP 1 Score: 196 bits (498), Expect = 1.310e-49
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = -2 
Query: 2405 SFSGIIDHIFVSTGEKDSGLAISGVLAFPPGAHLTEGRETTSSGEDLEQSGPEPTPDRQEEHSPTDPPAWGEFGPIPNKLWGSDHLALGVELVLL 2689
            SFSGIIDHIFVSTGEKDSGLAISGVLAFPPGAHLTEGRETTSSGEDLEQSGPEPTPDRQEEHSPTDPPAWGEFGPIPNKLWGSDHLALGVELVLL
Sbjct:  530 SFSGIIDHIFVSTGEKDSGLAISGVLAFPPGAHLTEGRETTSSGEDLEQSGPEPTPDRQEEHSPTDPPAWGEFGPIPNKLWGSDHLALGVELVLL 624
[Close]
BLAST of Ec-28_000150.2 vs. uniprot
Match: A0A835YT80_9STRA (EDR2_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT80_9STRA)

HSP 1 Score: 130 bits (327), Expect = 2.670e-31
Identity = 64/121 (52.89%), Postives = 82/121 (67.77%), Query Frame = 1 
Query:  805 PPPYSDE----------RNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGIVLQANSAQELPEALLGAVRLNGFGVEDP 1137
            PPP SD            N+RFKLIP+++ GPW+VR+AVG+ P LLGTK+T RY+RGE YVET+++ GSS  A  + G CRG S +IDV+LG+VLQ   A  LPE LLG V+     V+DP
Sbjct:   36 PPPASDVSGGIRHSYAFHNSRFKLIPQIVDGPWVVRRAVGAVPCLLGTKVTTRYFRGEHYVETNVEVGSSVVAQRIIGCCRGYSGRIDVQLGVVLQGEEADTLPEELLGTVQFRWLQVDDP 156
[Close]
BLAST of Ec-28_000150.2 vs. uniprot
Match: A0A835ZES7_9STRA (EDR2_C domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZES7_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.230e-27
Identity = 57/99 (57.58%), Postives = 69/99 (69.70%), Query Frame = 1 
Query:  820 DERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGIVLQANSAQELPEALLGAVRLN 1116
            D RN RFKLIP ++ GP++VR AVG+ P LLG K+T RYYRG  YVETD+D  SS  AA +   CRG S  + V+LGIVL+  +  ELPE  LG VRLN
Sbjct:    2 DFRNERFKLIPSIVEGPFLVRGAVGNKPALLGRKLTQRYYRGAHYVETDVDVASSSVAAHIVSMCRGASNGLSVDLGIVLEGRARAELPERCLGVVRLN 100
[Close]
BLAST of Ec-28_000150.2 vs. uniprot
Match: A0A7S2CMY1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMY1_9STRA)

HSP 1 Score: 120 bits (300), Expect = 8.710e-25
Identity = 67/154 (43.51%), Postives = 89/154 (57.79%), Query Frame = 1 
Query:  676 VDLDSRPPPTCSASAVLAFGRSYADIPVSTFGGDECAMMDTAPPPPYSDE--RNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGIVLQANSAQELPEALLGAVRLNGFGVE 1131
             DL  + P   +   +  F + Y DIP++T    E    DT     Y  E  RN RFKLIP +  GP++V++AVG+ P LLG K+T RY+RGE YVETD+  GSS  A  + G CRG  + + VE+GIVL+  S  ELPE L+G  R     +E
Sbjct:  326 TDLAQQDPSADTQKFLDLFQKYYEDIPITT----EPPASDTPDAGVYPLEHLRNQRFKLIPAITEGPFLVKQAVGAKPALLGQKLTQRYFRGEHYVETDVHVGSSAIANQVVGLCRGYCKALTVEIGIVLEGRSEAELPEKLIGVGRFKKIDIE 475
[Close]
BLAST of Ec-28_000150.2 vs. uniprot
Match: D7G1Z5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Z5_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 1.080e-23
Identity = 69/171 (40.35%), Postives = 94/171 (54.97%), Query Frame = 1 
Query:  667 SGAVDLDSRPPPTCSASAVLAFGRSYADIPVSTFGGDECAMMDTAPPP----PYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGIVLQANSAQELPEALLGAVRLNGFGVEDPDLQTKLYQ*P 1167
            +G   L+    P  +  A  A   + +    S  GG   A  D    P    P  D RN RFKLIP V+ GP++VRKAVG+ P LLG K++ RY+RG  YVETD+D GSS  A  +   CRG ++ + VELGI L+    +ELPE ++G +RL      D D+   L++ P
Sbjct:  467 AGVAGLEGGNGPPAAEGAAGAGAEALSTGAASRGGGLGGAPADRNSDPAGLLPVDDFRNQRFKLIPSVVSGPFIVRKAVGNKPALLGRKVSQRYFRGPGYVETDVDVGSSMIAEKIVSLCRGYAKALTVELGICLEGRCDEELPETVMGVIRLVNV---DIDMAEPLHRSP 634
[Close]
BLAST of Ec-28_000150.2 vs. uniprot
Match: A0A6H5K6Y7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6Y7_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 2.240e-22
Identity = 52/58 (89.66%), Postives = 54/58 (93.10%), Query Frame = -3 
Query:  484 GGGVLIVVHAVVV*PLTSHPYKAGTEHAGFSPDQALTSPSAKHREVFGESHEG*AASC 657
            GGGVLIVVHAVVV PLTSHPY+AGTEHAGFS DQALTSPSAK RE+FGESHEG AASC
Sbjct:  183 GGGVLIVVHAVVVRPLTSHPYEAGTEHAGFSADQALTSPSAKRREIFGESHEGCAASC 240
[Close]
BLAST of Ec-28_000150.2 vs. uniprot
Match: A0A2P4X7C6_9STRA (EDR2_C domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X7C6_9STRA)

HSP 1 Score: 103 bits (258), Expect = 4.380e-22
Identity = 49/102 (48.04%), Postives = 67/102 (65.69%), Query Frame = 1 
Query:  811 PYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGIVLQANSAQELPEALLGAVRLN 1116
            P  + R  R KLIPRV+ G W +R+ VG+TP +LGTKI  +YY+G+ Y+E D D GSS  A  +     G SR + ++L  V++A SA ELPE +LG VRL+
Sbjct:   39 PNDEFRTQRIKLIPRVVQGTWPIREGVGTTPAILGTKIYQKYYQGKNYLEADYDIGSSTVATGILKLLLGYSRDLIIDLAFVIEAQSAMELPERVLGTVRLD 140
[Close]
BLAST of Ec-28_000150.2 vs. uniprot
Match: A0A2P4XSH2_9STRA (EDR2_C domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XSH2_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.930e-21
Identity = 56/142 (39.44%), Postives = 82/142 (57.75%), Query Frame = 1 
Query:  694 PPPTCSASAVLAFGRSYADIPVSTFGGDECAMMDTAPPPPYSDE-RNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGIVLQANSAQELPEALLGAVRLN 1116
            P P C +  +       +++  ++   D C  +   P    +DE R  R KLIPRV+ G W +R+ VG+TP +LGTKI  +YY+G+ Y+E D D GSS  A  +     G SR + ++L  V++A SA ELPE +LG VRL+
Sbjct:   59 PGPPCHSLVLYFTPEDPSELKKNSVFADLCHEVLRGP----NDEFRTQRIKLIPRVVQGTWPIREGVGTTPAILGTKIYQKYYQGKNYLEADYDIGSSTVATGILKLLLGYSRDLIIDLAFVIEAQSAMELPERVLGTVRLD 196
The following BLAST results are available for this feature:
BLAST of Ec-28_000150.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIG2_ECTSI4.800e-85100.00EDR2_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5K9Q7_9PHAE1.860e-7997.14EDR2_C domain-containing protein n=1 Tax=Ectocarpu... [more]
D7FIG3_ECTSI1.310e-49100.00Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A835YT80_9STRA2.670e-3152.89EDR2_C domain-containing protein n=1 Tax=Tribonema... [more]
A0A835ZES7_9STRA1.230e-2757.58EDR2_C domain-containing protein (Fragment) n=1 Ta... [more]
A0A7S2CMY1_9STRA8.710e-2543.51Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
D7G1Z5_ECTSI1.080e-2340.35Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K6Y7_9PHAE2.240e-2289.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2P4X7C6_9STRA4.380e-2248.04EDR2_C domain-containing protein n=1 Tax=Phytophth... [more]
A0A2P4XSH2_9STRA1.930e-2139.44EDR2_C domain-containing protein n=1 Tax=Phytophth... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:208059..211871 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score290.0
Seed ortholog evalue7.7e-76
Seed eggNOG ortholog2880.D7FIG2
Length2692
Hectar predicted targeting categoryother localisation
Gene idEc-28_000150.2
EggNOG free text desc.Protein of unknown function (DUF1336)
EggNOG OGs28KK0@1,2QT1F@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_000150Ec-28_000150Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_28 201391..211871 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000150.2Ec-28_000150.2Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_28 208660..210344 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000150.2.1Ec-28_000150.2.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 208059..208991 +
Ec-28_000150.2.2Ec-28_000150.2.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 209463..209592 +
Ec-28_000150.2.3Ec-28_000150.2.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 210243..211871 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0001505UTR:Ec-28_000150.2Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_28 208059..208659 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000150.2CDS:Ec-28_000150.2Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_28 208660..208991 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0001503UTR:Ec-28_000150.2Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_28 210345..211871 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-28_000150.2 ID=Ec-28_000150.2|Name=Ec-28_000150.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=188bp
MRGQWSNDYGMHDYEYTPPPPKSGAVDLDSRPPPTCSASAVLAFGRSYAD
IPVSTFGGDECAMMDTAPPPPYSDERNTRFKLIPRVIGGPWMVRKAVGST
PVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELG
IVLQANSAQELPEALLGAVRLNGFGVEDPDLQTKLYQ*
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spliced messenger RNA

>Ec-28_000150.2 ID=Ec-28_000150.2|Name=Ec-28_000150.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2692bp|location=Sequence derived from alignment at chr_28:208059..211871+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
TAATCGCCCCCCCGATGTTTGCCATCGGGGTTGGGTTTTCGTCGCTTGGC
AACGACGTTGTAAAACAAGCCGCCCCCCCCGGTGTTTGCCATCGGGGTTG
GGTTTTCGTCGCTTGGCAACGACGTTGTAAAACAAGCCCCCCACTCGGTG
TTTGCCATCGGGATTGGGTTTTCGTCGCTTGGTAACGACGTTGTAAAAGA
AGCCAATTCACTTCGTGAACTCGGCAACCAGGTTACCGGTTTTTTTTTTT
TGGCGGTAACCATAATGGTGGTCGAGTAGATCATGTTGTGCGGGGTCGAG
AAACCTCACTCCGCGCAACGGGGGATGATCGCACCACGTTGTGTTAAAAT
GGTCAAGCTTCCTCGAGGCAGTTACACAGTGCTTACAACTGTCTCTGGAA
GTGAAAGCACCAGAAAATAAATTAAGTCATACGTAGCTGTCATCCGTACG
CAAGGAAGTAAGCACAAGATGCCGAACACCCTTAGCAGGATGCAGCTCAC
CCTTCATGCGACTCGCCAAATACCTCACGGTGCTTCGCGCTTGGTGATGT
GAGAGCCTGGTCCGGTGAGAACCCGGCGTGCTCCGTCCCGGCTTTGTAGG
GATGCGAGGTCAATGGTCAAACGACTACGGCATGCACGACTATGAGTACA
CCCCCCCCCCCCCTAAATCGGGTGCAGTGGACCTTGACTCTCGCCCGCCT
CCAACTTGCTCGGCCTCCGCTGTCCTTGCGTTTGGTCGCAGCTACGCTGA
CATTCCCGTGAGCACCTTCGGGGGAGACGAGTGCGCTATGATGGACACGG
CACCGCCCCCACCCTACTCCGACGAGCGCAACACCAGGTTTAAGCTCATT
CCCAGGGTTATTGGGGGACCGTGGATGGTGAGGAAAGCGGTAGGCTCCAC
GCCAGTCCTGCTGGGTACCAAGATCACTCACAGGTACTACCGAGGCGAGC
GCTACGTAGAAACGGACATGGACACCGGCTCTTCCCCCGCGGCGGCCAGC
TTGTGCGGCCGGTGCAGAGGGCTGAGTCGCAAGATTGACGTGGAGCTGGG
GATTGTGCTTCAGGCGAATTCCGCGCAAGAGCTTCCGGAGGCTCTGCTCG
GCGCCGTTCGACTCAACGGTTTCGGAGTGGAGGACCCTGACCTCCAGACC
AAGCTATACCAGTGAACCGTATATCTAGATATGGCACCATTCCATCCAAA
TAAAGTGTAGATACGGGCGTCCAATGCGCTTTTACGTCAACGTAAATCGG
GGTGTTAATTGTATGGTGTGGTCTCCTTCAGAGGCGGGTACACGGAATGG
TGTCCTTCGGTGGCTGGATGCGGCTAAGAAGTCCACTAAATGTAGCGGTT
GAGGGTAGGGAGTTGGTACAGCTGCATGACTCAGACGCTTGATAGACTCT
GACAGCAGCTGTTTTCTGGCTGCAACAGCAATCGTTTAGAGAAGCAATAG
AAGCCGTGGTGTTTTGGTGTATTATGCAAAACGCCCAGTGCGAATTGTAA
GAAATCATGCCTGGACGTATCCAAGCAAACAGAGTAATTAGTCGATACAA
GTGTGTTGCTTGTAGTATCTAGGTCGACCCGAGAGGAAGGGCAAAACAAA
GTGAGACGAACCACGAAACGGCAACCCGGCCAGGCTGGCTGCCGTTGAGC
CCCTTCCGCCATGTAGTTTTGTTGGAGGAACAACGGATCTTGGTCCAAAG
AACCGAGAGGGCATGTTGAAGCCGTGTTTCTGTGGCATTGACAGCGAGCC
GAGCACAACACGTTTTCGGTGGCGACAAACCCCGCCTTAGGTCTCCCTTG
ACGTTTAGAATTGCTTTCGACGCGAGGATACTCGACGGGAGGCAGAGGGA
ACTTGCGAGACCTTCACACAGCTTGCGGCACGCTCTGATATTCTTAGAGA
TGCCGCCTACGAGAGCATTCATCAAGATAGCTGCTCAGCGAAGACAACTA
AAATTTTCCCCTGGTTCCCAAACACACACCATCGCAAAGAAAGCCCGTGC
CGTCAAGGTCAATTCTCTAGCAACCCCACACCGACAACCGTCACACCCTG
CAGTTGTGGACACAGACGATTCCGCGCGCGATGATCGGTATTTTCCGACT
AAAAGTCTAGGCTTTGAACCCGCAAACACCGAGATCAATCCTCCATGTTT
TGGACAATGTGGATGTGGGTATCCATTTGATTCATGGCTTCTCTTTCGAC
GTACCCATGCTCCCGTCGAGCAAGTCCCTTGCACGACCGAGAGGCACTGC
AGTAGGGTAGTGTTTATCACTGACGCACGTCCGGGCTCTTTAAGCAAATG
AGTAGAACGCGGCCAACGCACGTGGCTGCAGCCACCACATTGCCCGCGTC
TACAGCAATTTCTGGGGACCAACAACCGCAAGCGATGTAGCACTGTTTCA
AAACTACAGCAAGACCAACTCAACGCCGAGAGCCAAATGATCCGAGCCCC
ACAACTTGTTGGGAATGGGTCCGAACTCGCCCCAGGCGGGCGGATCGGTC
GGGGAATGCTCTTCCTGCCGGTCAGGTGTGGGTTCCGGCCCACTTTGCTC
TAGGTCTTCTCCTGAGGATGTAGTTTCCCTTCCCTCCGTCAAGTGCGCTC
CTGGCGGGAACGCCAGTACACCTGATATTGCCAGGCCGCTATCCTTCTCC
CCGGTGGACACGAATATGTGGTCGATGATTCCGCTGAAGGAG
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protein sequence of Ec-28_000150.2

>Ec-28_000150.2 ID=Ec-28_000150.2|Name=Ec-28_000150.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=188bp
MRGQWSNDYGMHDYEYTPPPPKSGAVDLDSRPPPTCSASAVLAFGRSYAD
IPVSTFGGDECAMMDTAPPPPYSDERNTRFKLIPRVIGGPWMVRKAVGST
PVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELG
IVLQANSAQELPEALLGAVRLNGFGVEDPDLQTKLYQ*
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mRNA from alignment at chr_28:208059..211871+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-28_000150.2 ID=Ec-28_000150.2|Name=Ec-28_000150.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3813bp|location=Sequence derived from alignment at chr_28:208059..211871+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
TAATCGCCCCCCCGATGTTTGCCATCGGGGTTGGGTTTTCGTCGCTTGGC
AACGACGTTGTAAAACAAGCCGCCCCCCCCGGTGTTTGCCATCGGGGTTG
GGTTTTCGTCGCTTGGCAACGACGTTGTAAAACAAGCCCCCCACTCGGTG
TTTGCCATCGGGATTGGGTTTTCGTCGCTTGGTAACGACGTTGTAAAAGA
AGCCAATTCACTTCGTGAACTCGGCAACCAGGTTACCGGTTTTTTTTTTT
TGGCGGTAACCATAATGGTGGTCGAGTAGATCATGTTGTGCGGGGTCGAG
AAACCTCACTCCGCGCAACGGGGGATGATCGCACCACGTTGTGTTAAAAT
GGTCAAGCTTCCTCGAGGCAGTTACACAGTGCTTACAACTGTCTCTGGAA
GTGAAAGCACCAGAAAATAAATTAAGTCATACGTAGCTGTCATCCGTACG
CAAGGAAGTAAGCACAAGATGCCGAACACCCTTAGCAGGATGCAGCTCAC
CCTTCATGCGACTCGCCAAATACCTCACGGTGCTTCGCGCTTGGTGATGT
GAGAGCCTGGTCCGGTGAGAACCCGGCGTGCTCCGTCCCGGCTTTGTAGG
GATGCGAGGTCAATGGTCAAACGACTACGGCATGCACGACTATGAGTACA
CCCCCCCCCCCCCTAAATCGGGTGCAGTGGACCTTGACTCTCGCCCGCCT
CCAACTTGCTCGGCCTCCGCTGTCCTTGCGTTTGGTCGCAGCTACGCTGA
CATTCCCGTGAGCACCTTCGGGGGAGACGAGTGCGCTATGATGGACACGG
CACCGCCCCCACCCTACTCCGACGAGCGCAACACCAGGTTTAAGCTCATT
CCCAGGGTTATTGGGGGACCGTGGATGGTGAGGAAAGCGGTAGGCTCCAC
GCCAGTCCTGCTGGGTACCAAGATCACTCACAGGTGTGTTGCGTATCGCC
CTTGCGTTGACCCCTCTGCTGGGCGACGTATGTAGCGCATGCTGTTTGTC
GACGAAGAATTCGTTGGTAGAACCTGCGCCCCTACGAAACAAAACGATGG
CTGTTAAATTGAAAATCGTTTCACGCTACCGGTGGCATCCACCGAGCCCG
GAATGTCGAATGATTTCTTCCCGTTTCAGTAGTCACGTTTGATGTTGATG
CGGGGGTTGTTTGGATTGGTACTTTAGCTGGGTCATGTCCACGCCAAAGC
CGAACACGATGGTGCGTGCTGGCATGTTCCCTAGTCTGCAGCCCGTACCG
AGACGAATATTGGATGCGAGAATCGCGATCGTACTATCTCCTGCTAACGC
GCCCAGCCAAGGCAAAATGAAGTTGCTACAACATGCGTCCCGGCACACAA
CACAGCATTTGACTATAAGCTACAACCCGCGCTTGGGTTGGTTTTTGAGC
GCAGGTACTACCGAGGCGAGCGCTACGTAGAAACGGACATGGACACCGGC
TCTTCCCCCGCGGCGGCCAGCTTGTGCGGCCGGTGCAGAGGGCTGAGTCG
CAAGATTGACGTGGAGCTGGGGATTGTGCTTCAGGTGACACAAATCGAAC
CCAAACCGTTATACAACCTGTTGCACGGCGTTTTTGTAATGGCAGTTTGA
AGGTTCGCCGCGTTTGTGTACTCGAAAGTCGACGCAGGGTTGTCGTACTG
CTGGGTGGTGTCCGTGGCGGTGGGAATCTGTGCTGATCCCAGCAAGAGTT
TCCTCCTTCGACAACCTGTTGTGCTACGTATTAGTTCTGAATTATGGCCG
ACGGCACGATGCAATGCATAGTACCAGGGCGTCTCGCCTCGGGTGTTGCA
TTTTTTCACGCTTTTGTGATATCTCCGAACGTGTTTTTTTGTTGGTACGA
AGCAGTTGATTGGGTACTGAACGTTGTACTGGAGAACATGTTTCCCTTTT
TGTTCGTGCGTGTGGGATGCAGACGGTGCCCTTAATCTGGCTTTGCACGG
GTGCGGGGACAGCTTTCCCTGACTGTTCAAAATCCATCGAACATGACATC
ACGCCGGAAATGGTGGAGGAAGTAGCAGCCAGGTAGACATTCCAACGTTC
TTGAAGTGGAAACACACAGCAGCGCAAAGACAATATCGACGACGTTATCA
ACGACAATGGTAATGACGACGAAGACAATATCAATATCAACAACAACAGC
CACCCAACTGCGCTCCACTTTCTTTGTTCTTTAGGCGAATTCCGCGCAAG
AGCTTCCGGAGGCTCTGCTCGGCGCCGTTCGACTCAACGGTTTCGGAGTG
GAGGACCCTGACCTCCAGACCAAGCTATACCAGTGAACCGTATATCTAGA
TATGGCACCATTCCATCCAAATAAAGTGTAGATACGGGCGTCCAATGCGC
TTTTACGTCAACGTAAATCGGGGTGTTAATTGTATGGTGTGGTCTCCTTC
AGAGGCGGGTACACGGAATGGTGTCCTTCGGTGGCTGGATGCGGCTAAGA
AGTCCACTAAATGTAGCGGTTGAGGGTAGGGAGTTGGTACAGCTGCATGA
CTCAGACGCTTGATAGACTCTGACAGCAGCTGTTTTCTGGCTGCAACAGC
AATCGTTTAGAGAAGCAATAGAAGCCGTGGTGTTTTGGTGTATTATGCAA
AACGCCCAGTGCGAATTGTAAGAAATCATGCCTGGACGTATCCAAGCAAA
CAGAGTAATTAGTCGATACAAGTGTGTTGCTTGTAGTATCTAGGTCGACC
CGAGAGGAAGGGCAAAACAAAGTGAGACGAACCACGAAACGGCAACCCGG
CCAGGCTGGCTGCCGTTGAGCCCCTTCCGCCATGTAGTTTTGTTGGAGGA
ACAACGGATCTTGGTCCAAAGAACCGAGAGGGCATGTTGAAGCCGTGTTT
CTGTGGCATTGACAGCGAGCCGAGCACAACACGTTTTCGGTGGCGACAAA
CCCCGCCTTAGGTCTCCCTTGACGTTTAGAATTGCTTTCGACGCGAGGAT
ACTCGACGGGAGGCAGAGGGAACTTGCGAGACCTTCACACAGCTTGCGGC
ACGCTCTGATATTCTTAGAGATGCCGCCTACGAGAGCATTCATCAAGATA
GCTGCTCAGCGAAGACAACTAAAATTTTCCCCTGGTTCCCAAACACACAC
CATCGCAAAGAAAGCCCGTGCCGTCAAGGTCAATTCTCTAGCAACCCCAC
ACCGACAACCGTCACACCCTGCAGTTGTGGACACAGACGATTCCGCGCGC
GATGATCGGTATTTTCCGACTAAAAGTCTAGGCTTTGAACCCGCAAACAC
CGAGATCAATCCTCCATGTTTTGGACAATGTGGATGTGGGTATCCATTTG
ATTCATGGCTTCTCTTTCGACGTACCCATGCTCCCGTCGAGCAAGTCCCT
TGCACGACCGAGAGGCACTGCAGTAGGGTAGTGTTTATCACTGACGCACG
TCCGGGCTCTTTAAGCAAATGAGTAGAACGCGGCCAACGCACGTGGCTGC
AGCCACCACATTGCCCGCGTCTACAGCAATTTCTGGGGACCAACAACCGC
AAGCGATGTAGCACTGTTTCAAAACTACAGCAAGACCAACTCAACGCCGA
GAGCCAAATGATCCGAGCCCCACAACTTGTTGGGAATGGGTCCGAACTCG
CCCCAGGCGGGCGGATCGGTCGGGGAATGCTCTTCCTGCCGGTCAGGTGT
GGGTTCCGGCCCACTTTGCTCTAGGTCTTCTCCTGAGGATGTAGTTTCCC
TTCCCTCCGTCAAGTGCGCTCCTGGCGGGAACGCCAGTACACCTGATATT
GCCAGGCCGCTATCCTTCTCCCCGGTGGACACGAATATGTGGTCGATGAT
TCCGCTGAAGGAG
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Coding sequence (CDS) from alignment at chr_28:208059..211871+

>Ec-28_000150.2 ID=Ec-28_000150.2|Name=Ec-28_000150.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=564bp|location=Sequence derived from alignment at chr_28:208059..211871+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCGAGGTCAATGGTCAAACGACTACGGCATGCACGACTATGAGTACAC
CCCCCCCCCCCCTAAATCGGGTGCAGTGGACCTTGACTCTCGCCCGCCTC
CAACTTGCTCGGCCTCCGCTGTCCTTGCGTTTGGTCGCAGCTACGCTGAC
ATTCCCGTGAGCACCTTCGGGGGAGACGAGTGCGCTATGATGGACACGGC
ACCGCCCCCACCCTACTCCGACGAGCGCAACACCAGGTTTAAGCTCATTC
CCAGGGTTATTGGGGGACCGTGGATGGTGAGGAAAGCGGTAGGCTCCACG
CCAGTCCTGCTGGGTACCAAGATCACTCACAGGTACTACCGAGGCGAGCG
CTACGTAGAAACGGACATGGACACCGGCTCTTCCCCCGCGGCGGCCAGCT
TGTGCGGCCGGTGCAGAGGGCTGAGTCGCAAGATTGACGTGGAGCTGGGG
ATTGTGCTTCAGGCGAATTCCGCGCAAGAGCTTCCGGAGGCTCTGCTCGG
CGCCGTTCGACTCAACGGTTTCGGAGTGGAGGACCCTGACCTCCAGACCA
AGCTATACCAGTGA
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Synonyms
The feature 'Ec-28_000150.2' has the following synonyms
Synonym
Esi0120_0032
Esi_0120_0032